EGF
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Summary
EGF (epidermal growth factor, HGNC:3229) is a protein-coding gene on chromosome 4q25, encoding Pro-epidermal growth factor (P01133). EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. In precision oncology, EGF EXPRESSION is associated with resistance to Cetuximab in Head And Neck Squamous Cell Carcinoma (CIViC Level D).
This gene encodes a member of the epidermal growth factor superfamily. The encoded preproprotein is proteolytically processed to generate the 53-amino acid epidermal growth factor peptide. This protein acts a potent mitogenic factor that plays an important role in the growth, proliferation and differentiation of numerous cell types. This protein acts by binding with high affinity to the cell surface receptor, epidermal growth factor receptor. Defects in this gene are the cause of hypomagnesemia type 4. Dysregulation of this gene has been associated with the growth and progression of certain cancers. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed.
Source: NCBI Gene 1950 — RefSeq curated summary.
At a glance
- Gene–disease (curated): familial primary hypomagnesemia with normocalciuria and normocalcemia (Supportive, GenCC) — +1 more curated relationship
- GWAS associations: 27
- Clinical variants (ClinVar): 657 total — 1 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 5
- Druggable target: yes
- Precision-oncology evidence (CIViC): 1 curated variant–drug association
- MANE Select transcript:
NM_001963
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3229 |
| Approved symbol | EGF |
| Name | epidermal growth factor |
| Location | 4q25 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000138798 |
| Ensembl biotype | protein_coding |
| OMIM | 131530 |
| Entrez | 1950 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 11 protein_coding, 7 retained_intron, 2 protein_coding_CDS_not_defined
ENST00000265171, ENST00000502579, ENST00000502723, ENST00000503392, ENST00000504633, ENST00000509793, ENST00000509996, ENST00000511228, ENST00000537316, ENST00000540840, ENST00000541061, ENST00000544918, ENST00000652245, ENST00000868529, ENST00000868530, ENST00000868531, ENST00000868532, ENST00000868533, ENST00000934497, ENST00000951655
RefSeq mRNA: 4 — MANE Select: NM_001963
NM_001178130, NM_001178131, NM_001357021, NM_001963
CCDS: CCDS3689, CCDS54794, CCDS54795, CCDS93566
Canonical transcript exons
ENST00000265171 — 24 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000736651 | 109940946 | 109941145 |
| ENSE00000736653 | 109943842 | 109944069 |
| ENSE00000736654 | 109945073 | 109945275 |
| ENSE00000736655 | 109959312 | 109959437 |
| ENSE00000736658 | 109963173 | 109963298 |
| ENSE00000736659 | 109964401 | 109964537 |
| ENSE00000736660 | 109968971 | 109969119 |
| ENSE00000736665 | 109976012 | 109976235 |
| ENSE00000736668 | 109979972 | 109980139 |
| ENSE00000736670 | 109980826 | 109980975 |
| ENSE00000736674 | 109987744 | 109987860 |
| ENSE00000736676 | 109988584 | 109988709 |
| ENSE00001081339 | 110011202 | 110013766 |
| ENSE00001081340 | 109912883 | 109913462 |
| ENSE00003514951 | 110004505 | 110004622 |
| ENSE00003523921 | 109993247 | 109993369 |
| ENSE00003537054 | 109983422 | 109983541 |
| ENSE00003565191 | 109974703 | 109974807 |
| ENSE00003600038 | 109961863 | 109961985 |
| ENSE00003601705 | 109943254 | 109943435 |
| ENSE00003617998 | 109960867 | 109960989 |
| ENSE00003648899 | 109994733 | 109994880 |
| ENSE00003660401 | 109999679 | 109999846 |
| ENSE00003686711 | 110008152 | 110008230 |
Expression profiles
Bgee: expression breadth ubiquitous, 215 present calls, max score 99.43.
FANTOM5 (CAGE): breadth broad, TPM avg 0.6442 / max 45.1507, expressed in 289 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 49251 | 0.4269 | 203 |
| 49252 | 0.1447 | 44 |
| 49253 | 0.0726 | 38 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| renal medulla | UBERON:0000362 | 99.43 | gold quality |
| body of pancreas | UBERON:0001150 | 94.53 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 92.89 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 92.61 | gold quality |
| nephron tubule | UBERON:0001231 | 92.48 | gold quality |
| gastrocnemius | UBERON:0001388 | 91.99 | gold quality |
| biceps brachii | UBERON:0001507 | 91.51 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 91.51 | gold quality |
| muscle of leg | UBERON:0001383 | 90.42 | gold quality |
| muscle organ | UBERON:0001630 | 89.97 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 89.97 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 89.63 | gold quality |
| kidney epithelium | UBERON:0004819 | 89.14 | gold quality |
| kidney | UBERON:0002113 | 89.05 | gold quality |
| deltoid | UBERON:0001476 | 88.89 | gold quality |
| vastus lateralis | UBERON:0001379 | 88.61 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 88.51 | gold quality |
| secondary oocyte | CL:0000655 | 88.03 | gold quality |
| quadriceps femoris | UBERON:0001377 | 87.69 | gold quality |
| oocyte | CL:0000023 | 86.53 | gold quality |
| gluteal muscle | UBERON:0002000 | 86.47 | gold quality |
| pancreas | UBERON:0001264 | 84.87 | gold quality |
| metanephric glomerulus | UBERON:0004736 | 84.83 | gold quality |
| muscle tissue | UBERON:0002385 | 84.34 | gold quality |
| cortex of kidney | UBERON:0001225 | 84.20 | gold quality |
| adult organism | UBERON:0007023 | 84.10 | gold quality |
| renal glomerulus | UBERON:0000074 | 83.69 | gold quality |
| tibialis anterior | UBERON:0001385 | 83.69 | gold quality |
| metanephros cortex | UBERON:0010533 | 82.43 | gold quality |
| monocyte | CL:0000576 | 82.32 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-131882 | yes | 8827.30 |
| E-CURD-119 | yes | 6702.88 |
| E-ANND-3 | yes | 17.66 |
| E-CURD-135 | no | 1692.03 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
4 targets.
