EDNRB
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Also known as ETB
Summary
EDNRB (endothelin receptor type B, HGNC:3180) is a protein-coding gene on chromosome 13q22.3, encoding Endothelin receptor type B (P24530). Non-specific receptor for endothelin 1, 2, and 3.
The protein encoded by this gene is a G protein-coupled receptor which activates a phosphatidylinositol-calcium second messenger system. Its ligand, endothelin, consists of a family of three potent vasoactive peptides: ET1, ET2, and ET3. Studies suggest that the multigenic disorder, Hirschsprung disease type 2, is due to mutations in the endothelin receptor type B gene. Alternative splicing and the use of alternative promoters results in multiple transcript variants.
Source: NCBI Gene 1910 — RefSeq curated summary.
At a glance
- Gene–disease (curated): Waardenburg syndrome type 4A (Definitive, GenCC) — +3 more curated relationships
- GWAS associations: 5
- Clinical variants (ClinVar): 364 total — 16 pathogenic, 17 likely-pathogenic
- Phenotypes (HPO): 62
- Druggable target: yes — 16 molecules with ChEMBL bioactivity
- Dosage sensitivity (ClinGen): haploinsufficiency little evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_001122659
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3180 |
| Approved symbol | EDNRB |
| Name | endothelin receptor type B |
| Location | 13q22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ETB |
| Ensembl gene | ENSG00000136160 |
| Ensembl biotype | protein_coding |
| OMIM | 131244 |
| Entrez | 1910 |
Gene structure
Transcript identifiers
Ensembl transcripts: 9 — 9 protein_coding
ENST00000377211, ENST00000475537, ENST00000626030, ENST00000643890, ENST00000645696, ENST00000646605, ENST00000646607, ENST00000646948, ENST00000965351
RefSeq mRNA: 4 — MANE Select: NM_001122659
NM_000115, NM_001122659, NM_001201397, NM_003991
CCDS: CCDS45059, CCDS55902, CCDS9461
Canonical transcript exons
ENST00000646607 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000923783 | 77899859 | 77899967 |
| ENSE00000923784 | 77900521 | 77900654 |
| ENSE00000923785 | 77901058 | 77901207 |
| ENSE00000923786 | 77903156 | 77903360 |
| ENSE00000923787 | 77903495 | 77903607 |
| ENSE00003817451 | 77895487 | 77898334 |
| ENSE00003817536 | 77918091 | 77918831 |
Expression profiles
Bgee: expression breadth ubiquitous, 274 present calls, max score 97.59.
FANTOM5 (CAGE): breadth broad, TPM avg 9.4278 / max 307.2296, expressed in 750 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 137698 | 3.0723 | 530 |
| 137697 | 2.8606 | 522 |
| 137699 | 1.1019 | 440 |
| 137703 | 1.0165 | 254 |
| 137700 | 0.9119 | 390 |
| 137706 | 0.1361 | 38 |
| 137702 | 0.1313 | 79 |
| 137701 | 0.1109 | 66 |
| 207067 | 0.0640 | 26 |
| 137705 | 0.0223 | 10 |
Top tissues by expression
290 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| parotid gland | UBERON:0001831 | 97.59 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 96.91 | gold quality |
| lower lobe of lung | UBERON:0008949 | 96.86 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 96.46 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 96.37 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 96.02 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 95.76 | gold quality |
| medial globus pallidus | UBERON:0002477 | 95.66 | gold quality |
| globus pallidus | UBERON:0001875 | 95.65 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 95.48 | gold quality |
| medulla oblongata | UBERON:0001896 | 95.42 | gold quality |
| right lung | UBERON:0002167 | 94.98 | gold quality |
| placenta | UBERON:0001987 | 94.84 | gold quality |
| pericardium | UBERON:0002407 | 94.84 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 94.77 | gold quality |
| ventral tegmental area | UBERON:0002691 | 94.57 | gold quality |
| omental fat pad | UBERON:0010414 | 94.57 | gold quality |
| peritoneum | UBERON:0002358 | 94.51 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 94.45 | gold quality |
| upper lobe of lung | UBERON:0008948 | 94.32 | gold quality |
| decidua | UBERON:0002450 | 94.27 | gold quality |
| caudate nucleus | UBERON:0001873 | 94.24 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 94.11 | gold quality |
| putamen | UBERON:0001874 | 94.09 | gold quality |
| lung | UBERON:0002048 | 93.92 | gold quality |
| nucleus accumbens | UBERON:0001882 | 93.71 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 93.67 | gold quality |
| metanephros cortex | UBERON:0010533 | 93.67 | gold quality |
| adipose tissue | UBERON:0001013 | 93.60 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 92.91 | gold quality |
Single-cell (SCXA)
Detected in 12 experiment(s), a significant marker in 10.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6308 | yes | 1685.87 |
| E-GEOD-135922 | yes | 1511.29 |
| E-HCAD-56 | yes | 584.36 |
| E-MTAB-8142 | yes | 45.02 |
| E-GEOD-93593 | yes | 14.45 |
| E-CURD-46 | yes | 12.62 |
| E-MTAB-9388 | yes | 11.67 |
| E-GEOD-81547 | yes | 11.43 |
| E-HCAD-1 | yes | 10.07 |
| E-ENAD-20 | no | 1426.19 |
| E-MTAB-10137 | no | 4.87 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CEBPA, CEBPB, GATA2, HIF1A, MITF, MTF1, SOX10, SP1
miRNA regulators (miRDB)
163 targeting EDNRB, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-33A-5P | 99.99 | 68.62 | 1055 |
| HSA-MIR-33B-5P | 99.99 | 68.58 | 1062 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-9-3P | 99.96 | 70.88 | 2068 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
Functional genomics
ClinGen dosage: haploinsufficiency 1 (little evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- novel mutation in a patient with Shah-Waardenburg syndrome and Down syndrome (PMID:11565556)
- The endothelin system plays a role in the complex pathophysiology of idiopathic dilated cardiomyopathy. (PMID:11601839)
- determination of the molecular basis of embryonic arrest from defects associated with mesoderm development (PMID:11829485)
- signal peptide is necessary for translocation of the N-terminal tail across the endoplasmic reticulum membrane. (PMID:11854280)
- A homozygous nonsense mutation in exon 3 (R201X) of the EDNRB gene, a gene known to be involved in Shah-Waardenburg syndrome, was found in ABCD syndrome. (PMID:11891690)
- Repression of endothelin receptor plays a role in the development of nasopharyngeal carcinoma (PMID:11920632)
- The vasoconstrictor effect of endothelin-1 in small resistance arteries of normotensive subjects and, in part, also in hypertensive patients is mediated by ET(A) receptors, while ET(B) receptors play a minor role, if any (PMID:11930911)
- Augmented synthesis and altered expression of ET(B) receptors in the peripheral vasculature contribute to the increased incidence of hypertension and related complications in African American patient populations. (PMID:12117726)
- N-terminal proteolysis has a role in the regulation of cell surface expression of the ET(B) receptor (PMID:12226103)
- genetic interaction between mutations in RET and EDNRB is an underlying mechanism for Hirschsprung disease (PMID:12355085)
- Down-regulation of endothelin receptor B correlated with death from metastatic disease in uveal melanoma (PMID:12439722)
- Detection of endothelin-B receptor gene polymorphisms in patients that have both Hirschsprung’s disease and Down’s syndrome. (PMID:12628594)
- autosomal-dominant polycystic kidney (PMID:12629276)
- a study of interactions with caveolin-1 in caveolae (PMID:12694195)
