DSG2
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Also known as CDHF5
Summary
DSG2 (desmoglein 2, HGNC:3049) is a protein-coding gene on chromosome 18q12.1, encoding Desmoglein-2 (Q14126). A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion.
This gene encodes a member of the desmoglein family and cadherin cell adhesion molecule superfamily of proteins. Desmogleins are calcium-binding transmembrane glycoprotein components of desmosomes, cell-cell junctions between epithelial, myocardial, and other cell types. The encoded preproprotein is proteolytically processed to generate the mature glycoprotein. This gene is present in a gene cluster with other desmoglein gene family members on chromosome 18. Mutations in this gene have been associated with arrhythmogenic right ventricular dysplasia, familial, 10.
Source: NCBI Gene 1829 — RefSeq curated summary.
At a glance
- Gene–disease (curated): arrhythmogenic right ventricular cardiomyopathy (Definitive, ClinGen) — +3 more curated relationships
- GWAS associations: 1
- Clinical variants (ClinVar): 2,107 total — 58 pathogenic, 58 likely-pathogenic
- Phenotypes (HPO): 37
- Dosage sensitivity (ClinGen): haploinsufficiency emerging evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_001943
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3049 |
| Approved symbol | DSG2 |
| Name | desmoglein 2 |
| Location | 18q12.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CDHF5 |
| Ensembl gene | ENSG00000046604 |
| Ensembl biotype | protein_coding |
| OMIM | 125671 |
| Entrez | 1829 |
Gene structure
Transcript identifiers
Ensembl transcripts: 30 — 20 protein_coding, 7 nonsense_mediated_decay, 3 retained_intron
ENST00000261590, ENST00000585206, ENST00000682087, ENST00000682241, ENST00000683614, ENST00000683654, ENST00000684461, ENST00000713762, ENST00000713767, ENST00000713779, ENST00000713780, ENST00000713781, ENST00000713782, ENST00000713783, ENST00000713784, ENST00000713817, ENST00000713818, ENST00000713819, ENST00000713820, ENST00000713821, ENST00000713822, ENST00000713823, ENST00000713824, ENST00000713825, ENST00000713832, ENST00000713833, ENST00000713834, ENST00000713835, ENST00000713855, ENST00000856883
RefSeq mRNA: 1 — MANE Select: NM_001943
NM_001943
CCDS: CCDS42423
Canonical transcript exons
ENST00000261590 — 15 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000796930 | 31535270 | 31535412 |
| ENSE00000796931 | 31536202 | 31536429 |
| ENSE00000796932 | 31538751 | 31538978 |
| ENSE00000796933 | 31541193 | 31541314 |
| ENSE00000796934 | 31542520 | 31542852 |
| ENSE00000998595 | 31530987 | 31531252 |
| ENSE00001107962 | 31524703 | 31524888 |
| ENSE00001107968 | 31524448 | 31524585 |
| ENSE00004021170 | 31519803 | 31519937 |
| ENSE00004021172 | 31521099 | 31521243 |
| ENSE00004021174 | 31520803 | 31520964 |
| ENSE00004021175 | 31518239 | 31518274 |
| ENSE00004021176 | 31522083 | 31522249 |
| ENSE00004021508 | 31498177 | 31498296 |
| ENSE00004021510 | 31545721 | 31549008 |
Expression profiles
Bgee: expression breadth ubiquitous, 238 present calls, max score 99.62.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 15.2875 / max 373.2776, expressed in 1137 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 169824 | 12.1440 | 1116 |
| 169823 | 2.1034 | 491 |
| 169819 | 0.4700 | 222 |
| 169821 | 0.2727 | 136 |
| 169820 | 0.1881 | 92 |
| 169822 | 0.1093 | 46 |
Top tissues by expression
285 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of sigmoid colon | UBERON:0004993 | 99.62 | gold quality |
| colonic mucosa | UBERON:0000317 | 99.27 | gold quality |
| jejunal mucosa | UBERON:0000399 | 99.14 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 98.76 | gold quality |
| parotid gland | UBERON:0001831 | 98.35 | gold quality |
| hair follicle | UBERON:0002073 | 98.03 | gold quality |
| rectum | UBERON:0001052 | 97.81 | gold quality |
| mammary duct | UBERON:0001765 | 97.38 | gold quality |
| choroid plexus epithelium | UBERON:0003911 | 97.36 | gold quality |
| epithelium of mammary gland | UBERON:0003244 | 97.27 | gold quality |
| duodenum | UBERON:0002114 | 97.12 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 97.10 | gold quality |
| amniotic fluid | UBERON:0000173 | 96.67 | gold quality |
| parietal pleura | UBERON:0002400 | 95.69 | gold quality |
| caput epididymis | UBERON:0004358 | 95.53 | gold quality |
| corpus epididymis | UBERON:0004359 | 95.07 | gold quality |
| islet of Langerhans | UBERON:0000006 | 95.01 | gold quality |
| thoracic mammary gland | UBERON:0005200 | 94.55 | gold quality |
| mammary gland | UBERON:0001911 | 94.46 | gold quality |
| nephron tubule | UBERON:0001231 | 94.23 | gold quality |
| pleura | UBERON:0000977 | 93.78 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 93.63 | gold quality |
| bronchial epithelial cell | CL:0002328 | 93.02 | gold quality |
| cartilage tissue | UBERON:0002418 | 93.02 | gold quality |
| gall bladder | UBERON:0002110 | 92.86 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 92.73 | gold quality |
| heart right ventricle | UBERON:0002080 | 92.71 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 92.40 | gold quality |
| placenta | UBERON:0001987 | 92.38 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 91.67 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-8530 | yes | 676.41 |
| E-MTAB-6678 | yes | 16.35 |
| E-GEOD-124858 | no | 35.76 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HNF1A, SNAI1
miRNA regulators (miRDB)
124 targeting DSG2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-4682 | 100.00 | 68.89 | 1258 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-499A-5P | 99.98 | 70.79 | 1323 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-144-3P | 99.94 | 73.98 | 2698 |
| HSA-MIR-539-5P | 99.93 | 70.30 | 2855 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-12133 | 99.92 | 71.82 | 2006 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