| Target | Regulation |
|---|---|
| HBA1 | Activation |
| HBB | Activation |
| MED1 | Activation |
| STAT1 | Unknown |
Upstream regulators (CollecTRI, top): AP1, AR, CEBPB, CEBPD, CEBPE, CTCF, E2F1, EGR1, ELK3, EPAS1, ESR1, ETS2, FOS, FOSL1, FOXC1, GCFC2, GLI3, HIF1A, HNF1B, HNF4A, HTATIP2, IRF6, JUN, JUNB, JUND, KLF5, MYB, MYC, NCOA2, NFATC4, NFKB1, NFKB, NR0B1, NR2E1, NR4A1, NRG1, PAX6, POU1F1, RELA, SMAD1
miRNA regulators (miRDB)
61 targeting EGF, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-4645-5P | 99.98 | 65.81 | 1284 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-548AT-5P | 99.96 | 70.83 | 2666 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-539-5P | 99.93 | 70.30 | 2855 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-3529-3P | 99.90 | 73.55 | 3045 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-548D-3P | 99.87 | 70.67 | 4362 |
| HSA-MIR-548BB-3P | 99.86 | 70.58 | 4354 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-548AC | 99.84 | 70.77 | 4351 |
| HSA-MIR-548H-3P | 99.84 | 70.80 | 4349 |
| HSA-MIR-548Z | 99.84 | 70.80 | 4349 |
| HSA-MIR-3618 | 99.69 | 68.57 | 1012 |
| HSA-MIR-1283 | 99.69 | 72.42 | 3009 |
| HSA-MIR-7154-5P | 99.69 | 70.52 | 1900 |
| HSA-MIR-5700 | 99.64 | 69.88 | 2280 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-802 | 99.61 | 67.70 | 1254 |
| HSA-MIR-142-5P | 99.48 | 70.92 | 2416 |
| HSA-MIR-5590-3P | 99.48 | 70.91 | 2429 |
Literature-anchored findings (GeneRIF, showing 40)
- The data presented here demonstrate that, in contrast to activation by the cytokine, growth hormone (GH), the activation of STAT5b by the growth factor, epidermal growth factor (EGF), requires overexpression of the EGF receptor (EGFR). (PMID:11751923)
- ERK negatively regulates the epidermal growth factor-mediated interaction of Gab1 and the phosphatidylinositol 3-kinase (PMID:11896055)
- assess the levels of EGF during pregnancy and to determine whether or not low concentrations are associated with fetal untrauterine growth retardation (PMID:11903419)
- Epidermal growth factor contains both positive and negative determinants for interaction with ErbB-2/ErbB-3 heterodimers (PMID:11914075)
- connecting segment between EGF-like domains in factor IX contributes to stimulation by factor VIIIa and its A2 domain (PMID:11925427)
- Detecting protein-phospholipid interactions. Epidermal growth factor-induced activation of phospholipase D1b in situ (PMID:11950840)
- Epidermal growth factor-mediated activation of the ETS domain transcription factor Elk-1 requires nuclear calcium (PMID:11971908)
- blocking of EGF-induced activation of Akt by inhibiting Src family kinases (PMID:11994282)
- expression and role of EGF in fat cells and insulin resistance in humans (PMID:12138086)
- effect of epidermal growth factor on vascular endothelial growth factor secretion by endometrial stromal cells (PMID:12141529)
- Differential effects of FGF4, EGF and TGFB1 on functional development of stromal layers (progenitor cell-outputs) in acute myeloid leukemia (PMID:12163055)
- These results suggest that epidermal growth factor treatment increased p11 bound to cPLA(2) may lead to the late suppression of AA release induced by EGF. (PMID:12163506)
- EGF protein levels were decreased in the prefrontal cortex and striatum of schizophrenic patients (PMID:12192610)
- In repair model, both EGF and TGFalpha stimulated the wound closure strongly by increased cell migration. (PMID:12202942)
- EGF stimulates Ca(2+) influx via a mechanism distinct from capacitative Ca(2+) influx induced by carbachol and thapsigargin (PMID:12368284)
- Human cytomegalovirus infection inhibits epidermal growth factor (EGF) signalling by targeting EGF receptors (PMID:12388817)
- binds to a receptor on Trypanosoma cruzi amastigotes inducing signal transduction events and cell proliferation (PMID:12425525)
- Levels of this factor are lowered in cryptorchism. (PMID:12508124)
- Fatty acid synthase and sterol regulatory element binding protein-1c mRNAs are coordinately modulated by changes in EGF signalling in breast cancer cells. (PMID:12531699)
- EGF enhances beta-adrenergic responsiveness by upregulating beta(2)-adrenergic receptor at transcriptional level. Stimulatory effect of EGF on beta(2)-adrenergic receptor signaling mediated by MAPK pathway and independent of PKC activation. (PMID:12540376)
- epidermal growth factor-induced connexin 43 gap junction communication is regulated by big mitogen-activated protein kinase1/ERK5 (PMID:12637502)
- Epidermal growth factor and ionizing radiation up-regulate the DNA repair genes XRCC1 and ERCC1 in DU145 and LNCaP prostate carcinoma through MAPK signaling. (PMID:12643788)
- The expression of EGF in hepatocellular carcinoma, HCC underlies the overexpression of VEGF in HCC. (PMID:12667326)
- EGF trafficking is facilitated by cortactin linking receptor endocytosis to actin polymerization (PMID:12672817)
- A431 squamous cell carcinoma cells have an increased expression of EGF receptor. There is no difference in expression of EGF receptor or in the EGF-induced phospohorylation in A431 cells and clonal variants. (PMID:12722480)
- EGF protects against oxidative stress disruption of intestinal barrier by stabilizing F-Actin, largely through the activation of PLC-gamma and downregulation of iNOS pathway. (PMID:12788694)
- EGF can protect tumor cells from TNF-alpha-induced apoptosis through activation of PKC-delta (PMID:12795334)
- EGF decreases the antiproliferative effect of TGFbeta in primary human ovarian cancer cells (PMID:12879019)
- epidermal growth factor induces keratin 16 expression through cooperation of transcription factors Sp1 and c-Jun (PMID:12954631)
