EIF2B5
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Also known as EIF2BepsilonEIF-2B
Summary
EIF2B5 (eukaryotic translation initiation factor 2B subunit epsilon, HGNC:3261) is a protein-coding gene on chromosome 3q27.1, encoding Translation initiation factor eIF2B subunit epsilon (Q13144). Acts as a component of the translation initiation factor 2B (eIF2B) complex, which catalyzes the exchange of GDP for GTP on eukaryotic initiation factor 2 (eIF2) gamma subunit. It is a common-essential gene (DepMap: required in 97.0% of cancer cell lines).
This gene encodes one of five subunits of eukaryotic translation initiation factor 2B (EIF2B), a GTP exchange factor for eukaryotic initiation factor 2 and an essential regulator for protein synthesis. Mutations in this gene and the genes encoding other EIF2B subunits have been associated with leukoencephalopathy with vanishing white matter.
Source: NCBI Gene 8893 — RefSeq curated summary.
At a glance
- Gene–disease (curated): leukoencephalopathy with vanishing white matter 5 (Definitive, ClinGen) — +3 more curated relationships
- GWAS associations: 28
- Clinical variants (ClinVar): 853 total — 49 pathogenic, 46 likely-pathogenic
- Phenotypes (HPO): 11
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 97.0% of screened cell lines (common-essential)
- MANE Select transcript:
NM_003907
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3261 |
| Approved symbol | EIF2B5 |
| Name | eukaryotic translation initiation factor 2B subunit epsilon |
| Location | 3q27.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | EIF2Bepsilon, EIF-2B |
| Ensembl gene | ENSG00000145191 |
| Ensembl biotype | protein_coding |
| OMIM | 603945 |
| Entrez | 8893 |
Gene structure
Transcript identifiers
Ensembl transcripts: 44 — 17 nonsense_mediated_decay, 16 protein_coding, 10 retained_intron, 1 protein_coding_CDS_not_defined
ENST00000432569, ENST00000432982, ENST00000465218, ENST00000468748, ENST00000471832, ENST00000479250, ENST00000481054, ENST00000484154, ENST00000491008, ENST00000491144, ENST00000492226, ENST00000492773, ENST00000493740, ENST00000498831, ENST00000647636, ENST00000647909, ENST00000648145, ENST00000648189, ENST00000648256, ENST00000648314, ENST00000648599, ENST00000648630, ENST00000648682, ENST00000648882, ENST00000648890, ENST00000648915, ENST00000649545, ENST00000649688, ENST00000649814, ENST00000650244, ENST00000650270, ENST00000896962, ENST00000896963, ENST00000896965, ENST00000896966, ENST00000896968, ENST00000896969, ENST00000926646, ENST00000926647, ENST00000926648, ENST00000926649, ENST00000950216, ENST00000950217, ENST00000950218
RefSeq mRNA: 1 — MANE Select: NM_003907
NM_003907
CCDS: CCDS3252
Canonical transcript exons
ENST00000648915 — 16 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002454580 | 184144884 | 184145311 |
| ENSE00003475918 | 184143052 | 184143142 |
| ENSE00003492021 | 184140418 | 184140730 |
| ENSE00003514319 | 184136612 | 184136736 |
| ENSE00003534680 | 184143442 | 184143565 |
| ENSE00003536383 | 184142502 | 184142603 |
| ENSE00003617725 | 184140080 | 184140157 |
| ENSE00003632558 | 184144597 | 184144707 |
| ENSE00003643722 | 184137898 | 184138075 |
| ENSE00003649614 | 184141925 | 184142070 |
| ENSE00003651593 | 184138166 | 184138246 |
| ENSE00003656619 | 184144099 | 184144224 |
| ENSE00003668116 | 184142779 | 184142886 |
| ENSE00003675665 | 184137620 | 184137805 |
| ENSE00003682432 | 184142237 | 184142378 |
| ENSE00003835844 | 184135358 | 184135580 |
Expression profiles
Bgee: expression breadth ubiquitous, 286 present calls, max score 95.25.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 28.7584 / max 166.4055, expressed in 1821 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 40123 | 27.4783 | 1821 |
| 40121 | 0.6996 | 298 |
| 40122 | 0.5805 | 308 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| sural nerve | UBERON:0015488 | 95.25 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 95.13 | gold quality |
| gastrocnemius | UBERON:0001388 | 94.76 | gold quality |
| adenohypophysis | UBERON:0002196 | 94.74 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 94.70 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 94.56 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 94.52 | gold quality |
| muscle of leg | UBERON:0001383 | 94.50 | gold quality |
| cerebellar cortex | UBERON:0002129 | 94.31 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 94.24 | silver quality |
