EBF3-AS1

Summary

EBF3-AS1 (EBF3 antisense RNA 1, HGNC:56218) is a long non-coding RNA gene on chromosome 10q26.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56218
Approved symbol	EBF3-AS1
Name	EBF3 antisense RNA 1
Location	10q26.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000287997
Ensembl biotype	lncRNA
Entrez	105378558
RNAcentral	URS0000EECC53 — lncRNA, 1053 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000653993

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000653993 — 5 exons

Exon	Start	End
ENSE00003851255	129858250	129858426
ENSE00003852396	129863212	129863323
ENSE00003874302	129860146	129860283
ENSE00003882963	129866883	129867384
ENSE00003886158	129857638	129857761

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 71.19.

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	71.19	gold quality
colonic epithelium	UBERON:0000397	70.54	silver quality
calcaneal tendon	UBERON:0003701	63.67	gold quality
bone marrow cell	CL:0002092	62.01	silver quality
skeletal muscle tissue	UBERON:0001134	60.29	silver quality
subcutaneous adipose tissue	UBERON:0002190	56.55	gold quality
adipose tissue	UBERON:0001013	53.67	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.77	silver quality
prefrontal cortex	UBERON:0000451	51.31	gold quality
liver	UBERON:0002107	51.25	silver quality
mucosa of stomach	UBERON:0001199	51.19	gold quality
muscle of leg	UBERON:0001383	51.10	gold quality
primary visual cortex	UBERON:0002436	50.85	gold quality
superior frontal gyrus	UBERON:0002661	50.74	gold quality
right lobe of liver	UBERON:0001114	50.67	gold quality
tibial nerve	UBERON:0001323	50.21	gold quality
gastrocnemius	UBERON:0001388	49.88	gold quality
omental fat pad	UBERON:0010414	49.83	gold quality
blood	UBERON:0000178	49.71	silver quality
putamen	UBERON:0001874	49.31	gold quality
gall bladder	UBERON:0002110	49.20	gold quality
nucleus accumbens	UBERON:0001882	49.11	gold quality
thoracic mammary gland	UBERON:0005200	48.85	gold quality
right coronary artery	UBERON:0001625	48.70	gold quality
apex of heart	UBERON:0002098	48.65	gold quality
lymph node	UBERON:0000029	48.61	silver quality
frontal cortex	UBERON:0001870	48.60	gold quality
smooth muscle tissue	UBERON:0001135	48.36	gold quality
right atrium auricular region	UBERON:0006631	48.35	gold quality
caudate nucleus	UBERON:0001873	48.34	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.