- epidermal growth factor internalization does not require either clathrin or AP-2 (PMID:12960147)
- Biological dressing effect of cultured epidermal sheets(CESs) is mediated by EGF family, TGF-beta, and VEGF. Ability of EGF to enhance growth factor production in CESs. (PMID:14507446)
- EGF and angiotensin II activation of phospholipase Cgamma through src is mediated by GIT1 (PMID:14523024)
- There was decreased EGF mRNA expression in the stenotic tissue after clinical ureteropelvic junction obstruction. Alteration of EGF expression may be involved in the pathogenesis of congenital hydronephrosis. (PMID:14614718)
- Soluble protein components of the cytosol from A431 cells are shown to dramatically enhance binding of the EGFR to F-actin in a saturable, concentration-dependent fashion. (PMID:14651960)
- EGF signaling through MAPK increases TIF2/GRIP1 coactivation of androgen receptor transactivation in recurrent prostate cancer (PMID:14662770)
- Etk activation is essential for transducing the EGF-induced apoptotic signaling in breast cancer cells. (PMID:14676838)
- Fibroblast proliferation, differentiation into myofibroblasts, & increased collagen synthesis are regulated via a CTGF-dependent pathway in concert with either EGF or IGF-2. (PMID:15003992)
- EGF-mediated induction of fibronectin expression occurs at the post-transcriptional level and involves PKCdelta signaling pathway. (PMID:15175028)
- epidermal growth factor-induced chemotaxis requires sphingosine-1-phosphate phosphatase 1 (PMID:15180992)
- Supplementation of enteral feeds with EGF reduces incidence of intestinal inflammation and necrotizing enterocolitis. Review. (PMID:15183666)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | egf | ENSDARG00000052739 |
| mus_musculus | Egf | ENSMUSG00000028017 |
| rattus_norvegicus | Egf | ENSRNOG00000053979 |
| drosophila_melanogaster | Lrp4 | FBGN0030706 |
| caenorhabditis_elegans | WBGENE00004374 |
Paralogs (14): LRP6 (ENSG00000070018), LRP2 (ENSG00000081479), NID2 (ENSG00000087303), NID1 (ENSG00000116962), LRP1 (ENSG00000123384), LDLR (ENSG00000130164), LRP3 (ENSG00000130881), LRP4 (ENSG00000134569), LRP12 (ENSG00000147650), VLDLR (ENSG00000147852), LRP8 (ENSG00000157193), LRP5 (ENSG00000162337), LRP1B (ENSG00000168702), LRP10 (ENSG00000197324)
Protein
Protein identifiers
Pro-epidermal growth factor — P01133 (reviewed: P01133)
All UniProt accessions (2): P01133, A0A494C018
UniProt curated annotations — full annotation on UniProt →
Function. EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6. Can induce neurite outgrowth in motoneurons of the pond snail Lymnaea stagnalis in vitro.
Subunit / interactions. Interacts with EGFR and promotes EGFR dimerization. Interacts with RHBDF2. Interacts with RHBDF1; may retain EGF in the endoplasmic reticulum and regulates its degradation through the endoplasmic reticulum-associated degradation (ERAD).
Subcellular location. Membrane.
Tissue specificity. Expressed in kidney, salivary gland, cerebrum and prostate.
Post-translational modifications. O-glycosylated with core 1-like and core 2-like glycans. It is uncertain if Ser-954 or Thr-955 is O-glycosylated. The modification here shows glycan heterogeneity: HexHexNAc (major) and Hex2HexNAc2 (minor).
Disease relevance. Hypomagnesemia 4 (HOMG4) [MIM:611718] A disorder characterized by massive renal hypomagnesemia and normal levels of serum calcium and calcium excretion. Clinical features include seizures, mild-to moderate psychomotor retardation, and brisk tendon reflexes. The disease is caused by variants affecting the gene represented in this entry.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P01133-1 | 1 | yes |
| P01133-2 | 2 | |
| P01133-3 | 3 |
RefSeq proteins (4): NP_001171601, NP_001171602, NP_001343950, NP_001954* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000033 | LDLR_classB_rpt | Repeat |
| IPR000152 | EGF-type_Asp/Asn_hydroxyl_site | PTM |
| IPR000742 | EGF | Domain |
| IPR001881 | EGF-like_Ca-bd_dom | Domain |
| IPR009030 | Growth_fac_rcpt_cys_sf | Homologous_superfamily |
| IPR011042 | 6-blade_b-propeller_TolB-like | Homologous_superfamily |
| IPR016317 | Pro-epidermal_GF | Family |
| IPR018097 | EGF_Ca-bd_CS | Conserved_site |
| IPR049883 | NOTCH1_EGF-like | Domain |
| IPR050778 |
Pfam: PF00008, PF00058, PF07645, PF14670
UniProt features (91 total): disulfide bond 27, sequence variant 15, domain 9, repeat 9, glycosylation site 9, strand 5, region of interest 4, chain 2, topological domain 2, splice variant 2, turn 2, signal peptide 1, compositionally biased region 1, transmembrane region 1, sequence conflict 1, helix 1
Structure
Experimental structures (PDB)
13 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1NQL | X-RAY DIFFRACTION | 2.8 |
| 1JL9 | X-RAY DIFFRACTION | 3 |
| 7SYD | ELECTRON MICROSCOPY | 3.1 |
| 1IVO | X-RAY DIFFRACTION | 3.3 |
| 7SYE | ELECTRON MICROSCOPY | 3.3 |
| 7SZ0 | ELECTRON MICROSCOPY | 3.3 |
| 3NJP | X-RAY DIFFRACTION | 3.3 |
| 8HGO | ELECTRON MICROSCOPY | 3.31 |
| 7SZ1 | ELECTRON MICROSCOPY | 3.4 |
| 8HGS | ELECTRON MICROSCOPY | 3.81 |
| 7OM4 | X-RAY DIFFRACTION | 6.05 |
| 1P9J | SOLUTION NMR | |
| 2KV4 | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P01133-F1 | 70.66 | 0.21 |
Antibody-complex structures (SAbDab): 1 — 7OM4
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (27): 318–330, 325–339, 341–354, 360–371, 367–380, 382–395, 401–412, 408–421, 423–436, 439–451, 447–461, 463–476, 745–756, 752–765, 767–780, 835–846, 840–855, 857–868, 874–888, 881–897 …
Glycosylation sites (9): 38, 104, 117, 148, 324, 404, 596, 815, 926
Function
Pathways and Gene Ontology
Reactome pathways
36 pathways
| ID | Pathway |
|---|---|
| R-HSA-114608 | Platelet degranulation |
| R-HSA-1227986 | Signaling by ERBB2 |