Functional genomics
ClinGen dosage: haploinsufficiency 2 (emerging evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Desmoglein 2 was highly expressed by the least differentiated cells of the cutaneous epithelium, including the hair follicle bulge of the fetus and adult, bulb matrix cells, and basal layer of the outer root sheath. (PMID:12787134)
- Nine heterozygous DSG2 mutations (5 missense, 2 insertion-deletions, 1 nonsense, and 1 splice site mutation) were detected in subjects with ARVC. (PMID:16505173)
- mutations in DSG2 contribute to the development ofarrhythmogenic right ventricular dysplasia/cardiomyopathy (PMID:16773573)
- Data demonstrate that UV-induced desmoglein-2 down-regulation is mediated via reactive oxygen species which are generated through EGF receptor activation and Rac2/NADPH oxidase activation. (PMID:16820949)
- Mutations in DSG2 display a high degree of penetrance. Disease expression was of variable severity with left ventricular involvement a prominent feature. (PMID:17105751)
- long term treatment with epidermal growth factor (EGF) leads to a marked increase in the levels of ADAM17, which also increases the shedding of several substrates of ADAM17, including the desmosomal cadherin Dsg-2 (PMID:17227756)
- desmoglein 2 is a novel solitary surface glycoprotein in malignant melanoma cells (PMID:17495963)
- Dsg2 was targeted by caspases in cell lines undergoing staurosporine-induced apoptosis. The proteolytic processing of full-length Dsg2 released a 70-kDa fragment into the cytosol. (PMID:17559062)
- Dsg2 regulates intestinal epithelial cell apoptosis driven by cysteine proteases during physiological differentiation and inflammation (PMID:17804817)
- Mutations in the desmosome genes were identified in four of the five patients (three with a DSG2 mutation and one with a DSP mutation). Five gene mutations were noted in four patients and all mutations were novel (one patient had a DSG2 double mutation). (PMID:18632414)
- DSG2-V55M polymorphism is identified as a novel risk variant for dilated cardiomyopathy. (PMID:18678517)
- Monoclonal antibodies against the proregion of the desmosomal cadherin, human desmoglein-2. (PMID:18707543)
- Desmoglein 2 has been demonstrated in a sizable subset of nevi and primary melanomas. (PMID:18975006)
- Results show that epidermal growth factor receptor inhibition stabilizes desmoglein 2 at intercellular junctions by interfering with its accumulation in an internalized cytoplasmic pool. (PMID:18987342)
- levels of Dsg1 & Dsg2 are reduced in pancreatic tumors; expression of kallikrein 7 in BxPC-3 cells resulted in increase in shedding of soluble Dsg2 (PMID:19091121)
- While Dsg2 expression was consistently strong in BCC, it varied in SCC with a minor correlation between a decrease of Dsg2 expression and tumor differentiation (PMID:19458482)
- Mutations in DSG2 and DSC2 are less prevalent than PKP2 mutations in Dutch arrhythmogenic right ventricular dysplasia/cardiomypath patients. (PMID:20031616)
- Dsg2-mediated adhesion affects tight junction integrity and is required to maintain intestinal epithelial barrier properties (PMID:20224006)
- Co-segregation of the G812S mutation with disease expression was established in a large Caucasian family.No differences in targeting or stability of the mutant proteins, suggesting that they act via a dominant negative mechanism (PMID:20708101)
- Studies identified two mutations in DSG2, four in DSC2, two in DSP, four in JUP and seven in PKP2. (PMID:20864495)
- Study demonstrated a molecular switching in gene expression within the desmoglein subfamily between DSG3 and DSG2 during oral cancer progression. (PMID:20923451)
- We detected a novel mutation: DSG2 3059_3062delAGAG and it may induce disintegrationofthe desmosomal structure (PMID:21397041)
- Dsg2 extracellular and intracellular domains are cleaved by proteolytic enzymes, and multiple cleavage fragments of Dsg2 are generated in colonic epithelial cells. (PMID:21715983)
- The Dsg2 exhibit microtubule-dependent transport in epithelial cells but use distinct motors to traffic to the plasma membrane. (PMID:22184201)
- Desmoglein 2, expressed earliest among the four isoforms in development, was found to be mutated in arrythmogenic right ventricular cardiomyopathy and is a receptor for a subset of adenoviruses that cause respiratory and urinary tract infections. (PMID:22189787)
- Induced gene expression levels of plakoglobin, desmoglein-1 and desmoglein-2 correlated significantly with dilatation of intercellular spaces and basal cell hyperplasia in esophageal mucosa of patients with gastro-oesophageal reflux disease. (PMID:22276604)
- Gastroesophageal reflux disease was specifically associated with elevated transcript levels of desmoglein 2 and plakoglobin (PMID:22521077)
- Dsg-2 with a mutation at the predicted cleavage site is resistant to cleavage by matriptase. Thus Dsg-2 seems to be a functionally relevant physiological substrate of matriptase. (PMID:22783993)
- an impaired prodomain cleavage and an influence on the DSG2-properties could be demonstrated for the R46Q-variant leading to the classification of the variant as a potential gain-of-function mutant in arrhythmogenic right ventricular cardiomyopathy (PMID:23071725)
- The Dsg unique region(DUR) of Dsg2 stabilized Dsg2 at the cell surface by inhibiting its internalization and promoted strong intercellular adhesion. (PMID:23128240)
- Snail regulates levels of E-cadherin and desmoglein 2 in oral squamous cell carcinoma cells both transcriptionally and post-translationally. (PMID:23261431)
- CD133 interacts with plakoglobin and knockdown of CD133 by RNA interference (RNAi) results in the downregulation of desmoglein-2. (PMID:23326490)
- Specific desmosomal cadherins contribute differently to keratinocyte cohesion and that Dsg2 compared to Dsg3 is less important in this context. (PMID:23326495)