| pituitary gland | UBERON:0000007 | 94.13 | gold quality |
| minor salivary gland | UBERON:0001830 | 93.97 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 93.83 | gold quality |
| granulocyte | CL:0000094 | 93.79 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 93.78 | gold quality |
| skin of leg | UBERON:0001511 | 93.69 | gold quality |
| skin of abdomen | UBERON:0001416 | 93.59 | gold quality |
| body of stomach | UBERON:0001161 | 93.58 | gold quality |
| metanephros cortex | UBERON:0010533 | 93.52 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 93.51 | gold quality |
| rectum | UBERON:0001052 | 93.37 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 93.34 | gold quality |
| esophagus mucosa | UBERON:0002469 | 93.33 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 93.31 | gold quality |
| right uterine tube | UBERON:0001302 | 93.31 | gold quality |
| body of pancreas | UBERON:0001150 | 93.27 | gold quality |
| tendon | UBERON:0000043 | 93.20 | gold quality |
| tonsil | UBERON:0002372 | 93.19 | gold quality |
| transverse colon | UBERON:0001157 | 93.13 | gold quality |
| cerebellum | UBERON:0002037 | 93.13 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.98 |
| E-MTAB-7606 | no | 763.69 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NFKB
miRNA regulators (miRDB)
25 targeting EIF2B5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-300 | 99.92 | 71.76 | 2856 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-125A-5P | 99.36 | 70.59 | 1640 |
| HSA-MIR-125B-5P | 99.36 | 70.36 | 1662 |
| HSA-MIR-130A-5P | 99.33 | 70.26 | 2623 |
| HSA-MIR-5589-3P | 99.29 | 68.30 | 1443 |
| HSA-MIR-544B | 99.18 | 67.41 | 1632 |
| HSA-MIR-4717-3P | 99.06 | 66.34 | 1072 |
| HSA-MIR-1909-3P | 99.03 | 66.56 | 1662 |
| HSA-MIR-922 | 99.02 | 67.23 | 1838 |
| HSA-MIR-1228-3P | 99.00 | 66.53 | 857 |
| HSA-MIR-4326 | 98.97 | 67.63 | 962 |
| HSA-MIR-1183 | 98.75 | 67.10 | 1116 |
| HSA-MIR-6728-3P | 98.63 | 67.63 | 1534 |
| HSA-MIR-4691-5P | 98.41 | 66.77 | 1343 |
| HSA-MIR-6792-3P | 98.41 | 66.86 | 1359 |
| HSA-MIR-621 | 96.76 | 66.89 | 371 |
| HSA-MIR-6777-3P | 95.35 | 64.30 | 699 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 97.0% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 25)
- Cree leukoencephalopathy and CACH/VWM disease are allelic at the EIF2B5 locus. (PMID:12325082)
- Mutation in EIF2B5 causes childhood ataxia with central nervous system hypomyelination/ vanishing white matter leukodystrophy. (PMID:12707859)
- We demonstrated that mutations in the gene EIF2B5 cause “leukoencephalopathy with vanishing white matter.” This gene encodes one of the five subunits of the translation factor eIF2B. (PMID:14572143)
- Biochemical analyses indicate that mutations analyzed in eIF2Balpha and -epsilon reduce the steady-state level of the affected subunit, while the most severe mutant tested, eIF2Bbeta(V341D), forms complexes with reduced stability and lower eIF2B activity. (PMID:14993275)
- mutations in EIF2b5 causes a specific reduction in the generation of GFAP+ astrocytes in vanishing white matter disease (PMID:15723074)
- Arg113His mutation in eIF2B5 associated with adult onset of vanishing white matter leukoencephalopathy is not present in multiple sclerosis patients (PMID:17439913)
- We describe progressive megalencephaly and severe brain abnormalities due to specific EIF2Bepsilon mutations in two unrelated families. (PMID:17646634)
- Study reports 9 novel mutations in EIF2B genes in 8 patients, increasing number of known mutations to more than 120. Using homology modeling, analyzed the impact of novel mutations on the 5 subunits of eIF2B protein (alpha, beta, gamma, delta, epsilon) (PMID:18263758)
- These data support the importance of the non-catalytic domain of the eIF2Bepsilon subunit in the eIF2B complex formation and activity. (PMID:18294360)
- no evidence for the involvement of EIF2B5 in multiple sclerosis susceptibility in France (PMID:18562513)
- Resistance exercise decreases eIF2Bepsilon phosphorylation and potentiates the feeding-induced stimulation of p70S6K1 and rpS6 in young men. (PMID:18565837)
- The clinical phenotype in vanishing white matter disease is influenced by the combination of both mutations(p.Arg113His and p.Thr91Ala/p.Arg339any). Females tend to do better than males. (PMID:20975056)
- crystal structure of the guanine nucleotide exchange factor for elf2 (PMID:21204011)