| R-HSA-1236382 | Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants |
| R-HSA-1236394 | Signaling by ERBB4 |
| R-HSA-1250196 | SHC1 events in ERBB2 signaling |
| R-HSA-1251932 | PLCG1 events in ERBB2 signaling |
| R-HSA-1257604 | PIP3 activates AKT signaling |
| R-HSA-177929 | Signaling by EGFR |
| R-HSA-179812 | GRB2 events in EGFR signaling |
| R-HSA-180292 | GAB1 signalosome |
| R-HSA-180336 | SHC1 events in EGFR signaling |
| R-HSA-182971 | EGFR downregulation |
| R-HSA-1963640 | GRB2 events in ERBB2 signaling |
| R-HSA-1963642 | PI3K events in ERBB2 signaling |
| R-HSA-212718 | EGFR interacts with phospholipase C-gamma |
| R-HSA-2219530 | Constitutive Signaling by Aberrant PI3K in Cancer |
| R-HSA-5637810 | Constitutive Signaling by EGFRvIII |
| R-HSA-5638303 | Inhibition of Signaling by Overexpressed EGFR |
| R-HSA-5673001 | RAF/MAP kinase cascade |
| R-HSA-6785631 | ERBB2 Regulates Cell Motility |
| R-HSA-6811558 | PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling |
| R-HSA-8847993 | ERBB2 Activates PTK6 Signaling |
| R-HSA-8856825 | Cargo recognition for clathrin-mediated endocytosis |
| R-HSA-8856828 | Clathrin-mediated endocytosis |
| R-HSA-8863795 | Downregulation of ERBB2 signaling |
| R-HSA-9009391 | Extra-nuclear estrogen signaling |
| R-HSA-9013507 | NOTCH3 Activation and Transmission of Signal to the Nucleus |
| R-HSA-9634638 | Estrogen-dependent nuclear events downstream of ESR-membrane signaling |
| R-HSA-9664565 | Signaling by ERBB2 KD Mutants |
| R-HSA-9665348 | Signaling by ERBB2 ECD mutants |
MSigDB gene sets: 512 (showing top):
PID_SHP2_PATHWAY, GSE45365_NK_CELL_VS_CD8A_DC_MCMV_INFECTION_UP, GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, chr4q25, GOBP_POSITIVE_REGULATION_OF_MITOTIC_NUCLEAR_DIVISION, GOBP_HINDBRAIN_DEVELOPMENT, REACTOME_SIGNALING_BY_NOTCH, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_POLYSACCHARIDE_BIOSYNTHETIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, REACTOME_GAB1_SIGNALOSOME, PID_TELOMERASE_PATHWAY, GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_REGULATION_OF_NUCLEAR_DIVISION, GOCC_VACUOLAR_MEMBRANE
GO Biological Process (42): angiogenesis (GO:0001525), positive regulation of endothelial cell proliferation (GO:0001938), positive regulation of receptor internalization (GO:0002092), ubiquitin-dependent protein catabolic process (GO:0006511), epidermal growth factor receptor signaling pathway (GO:0007173), positive regulation of cell population proliferation (GO:0008284), positive regulation of endothelial cell migration (GO:0010595), positive regulation of gene expression (GO:0010628), positive regulation of peptidyl-threonine phosphorylation (GO:0010800), protein ubiquitination (GO:0016567), cerebellar granule cell precursor proliferation (GO:0021930), positive regulation of cerebellar granule cell precursor proliferation (GO:0021940), positive regulation of cell migration (GO:0030335), ERBB2-EGFR signaling pathway (GO:0038134), negative regulation of epidermal growth factor receptor signaling pathway (GO:0042059), positive regulation of phosphorylation (GO:0042327), positive regulation of DNA binding (GO:0043388), positive regulation of MAPK cascade (GO:0043410), positive regulation of mitotic nuclear division (GO:0045840), positive regulation of DNA-templated transcription (GO:0045893), regulation of receptor signaling pathway via JAK-STAT (GO:0046425), branching morphogenesis of an epithelial tube (GO:0048754), epithelial cell proliferation (GO:0050673), negative regulation of secretion (GO:0051048), positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0051897), mammary gland alveolus development (GO:0060749), ubiquitin-dependent endocytosis (GO:0070086), ERK1 and ERK2 cascade (GO:0070371), positive regulation of canonical Wnt signaling pathway (GO:0090263), regulation of calcium ion import (GO:0090279), negative regulation of cholesterol efflux (GO:0090370), positive regulation of hyaluronan biosynthetic process (GO:1900127), positive regulation of protein localization to early endosome (GO:1902966), positive regulation of epithelial tube formation (GO:1905278), regulation of protein localization to cell surface (GO:2000008), positive regulation of ubiquitin-dependent protein catabolic process (GO:2000060), cell population proliferation (GO:0008283), positive regulation of macromolecule metabolic process (GO:0010604), system development (GO:0048731), positive regulation of epithelial cell proliferation (GO:0050679)
GO Molecular Function (7): guanyl-nucleotide exchange factor activity (GO:0005085), epidermal growth factor receptor binding (GO:0005154), calcium ion binding (GO:0005509), growth factor activity (GO:0008083), transmembrane receptor protein tyrosine kinase activator activity (GO:0030297), receptor ligand activity (GO:0048018), protein binding (GO:0005515)
GO Cellular Component (8): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), lysosomal membrane (GO:0005765), plasma membrane (GO:0005886), clathrin-coated endocytic vesicle membrane (GO:0030669), platelet alpha granule lumen (GO:0031093), extracellular exosome (GO:0070062), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-10 pathways:
| Category | Pathways |
|---|---|
| Signaling by ERBB2 | 5 |
| Signaling by EGFR | 5 |
| Signaling by Receptor Tyrosine Kinases | 3 |
| Response to elevated platelet cytosolic Ca2+ | 1 |
| Signaling by Ligand-Responsive EGFR Variants in Cancer | 1 |
| Intracellular signaling by second messengers | 1 |
| PI3K/AKT Signaling in Cancer | 1 |
| Signaling by EGFRvIII in Cancer | 1 |
| Signaling by Overexpressed Wild-Type EGFR in Cancer | 1 |