- Data show that in a human Kaposi sarcoma cell line, blockade of endothelin receptors A and B blocked the endothelin-1-induced increase in secretion and activation of matrix-metalloproteinases. (PMID:12875994)
- The ETB receptor shows remarkable stability in lysosomes, held together by disulfide bonds, and maintaining ligand binding for long periods of time (PMID:12972292)
- ET(B)R is more common in breast carcinomas of patients with lower disease-free survival time and overall survival. (PMID:14519635)
- It is clear from the present data for lung fibroblasts that for both stimulated and unstimulated states of ETB receptors, there exist multiple covalent forms differing in the number and location of sites of posttranslational modifications. (PMID:14636059)
- Mutations are found in Hirschsprung’s disease in a Chinese population. (PMID:14669347)
- Endothelin ETB receptor mRNA levels are significantly higher in arteries from patients with ischemic heart disease as compared to congestive heart failure and controls. (PMID:14729387)
- increased ET-1, ET(A)R, and ET(B)R expression are associated with increased VEGF expression and higher vascularity of breast carcinomas and could be involved in the regulation of angiogenesis in breast cancer (PMID:15073116)
- ET-1/ETA/ETB autocrine/paracrine loops on DCs appear to be essential for the normal maturation and function of human dendritic cells (PMID:15213100)
- Combined cleavage data strongly suggest that the binding domain of ETB receptor includes a portion of the fifth transmembrane domain, between residues Trp275 and Met296. (PMID:15350137)
- Within the second intracellular loop of ETB, a consensus sequence was identified, KXXXVPKXXXV, that is required for ET-1 stimulation of NHE3 activity. (PMID:15598844)
- Endothelin-B receptor blockade inhibits molecular effectors of melanoma cell progression. (PMID:15838263)
- Compared kidney endothelin-A and endothelin-B receptor distribution visualized by radioligand binding versus immunocytochemical localization using subtype selective antisera. (PMID:15838285)
- These data point to ET-1 as a possible survival factor for oligodendrogliomas via ET(B)-R activation and suggest that ET(B)-R-specific antagonists might constitute a potential therapeutic alternative for oligodendrogliomas. (PMID:15950764)
- Polymorphisms in the ET-1 gene (K198N), the ET receptor type A (ETA), (-231G>A and +1222C>T), and the ET type B (ETB) receptor (G57S and L277L) do not play a role in cerebral small-vessel disease (PMID:16002759)
- Inactivation of the EDNRB gene through its promoter methylation is highly prevalent in lung cancer in Taiwan. (PMID:16328051)
- Observations strongly suggest that the expression of ETB receptor is enhanced in neointimal smooth muscle cells at early stages after percutaneous coronary intervention injury in human coronary arteries. (PMID:16531800)
- Reverse transcriptase-polymerase chain reaction analysis revealed mRNA the ETB receptor subtype in the human trigeminal ganglion. Immunocytochemistry revealed numerous cell bodies containing ETB proteins. (PMID:16816835)
- Data show that mutation of EDNRB gene can be detected in Chinese patients with sporadic Hirschsprung’s disease and EDNRB gene might play an important role in the pathogenesis of Hirschsprung’s disease . (PMID:16944573)
- Associations between endothelin receptors A and B in aystemic ssclerosis subsets supports the role of endothelin and its receptors in the pathogenesis of this disease. (PMID:16947775)
- ET receptors in pigment cells of vertebrate species were identified by RT-PCR assays, and the differential expression of the various subtypes in each species was compared by quantitative PCR. (PMID:16962346)
- This study identified additional sequence variants of the EDNRB gene, but the estimated EDNRB haplotypes did not show any disease risk. (PMID:17011274)
- Transfected into mice, implicating endothelin as a major modifying factor for cystic disease progression in human autosomal dominant polycystic kidney disease. (PMID:17202412)
- analysis of Endothelin-1, ETAR and ETBR expression in different histologic subtypes of renal cell carcinoma (PMID:17203161)
- Endogenous endothelin, predominantly via ET(A) receptor stimulation, contributes to basal constrictor tone and endothelial dysfunction, whereas ET(B) activation mediates vasodilation in human coronaries. (PMID:17353514)
- The EDNRB-30G>A polymorphism could be a determinant of airway obstruction in humans with predisposing factors such as tobacco smoke exposure or asthma. (PMID:17470272)
- EDNRB-rs5351 was the most susceptible SNP associated with atherosclerosis in male hypertensives, and the genetic background may be involved in the progression of atherosclerosis in EHT patients. (PMID:17525706)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ednrbb | ENSDARG00000053498 |
| danio_rerio | ednrba | ENSDARG00000089334 |
| mus_musculus | Ednrb | ENSMUSG00000022122 |
| rattus_norvegicus | Ednrb | ENSRNOG00000010997 |
Paralogs (15): NTSR1 (ENSG00000101188), BRS3 (ENSG00000102239), MLNR (ENSG00000102539), GHSR (ENSG00000121853), GRPR (ENSG00000126010), NMUR2 (ENSG00000132911), NMBR (ENSG00000135577), EDNRA (ENSG00000151617), NTSR2 (ENSG00000169006), GPR37L1 (ENSG00000170075), GPR37 (ENSG00000170775), NMUR1 (ENSG00000171596), GPR148 (ENSG00000173302), TRHR (ENSG00000174417), GPR39 (ENSG00000183840)
Protein
Protein identifiers
Endothelin receptor type B — P24530 (reviewed: P24530)
Alternative names: Endothelin receptor non-selective type
All UniProt accessions (3): A0A2R8Y748, A0A2R8YGF7, P24530
UniProt curated annotations — full annotation on UniProt →
Function. Non-specific receptor for endothelin 1, 2, and 3. Mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.
Subcellular location. Cell membrane.
Tissue specificity. Expressed in placental stem villi vessels, but not in cultured placental villi smooth muscle cells.
Post-translational modifications. Palmitoylation of Cys-402 was confirmed by the palmitoylation of Cys-402 in a deletion mutant lacking both Cys-403 and Cys-405.
Disease relevance. Waardenburg syndrome 4A (WS4A) [MIM:277580] A disorder characterized by the association of Waardenburg features (depigmentation and deafness) with the absence of enteric ganglia in the distal part of the intestine (Hirschsprung disease). The disease is caused by variants affecting the gene represented in this entry. Hirschsprung disease 2 (HSCR2) [MIM:600155] A disorder of neural crest development characterized by absence of enteric ganglia along a variable length of the intestine. It is the most common cause of congenital intestinal obstruction. Early symptoms range from complete acute neonatal obstruction, characterized by vomiting, abdominal distention and failure to pass stool, to chronic constipation in the older child. The disease is caused by variants affecting the gene represented in this entry. ABCD syndrome (ABCDS) [MIM:600501] An autosomal recessive syndrome characterized by albinism, black lock at temporal occipital region, bilateral deafness, aganglionosis of the large intestine and total absence of neurocytes and nerve fibers in the small intestine. The disease is caused by variants affecting the gene represented in this entry. Heterozygous mutations in EDNRB may be responsible for Waardenburg syndrome 2, an autosomal dominant disorder characterized by sensorineural deafness and pigmentary disturbances.