- findings were consistent with the results obtained by immunohistochemistry of endomyocardial biopsies and epidermal tissue of mutation carriers, which indicated a normal cellular distribution of DSG2 (PMID:23381804)
- Desmoglein-2 co-localizes with integrin-beta8 in N-MVECs. (PMID:23874518)
- Authors found a number of mutations within or near the EF loop of the Ad3 fiber knob that resulted in affinities to DSG2 that were several orders of magnitude higher than those to the wild-type Ad3 knob. (PMID:23946456)
- Reduced cardiac desmoglein-2 and desmocollin-2 levels appear to be specifically associated with Arrhythmogenic right ventricular Dysplasia/cardiomyopathy, independent of underlying mutations. (PMID:24086444)
- Data demonstrate that partner desmosomal cadherins Dsg2 and Dsc2 play opposing roles in controlling colonic carcinoma cell proliferation through differential effects on EGFR signaling. (PMID:24166502)
- Desmoglein 2 expression attenuates migration of melanoma cells, mediated by downregulation of secretogranin II. (PMID:24558503)
- Gal3 has a role in stabilizing desmoglein-2, a desmosomal cadherin, and intercellular adhesion in intestinal epithelial cells (PMID:24567334)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | si:ch73-74h11.1 | ENSDARG00000062750 |
| mus_musculus | Dsg2 | ENSMUSG00000044393 |
| rattus_norvegicus | Dsg2 | ENSRNOG00000016526 |
Paralogs (6): DSC2 (ENSG00000134755), DSG3 (ENSG00000134757), DSG1 (ENSG00000134760), DSC3 (ENSG00000134762), DSC1 (ENSG00000134765), DSG4 (ENSG00000175065)
Protein
Protein identifiers
Desmoglein-2 — Q14126 (reviewed: Q14126)
Alternative names: Cadherin family member 5, HDGC
All UniProt accessions (22): A0A804HIA2, A0A804HJQ3, Q14126, A0AAQ5BGT2, A0AAQ5BGU9, A0AAQ5BGV7, A0AAQ5BGW0, A0AAQ5BGX2, A0AAQ5BGX5, A0AAQ5BGX8, A0AAQ5BGY9, A0AAQ5BGZ0, A0AAQ5BGZ7, A0AAQ5BGZ9, A0AAQ5BH00, A0AAQ5BH03, A0AAQ5BH06, A0AAQ5BH09, A0AAQ5BH19, A0AAQ5BH29, A0AAQ5BH32, J3KSI6
UniProt curated annotations — full annotation on UniProt →
Function. A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. Required for proliferation and viability of embryonic stem cells in the blastocyst, thereby crucial for progression of post-implantation embryonic development. Maintains pluripotency by regulating epithelial to mesenchymal transition/mesenchymal to epithelial transition (EMT/MET) via interacting with and sequestering CTNNB1 to sites of cell-cell contact, thereby reducing translocation of CTNNB1 to the nucleus and subsequent transcription of CTNNB1/TCF-target genes. Promotes pluripotency and the multi-lineage differentiation potential of hematopoietic stem cells. Plays a role in endothelial cell sprouting and elongation via mediating the junctional-association of cortical actin fibers and CDH5. Promotes cardiomyocyte cell homeostasis and desmosome junction formation at intercalated disks, as a result plays a role in the maintenance of cardiac conduction and heart chamber integrity. Positively regulates pancreatic islet development and maintenance of endothelial cell barrier integrity in the pancreas, therefore involved in the controlled release of insulin from islet cells into the circulation in response to glucose. Plays a role in limiting inflammatory infiltration and the apoptotic response to injury in kidney tubular epithelial cells, potentially via its role in maintaining cell-cell adhesion and the epithelial barrier. Acts as a positive modulator of CSK and EGFR activation via sequestering them away from lipid rafts, this is independent of its role in desmosome cell junctions. Also disrupts the localization of CAV1 to lipid rafts resulting in its distribution throughout the cytoplasm.
Subunit / interactions. Forms homodimers. Interacts with PKP2. Interacts with CTNNB1; the interaction promotes localization of CTNNB1 at cell junctions thus reducing its nuclear localization and subsequent transcription of CTNNB1/TCF-target genes.
Subcellular location. Cell membrane. Cell junction. Desmosome. Cytoplasm.
Tissue specificity. Expressed in undifferentiated pluripotent stem cells, expression decreases during differentiation (at protein level). Expressed in hematopoietic stem cells and circulating endothelial progenitor cells, expression decreases upon increasing cell lineage commitment (at protein level). Expressed on common myeloid progenitors, pro-myelocytes, pro-erythrocytes and B-cell linage progenitors (at protein level). Expression in mature cell types in the bone marrow and mature leukocyte populations is absent. Expressed by foreskin fibroblasts, expression peaks during the early stage of differentiation reprogramming (at protein level). Expressed by endothelial cells in both arterioles and venules in the cervix (at protein level). Expressed in pancreatic alpha-cells, beta-cells and exocrine tissue (at protein level). Expressed in cardiomyocytes (at protein level). Expressed in kidney tubular epithelial cells.
Post-translational modifications. Cleaved by CASP3 in response to apoptosis which results in a loss of full length DSG2 at cell-cell adhesion junctions and a decrease in intercellular adhesion. N-glycosylated; promotes localization to the plasma membrane and cell-cell adhesion junction strength. Palmitoylated by ZDHHC5 at the plasma membrane.
Disease relevance. Arrhythmogenic right ventricular dysplasia, familial, 10 (ARVD10) [MIM:610193] A congenital heart disease characterized by infiltration of adipose and fibrous tissue into the right ventricle and loss of myocardial cells, resulting in ventricular and supraventricular arrhythmias. The disease is caused by variants affecting the gene represented in this entry. Cardiomyopathy, dilated, 1BB (CMD1BB) [MIM:612877] A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. Disease susceptibility is associated with variants affecting the gene represented in this entry.