| MAPK1/MAPK3 signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| epidermal growth factor receptor signaling pathway | 2 |
| signaling receptor activator activity | 2 |
| cellular anatomical structure | 2 |
| blood vessel morphogenesis | 1 |
| anatomical structure formation involved in morphogenesis | 1 |
| endothelial cell proliferation | 1 |
| regulation of endothelial cell proliferation | 1 |
| positive regulation of epithelial cell proliferation | 1 |
| regulation of receptor internalization | 1 |
| receptor internalization | 1 |
| positive regulation of receptor-mediated endocytosis | 1 |
| protein ubiquitination | 1 |
| modification-dependent protein catabolic process | 1 |
| ERBB signaling pathway | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| regulation of endothelial cell migration | 1 |
| positive regulation of cell migration | 1 |
| endothelial cell migration | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| positive regulation of protein phosphorylation | 1 |
| regulation of peptidyl-threonine phosphorylation | 1 |
| peptidyl-threonine phosphorylation | 1 |
| protein modification by small protein conjugation | 1 |
| cell proliferation in external granule layer | 1 |
| cerebellar granule cell precursor proliferation | 1 |
| regulation of cerebellar granule cell precursor proliferation | 1 |
| positive regulation of neural precursor cell proliferation | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
| ERBB2 signaling pathway | 1 |
| regulation of epidermal growth factor receptor signaling pathway | 1 |
| negative regulation of ERBB signaling pathway | 1 |
| phosphorylation | 1 |
| regulation of phosphorylation | 1 |
| positive regulation of phosphate metabolic process | 1 |
Protein interactions and networks
STRING
8188 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| EGF | EGFR | P00533 | 999 |
| EGF | ERBB2 | P04626 | 998 |
| EGF | ERBB3 | P21860 | 998 |
| EGF | AREG | P15514 | 997 |
| EGF | ERBB4 | Q15303 | 997 |
| EGF | FGF7 | P21781 | 993 |
| EGF | GRB2 | P29354 | 993 |
| EGF | NTRK1 | P04629 | 991 |
| EGF | FGF8 | P55075 | 991 |
| EGF | FGF10 | O15520 | 990 |
| EGF | FGF4 | P08620 | 989 |
| EGF | FGF22 | Q9HCT0 | 989 |
| EGF | FGF6 | P10767 | 989 |
| EGF | HBEGF | Q99075 | 989 |
| EGF | FGF18 | O76093 | 989 |
| EGF | FGF3 | P11487 | 989 |
| EGF | FGF5 | P12034 | 989 |
IntAct
42 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| EGF | EGFR | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| EGFR | EGF | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| EGFR | EGF | psi-mi:“MI:0915”(physical association) | 0.970 |
| EGF | EGFR | psi-mi:“MI:0915”(physical association) | 0.970 |
| EGFR | EGF | psi-mi:“MI:2364”(proximity) | 0.970 |
| EGF | MGST1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| APP | EGF | psi-mi:“MI:0407”(direct interaction) | 0.440 |
BioGRID (37): LMNA (Affinity Capture-Western), EGF (Co-localization), EGF (Co-localization), EGF (Co-localization), EGF (Affinity Capture-Luminescence), EGF (Co-crystal Structure), EGF (Co-crystal Structure), EGF (Reconstituted Complex), EGF (Reconstituted Complex), EGF (Reconstituted Complex), EGF (Co-localization), EGF (Co-localization), EGF (Affinity Capture-Western), EGF (Reconstituted Complex), EGF (Affinity Capture-Western)
ESM2 similar proteins: A0A2K5V015, A1YIY0, A8MUZ8, A8MWA4, B8JI71, O08569, P01133, P0DJ43, P14370, P14585, P17630, P19070, P48357, P82279, P97435, Q07444, Q0D2K5, Q28066, Q28660, Q29RU2, Q4KUS1, Q5G872, Q5R6R1, Q5RCW9, Q5T1H1, Q5UKY4, Q5Z5Q3, Q60736, Q63515, Q63722, Q6DFV8, Q6GMZ9, Q6V0K7, Q6ZN79, Q7TSY4, Q811Q4, Q8N2E2, Q8VHS2, Q90Y54, Q95MI4
Diamond homologs: A2AJ76, A2AR95, A2ARV4, A2VEC9, A4IHY6, A4QPB2, B3EWZ6, B4IXJ2, C0HL13, G3V928, O43897, O57460, O88307, P01130, P01131, P01133, P07225, P0DSP1, P10493, P13497, P14543, P15306, P20063, P27590, P35950, P35951, P35952, P53813, P86091, P98063, P98118, P98157, P98158, P98160, P98164, P98167, Q00918, Q00968, Q04833, Q07954
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| SLC34A2 | down-regulates | EGF | |
| EGF | up-regulates | ERBB2 | binding |
| EGF | “up-regulates activity” | EGFR | binding |
| EGF | up-regulates | EGFR | binding |
| ADAM10 | “up-regulates activity” | EGF | cleavage |
| EGF | “up-regulates quantity by expression” | HBB | “transcriptional regulation” |
| EGF | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
657 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 1 |
| Uncertain significance | 332 |
| Likely benign | 156 |
| Benign | 117 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 16614 | NM_001963.6(EGF):c.3209C>T (p.Pro1070Leu) | Pathogenic |
| 3065614 | NM_001963.6(EGF):c.1189+1G>A | Likely pathogenic |
SpliceAI
4540 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:109943366:GAAA:G | donor_gain | 1.0000 |
| 4:109944000:G:GT | donor_gain | 1.0000 |
| 4:109945100:T:A | acceptor_gain | 1.0000 |
| 4:109960990:G:GG | donor_gain | 1.0000 |
| 4:109961859:TTAG:T | acceptor_loss | 1.0000 |
| 4:109961861:A:AG | acceptor_gain | 1.0000 |
| 4:109961861:A:G | acceptor_loss | 1.0000 |
| 4:109961862:G:C | acceptor_loss | 1.0000 |
| 4:109961862:G:GA | acceptor_gain | 1.0000 |
| 4:109961862:GA:G | acceptor_gain | 1.0000 |
| 4:109961862:GAA:G | acceptor_gain | 1.0000 |
| 4:109961862:GAAC:G | acceptor_gain | 1.0000 |
| 4:109961862:GAACT:G | acceptor_gain | 1.0000 |
| 4:109961880:C:CA | acceptor_gain | 1.0000 |
| 4:109961983:GCG:G | donor_gain | 1.0000 |
| 4:109961984:CGGT:C | donor_loss | 1.0000 |
| 4:109961985:GGTG:G | donor_loss | 1.0000 |
| 4:109961986:G:GA | donor_loss | 1.0000 |
| 4:109961986:G:GG | donor_gain | 1.0000 |
| 4:109961987:TGAG:T | donor_loss | 1.0000 |
| 4:109961988:GAGT:G | donor_loss | 1.0000 |
| 4:109963169:GTA:G | acceptor_loss | 1.0000 |