Similarity. Belongs to the G-protein coupled receptor 1 family. Endothelin receptor subfamily. EDNRB sub-subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P24530-1 | A | yes |
| P24530-2 | B | |
| P24530-3 | C, Delta-3 |
RefSeq proteins (4): NP_000106, NP_001116131, NP_001188326, NP_003982 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR000499 | Endthln_rcpt | Family |
| IPR001112 | ETB_rcpt | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
| IPR051193 | GPCR_endothelin_rcpt | Family |
Pfam: PF00001
UniProt features (78 total): sequence variant 18, helix 11, sequence conflict 9, topological domain 8, transmembrane region 7, modified residue 6, strand 5, lipid moiety-binding region 3, mutagenesis site 3, splice variant 2, signal peptide 1, chain 1, region of interest 1, glycosylation site 1, disulfide bond 1, turn 1
Structure
Experimental structures (PDB)
18 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6IGK | X-RAY DIFFRACTION | 2 |
| 5X93 | X-RAY DIFFRACTION | 2.2 |
| 5GLI | X-RAY DIFFRACTION | 2.5 |
| 6IGL | X-RAY DIFFRACTION | 2.7 |
| 6K1Q | X-RAY DIFFRACTION | 2.7 |
| 5GLH | X-RAY DIFFRACTION | 2.8 |
| 8IY5 | ELECTRON MICROSCOPY | 2.8 |
| 8HBD | ELECTRON MICROSCOPY | 2.99 |
| 6LRY | X-RAY DIFFRACTION | 3 |
| 8XVE | ELECTRON MICROSCOPY | 3 |
| 8IY6 | ELECTRON MICROSCOPY | 3.13 |
| 8XGR | ELECTRON MICROSCOPY | 3.2 |
| 8XWP | ELECTRON MICROSCOPY | 3.21 |
| 8XVH | ELECTRON MICROSCOPY | 3.26 |
| 8HCX | ELECTRON MICROSCOPY | 3.5 |
| 5XPR | X-RAY DIFFRACTION | 3.6 |
| 8ZRT | ELECTRON MICROSCOPY | 3.62 |
| 8XWQ | ELECTRON MICROSCOPY | 4.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P24530-F1 | 75.37 | 0.45 |
Antibody-complex structures (SAbDab): 8 — 8HBD, 8HCX, 8IY5, 8XGR, 8XVE, 8XVH, 8XWP, 8XWQ
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (9): 305, 419, 439, 440, 441, 442, 402, 403, 405
Disulfide bonds (1): 174–255
Glycosylation sites (1): 59
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 402 | abolishes palmitoylation; when associated with s-403 and s-405. |
| 403 | abolishes palmitoylation; when associated with s-402 and s-405. |
| 405 | abolishes palmitoylation; when associated with s-402 and s-403. |
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-375276 | Peptide ligand-binding receptors |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-9856649 | Transcriptional and post-translational regulation of MITF-M expression and activity |
MSigDB gene sets: 537 (showing top):
GSE45365_HEALTHY_VS_MCMV_INFECTION_CD8_TCELL_IFNAR_KO_UP, GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_UP, GSE18804_SPLEEN_MACROPHAGE_VS_TUMORAL_MACROPHAGE_UP, GOBP_ENDOTHELIAL_CELL_DEVELOPMENT, LI_CISPLATIN_RESISTANCE_DN, GOBP_EXCRETION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_POSITIVE_REGULATION_OF_REPRODUCTIVE_PROCESS, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_REGULATION_OF_CELL_MATURATION, GOBP_NEGATIVE_REGULATION_OF_CELL_DEVELOPMENT, GOBP_REGULATION_OF_SYSTEMIC_ARTERIAL_BLOOD_PRESSURE_BY_CIRCULATORY_RENIN_ANGIOTENSIN, GOBP_BEHAVIOR, GOBP_REGULATION_OF_BLOOD_PRESSURE, GOBP_MYELOID_LEUKOCYTE_MIGRATION
GO Biological Process (59): negative regulation of transcription by RNA polymerase II (GO:0000122), neural crest cell migration (GO:0001755), renin secretion into blood stream (GO:0002001), regulation of heart rate (GO:0002027), regulation of pH (GO:0006885), cell surface receptor signaling pathway (GO:0007166), negative regulation of adenylate cyclase activity (GO:0007194), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), positive regulation of cytosolic calcium ion concentration (GO:0007204), nervous system development (GO:0007399), peripheral nervous system development (GO:0007422), posterior midgut development (GO:0007497), positive regulation of cell population proliferation (GO:0008284), gene expression (GO:0010467), negative regulation of neuron maturation (GO:0014043), vein smooth muscle contraction (GO:0014826), calcium-mediated signaling (GO:0019722), obsolete cGMP-mediated signaling (GO:0019934), heparin proteoglycan metabolic process (GO:0030202), melanocyte differentiation (GO:0030318), regulation of fever generation (GO:0031620), aldosterone metabolic process (GO:0032341), enteric smooth muscle cell differentiation (GO:0035645), positive regulation of urine volume (GO:0035810), renal sodium excretion (GO:0035812), epithelial fluid transport (GO:0042045), vasoconstriction (GO:0042310), vasodilation (GO:0042311), negative regulation of apoptotic process (GO:0043066), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), developmental pigmentation (GO:0048066), macrophage chemotaxis (GO:0048246), response to pain (GO:0048265), enteric nervous system development (GO:0048484), regulation of epithelial cell proliferation (GO:0050678), negative regulation of protein metabolic process (GO:0051248), canonical Wnt signaling pathway (GO:0060070), positive regulation of penile erection (GO:0060406), establishment of endothelial barrier (GO:0061028), renal sodium ion absorption (GO:0070294)
GO Molecular Function (5): endothelin receptor activity (GO:0004962), peptide hormone binding (GO:0017046), type 1 angiotensin receptor binding (GO:0031702), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515)
GO Cellular Component (3): plasma membrane (GO:0005886), nuclear membrane (GO:0031965), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Class A/1 (Rhodopsin-like receptors) | 1 |
| GPCR downstream signalling | 1 |
| MITF-M-regulated melanocyte development | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| regulation of biological quality | 2 |
| G protein-coupled receptor signaling pathway | 2 |
| system development | 2 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| negative regulation of DNA-templated transcription | 1 |
| neural crest cell development | 1 |
| mesenchymal cell migration | 1 |
| renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure | 1 |
| protein secretion | 1 |
| signal release | 1 |
| regulation of heart contraction | 1 |
| monoatomic cation homeostasis | 1 |
| biological regulation | 1 |
| signal transduction | 1 |
| adenylate cyclase activity | 1 |
| negative regulation of catalytic activity | 1 |
| regulation of adenylate cyclase activity | 1 |
| phospholipase C activator activity | 1 |
| nervous system development | 1 |
| midgut development | 1 |
| anatomical structure development | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| macromolecule biosynthetic process | 1 |
| regulation of neuron maturation | 1 |
| neuron maturation | 1 |
| negative regulation of cell maturation | 1 |
| phasic smooth muscle contraction | 1 |
| vascular associated smooth muscle contraction | 1 |
| intracellular signaling cassette | 1 |
| proteoglycan metabolic process | 1 |
| pigment cell differentiation | 1 |
| G protein-coupled peptide receptor activity | 1 |
| endothelin receptor signaling pathway | 1 |
| hormone binding | 1 |
| angiotensin receptor binding | 1 |
| transmembrane signaling receptor activity | 1 |
| binding | 1 |
Protein interactions and networks
STRING
2346 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| EDNRB | EDN3 | P14138 | 999 |
| EDNRB | EDN1 | P05305 | 999 |
| EDNRB | EDN2 | P20800 | 998 |
| EDNRB | EDNRA | P25101 | 943 |
| EDNRB | ECE1 | P42892 | 906 |
| EDNRB | GDNF | P39905 | 901 |
| EDNRB | SOX10 | P56693 | 901 |
| EDNRB | KITLG | P21583 | 882 |
| EDNRB | RET | P07949 | 847 |
| EDNRB | GFRA1 | P56159 | 835 |
| EDNRB | POMC | P01189 | 752 |
| EDNRB | GNAQ | P50148 | 744 |
| EDNRB | ECE2 | P0DPD6 | 736 |
| EDNRB | PHOX2B | Q99453 | 730 |
| EDNRB | KIT | P10721 | 685 |
