ECI2-DT

Summary

ECI2-DT (ECI2 divergent transcript, HGNC:54425) is a long non-coding RNA gene on chromosome 6p25.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54425
Approved symbol	ECI2-DT
Name	ECI2 divergent transcript
Location	6p25.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234817
Ensembl biotype	lncRNA
Entrez	100507506
RNAcentral	URS000000FF0C — lncRNA, 2277 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000427049, ENST00000527831, ENST00000716024, ENST00000716042, ENST00000795390, ENST00000795391, ENST00000795392, ENST00000795393, ENST00000795394, ENST00000795395, ENST00000808374, ENST00000808375, ENST00000808376

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000427049 — 4 exons

Exon	Start	End
ENSE00001707560	4155481	4157385
ENSE00001730726	4154841	4154993
ENSE00002144441	4136072	4136248
ENSE00002165859	4137361	4137402

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 85.95.

Top tissues by expression

222 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.95	gold quality
buccal mucosa cell	CL:0002336	63.00	gold quality
secondary oocyte	CL:0000655	60.03	gold quality
myocardium	UBERON:0002349	59.05	gold quality
ventricular zone	UBERON:0003053	58.66	silver quality
ganglionic eminence	UBERON:0004023	57.49	silver quality
medial globus pallidus	UBERON:0002477	55.87	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	54.84	gold quality
apex of heart	UBERON:0002098	54.65	gold quality
tendon of biceps brachii	UBERON:0008188	54.60	gold quality
tendon	UBERON:0000043	54.30	silver quality
cerebellar vermis	UBERON:0004720	53.70	gold quality
globus pallidus	UBERON:0001875	53.43	silver quality
left adrenal gland	UBERON:0001234	53.09	gold quality
leukocyte	CL:0000738	53.03	silver quality
calcaneal tendon	UBERON:0003701	52.79	silver quality
adrenal gland	UBERON:0002369	52.61	gold quality
monocyte	CL:0000576	52.54	silver quality
hindlimb stylopod muscle	UBERON:0004252	52.11	silver quality
upper leg skin	UBERON:0004262	52.05	silver quality
adrenal tissue	UBERON:0018303	51.76	gold quality
right adrenal gland	UBERON:0001233	51.75	gold quality
right adrenal gland cortex	UBERON:0035827	51.74	gold quality
spleen	UBERON:0002106	51.59	gold quality
left adrenal gland cortex	UBERON:0035825	51.39	gold quality
transverse colon	UBERON:0001157	51.21	gold quality
islet of Langerhans	UBERON:0000006	50.99	gold quality
mucosa of transverse colon	UBERON:0004991	50.85	gold quality
gall bladder	UBERON:0002110	50.80	gold quality
heart left ventricle	UBERON:0002084	50.75	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.