| 4:109963171:A:AG | acceptor_gain | 1.0000 |
| 4:109963172:G:A | acceptor_loss | 1.0000 |
| 4:109963172:G:GG | acceptor_gain | 1.0000 |
| 4:109963172:GGTT:G | acceptor_gain | 1.0000 |
| 4:109963295:TCAGG:T | donor_loss | 1.0000 |
| 4:109963296:CAGGT:C | donor_loss | 1.0000 |
| 4:109963297:AGGTT:A | donor_loss | 1.0000 |
| 4:109963298:GGT:G | donor_loss | 1.0000 |
AlphaMissense
7943 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:109960911:T:A | C371S | 0.989 |
| 4:109960912:G:C | C371S | 0.989 |
| 4:109999707:T:A | C1012S | 0.988 |
| 4:109999708:G:C | C1012S | 0.988 |
| 4:109960983:T:A | C395S | 0.985 |
| 4:109960984:G:C | C395S | 0.985 |
| 4:109960878:T:A | C360S | 0.983 |
| 4:109960879:G:C | C360S | 0.983 |
| 4:109960899:T:A | C367S | 0.982 |
| 4:109960900:G:C | C367S | 0.982 |
| 4:109980010:T:A | W698R | 0.982 |
| 4:109980010:T:C | W698R | 0.982 |
| 4:109960956:T:C | F386L | 0.981 |
| 4:109960958:T:A | F386L | 0.981 |
| 4:109960958:T:G | F386L | 0.981 |
| 4:109979995:T:C | F693L | 0.981 |
| 4:109979997:T:A | F693L | 0.981 |
| 4:109979997:T:G | F693L | 0.981 |
| 4:109960940:C:G | C380W | 0.980 |
| 4:109976154:T:A | W658R | 0.980 |
| 4:109976154:T:C | W658R | 0.980 |
| 4:109976187:G:C | A669P | 0.979 |
| 4:109960944:T:C | C382R | 0.978 |
| 4:109976151:T:G | Y657D | 0.978 |
| 4:109960938:T:A | C380S | 0.976 |
| 4:109960939:G:C | C380S | 0.976 |
| 4:109994825:T:A | C984S | 0.975 |
| 4:109994826:G:C | C984S | 0.975 |
| 4:109994876:T:A | C1001S | 0.975 |
| 4:109994877:G:C | C1001S | 0.975 |
dbSNP variants (sampled 300 via entrez): RS1000012351 (4:110009393 G>A), RS1000060525 (4:109914978 G>A,T), RS1000083582 (4:109970686 C>A,T), RS1000128057 (4:110009687 A>G), RS1000132511 (4:109971136 TCAA>T), RS1000143949 (4:109997170 G>A,T), RS1000177080 (4:109997460 T>A,G), RS1000181928 (4:109911535 C>T), RS1000190490 (4:109920687 T>A), RS10002835 (4:109927648 C>G,T), RS10002971 (4:109974894 A>C), RS1000322480 (4:109945642 G>A,T), RS1000328296 (4:109990392 A>T), RS1000363853 (4:109934212 A>G), RS1000480879 (4:109995171 T>G)
Disease associations
OMIM: gene MIM:131530 | disease phenotypes: MIM:611718
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| familial primary hypomagnesemia with normocalciuria and normocalcemia | Supportive | Autosomal dominant |
| renal hypomagnesemia 4 | Limited | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| renal hypomagnesemia 4 | Limited | AR |
Mondo (4): renal hypomagnesemia 4 (MONDO:0012717), cholangiocarcinoma (MONDO:0019087), hereditary renal cell carcinoma (MONDO:0003008), familial primary hypomagnesemia with normocalciuria and normocalcemia (MONDO:0018101)
Orphanet (2): OBSOLETE: Familial primary hypomagnesemia with normocalciuria and normocalcemia (Orphanet:34527), Cholangiocarcinoma (Orphanet:70567)
HPO phenotypes
5 total (5 of 5 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001250 | Seizure |
| HP:0001263 | Global developmental delay |
| HP:0002342 | Moderate intellectual disability |
| HP:0002917 | Hypomagnesemia |
GWAS associations
27 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000519_8 | Hair morphology | 9.000000e-06 |
| GCST004603_270 | Platelet count | 3.000000e-16 |
| GCST004607_224 | Plateletcrit | 8.000000e-19 |
| GCST004619_33 | Reticulocyte fraction of red cells | 5.000000e-10 |
| GCST004622_166 | Reticulocyte count | 3.000000e-10 |
| GCST005987_34 | Albumin-globulin ratio | 2.000000e-11 |
| GCST005990_47 | Non-albumin protein levels | 2.000000e-10 |
| GCST005991_81 | Platelet count | 2.000000e-28 |
| GCST006011_25 | Mean corpuscular volume | 7.000000e-10 |
| GCST006585_1646 | Blood protein levels | 5.000000e-62 |
| GCST008159_73 | Waist-to-hip ratio adjusted for BMI | 1.000000e-06 |
| GCST012032_2 | Platelet count | 3.000000e-09 |
| GCST90002385_256 | High light scatter reticulocyte count | 2.000000e-13 |
| GCST90002386_3 | High light scatter reticulocyte percentage of red cells | 2.000000e-12 |
| GCST90002388_352 | Lymphocyte count | 6.000000e-20 |
| GCST90002391_22 | Mean corpuscular hemoglobin concentration | 3.000000e-17 |
| GCST90002393_136 | Monocyte count | 2.000000e-18 |
| GCST90002394_63 | Monocyte percentage of white cells | 3.000000e-09 |
| GCST90002397_20 | Mean spheric corpuscular volume | 9.000000e-33 |
| GCST90002399_382 | Neutrophil percentage of white cells | 1.000000e-11 |
| GCST90002400_437 | Plateletcrit | 2.000000e-36 |
| GCST90002400_438 | Plateletcrit | 4.000000e-10 |
| GCST90002401_150 | Platelet distribution width | 1.000000e-18 |
| GCST90002402_743 | Platelet count | 3.000000e-27 |
| GCST90002405_41 | Reticulocyte count | 3.000000e-18 |
| GCST90002406_92 | Reticulocyte fraction of red cells | 4.000000e-17 |
| GCST90016667_28 | Spleen volume | 4.000000e-14 |
EFO canonical traits (12, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005038 | hair morphology |
| EFO:0004309 | platelet count |
| EFO:0007985 | platelet crit |
| EFO:0007986 | reticulocyte count |
| EFO:0005128 | albumin:globulin ratio measurement |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
| EFO:0004587 | lymphocyte count |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0005091 | monocyte count |
| EFO:0007989 | monocyte percentage of leukocytes |
| EFO:0007990 | neutrophil percentage of leukocytes |
| EFO:0007984 | platelet component distribution width |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018281 | Cholangiocarcinoma | C04.557.470.200.025.450 |
| C536851 | Familial renal cell carcinoma (supp.) | |
| C567127 | Hypomagnesemia 4, Renal (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5734 (SINGLE PROTEIN)
Clinical evidence (CIViC)
Drug × variant × indication: 1 predictive associations from 1 curated evidence items.