Domain organisation. Three calcium ions are usually bound at the interface of each cadherin domain and rigidify the connections, imparting a strong curvature to the full-length ectodomain.
RefSeq proteins (1): NP_001934* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002126 | Cadherin-like_dom | Domain |
| IPR009122 | Desmosomal_cadherin | Family |
| IPR015919 | Cadherin-like_sf | Homologous_superfamily |
| IPR020894 | Cadherin_CS | Conserved_site |
| IPR027397 | Catenin-bd_sf | Homologous_superfamily |
| IPR050971 | Cadherin-domain_protein | Family |
Pfam: PF00028
UniProt features (130 total): strand 42, sequence variant 27, turn 14, modified residue 11, mutagenesis site 7, repeat 6, glycosylation site 5, domain 4, sequence conflict 3, helix 2, compositionally biased region 2, topological domain 2, signal peptide 1, propeptide 1, region of interest 1, chain 1, transmembrane region 1
Structure
Experimental structures (PDB)
12 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5ERD | X-RAY DIFFRACTION | 2.9 |
| 7AGF | ELECTRON MICROSCOPY | 3.1 |
| 8QK3 | ELECTRON MICROSCOPY | 3.2 |
| 5J5J | X-RAY DIFFRACTION | 3.29 |
| 7AGG | ELECTRON MICROSCOPY | 3.3 |
| 8QJX | ELECTRON MICROSCOPY | 3.3 |
| 6QNT | ELECTRON MICROSCOPY | 3.5 |
| 8QJY | ELECTRON MICROSCOPY | 3.5 |
| 6QNU | ELECTRON MICROSCOPY | 3.8 |
| 6SIT | X-RAY DIFFRACTION | 4.5 |
| 7A7D | ELECTRON MICROSCOPY | 26 |
| 2YQG | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q14126-F1 | 65.27 | 0.43 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (11): 680, 700, 703, 723, 726, 804, 806, 810, 815, 922, 1118
Glycosylation sites (5): 112, 182, 309, 462, 514
Mutagenesis-validated functional residues (7):
| Position | Phenotype |
|---|---|
| 112 | abolishes glycosylation, reduces localization to the plasma membrane. |
| 154 | abolishes glycosylation. increases size of glycosylation at asn-182. increase in cell-cell adhesion strength. |
| 182 | abolishes glycosylation, reduces localization to the plasma membrane. |
| 187 | increase in cell-cell adhesion strength. |
| 309 | abolishes glycosylation. |
| 462 | abolishes glycosylation, reduces localization to the plasma membrane. |
| 514 | abolishes glycosylation, reduces localization to the plasma membrane. |
Function
Pathways and Gene Ontology
Reactome pathways
6 pathways
| ID | Pathway |
|---|---|
| R-HSA-351906 | Apoptotic cleavage of cell adhesion proteins |
| R-HSA-6805567 | Keratinization |
| R-HSA-6809371 | Formation of the cornified envelope |
| R-HSA-9013404 | RAC2 GTPase cycle |
| R-HSA-9013408 | RHOG GTPase cycle |
| R-HSA-9013423 | RAC3 GTPase cycle |
MSigDB gene sets: 402 (showing top):
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_BUNDLE_OF_HIS_CELL_TO_PURKINJE_MYOCYTE_COMMUNICATION, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_INFLAMMATORY_RESPONSE, GOBP_MESENCHYMAL_TO_EPITHELIAL_TRANSITION, AREB6_03, GOBP_POSITIVE_REGULATION_OF_VASCULATURE_DEVELOPMENT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, GOBP_POSITIVE_REGULATION_OF_PROTEIN_LOCALIZATION, GOBP_REGULATION_OF_ENDOTHELIAL_CELL_DIFFERENTIATION, GOCC_CELL_SURFACE, GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_TO_MESENCHYMAL_TRANSITION
GO Biological Process (20): desmosome organization (GO:0002934), Purkinje myocyte development (GO:0003165), cell adhesion (GO:0007155), homophilic cell-cell adhesion (GO:0007156), negative regulation of epithelial to mesenchymal transition (GO:0010719), response to progesterone (GO:0032570), negative regulation of apoptotic process (GO:0043066), negative regulation of endothelial cell differentiation (GO:0045602), positive regulation of cell adhesion (GO:0045785), maternal process involved in female pregnancy (GO:0060135), mesenchymal to epithelial transition (GO:0060231), stem cell proliferation (GO:0072089), bundle of His cell-Purkinje myocyte adhesion involved in cell communication (GO:0086073), regulation of heart rate by cardiac conduction (GO:0086091), cell-cell adhesion (GO:0098609), regulation of ventricular cardiac muscle cell action potential (GO:0098911), negative regulation of inflammatory response to wounding (GO:0106015), positive regulation of protein localization to cell-cell junction (GO:0150107), positive regulation of stem cell population maintenance (GO:1902459), positive regulation of sprouting angiogenesis (GO:1903672)
GO Molecular Function (5): calcium ion binding (GO:0005509), cell adhesion molecule binding (GO:0050839), cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication (GO:0086083), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (13): cornified envelope (GO:0001533), cytoplasm (GO:0005737), plasma membrane (GO:0005886), cell-cell junction (GO:0005911), cell surface (GO:0009986), intercalated disc (GO:0014704), apical plasma membrane (GO:0016324), lateral plasma membrane (GO:0016328), cell junction (GO:0030054), desmosome (GO:0030057), extracellular exosome (GO:0070062), membrane (GO:0016020), anchoring junction (GO:0070161)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| RHO GTPase cycle | 3 |
| Apoptotic cleavage of cellular proteins | 1 |
| Developmental Biology | 1 |
| Keratinization | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| cell adhesion | 2 |
| plasma membrane | 2 |
| cell-cell junction organization | 1 |
| His-Purkinje system development | 1 |
| ventricular cardiac muscle tissue development | 1 |
| cellular process | 1 |
| cell-cell adhesion | 1 |
| epithelial to mesenchymal transition | 1 |
| regulation of epithelial to mesenchymal transition | 1 |
| negative regulation of cell differentiation | 1 |
| negative regulation of multicellular organismal process | 1 |
| response to steroid hormone | 1 |
| response to ketone | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| negative regulation of epithelial cell differentiation | 1 |
| endothelial cell differentiation | 1 |
| regulation of endothelial cell differentiation | 1 |
| regulation of cell adhesion | 1 |