- Functional analysis of recently identified mutations in eukaryotic translation initiation factor 2Bepsilon (eIF2Bepsilon) identified in Chinese patients with vanishing white matter disease (PMID:21307862)
- Also a mutation c.1913G>A[p.Arg638 His] in exon 14 of the EIF2B5-Gens as single nucleotide polymorphism. (PMID:21503715)
- Missense mutations in EIF2B5 are associated with multiple sclerosis. (PMID:24980014)
- Patient exhibits an early-infantile onset and progressive disease course resembling Cree leukoencephalopathy, suggesting a severe functional disruption of eIF2Bepsilon caused by R195H as well as by I408T mutations. (PMID:25457085)
- This study demonstrated that no evidence for a role of Ile587Val polymorphism of EIF2B5 gene in multiple sclerosis in Kashmir Valley if India. (PMID:26671108)
- Exon-level analyses classified > 1,000 mRNAs as alternatively spliced under hypoxia and uncovered a unique retained intron (RI) in the master regulator of translation initiation, EIF2B5. (PMID:28961236)
- low expression found in ovarian cancer tissues and correlated with survival status (PMID:32000373)
- Foetal onset of EIF2B related disorder in two siblings: cerebellar hypoplasia with absent Bergmann glia and severe hypomyelination. (PMID:32293553)
- eIF2B as a Target for Viral Evasion of PKR-Mediated Translation Inhibition. (PMID:32665273)
- Vanishing white matter disease expression of truncated EIF2B5 activates induced stress response. (PMID:33300869)
- CircAHNAK upregulates EIF2B5 expression to inhibit the progression of ovarian cancer by modulating the JAK2/STAT3 signaling pathway. (PMID:35710311)
- A novel missense variant in EIF2B5 identified in a consanguineous Iranian family with vanishing white matter disease and a brief review of the literature. (PMID:37674283)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | eif2b5 | ENSDARG00000074995 |
| mus_musculus | Eif2b5 | ENSMUSG00000003235 |
| rattus_norvegicus | Eif2b5 | ENSRNOG00000038160 |
| drosophila_melanogaster | eIF2Bepsilon | FBGN0023512 |
| caenorhabditis_elegans | WBGENE00008428 |
Paralogs (3): EIF2B3 (ENSG00000070785), GMPPA (ENSG00000144591), GMPPB (ENSG00000173540)
Protein
Protein identifiers
Translation initiation factor eIF2B subunit epsilon — Q13144 (reviewed: Q13144)
Alternative names: eIF2B GDP-GTP exchange factor subunit epsilon
All UniProt accessions (18): A0A3B3IRP4, A0A3B3IS56, A0A3B3ISA5, A0A3B3ISI2, A0A3B3ISM8, A0A3B3ISS1, Q13144, A0A3B3IST9, A0A3B3ISV1, A0A3B3ISX3, A0A3B3IT53, A0A3B3ITG6, A0A3B3ITK8, A0A3B3ITQ2, A0A3B3IUB1, A0A3B3IUF2, C9JRD9, H7C2X0
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a component of the translation initiation factor 2B (eIF2B) complex, which catalyzes the exchange of GDP for GTP on eukaryotic initiation factor 2 (eIF2) gamma subunit. Its guanine nucleotide exchange factor activity is repressed when bound to eIF2 complex phosphorylated on the alpha subunit, thereby limiting the amount of methionyl-initiator methionine tRNA available to the ribosome and consequently global translation is repressed.
Subunit / interactions. Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.
Subcellular location. Cytoplasm. Cytosol.
Post-translational modifications. Phosphorylated at Ser-544 by DYRK2; this is required for subsequent phosphorylation by GSK3B. Phosphorylated on serine and threonine residues by GSK3B; phosphorylation inhibits its function. Polyubiquitinated, probably by NEDD4.
Disease relevance. Leukoencephalopathy with vanishing white matter 5 (VWM5) [MIM:620315] An autosomal recessive brain disease characterized by neurological features including progressive cerebellar ataxia, spasticity, and cognitive deficits. Brain imaging shows abnormal white matter that vanishes over time and is replaced by cerebrospinal fluid. Disease severity ranges from fatal infantile forms to adult forms without neurological deterioration. The disease is progressive with, in most individuals, additional episodes of rapid deterioration following febrile infections or minor head trauma. Death may occurs after a variable period after disease onset, usually following an episode of fever and coma. A subset of affected females with milder forms of the disease who survive to adolescence exhibit ovarian dysfunction. This variant of the disorder is called ovarioleukodystrophy. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Activated by the chemical integrated stress response (ISR) inhibitor ISRIB which stimulates guanine nucleotide exchange factor activity for both phosphorylated and unphosphorylated eIF2.
