EDRF1-AS1

Summary

EDRF1-AS1 (EDRF1 antisense RNA 1, HGNC:49501) is a long non-coding RNA gene on chromosome 10q26.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49501
Approved symbol	EDRF1-AS1
Name	EDRF1 antisense RNA 1
Location	10q26.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236991
Ensembl biotype	lncRNA
Entrez	101927983
RNAcentral	URS000058EA85 — lncRNA, 712 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000449436, ENST00000593871, ENST00000594025, ENST00000600784, ENST00000601363, ENST00000602030, ENST00000610534, ENST00000612306, ENST00000612420, ENST00000613304, ENST00000615461, ENST00000615795, ENST00000621717, ENST00000622798, ENST00000625908, ENST00000627990, ENST00000630227

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000449436 — 4 exons

Exon	Start	End
ENSE00001601005	125749375	125749528
ENSE00001623120	125744727	125744890
ENSE00001705004	125750440	125750466
ENSE00001719644	125745539	125745698

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 85.20.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0060 / max 6.7663, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
206047	0.0060	3

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	85.20	gold quality
testis	UBERON:0000473	84.48	gold quality
right testis	UBERON:0004534	84.24	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.23	gold quality
corpus callosum	UBERON:0002336	78.75	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.51	gold quality
bone marrow	UBERON:0002371	77.31	gold quality
body of pancreas	UBERON:0001150	75.20	gold quality
colonic epithelium	UBERON:0000397	74.28	gold quality
monocyte	CL:0000576	74.09	gold quality
mucosa of stomach	UBERON:0001199	73.57	gold quality
leukocyte	CL:0000738	73.53	gold quality
calcaneal tendon	UBERON:0003701	72.59	gold quality
left ovary	UBERON:0002119	71.97	gold quality
bone marrow cell	CL:0002092	71.55	silver quality
pancreas	UBERON:0001264	71.41	gold quality
adrenal tissue	UBERON:0018303	71.05	gold quality
ovary	UBERON:0000992	70.91	gold quality
rectum	UBERON:0001052	70.91	gold quality
fundus of stomach	UBERON:0001160	70.62	gold quality
right ovary	UBERON:0002118	70.60	gold quality
minor salivary gland	UBERON:0001830	70.24	gold quality
saliva-secreting gland	UBERON:0001044	70.16	gold quality
tonsil	UBERON:0002372	69.89	gold quality
small intestine Peyer’s patch	UBERON:0003454	69.87	gold quality
smooth muscle tissue	UBERON:0001135	69.79	gold quality
body of uterus	UBERON:0009853	69.60	gold quality
ectocervix	UBERON:0012249	69.38	gold quality
descending thoracic aorta	UBERON:0002345	69.36	gold quality
cortical plate	UBERON:0005343	69.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.