IntAct
15 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| EDNRB | RARS2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDNRB | EDN1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDN1 | EDNRB | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDNRB | RAMP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDNRB | RAMP2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | EDNRB | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDNRB | RAMP3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| EDNRB | PCNA | psi-mi:“MI:0915”(physical association) | 0.370 |
| EDNRB | psi-mi:“MI:0915”(physical association) | 0.370 | |
| KLRC4 | RAP1BL | psi-mi:“MI:0914”(association) | 0.350 |
| EDNRB | EXOC5 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (54): VPS8 (Affinity Capture-MS), C1orf112 (Affinity Capture-MS), LNPEP (Affinity Capture-MS), PXK (Affinity Capture-MS), EXOC2 (Affinity Capture-MS), ATM (Affinity Capture-MS), INTS12 (Affinity Capture-MS), ARFGEF1 (Affinity Capture-MS), KNTC1 (Affinity Capture-MS), THADA (Affinity Capture-MS), TYW1B (Affinity Capture-MS), PDXDC1 (Affinity Capture-MS), TNPO2 (Affinity Capture-MS), KIAA0368 (Affinity Capture-MS), ARFGEF2 (Affinity Capture-MS)
ESM2 similar proteins: A5A4L1, B2ZI34, O08725, O54799, O62709, P14600, P21450, P21451, P21729, P24053, P24530, P25101, P25103, P26684, P28088, P28336, P30547, P30548, P30550, P32304, P32305, P33534, P33535, P34975, P35372, P35463, P41144, P41145, P42866, P47211, P48302, P52500, P56479, P56497, P79350, Q29010, Q2KIP6, Q5DUB3, Q5IS39, Q5IS84
Diamond homologs: A1ZAX0, B2ZI34, E7F7V7, F1MV99, F1R332, O08726, O08786, O43603, O54798, O54799, O62709, O88626, O88854, O97666, O97772, O97967, P05363, P08911, P08912, P21451, P21729, P22270, P24053, P24530, P25101, P26684, P28088, P28336, P28646, P30550, P30551, P30552, P30553, P30796, P30872, P30873, P30937, P30974, P31391, P32238
SIGNOR signaling
11 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| EDN1 | up-regulates | EDNRB | binding |
| EDNRB | “up-regulates activity” | GNAS | binding |
| EDNRB | “up-regulates activity” | GNAL | binding |
| EDNRB | “up-regulates activity” | GNAI1 | binding |
| EDNRB | “up-regulates activity” | GNAI3 | binding |
| EDNRB | “up-regulates activity” | GNAO1 | binding |
| EDNRB | “up-regulates activity” | GNAZ | binding |
| EDNRB | “up-regulates activity” | GNAQ | binding |
| EDNRB | “up-regulates activity” | GNA14 | binding |
| Endothelin-1 | “up-regulates activity” | EDNRB | “chemical activation” |
| EDN3 | up-regulates | EDNRB | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
364 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 16 |
| Likely pathogenic | 17 |
| Uncertain significance | 217 |
| Likely benign | 70 |
| Benign | 13 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1341593 | NM_001122659.3(EDNRB):c.1194+1G>C | Pathogenic |
| 147734 | GRCh38/hg38 13q22.3-31.3(chr13:77061780-92460406)x1 | Pathogenic |
| 148828 | GRCh38/hg38 13q14.11-34(chr13:40942298-114340331)x1 | Pathogenic |
| 1498840 | NM_001122659.3(EDNRB):c.1194+2T>C | Pathogenic |
| 16640 | NM_001122659.3(EDNRB):c.601C>T (p.Arg201Ter) | Pathogenic |
| 2004757 | NM_001122659.3(EDNRB):c.913del (p.Ser305fs) | Pathogenic |
| 228342 | NM_001122659.3(EDNRB):c.618G>A (p.Trp206Ter) | Pathogenic |
| 2710904 | NM_001122659.3(EDNRB):c.5del (p.Gln2fs) | Pathogenic |
| 2717861 | NM_001122659.3(EDNRB):c.879T>A (p.Tyr293Ter) | Pathogenic |
| 2810375 | NM_001122659.3(EDNRB):c.449A>C (p.His150Pro) | Pathogenic |
| 2847500 | NM_001122659.3(EDNRB):c.194C>A (p.Ser65Ter) | Pathogenic |
| 3064541 | NM_001122659.3(EDNRB):c.292G>T (p.Glu98Ter) | Pathogenic |
| 3655713 | NC_000013.11:g.77900653CT[1] | Pathogenic |
| 4710105 | NM_001122659.3(EDNRB):c.1008G>A (p.Trp336Ter) | Pathogenic |
| 4729957 | NM_001122659.3(EDNRB):c.393C>A (p.Cys131Ter) | Pathogenic |
| 546018 | NM_001122659.3(EDNRB):c.306C>A (p.Tyr102Ter) | Pathogenic |
| 1064869 | NM_001122659.3(EDNRB):c.777del (p.Val260fs) | Likely pathogenic |
| 1333432 | NM_001122659.3(EDNRB):c.801+1G>T | Likely pathogenic |
| 1334125 | NM_001122659.3(EDNRB):c.801+2T>C | Likely pathogenic |
| 1510402 | NM_001122659.3(EDNRB):c.596+2T>C | Likely pathogenic |
| 2703295 | NM_001122659.3(EDNRB):c.802-1G>T | Likely pathogenic |
| 2703346 | NM_001122659.3(EDNRB):c.801+2T>A | Likely pathogenic |
| 2706961 | NM_001122659.3(EDNRB):c.482A>T (p.Lys161Met) | Likely pathogenic |
| 3039754 | NM_001122659.3(EDNRB):c.742A>T (p.Lys248Ter) | Likely pathogenic |
| 3087209 | NM_001122659.3(EDNRB):c.87_88dup (p.Gly30fs) | Likely pathogenic |
| 3601071 | NM_001122659.3(EDNRB):c.430G>T (p.Ala144Ser) | Likely pathogenic |
| 3601072 | NM_001122659.3(EDNRB):c.431C>T (p.Ala144Val) | Likely pathogenic |
| 3906467 | NM_001122659.3(EDNRB):c.661G>T (p.Glu221Ter) | Likely pathogenic |
| 425030 | NM_001122659.3(EDNRB):c.878dup (p.Tyr293Ter) | Likely pathogenic |
| 444319 | NM_001122659.3(EDNRB):c.879dup (p.Thr294fs) | Likely pathogenic |
SpliceAI
879 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 13:77901052:TCTTA:T | donor_loss | 1.0000 |
| 13:77901053:CTTA:C | donor_loss | 1.0000 |
| 13:77901054:TTA:T | donor_loss | 1.0000 |
| 13:77901055:TACC:T | donor_loss | 1.0000 |
| 13:77901056:A:AT | donor_loss | 1.0000 |
| 13:77901057:CCTG:C | donor_gain | 1.0000 |
| 13:77901203:TAAAA:T | acceptor_gain | 1.0000 |
| 13:77901204:AAAA:A | acceptor_gain | 1.0000 |
| 13:77901205:AAA:A | acceptor_gain | 1.0000 |
| 13:77901205:AAAC:A | acceptor_loss | 1.0000 |
| 13:77901206:AA:A | acceptor_gain | 1.0000 |
| 13:77901206:AACTA:A | acceptor_loss | 1.0000 |
| 13:77901207:AC:A | acceptor_loss | 1.0000 |
| 13:77901208:C:CC | acceptor_gain | 1.0000 |
| 13:77901208:C:T | acceptor_loss | 1.0000 |
| 13:77901209:T:C | acceptor_loss | 1.0000 |
| 13:77901210:A:C | acceptor_gain | 1.0000 |
| 13:77903151:TTTA:T | donor_loss | 1.0000 |
| 13:77903152:TTAC:T | donor_loss | 1.0000 |
| 13:77903153:TAC:T | donor_loss | 1.0000 |
| 13:77903360:TC:T | acceptor_loss | 1.0000 |
| 13:77903361:C:CA | acceptor_loss | 1.0000 |
| 13:77903362:T:A | acceptor_loss | 1.0000 |
| 13:77918086:TTTA:T | donor_loss | 1.0000 |
| 13:77918087:TTAC:T | donor_loss | 1.0000 |
| 13:77918088:TACCT:T | donor_loss | 1.0000 |
| 13:77918089:A:C | donor_loss | 1.0000 |
| 13:77898335:C:CC | acceptor_gain | 0.9900 |
| 13:77899968:C:CC | acceptor_gain | 0.9900 |
| 13:77901056:A:AC | donor_gain | 0.9900 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000001192 (13:77898081 T>A,C), RS1000023905 (13:77974777 G>A), RS1000141148 (13:77953384 C>A), RS1000181776 (13:77950535 TA>T), RS1000238309 (13:77937558 G>T), RS1000241458 (13:77944498 A>C), RS1000289414 (13:77927242 C>G), RS1000317596 (13:77917814 A>G), RS1000393216 (13:77933230 C>A,T), RS1000444083 (13:77933391 G>A,T), RS1000535680 (13:77955042 A>G), RS1000556109 (13:77914435 A>G), RS1000625370 (13:77908933 C>T), RS1000644844 (13:77948737 C>T), RS1000667144 (13:77910537 A>G)
Disease associations
OMIM: gene MIM:131244 | disease phenotypes: MIM:277580, MIM:193500, MIM:600155, MIM:600501, MIM:193510, MIM:617184, MIM:202550, MIM:220290, MIM:607197, MIM:142623
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| Waardenburg syndrome type 4A | Definitive | Autosomal dominant |
| Waardenburg syndrome type 2 | Supportive | Autosomal dominant |
| Waardenburg-Shah syndrome | Supportive | Autosomal dominant |
| Hirschsprung disease, susceptibility to, 2 | Limited | Unknown |
ClinGen Gene-Disease Validity (2)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| Waardenburg syndrome type 4A | Limited | AD |
| Waardenburg syndrome type 4A | Moderate | AR |