Similarity. Belongs to the eIF-2B gamma/epsilon subunits family.
RefSeq proteins (1): NP_003898* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003307 | W2_domain | Domain |
| IPR011004 | Trimer_LpxA-like_sf | Homologous_superfamily |
| IPR016024 | ARM-type_fold | Homologous_superfamily |
| IPR029044 | Nucleotide-diphossugar_trans | Homologous_superfamily |
| IPR035543 | eIF-2B_epsilon_N | Domain |
| IPR044123 | W2_eIF2B_epsilon | Domain |
| IPR051956 | eIF2B_epsilon | Family |
| IPR056764 | LbH_EIF2B3/5 | Domain |
Pfam: PF02020, PF25084
UniProt features (119 total): sequence variant 31, strand 30, helix 25, modified residue 12, turn 7, cross-link 4, compositionally biased region 4, region of interest 3, initiator methionine 1, chain 1, domain 1
Structure
Experimental structures (PDB)
26 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3JUI | X-RAY DIFFRACTION | 2 |
| 7VLK | ELECTRON MICROSCOPY | 2.27 |
| 7F64 | ELECTRON MICROSCOPY | 2.42 |
| 7RLO | ELECTRON MICROSCOPY | 2.6 |
| 9HVE | ELECTRON MICROSCOPY | 2.7 |
| 7F66 | ELECTRON MICROSCOPY | 2.76 |
| 6CAJ | ELECTRON MICROSCOPY | 2.8 |
| 7L70 | ELECTRON MICROSCOPY | 2.8 |
| 7TRJ | ELECTRON MICROSCOPY | 2.8 |
| 9QC6 | ELECTRON MICROSCOPY | 2.83 |
| 8TQZ | ELECTRON MICROSCOPY | 2.9 |
| 7KMF | ELECTRON MICROSCOPY | 2.91 |
| 7L7G | ELECTRON MICROSCOPY | 3 |
| 6O85 | ELECTRON MICROSCOPY | 3.03 |
| 6O9Z | ELECTRON MICROSCOPY | 3.03 |
| 9HVD | ELECTRON MICROSCOPY | 3.04 |
| 8TQO | ELECTRON MICROSCOPY | 3.1 |
| 6O81 | ELECTRON MICROSCOPY | 3.21 |
| 7F67 | ELECTRON MICROSCOPY | 3.59 |
| 7D45 | ELECTRON MICROSCOPY | 3.8 |
| 7D44 | ELECTRON MICROSCOPY | 4 |
| 7D46 | ELECTRON MICROSCOPY | 4 |
| 6EZO | ELECTRON MICROSCOPY | 4.1 |
| 6K71 | ELECTRON MICROSCOPY | 4.3 |
| 7D43 | ELECTRON MICROSCOPY | 4.3 |
| 6K72 | ELECTRON MICROSCOPY | 4.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13144-F1 | 79.35 | 0.41 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (16): 2, 19, 27, 130, 322, 450, 466, 469, 532, 540, 544, 717, 61, 103, 141, 217
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-72731 | Recycling of eIF2:GDP |
MSigDB gene sets: 235 (showing top):
GOBP_CYTOPLASMIC_TRANSLATION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, TGCGCANK_UNKNOWN, GOBP_RESPONSE_TO_ENDOPLASMIC_RETICULUM_STRESS, GOBP_ANTIGEN_RECEPTOR_MEDIATED_SIGNALING_PATHWAY, GOBP_GLIAL_CELL_DEVELOPMENT, GOBP_TRANSLATIONAL_INITIATION, GOBP_NEUROGENESIS, GOMF_TRANSLATION_INITIATION_FACTOR_ACTIVITY, GOBP_FOREBRAIN_DEVELOPMENT, GOBP_TRANSLATION, GOBP_POSITIVE_REGULATION_OF_TRANSLATIONAL_INITIATION, GOBP_POST_TRANSCRIPTIONAL_REGULATION_OF_GENE_EXPRESSION, GOBP_OVARIAN_FOLLICLE_DEVELOPMENT, GOBP_REGULATION_OF_IMMUNE_RESPONSE
GO Biological Process (17): ovarian follicle development (GO:0001541), cytoplasmic translational initiation (GO:0002183), translational initiation (GO:0006413), response to heat (GO:0009408), response to glucose (GO:0009749), astrocyte development (GO:0014002), oligodendrocyte development (GO:0014003), hippocampus development (GO:0021766), response to endoplasmic reticulum stress (GO:0034976), myelination (GO:0042552), positive regulation of apoptotic process (GO:0043065), response to peptide hormone (GO:0043434), positive regulation of translational initiation (GO:0045948), astrocyte differentiation (GO:0048708), T cell receptor signaling pathway (GO:0050852), translation (GO:0006412), positive regulation of translation (GO:0045727)