| Variant | Therapy | Indication | Effect | Level | CIViC |
|---|---|---|---|---|---|
| EGF EXPRESSION | Cetuximab | Head And Neck Squamous Cell Carcinoma | Resistance | CIViC D | EID826 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs4444903 | Efficacy | 3 | cetuximab | Colorectal Neoplasms;Rectal Neoplasms |
PharmGKB variants
8 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs929446 | EGF | 0.00 | 0 | ||
| rs2074390 | EGF | 0.00 | 0 | ||
| rs4444903 | EGF | 3 | 3.25 | 1 | cetuximab |
| rs4698803 | EGF | 0.00 | 0 | ||
| rs6533485 | EGF | 0.00 | 0 | ||
| rs6850557 | EGF | 0.00 | 0 | ||
| rs11568972 | EGF | 0.00 | 0 | ||
| rs11568993 | EGF | 0.00 | 0 |
CTD chemical–gene interactions
260 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| U 0126 | decreases reaction, increases expression, increases secretion, decreases response to substance, increases reaction (+2 more) | 15 |
| RTKI cpd | decreases secretion, increases secretion, increases reaction, affects localization, decreases reaction (+5 more) | 14 |
| 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one | decreases reaction, increases expression, increases secretion, decreases activity, decreases secretion (+3 more) | 13 |
| 2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one | decreases reaction, increases expression, increases activity, increases secretion, increases reaction (+4 more) | 12 |
| Gefitinib | increases abundance, affects localization, decreases reaction, affects binding, increases reaction (+3 more) | 10 |
| Quercetin | increases secretion, decreases expression, decreases phosphorylation, decreases reaction, increases response to substance (+2 more) | 8 |
| 4-((3-bromophenyl)amino)-6,7-dimethoxyquinazoline | affects localization, decreases reaction, increases activity, increases expression, increases phosphorylation | 7 |
| Estradiol | increases reaction, increases phosphorylation, affects activity, affects cotreatment, decreases reaction (+2 more) | 7 |
| Valproic Acid | affects cotreatment, decreases expression, decreases reaction, increases activity, increases reaction (+2 more) | 6 |
| Erlotinib Hydrochloride | increases phosphorylation, affects binding, decreases reaction, decreases response to substance, increases reaction (+1 more) | 5 |
| Resveratrol | increases reaction, decreases phosphorylation, increases phosphorylation, affects reaction, decreases activity (+5 more) | 5 |
| Luteolin | decreases phosphorylation, decreases reaction, increases expression, increases reaction, increases phosphorylation (+2 more) | 5 |
| sodium arsenite | decreases reaction, increases phosphorylation, increases reaction, decreases expression, increases expression | 4 |
| epigallocatechin gallate | affects binding, decreases reaction, increases reaction, increases activity, increases expression (+2 more) | 4 |
| pyrazolanthrone | decreases response to substance, increases reaction, decreases reaction, increases expression, increases secretion | 4 |
| Acetylcysteine | increases expression, affects cotreatment, increases secretion, decreases expression, decreases reaction | 4 |
| Curcumin | increases expression, increases phosphorylation, increases secretion, decreases activity, decreases reaction | 4 |
| trichostatin A | affects cotreatment, decreases expression | 3 |
| 2,4,5,2’,4’,5’-hexachlorobiphenyl | decreases expression, affects cotreatment, affects binding, decreases reaction, increases phosphorylation | 3 |
| AG 1879 | affects cotreatment, decreases reaction, increases expression, increases phosphorylation | 3 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | decreases expression, increases expression, decreases reaction, decreases response to substance, increases reaction (+1 more) | 3 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | decreases reaction, increases phosphorylation | 3 |
| Fulvestrant | affects activity, affects cotreatment, decreases reaction, increases expression | 3 |
| Lipopolysaccharides | decreases reaction, increases secretion, affects cotreatment, affects response to substance, increases expression | 3 |
| Tamoxifen | decreases response to substance, increases activity, increases response to substance, decreases reaction, affects activity (+2 more) | 3 |
| Tetrachlorodibenzodioxin | affects binding, decreases reaction, increases expression | 3 |
| Tretinoin | decreases activity, affects cotreatment, increases expression | 3 |
| nonachlor | affects binding, affects cotreatment, decreases reaction, increases phosphorylation | 2 |
| triphenyl phosphate | affects expression, increases expression | 2 |
| bisphenol A | increases secretion, decreases expression, increases expression | 2 |
ChEMBL screening assays
5 unique, capped per target: 5 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1031405 | Binding | Inhibition of human EGF at 3 uM | Discovery of substituted 4-(pyrazol-4-yl)-phenylbenzodioxane-2-carboxamides as potent and highly selective Rho kinase (ROCK-II) inhibitors. — J Med Chem |
Cellosaurus cell lines
7 cell lines: 5 cancer cell line, 2 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A9DY | A31-IS11 EGF-2 | Spontaneously immortalized cell line | Sex unspecified |
| CVCL_A9DZ | LA9-IS11 EGF-2 | Spontaneously immortalized cell line | Male |
| CVCL_B1QS | Abcam HeLa EGF KO | Cancer cell line | Female |
| CVCL_B8F2 | Abcam HCT 116 EGF KO | Cancer cell line | Male |
| CVCL_B8V4 | Abcam MCF-7 EGF KO | Cancer cell line | Female |
| CVCL_B9HA | Abcam A-549 EGF KO | Cancer cell line | Male |
| CVCL_D7P7 | Ubigene A-549 EGF KO | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00168987 | PHASE4 | COMPLETED | Influence of an Oral Nutritional Supplement Rich in Omega-3 Fatty Acids on Functional State and Quality of Life in Malnourished Patients With Gastroenterological Tumors |