Mondo (12): Waardenburg syndrome type 4A (MONDO:0010192), Waardenburg syndrome (MONDO:0018094), hearing loss disorder (MONDO:0005365), Hirschsprung disease, susceptibility to, 2 (MONDO:0010833), ABCD syndrome (MONDO:0010895), Waardenburg syndrome type 2A (MONDO:0008671), mitochondrial DNA depletion syndrome 12A (cardiomyopathic type), autosomal dominant (MONDO:0014959), aganglionosis, total intestinal (MONDO:0008738), hearing loss, autosomal recessive (MONDO:0019588), Hirschsprung disease (MONDO:0018309), Waardenburg syndrome type 2 (MONDO:0019517), Waardenburg-Shah syndrome (MONDO:0019518)
Orphanet (7): Waardenburg-Shah syndrome (Orphanet:897), Waardenburg syndrome (Orphanet:3440), Hirschsprung disease (Orphanet:388), Rare genetic deafness (Orphanet:96210), Rare autosomal dominant non-syndromic sensorineural deafness type DFNA (Orphanet:90635), Rare autosomal recessive non-syndromic sensorineural deafness type DFNB (Orphanet:90636), ABCD syndrome (Orphanet:918)
HPO phenotypes
62 total (30 of 62 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000077 | Abnormality of the kidney |
| HP:0000365 | Hearing impairment |
| HP:0000366 | Abnormality of the nose |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000426 | Prominent nasal bridge |
| HP:0000430 | Underdeveloped nasal alae |
| HP:0000431 | Wide nasal bridge |
| HP:0000478 | Abnormality of the eye |
| HP:0000504 | Abnormality of vision |
| HP:0000506 | Telecanthus |
| HP:0000508 | Ptosis |
| HP:0000534 | Abnormal eyebrow morphology |
| HP:0000635 | Blue irides |
| HP:0000639 | Nystagmus |
| HP:0000664 | Synophrys |
| HP:0001022 | Albinism |
| HP:0001053 | Hypopigmented skin patches |
| HP:0001100 | Heterochromia iridis |
| HP:0001103 | Abnormal macular morphology |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001263 | Global developmental delay |
| HP:0001271 | Polyneuropathy |
| HP:0001341 | Olfactory lobe agenesis |
| HP:0001510 | Growth delay |
| HP:0001520 | Large for gestational age |
| HP:0001531 | Failure to thrive in infancy |
| HP:0001561 | Polyhydramnios |
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000892_9 | Total ventricular volume (Alzheimer’s disease interaction) | 7.000000e-06 |
| GCST001932_1 | Hair color | 2.000000e-14 |
| GCST004412_10 | Craniofacial microsomia | 8.000000e-06 |
| GCST006075_16 | Hair color | 1.000000e-100 |
| GCST90000025_1053 | Appendicular lean mass | 2.000000e-35 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003924 | hair color |
| EFO:0004980 | appendicular lean mass |
MeSH disease descriptors (8)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D034381 | Hearing Loss | C09.218.458.341; C10.597.751.418.341; C23.888.592.763.393.341 |
| D006627 | Hirschsprung Disease | C06.198.439; C06.405.469.158.701.439; C16.131.314.439 |
| D014849 | Waardenburg Syndrome | C16.131.077.938 |
| C535334 | ABCD syndrome (supp.) | |
| C538058 | Aganglionosis, total intestinal (supp.) | |
| C564609 | Deafness, Autosomal Recessive (supp.) | |
| C536463 | Waardenburg syndrome type 2 (supp.) | |
| C536464 | Waardenburg syndrome type 2A (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL1785 (SINGLE PROTEIN), CHEMBL2096678 (PROTEIN FAMILY)
Molecules with ChEMBL bioactivity
16 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 87,774 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1111 | AMBRISENTAN | 4 | 7,009 |
| CHEMBL1373 | MODAFINIL | 4 | 14,293 |
| CHEMBL2103873 | MACITENTAN | 4 | 1,372 |
| CHEMBL2165326 | APROCITENTAN | 4 | 165 |
| CHEMBL282724 | SITAXENTAN | 4 | 639 |
| CHEMBL453 | SULFISOXAZOLE | 4 | 21,363 |
| CHEMBL781 | MAZINDOL | 4 | 16,446 |
| CHEMBL957 | BOSENTAN | 4 | 16,499 |
| CHEMBL109648 | CLAZOSENTAN | 3 | 244 |
| CHEMBL23261 | DARUSENTAN | 3 | 357 |
| CHEMBL3989834 | AVOSENTAN | 3 | 364 |
| CHEMBL61780 | TEZOSENTAN | 3 | 8,374 |
| CHEMBL9194 | ATRASENTAN | 3 | 472 |
| CHEMBL316735 | FELOPRENTAN | 2 | 17 |
| CHEMBL431651 | ENRASENTAN | 2 | 160 |
| CHEMBL437472 | ENDOTHELIN | 2 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Endothelin receptors
Most potent curated ligand interactions (24 total), top 24:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| endothelin-3 | Full agonist | 11.5 | pKd |
| [125I]IRL1620 | Full agonist | 10.1 | pKd |
| [125I]BQ3020 | Full agonist | 10.0 | pKd |
| [125I]ET-1 (human, mouse, rat) | Full agonist | 10.0 | pKd |
| sarafotoxin S6c | Full agonist | 9.8 | pKd |
| [125I][Ala1,3,11,15]ET-1 | Full agonist | 9.7 | pKd |
| BQ 3020 | Full agonist | 9.7 | pKi |
| SB209670 | Antagonist | 9.4 | pKB |
| [Ala1,3,11,15]ET-1 | Full agonist | 9.2 | pKd |
| sovateltide | Full agonist | 8.7 | pKi |
| TAK 044 | Antagonist | 8.4 | pA2 |
| K-8794 | Antagonist | 8.22 | pIC50 |
| A192621 | Antagonist | 8.1 | pKd |
| BQ788 | Antagonist | 8.0 | pKd |
| RES7011 | Antagonist | 8.0 | pIC50 |
| Ro 46-8443 | Antagonist | 7.2 | pIC50 |
| IRL 2500 | Antagonist | 7.2 | pKd |
| bosentan | Antagonist | 7.1 | pKi |
| atrasentan | Antagonist | 6.86 | pKi |
| clazosentan | Antagonist | 6.76 | pKi |
| macitentan | Antagonist | 6.41 | pIC50 |
| ambrisentan | Antagonist | 5.92 | pIC50 |
| aprocitentan | Antagonist | 5.5 | pA2 |
| BMS-193884 | Antagonist | 4.73 | pKi |
Binding affinities (BindingDB)
7 measured of 8 human assays (8 total across all organisms); most potent 7 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| J-104132 | KI | 0.1 nM |
| (1S,2R,3S)-1-Benzo[1,3]dioxol-5-yl-3-(2-carboxymethoxy-4-methoxy-phenyl)-5-propoxy-indan-2-carboxylic acid | KI | 21 nM |
| 4-tert-butyl-N-[6-(2-hydroxyethoxy)-5-(2-methoxyphenoxy)-2,2’-bipyrimidin-4-yl]benzenesulfonamide | KI | 102 nM |
| Enrasentan | KI | 150 nM |
| SB-234551 | KI | 500 nM |
| SR 147778 | KI | 1000 nM |
| PD156707 | KI | 1420 nM |
ChEMBL bioactivities
1034 potent at pChembl≥5 of 1265 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.77 | Ki | 0.017 | nM | ENDOTHELIN 3 |
| 10.52 | IC50 | 0.03 | nM | ENDOTHELIN 3 |
| 10.40 | IC50 | 0.04 | nM | ENDOTHELIN 3 |
| 10.28 | Ki | 0.052 | nM | ENDOTHELIN 3 |
| 10.22 | Ki | 0.06 | nM | ENDOTHELIN |
| 10.04 | IC50 | 0.091 | nM | ENDOTHELIN 3 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3980643 |
| 9.89 | IC50 | 0.13 | nM | ENDOTHELIN |
| 9.85 | IC50 | 0.14 | nM | CHEMBL325581 |
| 9.85 | Ki | 0.14 | nM | CHEMBL310039 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL419367 |
| 9.70 | IC50 | 0.2 | nM | ENDOTHELIN |
| 9.68 | IC50 | 0.208 | nM | SARAFOTOXIN 6C |
| 9.68 | Ki | 0.21 | nM | CHEMBL433106 |
| 9.64 | Ki | 0.23 | nM | CHEMBL72924 |
| 9.64 | Ki | 0.23 | nM | CHEMBL308102 |
| 9.64 | Ki | 0.23 | nM | CHEMBL305462 |
| 9.62 | Ki | 0.24 | nM | CHEMBL306950 |
| 9.62 | Ki | 0.24 | nM | CHEMBL72348 |
| 9.57 | IC50 | 0.27 | nM | CHEMBL339657 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL111277 |
| 9.47 | Ki | 0.34 | nM | CHEMBL310920 |
| 9.42 | Ki | 0.38 | nM | CHEMBL73373 |
| 9.42 | Ki | 0.38 | nM | CHEMBL73000 |
| 9.41 | Ki | 0.39 | nM | CHEMBL307471 |
| 9.39 | IC50 | 0.41 | nM | CHEMBL1515091 |
| 9.33 | IC50 | 0.47 | nM | CHEMBL323464 |
| 9.32 | IC50 | 0.48 | nM | CHEMBL109644 |
| 9.31 | Ki | 0.49 | nM | CHEMBL307045 |
| 9.30 | Ki | 0.5 | nM | CHEMBL308269 |
| 9.23 | IC50 | 0.59 | nM | A-192621 |
| 9.23 | Ki | 0.59 | nM | CHEMBL307384 |
| 9.22 | IC50 | 0.6 | nM | CHEMBL323464 |
| 9.22 | Ki | 0.6 | nM | CHEMBL307470 |
| 9.15 | IC50 | 0.71 | nM | CHEMBL332289 |
| 9.15 | Ki | 0.7 | nM | CHEMBL73835 |
| 9.12 | Ki | 0.76 | nM | CHEMBL70686 |
| 9.10 | IC50 | 0.8 | nM | A-192621 |
| 9.10 | IC50 | 0.8 | nM | CHEMBL333972 |
| 9.10 | IC50 | 0.8 | nM | CHEMBL284250 |
| 9.10 | Ki | 0.79 | nM | CHEMBL73697 |
| 9.08 | IC50 | 0.83 | nM | CHEMBL325581 |