GO Molecular Function (4): translation initiation factor activity (GO:0003743), guanyl-nucleotide exchange factor activity (GO:0005085), translation initiation factor binding (GO:0031369), protein binding (GO:0005515)
GO Cellular Component (4): nucleus (GO:0005634), cytoplasm (GO:0005737), cytosol (GO:0005829), eukaryotic translation initiation factor 2B complex (GO:0005851)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Cap-dependent Translation Initiation | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| translational initiation | 4 |
| anatomical structure development | 2 |
| translation | 2 |
| glial cell development | 2 |
| cellular anatomical structure | 2 |
| cytoplasm | 2 |
| female gonad development | 1 |
| cytoplasmic translation | 1 |
| formation of translation initiation ternary complex | 1 |
| metabolic process | 1 |
| response to stress | 1 |
| response to temperature stimulus | 1 |
| response to hexose | 1 |
| astrocyte differentiation | 1 |
| oligodendrocyte differentiation | 1 |
| pallium development | 1 |
| limbic system development | 1 |
| cellular response to stress | 1 |
| axon ensheathment | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| positive regulation of programmed cell death | 1 |
| response to hormone | 1 |
| response to nitrogen compound | 1 |
| response to oxygen-containing compound | 1 |
| regulation of translational initiation | 1 |
| positive regulation of translation | 1 |
| central nervous system development | 1 |
| glial cell differentiation | 1 |
| antigen receptor-mediated signaling pathway | 1 |
| peptidyltransferase activity | 1 |
| translational elongation | 1 |
| translational termination | 1 |
| macromolecule biosynthetic process | 1 |
| protein metabolic process | 1 |
| protein biosynthetic process | 1 |
| regulation of translation | 1 |
| positive regulation of gene expression | 1 |
| positive regulation of protein metabolic process | 1 |
| translation factor activity | 1 |
Protein interactions and networks
STRING
2560 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| EIF2B5 | EIF2B1 | Q14232 | 998 |
| EIF2B5 | EIF2B2 | P49770 | 995 |
| EIF2B5 | EIF2B4 | Q9UI10 | 995 |
| EIF2B5 | EIF2B3 | Q9NR50 | 985 |
| EIF2B5 | EIF2S3 | P41091 | 961 |
| EIF2B5 | RABIF | P47224 | 901 |
| EIF2B5 | EIF2AK4 | Q9P2K8 | 849 |
| EIF2B5 | EIF2S1 | P05198 | 818 |
| EIF2B5 | EIF2S2 | P20042 | 759 |
| EIF2B5 | EIF5 | P55010 | 736 |
| EIF2B5 | EIF2AK3 | Q9NZJ5 | 649 |
| EIF2B5 | EIF3M | Q7L2H7 | 636 |
| EIF2B5 | EIF1 | P41567 | 580 |
| EIF2B5 | GSK3B | P49841 | 558 |
| EIF2B5 | PLP1 | P04400 | 536 |
IntAct
172 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| STX11 | SNAP23 | psi-mi:“MI:0914”(association) | 0.900 |
| EIF2B1 | EIF2B2 | psi-mi:“MI:0915”(physical association) | 0.860 |
| EIF2B1 | EIF2B5 | psi-mi:“MI:0914”(association) | 0.860 |
| EIF2B1 | EIF2B2 | psi-mi:“MI:0914”(association) | 0.860 |
| EIF2B2 | EIF2B5 | psi-mi:“MI:0915”(physical association) | 0.830 |
| STX11 | EIF2B5 | psi-mi:“MI:0915”(physical association) | 0.670 |
| EIF2B2 | SLC27A2 | psi-mi:“MI:0914”(association) | 0.640 |
| ILVBL | COG7 | psi-mi:“MI:0914”(association) | 0.640 |
| P2RX4 | FAM20B | psi-mi:“MI:0914”(association) | 0.640 |
