EHMT2-AS1

Summary

EHMT2-AS1 (EHMT2 and SLC44A4 antisense RNA 1, HGNC:39751) is a long non-coding RNA gene on chromosome 6p21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39751
Approved symbol	EHMT2-AS1
Name	EHMT2 and SLC44A4 antisense RNA 1
Location	6p21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237080
Ensembl biotype	lncRNA
Entrez	107986588
RNAcentral	URS0000D6435E — lncRNA, 2571 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000434689, ENST00000642849

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000434689 — 2 exons

Exon	Start	End
ENSE00001681274	31883883	31884204
ENSE00001737159	31883761	31883811

Expression profiles

Bgee: expression breadth ubiquitous, 153 present calls, max score 78.56.

Top tissues by expression

240 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of transverse colon	UBERON:0004991	78.56	gold quality
pancreatic ductal cell	CL:0002079	77.44	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	76.09	gold quality
tendon of biceps brachii	UBERON:0008188	73.37	gold quality
rectum	UBERON:0001052	71.88	gold quality
nasal cavity epithelium	UBERON:0005384	71.77	gold quality
bone marrow cell	CL:0002092	71.56	silver quality
transverse colon	UBERON:0001157	71.20	gold quality
myocardium	UBERON:0002349	70.57	gold quality
upper arm skin	UBERON:0004263	70.35	gold quality
right uterine tube	UBERON:0001302	70.18	gold quality
prostate gland	UBERON:0002367	70.14	gold quality
parotid gland	UBERON:0001831	68.71	gold quality
small intestine Peyer’s patch	UBERON:0003454	68.06	gold quality
colonic epithelium	UBERON:0000397	67.82	silver quality
small intestine	UBERON:0002108	67.82	gold quality
cardiac muscle of right atrium	UBERON:0003379	67.78	gold quality
left ventricle myocardium	UBERON:0006566	67.63	gold quality
decidua	UBERON:0002450	67.14	gold quality
heart right ventricle	UBERON:0002080	66.42	gold quality
cartilage tissue	UBERON:0002418	66.34	gold quality
trabecular bone tissue	UBERON:0002483	66.01	gold quality
body of stomach	UBERON:0001161	65.65	gold quality
duodenum	UBERON:0002114	65.11	gold quality
vena cava	UBERON:0004087	64.64	gold quality
intestine	UBERON:0000160	64.54	gold quality
ventricular zone	UBERON:0003053	64.49	gold quality
bone marrow	UBERON:0002371	64.33	silver quality
medial globus pallidus	UBERON:0002477	64.17	gold quality
minor salivary gland	UBERON:0001830	64.09	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.20

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.