EFCAB2-AS1

Summary

EFCAB2-AS1 (EFCAB2 antisense RNA 1, HGNC:58101) is a long non-coding RNA gene on chromosome 1q44.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58101
Approved symbol	EFCAB2-AS1
Name	EFCAB2 antisense RNA 1
Location	1q44
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-156E8.1
Ensembl gene	ENSG00000272195
Ensembl biotype	lncRNA
Entrez	101928068
RNAcentral	URS000075AA18 — lncRNA, 4834 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000607453, ENST00000810060

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000607453 — 1 exons

Exon	Start	End
ENSE00003702329	244969350	244971088

Expression profiles

Bgee: expression breadth ubiquitous, 160 present calls, max score 91.50.

Top tissues by expression

237 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	91.50	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.05	silver quality
hindlimb stylopod muscle	UBERON:0004252	74.61	gold quality
bone marrow cell	CL:0002092	74.21	gold quality
gastrocnemius	UBERON:0001388	73.45	gold quality
granulocyte	CL:0000094	73.34	gold quality
muscle of leg	UBERON:0001383	73.09	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.32	gold quality
cerebellar hemisphere	UBERON:0002245	69.91	gold quality
cerebellar cortex	UBERON:0002129	69.84	gold quality
sural nerve	UBERON:0015488	69.76	gold quality
apex of heart	UBERON:0002098	68.80	gold quality
cerebellum	UBERON:0002037	68.47	gold quality
left testis	UBERON:0004533	66.88	gold quality
tibial artery	UBERON:0007610	66.69	gold quality
popliteal artery	UBERON:0002250	66.68	gold quality
left ovary	UBERON:0002119	66.49	gold quality
right testis	UBERON:0004534	66.35	gold quality
body of uterus	UBERON:0009853	65.81	gold quality
testis	UBERON:0000473	65.64	gold quality
right atrium auricular region	UBERON:0006631	65.26	gold quality
aorta	UBERON:0000947	65.25	gold quality
cardiac atrium	UBERON:0002081	64.63	gold quality
monocyte	CL:0000576	64.62	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	64.49	gold quality
lower esophagus muscularis layer	UBERON:0035833	64.44	gold quality
lower esophagus	UBERON:0013473	64.36	gold quality
right ovary	UBERON:0002118	64.07	gold quality
left lobe of thyroid gland	UBERON:0001120	63.94	gold quality
right lobe of thyroid gland	UBERON:0001119	63.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.