| 9.07 | IC50 | 0.85 | nM | CHEMBL331625 |
| 9.03 | IC50 | 0.94 | nM | CHEMBL123316 |
| 9.00 | Ki | 1 | nM | CHEMBL72410 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL331625 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL73925 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL330895 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL332109 |
| 8.95 | IC50 | 1.12 | nM | CHEMBL109644 |
PubChem BioAssay actives
834 with measured affinity, of 1842 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (3S)-3-[[(2S)-2-[[(2S)-2-[[(1R,4S,7S,10S,13S,16S,19S,22S,25R,28S,31R,36R,39S,42S,45S)-31-amino-7,13-bis(4-aminobutyl)-22,39-dibenzyl-4-(2-carboxyethyl)-10-(carboxymethyl)-19,28-bis[(1R)-1-hydroxyethyl]-16,42-bis[(4-hydroxyphenyl)methyl]-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-45-propan-2-yl-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-5-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-[[(2S,3S)-1-[[(2S,3S)-1-[[(1S)-1-carboxy-2-(1H-indol-3-yl)ethyl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-oxobutanoic acid | 1336323: Displacement of [125I]endothelin-1 from human recombinant ETB receptor expressed in CHO cells measured after 120 mins by scintillation counting method | ic50 | <0.0001 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-2-[[(1R,4S,7S,10S,13S,16S,19S,22S,25R,28S,31R,36R,39S,42S,45S)-31-amino-7-(4-aminobutyl)-39-benzyl-4-(2-carboxyethyl)-10-(carboxymethyl)-19,22,28-tris(hydroxymethyl)-42-[(4-hydroxyphenyl)methyl]-16-(1H-indol-3-ylmethyl)-13-(2-methylpropyl)-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-45-propan-2-yl-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-5-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-[[(2S,3S)-1-[[(2S,3S)-1-[[(1S)-1-carboxy-2-(1H-indol-3-yl)ethyl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-oxobutanoic acid | 1285630: Displacement of [125I]Endothelin-1 from human recombinant Endothelin-B receptor expressed in CHO cells | ic50 | <0.0001 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-2-[[(1S,4S,7S,10R,13S,16R,19S,22R,25R,28R,31S,36R,39S,42R,45S)-31-amino-7,13-bis(4-aminobutyl)-22-benzyl-4-(2-carboxyethyl)-10-(carboxymethyl)-28-[(1R)-1-hydroxyethyl]-19-[(1S)-1-hydroxyethyl]-16-[2-(4-hydroxyphenyl)ethyl]-39,42-bis[(4-hydroxyphenyl)methyl]-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-45-propan-2-yl-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-[[(2S,3S)-1-[[(2S,3S)-1-[[(1S)-1-carboxy-2-(1H-indol-3-yl)ethyl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-oxobutanoic acid | 751885: Binding affinity to human ETB receptor by radioligand displacement assay | ki | <0.0001 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[3-chloropropylsulfonyl(propyl)amino]ethyl]-2-(3-fluoro-4-methoxyphenyl)pyrrolidine-3-carboxylic acid | 66376: Binding assay performed using human Endothelin B receptor (hETB) expressed in chinese hamster ovary cells(CHO) | ic50 | 0.0001 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-2-[[(1R,4S,7S,10S,13S,16S,19S,22S,25R,28S,31R,36R,39S,42S,45S)-31-amino-7-(4-aminobutyl)-39-benzyl-4-(2-carboxyethyl)-10-(carboxymethyl)-19,22,28-tris(hydroxymethyl)-42-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-13-(2-methylsulfanylethyl)-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-45-propan-2-yl-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-5-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-[[(2S,3S)-1-[[(2S,3S)-1-[[(2S)-1-amino-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-oxobutanoic acid | 1323189: Agonist activity at human recombinant ETB receptor expressed in CHOK1 cells assessed as induction of Ca2+ mobilization by fluorimetric method | ic50 | 0.0001 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-2-[[(1S,4S,7S,10R,13S,16R,19S,22R,25R,28R,31S,36R,39S,42R,45S)-31-amino-7-(4-aminobutyl)-39-benzyl-4-(2-carboxyethyl)-10-(carboxymethyl)-19,22,28-tris(hydroxymethyl)-42-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-13-(2-methylsulfanylethyl)-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-45-propan-2-yl-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-[[(2S,3S)-1-[[(2S,3S)-1-[[(1S)-1-carboxy-2-(1H-indol-3-yl)ethyl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-oxobutanoic acid | 751683: Displacement of [125I]Endothelin-1 from human recombinant ETB receptor expressed in CHOK1 cells after 2 hrs | ki | 0.0001 | uM |
| N-[(2R)-1-[[(2S)-1-(ethenylsulfonylamino)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0001 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-2-(3-fluoro-4-methoxyphenyl)-1-[2-[propyl(4,4,4-trifluorobutylsulfonyl)amino]ethyl]pyrrolidine-3-carboxylic acid | 66376: Binding assay performed using human Endothelin B receptor (hETB) expressed in chinese hamster ovary cells(CHO) | ic50 | 0.0002 | uM |
| N-[(2R)-1-[[(2S)-3-(1H-indol-3-yl)-1-oxo-1-(prop-2-enylsulfonylamino)propan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-(4-thiophen-3-ylphenyl)propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-[4-(1,2-oxazol-5-yl)phenyl]propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| N-[(2R)-1-[[(2S)-3-(1H-indol-3-yl)-1-oxo-1-(propylsulfonylamino)propan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| N-[(2R)-1-[[(2S)-1-(2-ethoxyethylsulfonylamino)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| N-[(2R)-1-[[(2S)-1-(butylsulfonylamino)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0002 | uM |
| (3S)-3-[[(2S)-5-amino-2-[[(2S)-2-[[(1R,4S,7S,10S,13S,16S,19S,22S,25R,28S,31R,36R,39S,42S,45S)-31-amino-22,42-bis(2-amino-2-oxoethyl)-39-benzyl-4,7-bis(2-carboxyethyl)-10,19-bis(carboxymethyl)-13,28-bis[(1R)-1-hydroxyethyl]-45-(2-methylpropyl)-16-(2-methylsulfanylethyl)-3,6,9,12,15,18,21,24,27,30,38,41,44,47-tetradecaoxo-33,34,49,50-tetrathia-2,5,8,11,14,17,20,23,26,29,37,40,43,46-tetradecazabicyclo[23.22.4]henpentacontane-36-carbonyl]amino]-3-(1H-imidazol-5-yl)propanoyl]amino]-5-oxopentanoyl]amino]-4-[[(2S)-1-[[(2S,3S)-1-[[(1S)-1-carboxy-2-(1H-indol-3-yl)ethyl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-4-oxobutanoic acid | 699136: Displacement of [I125]ET1 from recombinant ETB receptor expressed in CHO cells after 2 hrs by TopCount analysis | ic50 | 0.0002 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-(2,6-diethylanilino)-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0003 | uM |
| N-[(2R)-1-[[(2S)-1-(benzenesulfonamido)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0003 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-2-(3-fluoro-4-methoxyphenyl)-1-[2-[pentylsulfonyl(propyl)amino]ethyl]pyrrolidine-3-carboxylic acid | 2150548: Antagonist activity at human ETB receptor transfected in CHO cell membrane assessed as inhibition of 125I-labelled ET-3 binding to receptor incubated for 3 hrs by competition binding assay | ic50 | 0.0003 | uM |
| sodium (2R)-2-[[(2R)-2-[[(2S)-2-[[(2S,6R)-2,6-dimethylpiperidine-1-carbonyl]amino]-4,4-dimethylpentanoyl]amino]-3-(1-methoxycarbonylindol-3-yl)propanoyl]amino]hexanoate | 1323191: Antagonist activity at ETB receptor in human BSMC assessed as inhibition of endothelin-1 or 3-mediated Ca2+ mobilization preincubated for 5 mins followed by endothelin-1 or 3 addition by fura-2/AM dye-based spectrofluorimetric method | ic50 | 0.0004 | uM |
| N-[(2R)-1-[[(2S)-3-(1H-indol-3-yl)-1-oxo-1-[[(E)-prop-1-enyl]sulfonylamino]propan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0004 | uM |
| N-[(2R)-1-[[(2S)-3-(1H-indol-3-yl)-1-oxo-1-(propan-2-ylsulfonylamino)propan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0004 | uM |