| positive regulation of cellular process | 1 |
| female pregnancy | 1 |
| multicellular organismal reproductive process | 1 |
| epithelial cell differentiation | 1 |
| cell population proliferation | 1 |
| stem cell division | 1 |
| heterotypic cell-cell adhesion | 1 |
| cardiac muscle cell-cardiac muscle cell adhesion | 1 |
| bundle of His cell to Purkinje myocyte communication | 1 |
| regulation of heart rate | 1 |
| cardiac conduction | 1 |
| regulation of cardiac muscle cell contraction | 1 |
| ventricular cardiac muscle cell action potential | 1 |
| regulation of cardiac muscle cell action potential | 1 |
| negative regulation of inflammatory response | 1 |
| inflammatory response to wounding | 1 |
| regulation of inflammatory response to wounding | 1 |
| negative regulation of response to wounding | 1 |
| protein localization to cell-cell junction | 1 |
Protein interactions and networks
STRING
1480 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DSG2 | PKP2 | Q99959 | 998 |
| DSG2 | DSP | P15924 | 995 |
| DSG2 | DSC2 | Q02487 | 987 |
| DSG2 | JUP | P14923 | 978 |
| DSG2 | TMEM43 | Q9BTV4 | 924 |
| DSG2 | DSC3 | Q14574 | 914 |
| DSG2 | GJA1 | P17302 | 822 |
| DSG2 | TGFB3 | P10600 | 804 |
| DSG2 | SCN5A | Q14524 | 768 |
| DSG2 | CD46 | P15529 | 766 |
| DSG2 | RYR2 | Q92736 | 764 |
| DSG2 | PKP1 | Q13835 | 763 |
| DSG2 | MYBPC3 | Q14896 | 762 |
| DSG2 | RBM20 | Q5T481 | 756 |
| DSG2 | PKP3 | Q9Y446 | 752 |
IntAct
196 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| NCBP2 | KPNA3 | psi-mi:“MI:0914”(association) | 0.640 |
| PAK5 | AURKA | psi-mi:“MI:0914”(association) | 0.640 |
| YWHAG | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.640 |
| DSC2 | DSG2 | psi-mi:“MI:0407”(direct interaction) | 0.610 |
| DSG2 | DSC2 | psi-mi:“MI:0915”(physical association) | 0.610 |
| TUBB3 | POTEF | psi-mi:“MI:0914”(association) | 0.530 |
| ARRDC4 | WWP2 | psi-mi:“MI:0914”(association) | 0.530 |
| RPN1 | APBB1 | psi-mi:“MI:0914”(association) | 0.530 |
| SPSB2 | ARHGEF10 | psi-mi:“MI:0914”(association) | 0.530 |
| LPAR1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.530 |
| SPSB4 | ARHGEF10 | psi-mi:“MI:0914”(association) | 0.530 |
| CFTR | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.480 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| DSG2 | DSC3 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| DSC1 | DSG2 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| LTK | PIK3R2 | psi-mi:“MI:0914”(association) | 0.420 |
| Cbx1 | FLOT1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Trim69 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| ERBB2 | DSG2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| TGFBR2 | DSG2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| DSG2 | JUP | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (357): DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Proximity Label-MS), DSG2 (Proximity Label-MS), DSG2 (Proximity Label-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS), DSG2 (Affinity Capture-MS)
ESM2 similar proteins: A0A8M2BIB6, F1QSQ0, F8W3X3, H2EQR6, O35902, O54800, O55111, O93319, P32926, P33545, P55280, P55285, P55286, P55287, P55288, P55289, P55292, P55849, P55850, P70407, P70408, P79995, P97291, P97326, Q01107, Q02413, Q02487, Q08554, Q08DJ5, Q13634, Q14126, Q14574, Q28060, Q3SWX5, Q5DWV1, Q5RJH3, Q61495, Q68SP4, Q6W3B0, Q7TMD7
Diamond homologs: A0A8M2BIB6, B0KW95, B2KI42, B4USZ0, F1PAA9, H2EQR6, O18926, O35902, O55075, O55111, O88277, P08641, P09803, P10287, P10288, P12830, P15116, P19022, P19534, P19535, P20310, P22223, P24503, P30944, P32926, P33145, P33146, P33147, P33148, P33150, P33152, P33545, P39038, P55283, P55290, P55291, P55292, P55849, P55850, P79883
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 226 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 6 | 30.1× | 3e-06 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 6 | 26.5× | 5e-06 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 6 | 26.5× | 5e-06 |
| Signaling by ERBB2 ECD mutants | 5 | 22.1× | 7e-05 |
| GRB2 events in ERBB2 signaling | 5 | 20.9× | 8e-05 |
| Regulation of CDH1 posttranslational processing and trafficking to plasma membrane | 9 | 19.9× | 1e-07 |
| Activation of BH3-only proteins | 6 | 19.6× | 2e-05 |
| PD-L1(CD274) glycosylation and translocation to plasma membrane | 5 | 17.1× | 2e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| obsolete protein N-linked glycosylation via asparagine | 5 | 17.8× | 2e-03 |
| peptidyl-tyrosine phosphorylation | 7 | 15.6× | 4e-04 |
| positive regulation of protein import into nucleus | 6 | 13.4× | 2e-03 |
| platelet aggregation | 6 | 10.7× | 4e-03 |
| protein N-linked glycosylation | 6 | 8.4× | 8e-03 |
| neuron apoptotic process | 8 | 7.8× | 2e-03 |
| cell surface receptor protein tyrosine kinase signaling pathway | 8 | 7.3× | 3e-03 |
| positive regulation of neuron projection development | 10 | 7.2× | 6e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
2107 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 58 |
| Likely pathogenic | 58 |
| Uncertain significance | 1118 |
| Likely benign | 554 |
| Benign | 46 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1075406 | NM_001943.5(DSG2):c.676_680del (p.Thr226fs) | Pathogenic |
| 1075858 | NM_001943.5(DSG2):c.2480_2712del (p.Asp827fs) | Pathogenic |
| 1075931 | NM_001943.5(DSG2):c.1672C>T (p.Gln558Ter) | Pathogenic |
| 1353815 | NM_001943.5(DSG2):c.1705C>T (p.Gln569Ter) | Pathogenic |
| 1387457 | NM_001943.5(DSG2):c.613_658dup (p.Ile220delinsThrCysLeuSerSerSerValLeuProLysTer) | Pathogenic |
| 1427568 | NM_001943.5(DSG2):c.527_533del (p.Thr176fs) | Pathogenic |
| 1455568 | NM_001943.5(DSG2):c.27C>A (p.Tyr9Ter) | Pathogenic |
| 1456782 | NM_001943.5(DSG2):c.423del (p.Lys141fs) | Pathogenic |
| 1459522 | NM_001943.5(DSG2):c.917G>A (p.Trp306Ter) | Pathogenic |
| 1459763 | NC_000018.9:g.(?29115223)(29118951_?)del | Pathogenic |
