EEF1A1-AS1

Summary

EEF1A1-AS1 (EEF1A1 antisense RNA 1, HGNC:40206) is a long non-coding RNA gene on chromosome 6q13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40206
Approved symbol	EEF1A1-AS1
Name	EEF1A1 antisense RNA 1
Location	6q13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229862
Ensembl biotype	lncRNA
Entrez	124901342
RNAcentral	URS00026A1C72 — lncRNA, 3998 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000429386, ENST00000431108, ENST00000819786, ENST00000819787, ENST00000819788, ENST00000819789, ENST00000819790

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429386 — 4 exons

Exon	Start	End
ENSE00001591658	73570287	73570596
ENSE00001612039	73524456	73524546
ENSE00001649289	73525886	73526002
ENSE00001656564	73523841	73523908

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 82.09.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.09	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.83	gold quality
calcaneal tendon	UBERON:0003701	66.06	gold quality
bone marrow cell	CL:0002092	65.52	silver quality
cortical plate	UBERON:0005343	59.51	gold quality
skeletal muscle tissue	UBERON:0001134	58.51	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.68	gold quality
right uterine tube	UBERON:0001302	57.65	gold quality
bone marrow	UBERON:0002371	57.56	gold quality
duodenum	UBERON:0002114	56.08	gold quality
liver	UBERON:0002107	55.98	gold quality
monocyte	CL:0000576	55.73	gold quality
granulocyte	CL:0000094	55.29	gold quality
stromal cell of endometrium	CL:0002255	55.04	silver quality
lymph node	UBERON:0000029	54.88	gold quality
right lobe of liver	UBERON:0001114	54.49	gold quality
blood	UBERON:0000178	53.79	gold quality
fundus of stomach	UBERON:0001160	53.76	gold quality
prefrontal cortex	UBERON:0000451	51.47	gold quality
pancreas	UBERON:0001264	51.41	gold quality
cortex of kidney	UBERON:0001225	51.40	gold quality
body of pancreas	UBERON:0001150	51.19	gold quality
vermiform appendix	UBERON:0001154	50.96	gold quality
metanephros cortex	UBERON:0010533	50.84	gold quality
kidney	UBERON:0002113	50.77	gold quality
tonsil	UBERON:0002372	49.97	gold quality
skin of leg	UBERON:0001511	49.91	gold quality
islet of Langerhans	UBERON:0000006	49.73	gold quality
adult mammalian kidney	UBERON:0000082	49.56	gold quality
placenta	UBERON:0001987	49.36	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.