| N-[(2R)-1-[[(2S)-1-(ethylsulfonylamino)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0004 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[butylsulfonyl(propyl)amino]ethyl]-2-(3-fluoro-4-methoxyphenyl)pyrrolidine-3-carboxylic acid | 66376: Binding assay performed using human Endothelin B receptor (hETB) expressed in chinese hamster ovary cells(CHO) | ic50 | 0.0005 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-2-(3-fluoro-4-methoxyphenyl)-1-[2-[hexylsulfonyl(propyl)amino]ethyl]pyrrolidine-3-carboxylic acid | 66376: Binding assay performed using human Endothelin B receptor (hETB) expressed in chinese hamster ovary cells(CHO) | ic50 | 0.0005 | uM |
| N-[(2R)-1-[[1-(butylsulfonylamino)-4-methylsulfanyl-1-oxobutan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0005 | uM |
| N-[(2R)-1-[[(2S)-1-(benzylsulfonylamino)-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0005 | uM |
| N-[(2R)-1-[[1-(butylsulfonylamino)-3-naphthalen-2-yl-1-oxopropan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0006 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-(4-thiophen-2-ylphenyl)propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0006 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-(2,6-diethylanilino)-2-oxoethyl]-2-(4-propoxyphenyl)pyrrolidine-3-carboxylic acid | 2150564: Antagonist activity at human ETB receptor transfected in CHO cell membrane assessed as inhibition of phosphatidylinositol hydrolysis by myo-[3H]inositol radioactivity based assay | ic50 | 0.0006 | uM |
| N-[(2R)-1-[[1-(butylsulfonylamino)-1-oxobutan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0007 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[(2,2-dimethyl-1-phenylpropyl)amino]-2-oxoethyl]-2-[4-(2-propan-2-yloxyethoxy)phenyl]pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0007 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-(2,6-diethyl-4-fluoroanilino)-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0008 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-(2,6-diethylanilino)-2-oxoethyl]-2-[4-(2-methoxyethoxy)phenyl]pyrrolidine-3-carboxylic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0008 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-[4-(furan-2-yl)phenyl]propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0008 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-[4-(1,2-oxazol-3-yl)phenyl]propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0008 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[(2,2-dimethyl-1-phenylpropyl)amino]-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0009 | uM |
| (2S)-2-[[(2R)-2-[(3,5-dimethylbenzoyl)-methylamino]-3-(4-phenylphenyl)propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid | 66852: Binding affinity to Endothelin B receptor | ki | 0.0010 | uM |
| 2-[[(2R)-3-(2-bromo-1H-indol-3-yl)-2-[[2-cyclopropyl-2-[[(2S,6R)-2,6-dimethylpiperidine-1-carbonyl]amino]acetyl]amino]propanoyl]amino]hexanoic acid | 66374: Binding affinity towards Endothelin B receptor in human girardi heart cell membranes | ic50 | 0.0011 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[(2-ethyl-1-phenylbutyl)amino]-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0011 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[bis(2-methylphenyl)methylamino]-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0011 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-(2,6-diethylanilino)-2-oxoethyl]-2-(4-ethoxyphenyl)pyrrolidine-3-carboxylic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0012 | uM |
| sodium (2R)-2-[[(2R)-2-[[(2S)-2-[[(2R,6S)-2,6-dimethylpiperidine-1-carbonyl]amino]-4,4-dimethylpentanoyl]amino]-3-(1-methoxycarbonylindol-2-yl)propanoyl]amino]hexanoate | 1475132: Antagonist activity at ETB receptor (unknown origin) expressed in HEK293T cells measured after 30 mins by CCF4-AM dye based GeneBlazer FRET assay | ic50 | 0.0012 | uM |
| sodium (2S)-2-[[(2R)-2-[[(2R)-2-[[(2S,6R)-2,6-dimethylpiperidine-1-carbonyl]amino]-4,4-dimethylpentanoyl]amino]-3-(1-methoxycarbonylindol-3-yl)propanoyl]amino]hexanoate | 1631615: Displacement of [125I]ET-1 from ET-B receptor in human Girardi heart cells incubated for 4 hrs by gamma counting method | ic50 | 0.0012 | uM |
| (4S)-4-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2R,5S,8R,17R)-17-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-amino-3-phenylpropanoyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-4-methylpentanoyl]amino]-4-methylpentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-4-carboxybutanoyl]amino]-3-methylbutanoyl]amino]-4-methylpentanoyl]amino]-4-carboxybutanoyl]amino]hexanoyl]amino]-2-[3-(diaminomethylideneamino)propyl]-5-methyl-3,6,14,18-tetraoxo-1,4,7,13-tetrazacyclooctadecane-8-carbonyl]amino]-5-oxopentanoyl]amino]-4-methylpentanoyl]amino]propanoyl]amino]-5-oxopentanoyl]amino]-5-oxopentanoyl]amino]propanoyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]hexanoyl]amino]-4-methylpentanoyl]amino]hexanoyl]amino]-5-[[(2S,3S)-1-[[(2S,3S)-1-amino-3-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0012 | uM |
| N-[(2R)-1-[[(2S)-1-(butylsulfonylamino)-3-methyl-1-oxobutan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66687: Compound was tested for the binding affinity against Endothelin B receptor | ki | 0.0012 | uM |
| N-[(2R)-1-[[1-(butylsulfonylamino)-4-methyl-1-oxopentan-2-yl]amino]-3-[4-(1,2-oxazol-5-yl)phenyl]-1-oxopropan-2-yl]-N,3,5-trimethylbenzamide | 66852: Binding affinity to Endothelin B receptor | ki | 0.0013 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-2-(4-methoxyphenyl)-1-[2-oxo-2-(2,4,6-triethylanilino)ethyl]pyrrolidine-3-carboxylic acid | 66515: Binding affinity towards human Endothelin B receptor (hET -B) | ic50 | 0.0015 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[bis(2-methylphenyl)methylamino]-2-oxoethyl]-2-[4-(2-methoxyethoxy)phenyl]pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0017 | uM |
| (2R,3R,4S)-4-(1,3-benzodioxol-5-yl)-1-[2-[bis(2-methylphenyl)methylamino]-2-oxoethyl]-2-[4-(2-propan-2-yloxyethoxy)phenyl]pyrrolidine-3-carboxylic acid;2,2,2-trifluoroacetic acid | 66514: Binding ability determined by the displacement of [125 I]ET-3 from the human Endothelin B receptor | ic50 | 0.0019 | uM |
| N-[3-[6-[(4-tert-butylphenyl)sulfonylamino]-2-cyclopropyl-5-(2-methoxyphenoxy)pyrimidin-4-yl]oxypropyl]thiophene-2-sulfonamide | 66539: Inhibitory concentration required against [125I]ET1 binding to membranes of CHO cells expressing human ETB receptor | ic50 | 0.0020 | uM |
CTD chemical–gene interactions
77 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | increases expression, affects expression, affects cotreatment | 8 |
| bisphenol A | affects cotreatment, increases methylation, increases expression | 3 |
| trichostatin A | affects cotreatment, increases expression | 3 |
| Tetrachlorodibenzodioxin | affects reaction, increases expression, affects expression, decreases expression | 3 |
| sodium arsenite | decreases reaction, increases expression | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| belinostat | increases expression, affects cotreatment | 2 |
| Arsenic Trioxide | decreases expression, increases expression | 2 |
| Vorinostat | affects cotreatment, increases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Acetaminophen | decreases expression, increases expression | 2 |
| Indomethacin | decreases reaction, increases activity, affects cotreatment, increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Progesterone | affects cotreatment, decreases expression, increases expression | 2 |
| testosterone enanthate | affects expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| lead acetate | increases expression | 1 |