| 1459814 | NM_001943.5(DSG2):c.909del (p.Asp304fs) | Pathogenic |
| 1693197 | NM_001943.5(DSG2):c.1919_1932del (p.Gly640fs) | Pathogenic |
| 1752786 | NM_001943.5(DSG2):c.630del (p.Phe211fs) | Pathogenic |
| 199800 | NM_001943.5(DSG2):c.769C>T (p.Gln257Ter) | Pathogenic |
| 199823 | NM_001943.5(DSG2):c.601_605del (p.Val201fs) | Pathogenic |
| 199831 | NM_001943.5(DSG2):c.2372_2373del (p.Thr791fs) | Pathogenic |
| 2024795 | NM_001943.5(DSG2):c.1759dup (p.Thr587fs) | Pathogenic |
| 2093339 | NM_001943.5(DSG2):c.912_941delinsAATTGGCTGGCAAATTTTACATTTGAAATGAAGGAGGTTATTTCCTTCATTTGAATTGGCTGGCAAATTTTACATTTGAAATGA (p.Asp304_Ser314delinsGluIleGlyTrpGlnIleLeuHisLeuLysTer) | Pathogenic |
| 2110919 | NM_001943.5(DSG2):c.361G>T (p.Glu121Ter) | Pathogenic |
| 2118301 | NM_001943.5(DSG2):c.290del (p.Pro97fs) | Pathogenic |
| 2424328 | NC_000018.9:g.(?29115213)(29126706_?)del | Pathogenic |
| 2448369 | NM_001943.5(DSG2):c.449_450del (p.Leu150fs) | Pathogenic |
| 2563311 | NM_001943.5(DSG2):c.1970G>A (p.Trp657Ter) | Pathogenic |
| 2572599 | NM_001943.5(DSG2):c.382del (p.Thr128fs) | Pathogenic |
| 2692970 | NM_001943.5(DSG2):c.1689del (p.Arg565fs) | Pathogenic |
| 2746733 | NM_001943.5(DSG2):c.498del (p.Ser167fs) | Pathogenic |
| 2754845 | NM_001943.5(DSG2):c.2321del (p.Asn774fs) | Pathogenic |
| 2826490 | NM_001943.5(DSG2):c.505G>T (p.Glu169Ter) | Pathogenic |
| 2828585 | NM_001943.5(DSG2):c.11_12insGCGAGGGTGCGATGGCACGGAG (p.Ser4fs) | Pathogenic |
| 3027046 | NM_001943.5(DSG2):c.1404del (p.Ile469fs) | Pathogenic |
SpliceAI
2106 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 18:31519798:TATA:T | acceptor_loss | 1.0000 |
| 18:31519933:CCAAG:C | donor_loss | 1.0000 |
| 18:31519936:AGGT:A | donor_loss | 1.0000 |
| 18:31519938:G:GC | donor_loss | 1.0000 |
| 18:31520802:GATAC:G | acceptor_gain | 1.0000 |
| 18:31520964:GGTAA:G | donor_loss | 1.0000 |
| 18:31520965:G:GG | donor_gain | 1.0000 |
| 18:31520965:GTAAG:G | donor_loss | 1.0000 |
| 18:31520966:T:A | donor_loss | 1.0000 |
| 18:31521090:T:TA | acceptor_gain | 1.0000 |
| 18:31521094:TTCA:T | acceptor_loss | 1.0000 |
| 18:31521097:A:AG | acceptor_gain | 1.0000 |
| 18:31521097:A:AT | acceptor_loss | 1.0000 |
| 18:31521098:G:GA | acceptor_gain | 1.0000 |
| 18:31521098:GC:G | acceptor_gain | 1.0000 |
| 18:31521098:GCT:G | acceptor_gain | 1.0000 |
| 18:31521098:GCTA:G | acceptor_gain | 1.0000 |
| 18:31521098:GCTAA:G | acceptor_gain | 1.0000 |
| 18:31521204:G:GT | donor_gain | 1.0000 |
| 18:31521231:T:G | donor_gain | 1.0000 |
| 18:31521240:GCAC:G | donor_gain | 1.0000 |
| 18:31521241:CAC:C | donor_gain | 1.0000 |
| 18:31521241:CACG:C | donor_loss | 1.0000 |
| 18:31521242:AC:A | donor_gain | 1.0000 |
| 18:31521242:ACGTA:A | donor_loss | 1.0000 |
| 18:31521243:CG:C | donor_loss | 1.0000 |
| 18:31521244:G:GG | donor_gain | 1.0000 |
| 18:31521244:GTAAG:G | donor_loss | 1.0000 |
| 18:31521245:T:G | donor_loss | 1.0000 |
| 18:31522075:A:AG | acceptor_gain | 1.0000 |
AlphaMissense
7353 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 18:31520918:T:C | L111P | 0.998 |
| 18:31520942:G:C | R119P | 0.997 |
| 18:31521196:T:C | F159S | 0.997 |
| 18:31524555:T:A | N266K | 0.997 |
| 18:31524555:T:G | N266K | 0.997 |
| 18:31519872:T:A | W51R | 0.996 |
| 18:31519872:T:C | W51R | 0.996 |
| 18:31519874:G:C | W51C | 0.996 |
| 18:31519874:G:T | W51C | 0.996 |
| 18:31521181:A:C | D154A | 0.996 |
| 18:31520945:A:T | E120V | 0.995 |
| 18:31524473:T:A | V239E | 0.995 |
| 18:31524530:T:A | V258D | 0.995 |
| 18:31524557:A:C | D267A | 0.995 |
| 18:31521112:C:A | A131D | 0.994 |
| 18:31521154:T:C | L145P | 0.994 |
| 18:31521171:G:C | D151H | 0.994 |
| 18:31521172:A:T | D151V | 0.994 |
| 18:31521181:A:T | D154V | 0.994 |
| 18:31522107:C:A | A183E | 0.994 |
| 18:31522118:G:C | D187H | 0.994 |
| 18:31519932:G:C | A71P | 0.993 |
| 18:31520891:T:C | F102S | 0.993 |
| 18:31521173:T:A | D151E | 0.993 |
| 18:31521173:T:G | D151E | 0.993 |
| 18:31522119:A:C | D187A | 0.993 |
| 18:31531033:T:A | V354D | 0.993 |
| 18:31536410:G:C | W544C | 0.993 |
| 18:31536410:G:T | W544C | 0.993 |
| 18:31520912:G:T | G109V | 0.992 |
dbSNP variants (sampled 300 via entrez): RS1000057064 (18:31523386 G>A), RS1000075976 (18:31544243 C>A), RS1000138772 (18:31503106 C>T), RS1000224809 (18:31525616 A>G), RS1000253943 (18:31545890 C>T), RS1000317097 (18:31513441 C>T), RS1000357840 (18:31506168 G>C), RS1000360589 (18:31513191 G>A), RS1000378231 (18:31519726 A>G), RS1000398725 (18:31500589 A>G), RS1000497213 (18:31517683 T>A), RS1000571412 (18:31508148 T>C), RS1000591634 (18:31547213 A>C,G), RS1000611519 (18:31519332 G>A,C), RS1000686240 (18:31547428 G>A,C)
Disease associations
OMIM: gene MIM:125671 | disease phenotypes: MIM:610193, MIM:612877, MIM:609040, MIM:600996, MIM:604772, MIM:192600, MIM:107970, MIM:105210, MIM:618300, MIM:115200
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| arrhythmogenic right ventricular dysplasia 10 | Definitive | Autosomal dominant |
| familial isolated dilated cardiomyopathy | Supportive | Autosomal dominant |
| dilated cardiomyopathy 1BB | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (2)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| dilated cardiomyopathy 1BB | Limited | AD |
| arrhythmogenic right ventricular cardiomyopathy | Definitive | AD |
Mondo (22): cardiomyopathy (MONDO:0004994), arrhythmogenic right ventricular dysplasia 10 (MONDO:0012434), dilated cardiomyopathy 1BB (MONDO:0013030), arrhythmogenic right ventricular cardiomyopathy (MONDO:0016587), hypertrophic cardiomyopathy (MONDO:0005045), arrhythmogenic right ventricular dysplasia 9 (MONDO:0012180), long QT syndrome (MONDO:0002442), catecholaminergic polymorphic ventricular tachycardia 1 (MONDO:0011484), familial hypertrophic cardiomyopathy (MONDO:0024573), dilated cardiomyopathy (MONDO:0005021), cardiac arrest (MONDO:0000745), familial isolated arrhythmogenic right ventricular dysplasia (MONDO:0016342), amyloidosis, hereditary systemic 1 (MONDO:0971004), systolic heart failure (MONDO:0006993), restrictive cardiomyopathy (MONDO:0005201)