| DYNC1H1 | EIF2B5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLK6 | EIF2B5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KSR2 | POLR3A | psi-mi:“MI:0914”(association) | 0.530 |
| GYPB | TCAF2 | psi-mi:“MI:0914”(association) | 0.530 |
| EPHA1 | EXOC5 | psi-mi:“MI:0914”(association) | 0.530 |
| PTGER3 | PIK3R2 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (257): EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B5 (Affinity Capture-MS), EIF2B2 (Co-fractionation)
ESM2 similar proteins: A0A0B7P9G0, A0A0R4IMY7, A0JPA0, D3ZAA9, O35454, P0C1Q3, P0C588, P16067, P20594, P32232, P33402, P35525, P46197, P47823, P51432, P51788, Q01970, Q13144, Q14168, Q1LWG4, Q32PX9, Q3TWN3, Q3USB7, Q3V384, Q4U2V3, Q502J0, Q5EBA1, Q5U2P1, Q62688, Q66K14, Q69ZF7, Q6P4Q7, Q7L5N7, Q80YD1, Q8BYI6, Q8CIR4, Q8IYB8, Q8K394, Q8WV93, Q91WT9
Diamond homologs: P47823, P56287, Q0P8J8, Q13144, Q54RF3, Q5R7L4, Q5ZLT7, Q64350, Q6P2Z0, Q6P7P5, Q7L1Q6, Q8AVM7, Q8CHW4, Q9CQC6, D4GU70, P32501, P37820, P87163, Q1LUC1, Q2L4X1, Q4R6R4, Q6PD83, Q88QT2, Q91VK1, Q9WTT7, Q9Y6E2, A2VD83, A3QMC8, B9CM12, O22287, O31822, O74484, O74624, O93827, P08075, P0A2K7, P0A2K8, P0AAB6, P0AAB7, P0C5I2
SIGNOR signaling
16 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GSK3B | down-regulates | EIF2B5 | binding |
| GSK3B | down-regulates | EIF2B5 | phosphorylation |
| CSNK1A1 | unknown | EIF2B5 | phosphorylation |
| CSNK2A1 | “up-regulates activity” | EIF2B5 | phosphorylation |
| CSNK2A2 | “up-regulates activity” | EIF2B5 | phosphorylation |
| GSK3A | “down-regulates activity” | EIF2B5 | phosphorylation |
| GSK3B | “down-regulates activity” | EIF2B5 | phosphorylation |
| EIF2B5 | “up-regulates activity” | EIF2S1 | “guanine nucleotide exchange factor” |
| EIF2B5 | “up-regulates activity” | EIF2S2 | “guanine nucleotide exchange factor” |
| EIF2B5 | “up-regulates activity” | EIF2S3 | “guanine nucleotide exchange factor” |
| EIF2B5 | “up-regulates activity” | Ternary_GTP_eIF2_tRNA_complex | “guanine nucleotide exchange factor” |
| FRAT1 | “up-regulates activity” | EIF2B5 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 181 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| T cell costimulation | 7 | 16.9× | 1e-04 |
| translational initiation | 7 | 16.2× | 1e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
853 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 49 |
| Likely pathogenic | 46 |
| Uncertain significance | 231 |
| Likely benign | 438 |
| Benign | 14 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1028674 | NM_003907.3(EIF2B5):c.1485C>G (p.Tyr495Ter) | Pathogenic |
| 1070136 | NM_003907.3(EIF2B5):c.1196del (p.Gly399fs) | Pathogenic |
| 1071687 | NM_003907.3(EIF2B5):c.1543_1544del (p.Trp515fs) | Pathogenic |
| 1072193 | NM_003907.3(EIF2B5):c.1487del (p.Leu496fs) | Pathogenic |
| 1335978 | NM_003907.3(EIF2B5):c.820C>T (p.Arg274Ter) | Pathogenic |
| 1352082 | NM_003907.3(EIF2B5):c.1182del (p.Tyr395fs) | Pathogenic |
| 1397252 | NM_003907.3(EIF2B5):c.702dup (p.Ser235Ter) | Pathogenic |
| 1405188 | NM_003907.3(EIF2B5):c.1590del (p.Glu530fs) | Pathogenic |
| 1420544 | NM_003907.3(EIF2B5):c.805C>T (p.Arg269Ter) | Pathogenic |
| 1451172 | NM_003907.3(EIF2B5):c.406C>T (p.Arg136Cys) | Pathogenic |
| 1451793 | NM_003907.3(EIF2B5):c.946C>T (p.Arg316Ter) | Pathogenic |