| methylselenic acid | increases expression | 1 |
| nimesulide | decreases reaction, increases activity | 1 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| 1,2-dielaidoylphosphatidylethanolamine | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| mercuric bromide | increases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| paricalcitol | affects cotreatment, affects expression | 1 |
| BQ 788 | affects binding, decreases activity | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| enrasentan | decreases activity, affects binding | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| rofecoxib | decreases reaction, increases activity | 1 |
ChEMBL screening assays
270 unique, capped per target: 229 binding, 41 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1031404 | Binding | Inhibition of human endothelin ETB receptor at 3 uM | Discovery of substituted 4-(pyrazol-4-yl)-phenylbenzodioxane-2-carboxamides as potent and highly selective Rho kinase (ROCK-II) inhibitors. — J Med Chem |
| CHEMBL1071210 | Functional | Agonist activity at ETBR up to 30 uM | The first synthetic agonists of FFA2: Discovery and SAR of phenylacetamides as allosteric modulators. — Bioorg Med Chem Lett |
Cellosaurus cell lines
8 cell lines: 3 transformed cell line, 3 cancer cell line, 2 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A5PZ | COS-7 1C7 | Transformed cell line | Male |
| CVCL_H427 | CHO-K1/EDNRB | Spontaneously immortalized cell line | Female |
| CVCL_KX00 | PathHunter CHO-K1 EDNRB beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_LA26 | PathHunter U2OS EDNRB Total GPCR Internalization | Cancer cell line | Female |
| CVCL_T419 | Psi-CRIP-Rx-ETBR-bsr | Transformed cell line | Male |
| CVCL_YK44 | U2OS EDNRB HiTSeeker | Cancer cell line | Female |
| CVCL_YK70 | U2OS MPX-Nomad ETBR | Cancer cell line | Female |
| CVCL_YU25 | GeneBLAzer EDNRB-NFAT-bla HEK 293T | Transformed cell line | Female |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00205881 | PHASE4 | COMPLETED | Bilateral Benefit in Adult Users of the HiRes 90K Bionic Ear System |
| NCT00331539 | PHASE4 | UNKNOWN | Relationship Between Auto NRT and Behavioural T & C Levels With the Nucleus Freedom Cochlear Implant |
| NCT00424307 | PHASE4 | UNKNOWN | Bilateral Cochlear Implant Benefit in Young Children |
| NCT00765635 | PHASE4 | COMPLETED | Chlorobutanol, Potassium Carbonate, and Irrigation in Cerumen Removal |
| NCT03321006 | PHASE4 | COMPLETED | Treating Hearing Loss to Improve Mood and Cognition in Older Adults |
| NCT01499901 | PHASE3 | WITHDRAWN | Comparison of the Bilateral Sequential and Simultaneous Cochlear Implantation in the Deaf Children |
| NCT02561091 | PHASE3 | COMPLETED | AM-111 in the Treatment of Acute Inner Ear Hearing Loss |
| NCT03331627 | PHASE3 | COMPLETED | Safety and Efficacy of STR001-IT and STR001-ER in Patients With SSHL |
| NCT05532657 | PHASE3 | ACTIVE_NOT_RECRUITING | ACHIEVE Brain Health Follow-Up Study |
| NCT00013455 | PHASE2 | COMPLETED | Quantifying Auditory Perceptual Learning Following Hearing Aid Fitting |
| NCT00323427 | PHASE2 | COMPLETED | Clinical Trial of the Living Well With Hearing Loss Workshop |
| NCT00552786 | PHASE2 | COMPLETED | Antioxidation Medication for Noise-induced Hearing Loss |
| NCT00802425 | PHASE2 | COMPLETED | Efficacy of AM-111 in Patients With Acute Sensorineural Hearing Loss |
| NCT01139281 | PHASE2 | COMPLETED | The Protective Effect of Ginkgo Biloba Extract on Cisplatin-induced Ototoxicity in Humans |
| NCT01451853 | PHASE2 | UNKNOWN | SPI-1005 for Prevention and Treatment of Chemotherapy Induced Hearing Loss |
| NCT01588925 | PHASE2 | COMPLETED | Hearing Preservation Using Dexamethasone and Hyaluronic Acid for Cochlear Implantation |
| NCT01773278 | PHASE2 | RECRUITING | Cholesterol and Antioxidant Treatment in Patients With Smith-Lemli-Opitz Syndrome (SLOS) |
| NCT02832128 | PHASE2 | COMPLETED | Evaluating Possible Improvement in Speech and Hearing Tests After 28 Days of Dosing of the Study Drug AUT00063 Compared to Placebo (QuicKfire) |
| NCT04915183 | PHASE2 | RECRUITING | Atorvastatin to Reduce Cisplatin-Induced Hearing Loss Among Individuals With Head and Neck Cancer |
| NCT05258773 | PHASE2 | COMPLETED | Evaluation of the Presence of SENS-401 in the Perilymph |
| NCT06340633 | PHASE2 | RECRUITING | SPI-1005 in Adults Receiving Cochlear Implant |
| NCT00582946 | PHASE1 | COMPLETED | Wide-Bandwidth Open Canal Hearing Aid For Better Multitalker Speech Understanding |
| NCT00584155 | PHASE1 | WITHDRAWN | Protection From Cisplatin Ototoxicity by Lactated Ringers |
| NCT01206829 | PHASE1 | UNKNOWN | Hearing Impairment, Cognitive Therapy and Coping |
| NCT01256229 | PHASE1 | COMPLETED | Outcomes In Children With Developmental Delay And Deafness |
| NCT01343394 | PHASE1 | WITHDRAWN | Safety of Autologous Human Umbilical Cord Blood Mononuclear Fraction to Treat Acquired Hearing Loss in Children |
| NCT01452607 | PHASE1 | COMPLETED | Study to Evaluate the Safety and Pharmacokinetics of SPI-1005 |
| NCT02259595 | PHASE1 | COMPLETED | Study to Determine the Safety, Tolerability, and Pharmacokinetic Profile of HPN-07 and HPN-07 Plus NAC |
| NCT04041440 | PHASE1 | COMPLETED | Speech Recognition Training in Children With Hearing Loss |
| NCT07218913 | PHASE1 | RECRUITING | Testing the Addition of Pedmark to Cisplatin Chemotherapy for Reducing Drug-Induced Ear Damage in Men With Stage II-III Metastatic Testicular Germ Cell Tumors |
| NCT02418936 | Not specified | UNKNOWN | Development and Clinical Application of Two New Genetic Deafness Gene Diagnostic Kit |
| NCT00486577 | PHASE2/PHASE3 | COMPLETED | Chronic Electrical Stimulation of the Auditory Cortex for Intractable Tinnitus |
| NCT00789061 | PHASE2/PHASE3 | UNKNOWN | Applying Proton Pump Inhibitor to Prevent and Treat Acute Fluctuating Hearing Loss in Patients With SLC26A4 Mutation |
| NCT01423409 | PHASE2/PHASE3 | COMPLETED | Multicenter Trial Assessing an Innovative VAS of Pain Among Deaf People |
| NCT05786378 | PHASE2/PHASE3 | UNKNOWN | Assessment of The Efficacy of Intratympanic Platelet Rich Plasma for Treatment of Sensorineural Hearing Loss. |
| NCT01108601 | PHASE1/PHASE2 | UNKNOWN | Transtympanic Ringer’s Lactate for the Prevention of Cisplatin Ototoxicity |
| NCT01621256 | PHASE1/PHASE2 | COMPLETED | Efficacy, Safety, and Tolerability of Ancrod in Patients With Sudden Hearing Loss |
| NCT06370351 | PHASE1/PHASE2 | RECRUITING | A Phase I/II Clinical Trial with SENS-501 in Children Suffering from Severe to Profound Hearing Loss Due to Otoferlin (OTOF) Mutations |
| NCT06545175 | PHASE1/PHASE2 | RECRUITING | Intracochlear Application of VSF1.01 for the Reduction of Cochlear Implant Surgery Related Trauma |
| NCT07304024 | PHASE1/PHASE2 | RECRUITING | A Treatment for a Form of Age-Related Central Auditory Processing Disorder Consisting of Clemastine Fumarate Plus Engineered Sound |
Related Atlas pages
- Associated diseases: Waardenburg syndrome type 4A, Hirschsprung disease, susceptibility to, 2, Waardenburg syndrome type 2
- Targeted by drugs: Ambrisentan, Aprocitentan, Atrasentan, Bosentan, Clazosentan, Macitentan, Sovatelitide
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): ABCD syndrome, aganglionosis, total intestinal, craniofacial microsomia, Hirschsprung disease, Hirschsprung disease, susceptibility to, 2, mitochondrial DNA depletion syndrome 12A (cardiomyopathic type), autosomal dominant, Waardenburg syndrome, Waardenburg syndrome type 2, Waardenburg syndrome type 2A, Waardenburg syndrome type 4A, Waardenburg-Shah syndrome