EDIL3-DT

Summary

EDIL3-DT (EDIL3 divergent transcript, HGNC:40204) is a long non-coding RNA gene on chromosome 5q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40204
Approved symbol	EDIL3-DT
Name	EDIL3 divergent transcript
Location	5q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250320
Ensembl biotype	lncRNA
Entrez	105379057
RNAcentral	URS00026A2233 — lncRNA, 680 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000502253, ENST00000507060, ENST00000509406, ENST00000514696, ENST00000515688, ENST00000653332, ENST00000654215, ENST00000661098, ENST00000661965, ENST00000666514, ENST00000670929, ENST00000693101, ENST00000846037, ENST00000846038, ENST00000846039, ENST00000846040, ENST00000846041, ENST00000846042, ENST00000846043, ENST00000846044

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502253 — 5 exons

Exon	Start	End
ENSE00002026181	84387822	84387936
ENSE00002042990	84385888	84386055
ENSE00002068793	84400658	84403145
ENSE00002075696	84385479	84385794
ENSE00002082984	84399585	84399652

Expression profiles

Bgee: expression breadth ubiquitous, 157 present calls, max score 83.73.

FANTOM5 (CAGE): breadth broad, TPM avg 1.2780 / max 36.1344, expressed in 640 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
57431	0.5661	336
57432	0.4551	199
57430	0.2569	123

Top tissues by expression

253 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	83.73	gold quality
buccal mucosa cell	CL:0002336	83.57	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.44	gold quality
right coronary artery	UBERON:0001625	80.25	gold quality
popliteal artery	UBERON:0002250	79.97	gold quality
tibial artery	UBERON:0007610	79.96	gold quality
aorta	UBERON:0000947	78.95	gold quality
left coronary artery	UBERON:0001626	78.79	gold quality
tendon of biceps brachii	UBERON:0008188	78.77	silver quality
ascending aorta	UBERON:0001496	78.27	gold quality
thoracic aorta	UBERON:0001515	78.13	gold quality
coronary artery	UBERON:0001621	76.82	gold quality
descending thoracic aorta	UBERON:0002345	76.58	gold quality
stromal cell of endometrium	CL:0002255	74.50	gold quality
calcaneal tendon	UBERON:0003701	74.48	gold quality
tendon	UBERON:0000043	74.15	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.66	gold quality
mucosa of transverse colon	UBERON:0004991	71.61	gold quality
bone marrow cell	CL:0002092	71.31	silver quality
islet of Langerhans	UBERON:0000006	70.97	gold quality
rectum	UBERON:0001052	70.44	gold quality
medial globus pallidus	UBERON:0002477	70.26	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	70.04	gold quality
sural nerve	UBERON:0015488	69.60	gold quality
skin of abdomen	UBERON:0001416	68.35	gold quality
prefrontal cortex	UBERON:0000451	68.14	gold quality
skin of leg	UBERON:0001511	67.36	gold quality
spinal cord	UBERON:0002240	67.35	gold quality
transverse colon	UBERON:0001157	67.25	gold quality
gall bladder	UBERON:0002110	67.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.69

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.