| 1453780 | NM_003907.3(EIF2B5):c.1884G>A (p.Trp628Ter) | Pathogenic |
| 1453942 | NM_003907.3(EIF2B5):c.1129del (p.Ser377fs) | Pathogenic |
| 1685765 | NM_003907.3(EIF2B5):c.889G>A (p.Gly297Ser) | Pathogenic |
| 1707203 | NM_003907.3(EIF2B5):c.799C>T (p.Gln267Ter) | Pathogenic |
| 1806183 | NM_003907.3(EIF2B5):c.1264C>T (p.Arg422Ter) | Pathogenic |
| 195203 | NM_003907.3(EIF2B5):c.318A>T (p.Leu106Phe) | Pathogenic |
| 1994086 | NM_003907.3(EIF2B5):c.350_351del (p.Leu117fs) | Pathogenic |
| 2025301 | NM_003907.3(EIF2B5):c.1484del (p.Tyr495fs) | Pathogenic |
| 2097660 | NM_003907.3(EIF2B5):c.1694delinsTTTCTTGTGCATCTCCACTACAGAGGAGCGGGGCATCTCCACTAC (p.Lys565fs) | Pathogenic |
| 2098216 | NM_003907.3(EIF2B5):c.250del (p.Thr84fs) | Pathogenic |
| 2203468 | NM_003907.3(EIF2B5):c.218T>G (p.Val73Gly) | Pathogenic |
| 2424793 | NC_000003.11:g.(?183857858)(183862741_?)del | Pathogenic |
| 2691284 | NM_003907.3(EIF2B5):c.1930G>T (p.Glu644Ter) | Pathogenic |
| 2734599 | NM_003907.3(EIF2B5):c.1684C>T (p.Gln562Ter) | Pathogenic |
| 2734601 | NM_003907.3(EIF2B5):c.1813del (p.Leu605fs) | Pathogenic |
| 2736131 | NM_003907.3(EIF2B5):c.470C>G (p.Ser157Ter) | Pathogenic |
| 2766433 | NM_003907.3(EIF2B5):c.872dup (p.Thr292fs) | Pathogenic |
| 2768396 | NM_003907.3(EIF2B5):c.692_702del (p.Leu230_Phe231insTer) | Pathogenic |
| 2782153 | NM_003907.3(EIF2B5):c.792delinsACA (p.Phe264fs) | Pathogenic |
SpliceAI
2675 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:184136684:G:GT | donor_gain | 1.0000 |
| 3:184136685:A:T | donor_gain | 1.0000 |
| 3:184136737:G:GG | donor_gain | 1.0000 |
| 3:184137619:GGA:G | acceptor_gain | 1.0000 |
| 3:184137619:GGAA:G | acceptor_gain | 1.0000 |
| 3:184138006:GGAT:G | donor_gain | 1.0000 |
| 3:184138164:A:AG | acceptor_gain | 1.0000 |
| 3:184138165:G:GG | acceptor_gain | 1.0000 |
| 3:184138165:GA:G | acceptor_gain | 1.0000 |
| 3:184138242:CTCAG:C | donor_loss | 1.0000 |
| 3:184138243:TCAGG:T | donor_loss | 1.0000 |
| 3:184138244:CAG:C | donor_loss | 1.0000 |
| 3:184138245:AGGT:A | donor_loss | 1.0000 |
| 3:184138246:GGTGA:G | donor_loss | 1.0000 |
| 3:184138247:GTGA:G | donor_loss | 1.0000 |
| 3:184138248:T:G | donor_loss | 1.0000 |
| 3:184140074:CCACA:C | acceptor_loss | 1.0000 |
| 3:184140075:CACA:C | acceptor_loss | 1.0000 |
| 3:184140077:CA:C | acceptor_loss | 1.0000 |
| 3:184140155:G:GT | donor_gain | 1.0000 |
| 3:184142231:CCTTA:C | acceptor_loss | 1.0000 |
| 3:184142232:CTTAG:C | acceptor_loss | 1.0000 |
| 3:184142233:TTA:T | acceptor_loss | 1.0000 |
| 3:184142234:TAG:T | acceptor_loss | 1.0000 |
| 3:184142235:A:AC | acceptor_loss | 1.0000 |
| 3:184142235:A:AG | acceptor_gain | 1.0000 |
| 3:184142235:AG:A | acceptor_gain | 1.0000 |
| 3:184142235:AGGT:A | acceptor_gain | 1.0000 |
| 3:184142235:AGGTG:A | acceptor_gain | 1.0000 |
| 3:184142236:G:GT | acceptor_gain | 1.0000 |
AlphaMissense
4744 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:184137706:G:C | R136P | 1.000 |
| 3:184140104:T:C | F264L | 1.000 |
| 3:184140106:T:A | F264L | 1.000 |
| 3:184140106:T:G | F264L | 1.000 |
| 3:184136694:T:A | V93D | 0.999 |
| 3:184137693:G:A | G132R | 0.999 |
| 3:184137693:G:C | G132R | 0.999 |
| 3:184137694:G:A | G132E | 0.999 |
| 3:184137703:T:C | L135P | 0.999 |
| 3:184137705:C:A | R136S | 0.999 |
| 3:184138237:T:G | C252W | 0.999 |