| NCT00280709 | PHASE4 | COMPLETED | Biliary Metal Stent Study: Metal Stents for Management of Distal Malignant Biliary Obstruction |
| NCT00797121 | PHASE4 | UNKNOWN | Preoperative Biliary Drainage for Resectable Hilar Cholangiocarcinoma |
| NCT01111591 | PHASE4 | UNKNOWN | Cyclooxygenase-2 Inhibitor for Adjuvant Anticancer Effect in Patients With Biliary-pancreas Cancer |
| NCT01256034 | PHASE4 | COMPLETED | Effects of Preoperative Immunonutrition in Patients Undergoing Pancreaticoduodenectomy |
| NCT01256047 | PHASE4 | COMPLETED | Effects of Preoperative Immunonutrition in Patients Undergoing Hepatectomy |
| NCT01642875 | PHASE4 | UNKNOWN | Early Oral Versus Enteral Nutrition After Pancreatoduodenectomy |
| NCT02027311 | PHASE4 | COMPLETED | Etomidate vs. Midazolam for Sedation During ERCP |
| NCT02174575 | PHASE4 | WITHDRAWN | Anesthetic Agents and Acute Kidney Injury After Liver Resection Surgery |
| NCT07486713 | PHASE4 | RECRUITING | Olutasidenib DDI Study in Patients With IDH1 Mutation Positive Malignancies |
| NCT00540735 | PHASE3 | TERMINATED | Efficiency Evaluation of Photodynamic Therapy With Photofrin® on Unresectable Type III or IV Cholangiocarcinomas |
| NCT00653978 | PHASE3 | UNKNOWN | Unilateral Versus Bilateral Stents for Bismuth Type II and III Malignant Hilar Strictures |
| NCT00809081 | PHASE3 | UNKNOWN | Early Enteral Feeding After Pylorus Preserving Pancreatoduodenectomy |
| NCT00869635 | PHASE3 | COMPLETED | S-1 and Photodynamic Therapy in Cholangiocarcinoma |
| NCT00907413 | PHASE3 | TERMINATED | Photodynamic Therapy (PDT) Trial for Palliation of Cholangiocarcinoma |
| NCT01926236 | PHASE3 | COMPLETED | Active Symptom Control Alone or With mFOLFOX Chemotherapy for Locally Advanced/ Metastatic Biliary Tract Cancers |
| NCT02170090 | PHASE3 | ACTIVE_NOT_RECRUITING | Adjuvant Chemotherapy With Gemcitabine and Cisplatin Compared to Standard of Care After Curative Intent Resection of Biliary Tract Cancer |
| NCT02548195 | PHASE3 | UNKNOWN | Oxaliplatin+Gemcitabine vs Capecitabine as Adjuvant Therapy for Intrahepatic Cholangiocarcinoma |
| NCT02773485 | PHASE3 | UNKNOWN | Chemo Alone or in Combination With Radiation in Unresectable Cholangiocarcinoma |
| NCT02853474 | PHASE3 | COMPLETED | Early Palliative Care in Patients With Metastatic Upper Gastrointestinal Cancers Treated With First-line Chemotherapy |
| NCT02989857 | PHASE3 | COMPLETED | Study of AG-120 in Previously Treated Advanced Cholangiocarcinoma With IDH1 Mutations (ClarIDHy) |
| NCT03656536 | PHASE3 | TERMINATED | A Study to Evaluate the Efficacy and Safety of Pemigatinib Versus Chemotherapy in Unresectable or Metastatic Cholangiocarcinoma |
| NCT03773302 | PHASE3 | TERMINATED | Phase 3 Study of BGJ398 (Oral Infigratinib) in First Line Cholangiocarcinoma With FGFR2 Gene Fusions/Translocations |
| NCT03779035 | PHASE3 | UNKNOWN | Adjuvant Chemotherapy for Biliary Tract Cancer After Curative Resection |
| NCT04093362 | PHASE3 | TERMINATED | Futibatinib Versus Gemcitabine-Cisplatin Chemotherapy as First-Line Treatment of Patients With Advanced Cholangiocarcinoma Harboring FGFR2 Gene Rearrangements |
| NCT04157985 | PHASE3 | COMPLETED | Evaluating Length of Treatment With PD-1/PD-L1 Inhibitor in Advanced Solid Tumors |
| NCT05823311 | PHASE3 | RECRUITING | Lenvatinib, Tislelizumab Combined with Gemcitabine and Cisplatin (GPLET) in the Treatment of Advanced Cholangiocarcinoma |
| NCT05876754 | PHASE3 | RECRUITING | An Early Access Study of Ivosidenib in Patients With a Pretreated Locally Advanced or Metastatic Cholangiocarcinoma |
| NCT05948475 | PHASE3 | RECRUITING | Study of Tinengotinib VS. Physician’s Choice a Treatment of Subjects With FGFR-altered in Cholangiocarcinoma |
| NCT07155525 | PHASE3 | RECRUITING | Tissue Adhesive Glue Modified Cyanoacrylate (Glubran® 2) in Soft Pancreas |
| NCT07328919 | PHASE3 | NOT_YET_RECRUITING | Efficacy and Safety of TT-00420 (Tinengotinib) Tablets Versus Chemotherapy in Patients With Advanced Intrahepatic Cholangiocarcinoma Harboring FGFR2 Fusions/Rearrangements or Mutations |
| NCT00286013 | PHASE2 | COMPLETED | Feasibility of Radiotherapy and Concomitant Gemcitabine and Oxaliplatin in Locally Advanced Pancreatic Cancer and Distal Cholangiocarcinoma |
| NCT00290316 | PHASE2 | UNKNOWN | Accuracy of Endoscopic Ultrasound for Detection of Tumors of the Liver |
| NCT00350753 | PHASE2 | COMPLETED | Avastin and Tarceva for Upper Gastrointestinal Cancers |
| NCT00356161 | PHASE2 | UNKNOWN | HAI Via Interventionally Implanted Port Catheter Systems |
| NCT00660140 | PHASE2 | COMPLETED | Study of Gemcitabine and Carboplatin in the Treatment of Metastatic or Recurrent Cholangiocarcinoma/Gallbladder Cancer |
| NCT00713687 | PHASE2 | WITHDRAWN | Gemcitabine/Oxaliplatin and Photodynamic Therapy in Cholangiocarcinoma |
| NCT00779454 | PHASE2 | COMPLETED | Combined Biological Treatment and Chemotherapy for Patients With Inoperable Cholangiocarcinoma |
| NCT00832637 | PHASE2 | TERMINATED | Gemcitabine, Oxaliplatin, Tarceva &/or Cisplatin in HCC & Biliary Tree Cancers |
| NCT00948935 | PHASE2 | COMPLETED | Study of Gemcitabine, Irinotecan and Panitumumab in Patients With Advanced and Metastatic Biliary Tract Adenocarcinoma |
Related Atlas pages
- Associated diseases: renal hypomagnesemia 4, familial primary hypomagnesemia with normocalciuria and normocalcemia, head and neck squamous cell carcinoma
- Biomarker drugs (CIViC) (drugs whose response is associated with variants in this gene — CIViC predictive evidence, not targeting): Cetuximab
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cholangiocarcinoma, familial primary hypomagnesemia with normocalciuria and normocalcemia, head and neck squamous cell carcinoma, hereditary renal cell carcinoma, renal hypomagnesemia 4