Orphanet (15): Familial isolated dilated cardiomyopathy (Orphanet:154), Rare cardiomyopathy (Orphanet:167848), Inherited arrhythmogenic cardiomyopathy (Orphanet:247), Rare hypertrophic cardiomyopathy (Orphanet:217569), Catecholaminergic polymorphic ventricular tachycardia (Orphanet:3286), Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Dilated cardiomyopathy (Orphanet:217604), Inherited isolated arrhythmogenic cardiomyopathy (Orphanet:217656), ATTRV30M amyloidosis (Orphanet:85447), ATTRV122I amyloidosis (Orphanet:85451), Restrictive cardiomyopathy (Orphanet:217632), Uhl anomaly (Orphanet:3403), Familial dilated cardiomyopathy (Orphanet:217607), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
37 total (30 of 37 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000969 | Edema |
| HP:0001635 | Congestive heart failure |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001645 | Sudden cardiac death |
| HP:0001727 | Thromboembolic stroke |
| HP:0001962 | Palpitations |
| HP:0002094 | Dyspnea |
| HP:0002224 | Woolly hair |
| HP:0002875 | Exertional dyspnea |
| HP:0003198 | Myopathy |
| HP:0003457 | EMG abnormality |
| HP:0003581 | Adult onset |
| HP:0003584 | Late onset |
| HP:0003596 | Middle age onset |
| HP:0003621 | Juvenile onset |
| HP:0004308 | Ventricular arrhythmia |
| HP:0004756 | Ventricular tachycardia |
| HP:0006682 | Premature ventricular contraction |
| HP:0011462 | Young adult onset |
| HP:0011663 | Right ventricular cardiomyopathy |
| HP:0011675 | Arrhythmia |
| HP:0011712 | Complete right bundle branch block |
| HP:0011713 | Left bundle branch block |
| HP:0012248 | Prolonged PR interval |
| HP:0012378 | Fatigue |
| HP:0012666 | Severely reduced left ventricular ejection fraction |
| HP:0012764 | Orthopnea |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006585_2587 | Blood protein levels | 1.000000e-08 |
MeSH disease descriptors (15)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D019571 | Arrhythmogenic Right Ventricular Dysplasia | C14.240.400.145; C14.280.238.028; C14.280.400.145; C16.131.240.400.145 |
| D009202 | Cardiomyopathies | C14.280.238 |
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
| D002312 | Cardiomyopathy, Hypertrophic | C14.280.238.100; C14.280.484.048.750.070.160 |
| D024741 | Cardiomyopathy, Hypertrophic, Familial | C14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160 |
| D002313 | Cardiomyopathy, Restrictive | C14.280.238.160 |
| D006323 | Heart Arrest | C14.280.383 |
| D054143 | Heart Failure, Systolic | C14.280.434.676 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D008133 | Long QT Syndrome | C14.280.067.565; C14.280.123.625; C16.131.240.400.715; C23.550.073.547 |
| C565707 | Arrhythmogenic Right Ventricular Dysplasia, Familial, 10 (supp.) | |
| C563409 | Arrhythmogenic Right Ventricular Dysplasia, Familial, 2 (supp.) | |
| C563808 | Arrhythmogenic Right Ventricular Dysplasia, Familial, 9 (supp.) | |
| C567877 | Cardiomyopathy, Dilated, 1BB (supp.) | |
| C536231 | familial dilated cardiomyopathy (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
58 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Tobacco Smoke Pollution | decreases expression, increases expression, affects expression | 4 |
| bisphenol A | decreases expression, increases expression, affects cotreatment | 3 |
| Benzo(a)pyrene | affects methylation, decreases expression, increases expression | 3 |
| Valproic Acid | affects expression, increases expression | 3 |
| methylmercuric chloride | decreases expression | 2 |
| trichostatin A | increases expression | 2 |
| nickel sulfate | increases expression | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | increases expression, affects cotreatment, decreases expression | 2 |
| Aflatoxin B1 | increases expression | 2 |
| FR900359 | decreases phosphorylation | 1 |
| perfluorodecanesulfonic acid | increases expression | 1 |
| pyrogallol 1,3-dimethyl ether | increases expression, affects cotreatment, affects localization, decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| sodium arsenite | affects binding, increases reaction, increases activity | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| 2-bromopalmitate | increases abundance, increases palmitoylation, decreases reaction | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| dibenzo(a,l)pyrene | decreases expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | increases expression | 1 |
| 2,2’,4,4’,5-brominated diphenyl ether | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | increases expression | 1 |
| trans-3,4’-dimethyl-3-hydroxyflavanone | increases expression | 1 |
| incobotulinumtoxinA | decreases expression | 1 |
| LDN 193189 | affects cotreatment, decreases expression | 1 |
| picoxystrobin | increases expression | 1 |
| Temozolomide | decreases expression | 1 |
| Sunitinib | increases expression | 1 |
Cellosaurus cell lines
10 cell lines: 5 induced pluripotent stem cell, 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A4JR | UMGi121-A.2 | Induced pluripotent stem cell | Male |
| CVCL_A4JS | UMGi121-A.3 | Induced pluripotent stem cell | Male |
| CVCL_A4JT | UMGi121-A.4 | Induced pluripotent stem cell | Male |
| CVCL_A5CD | UNIPDi006-A | Induced pluripotent stem cell | Male |
| CVCL_A5QI | JMUi001-A-3 | Induced pluripotent stem cell | Male |
| CVCL_B1F4 | Abcam A-549 DSG2 KO 2 | Cancer cell line | Male |
| CVCL_B1QE | Abcam HeLa DSG2 KO | Cancer cell line | Female |
| CVCL_B2MM | Abcam A-549 DSG2 KO 1 | Cancer cell line | Male |
| CVCL_SL18 | HAP1 DSG2 (-) 1 | Cancer cell line | Male |
| CVCL_XN31 | HAP1 DSG2 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00348530 | PHASE4 | UNKNOWN | Carvedilol Versus Verapamil in Chronic Heart Failure Secondary to Non-Ischemic Cardiomyopathy |
