EFCAB10-AS1

Summary

EFCAB10-AS1 (EFCAB10 antisense RNA 1, HGNC:56350) is a long non-coding RNA gene on chromosome 7q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56350
Approved symbol	EFCAB10-AS1
Name	EFCAB10 antisense RNA 1
Location	7q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000272604
Ensembl biotype	lncRNA
Entrez	127138863
RNAcentral	URS00000F04DE — lncRNA, 2578 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000609827

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609827 — 1 exons

Exon	Start	End
ENSE00003710835	105571083	105573660

Expression profiles

Bgee: expression breadth ubiquitous, 165 present calls, max score 80.98.

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.98	gold quality
cerebellar hemisphere	UBERON:0002245	71.85	gold quality
cerebellar cortex	UBERON:0002129	71.82	gold quality
ganglionic eminence	UBERON:0004023	70.61	gold quality
cerebellum	UBERON:0002037	70.43	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	70.35	gold quality
cortical plate	UBERON:0005343	70.33	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.05	gold quality
ventricular zone	UBERON:0003053	68.83	gold quality
stromal cell of endometrium	CL:0002255	67.28	gold quality
bone marrow cell	CL:0002092	66.18	silver quality
gastrocnemius	UBERON:0001388	64.60	gold quality
colonic epithelium	UBERON:0000397	64.55	silver quality
muscle of leg	UBERON:0001383	64.27	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.11	gold quality
islet of Langerhans	UBERON:0000006	63.17	gold quality
Brodmann (1909) area 9	UBERON:0013540	62.62	gold quality
granulocyte	CL:0000094	61.61	gold quality
pancreatic ductal cell	CL:0002079	61.52	silver quality
smooth muscle tissue	UBERON:0001135	60.74	gold quality
pancreas	UBERON:0001264	60.58	gold quality
anterior cingulate cortex	UBERON:0009835	60.05	gold quality
body of pancreas	UBERON:0001150	59.98	gold quality
oviduct epithelium	UBERON:0004804	59.65	gold quality
right lobe of liver	UBERON:0001114	59.62	gold quality
nucleus accumbens	UBERON:0001882	59.39	gold quality
right coronary artery	UBERON:0001625	59.30	gold quality
left adrenal gland	UBERON:0001234	59.18	gold quality
primary visual cortex	UBERON:0002436	59.16	gold quality
caudate nucleus	UBERON:0001873	59.12	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.