| NCT00371891 | PHASE4 | COMPLETED | Ontario Multidetector Computed Tomographic (MDCT) Coronary Angiography Study (OMCAS) |
| NCT00401856 | PHASE4 | COMPLETED | CMR to Assess Fibrosis in Cardiomyopathy Using Eplerenone |
| NCT00559338 | PHASE4 | COMPLETED | Impact of Nesiritide Infusion for Decompensated Heart Failure in the Emergency Department |
| NCT00606775 | PHASE4 | UNKNOWN | The Preventive Efficacy of Carvedilol on Cardiac Dysfunction in Duchenne Muscular Dystrophy |
| NCT00658203 | PHASE4 | COMPLETED | Clinical Evaluation on Advanced Resynchronization |
| NCT00701220 | PHASE4 | COMPLETED | Statin Therapy for Ischemic and Nonischemic Cardiomyopathy |
| NCT00800761 | PHASE4 | COMPLETED | Intensive Combined Chelation Therapy for Iron-Induced Cardiac Disease in Patients With Thalassemia Major |
| NCT00806390 | PHASE4 | TERMINATED | Prevention of Anthracycline or Trastuzumab Induced Cardiomyopathy by Metoprolol |
| NCT01006473 | PHASE4 | COMPLETED | Exercise Training in Chagas Cardiomyopathy |
| NCT01261065 | PHASE4 | COMPLETED | Mechanisms of Improvement With Beta-Blocker Treatment in Heart Failure |
| NCT01345188 | PHASE4 | COMPLETED | Ranolazine in Ischemic Cardiomyopathy |
| NCT01868841 | PHASE4 | COMPLETED | 123-I mIBG (AdreView) Heart-to-Mediastinal (H/M) Ratio and SPECT Imaging on a Small Field of View-High Efficiency Cardiac SPECT System |
| NCT02640846 | PHASE4 | UNKNOWN | Effects of Levosimendan, Milrinone and Norepinephrine on Left and Right Ventricular Function in Septic Shock |
| NCT03228823 | PHASE4 | UNKNOWN | Prospective Assessment of Premature Ventricular Contractions Suppression in Cardiomyopathy(PAPS) |
| NCT04323852 | PHASE4 | COMPLETED | Can Vitamin D Reduce Heart Muscle Damage After Bypass Surgery? |
| NCT05034432 | PHASE4 | RECRUITING | The PIVATAL Study -Study of Ventricular Arrhythmia (VTA) Ablation in Left Ventricular Assist Device (LVAD) Patients |
| NCT05718128 | PHASE4 | RECRUITING | Clinical Study of Endocardial Myocardial Biopsy |
| NCT06964464 | PHASE4 | RECRUITING | Comparative Effectiveness of Carvedilol Versus Metoprolol Succinate in Heart Failure Patients With an Implantable Cardioverter Defibrillator |
| NCT00170183 | PHASE3 | COMPLETED | Brain Natriuretic Peptide (BNP) to Preserve Renal Function in Hospitalized Patients With Heart Failure |
| NCT00270387 | PHASE3 | COMPLETED | A Study of Short-Term Outcomes and Economic Impact For Patients With Worsening Congestive Heart Failure When Natrecor (Nesiritide) is Added to Standard-Care Therapy, Compared to Administration of Placebo With Standard-Care Therapy |
| NCT00321295 | PHASE3 | COMPLETED | Biventricular Pacing In Patients With Left Ventricular Dysfunction After Cardiovascular Surgery |
| NCT00483197 | PHASE3 | UNKNOWN | VentrAssistTM LVAD as a Bridge to Cardiac Transplantation - Pivotal Trial |
| NCT00490321 | PHASE3 | UNKNOWN | VentrAssistTM LVAD for the Treatment of Advanced Heart Failure - Destination Therapy |
| NCT00626028 | PHASE3 | COMPLETED | Comparison of Inhaled Nitric Oxide and Oxygen in Participants Reactivity During Acute Pulmonary Vasodilator Testing |
| NCT01013714 | PHASE3 | UNKNOWN | Cardiac Sympathetic Denervation for Prevention of Ventricular Tachyarrhythmias |
| NCT01217827 | PHASE3 | COMPLETED | Implantable Cardioverter-Defibrillator Use in the VA System |
| NCT01648634 | PHASE3 | COMPLETED | Nebivolol for the Prevention of Left Ventricular Systolic Dysfunction in Patients With Duchenne Muscular Dystrophy |
| NCT02924285 | PHASE3 | COMPLETED | Catheter Ablation Versus Amiodarone for Therapy of Premature Ventricular Contractions in Patients With Structural Heart Disease |
| NCT03860935 | PHASE3 | COMPLETED | Efficacy and Safety of AG10 in Subjects With Transthyretin Amyloid Cardiomyopathy |
| NCT04166331 | PHASE3 | COMPLETED | Adjunctive DobutAmine in sePtic Cardiomyopathy With Tissue Hypoperfusion |
| NCT05175066 | PHASE3 | COMPLETED | Bisoprolol Administration to Prevent Anthracycline-induced Cardiotoxicity |
| NCT05237323 | PHASE3 | COMPLETED | Micophenolate Mofetil Versus Azathioprine in Myocarditis |
| NCT06158698 | PHASE3 | RECRUITING | CMP-MYTHiC Trial and Registry - CardioMyoPathy With MYocarditis THerapy With Colchicine |
| NCT06563895 | PHASE3 | RECRUITING | Acoramidis Transthyretin Amyloidosis Prevention Trial in the Young (ACT-EARLY) Study in Asymptomatic Carriers of a Pathogenic TTR Variant |
| NCT06846086 | PHASE3 | RECRUITING | Cardioprotective Effects of Melatonin in Patients With Cardiomyopathy |
| NCT07116473 | PHASE3 | NOT_YET_RECRUITING | To Evaluate the Long-term Safety and Tolerability of Acoramidis in Participants With Newly Diagnosed ATTR-CM (ACT-EARLY OLE) |
| NCT00185250 | PHASE2 | COMPLETED | Betaferon/ Betaseron (Interferon Beta-1b) in Patients With Chronic Viral Cardiomyopathy |
| NCT00490347 | PHASE2 | COMPLETED | VentrAssistTM LVAD as a Bridge to Cardiac Transplantation - Feasibility Trial |
| NCT00694161 | PHASE2 | COMPLETED | The Effects Of Fx-1006A On Transthyretin Stabilization And Clinical Outcome Measures In Patients With V122I Or Wild-Type TTR Amyloid Cardiomyopathy |
Related Atlas pages
- Associated diseases: arrhythmogenic right ventricular dysplasia 10, dilated cardiomyopathy 1BB, familial isolated dilated cardiomyopathy, arrhythmogenic right ventricular cardiomyopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): amyloidosis, hereditary systemic 1, arrhythmogenic right ventricular cardiomyopathy, arrhythmogenic right ventricular dysplasia 1, arrhythmogenic right ventricular dysplasia 10, arrhythmogenic right ventricular dysplasia 9, cardiac arrest, cardiac rhythm disease, catecholaminergic polymorphic ventricular tachycardia 1, ciliary dyskinesia, primary, 40, dilated cardiomyopathy 1BB, familial dilated cardiomyopathy, familial hypertrophic cardiomyopathy, familial isolated arrhythmogenic right ventricular dysplasia, familial isolated dilated cardiomyopathy, restrictive cardiomyopathy, systolic heart failure