| 3:184140103:C:A | N263K | 0.999 |
| 3:184140103:C:G | N263K | 0.999 |
| 3:184143067:T:A | V557D | 0.999 |
| 3:184143118:T:C | L574P | 0.999 |
| 3:184143127:A:T | E577V | 0.999 |
| 3:184143128:A:C | E577D | 0.999 |
| 3:184143128:A:T | E577D | 0.999 |
| 3:184143135:T:C | S580P | 0.999 |
| 3:184143139:T:C | L581P | 0.999 |
| 3:184143447:C:A | A584D | 0.999 |
| 3:184144906:T:C | L710P | 0.999 |
| 3:184137694:G:T | G132V | 0.998 |
| 3:184137703:T:A | L135H | 0.998 |
| 3:184137741:T:C | F148L | 0.998 |
| 3:184137743:T:A | F148L | 0.998 |
| 3:184137743:T:G | F148L | 0.998 |
| 3:184138235:T:C | C252R | 0.998 |
| 3:184140090:T:C | L259P | 0.998 |
| 3:184140105:T:G | F264C | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000246272 (3:184138897 A>C), RS1000521365 (3:184144441 T>C), RS1000636351 (3:184136677 T>C,G), RS1000701491 (3:184138649 C>A,T), RS1000985816 (3:184136976 A>G), RS1001303286 (3:184140273 C>A,T), RS1001347715 (3:184133627 G>A), RS1001401609 (3:184133927 T>C), RS1002008468 (3:184137193 G>A), RS1002081116 (3:184145691 C>T), RS1002474766 (3:184138921 C>T), RS1002697060 (3:184140361 TGGG>T,TGG,TGGGG), RS1003294633 (3:184138756 C>T), RS1003746706 (3:184135207 C>A,T), RS1003972659 (3:184134972 G>A)
Disease associations
OMIM: gene MIM:603945 | disease phenotypes: MIM:603896, MIM:620315, MIM:312080
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| leukoencephalopathy with vanishing white matter | Definitive | Autosomal recessive |
| leukoencephalopathy with vanishing white matter 5 | Definitive | Autosomal recessive |
| leukoencephalopathy with vanishing white matter 1 | Strong | Autosomal recessive |
| ovarioleukodystrophy | Supportive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| leukoencephalopathy with vanishing white matter 5 | Definitive | AR |
Mondo (7): leukoencephalopathy with vanishing white matter (MONDO:0800448), leukoencephalopathy with vanishing white matter 5 (MONDO:0957873), leukoencephalopathy with vanishing white matter 1 (MONDO:0020507), leukodystrophy (MONDO:0019046), hereditary breast ovarian cancer syndrome (MONDO:0003582), (MONDO:0011380), (MONDO:0020506)
Orphanet (5): CACH syndrome (Orphanet:135), Ovarioleukodystrophy (Orphanet:99853), Cree leukoencephalopathy (Orphanet:99854), Leukodystrophy (Orphanet:68356), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145)
HPO phenotypes
11 total (11 of 11 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001259 | Coma |
| HP:0001355 | Megalencephaly |
| HP:0002344 | Progressive neurologic deterioration |
| HP:0002500 | Abnormal cerebral white matter morphology |
| HP:0002505 | Loss of ambulation |
| HP:0003593 | Infantile onset |
| HP:0006956 | Lateral ventricle dilatation |
| HP:0007082 | Dilated third ventricle |
| HP:0011463 | Childhood onset |
| HP:6000447 | Decreased CSF asialotransferrin to transferrin ratio |
GWAS associations
28 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001469_1 | Major depressive disorder | 5.000000e-06 |
| GCST004603_258 | Platelet count | 4.000000e-38 |
| GCST004603_261 | Platelet count | 4.000000e-51 |
| GCST004603_262 | Platelet count | 2.000000e-50 |
| GCST004607_262 | Plateletcrit | 9.000000e-42 |
| GCST004607_265 | Plateletcrit | 9.000000e-63 |
| GCST004607_266 | Plateletcrit | 4.000000e-65 |
| GCST004628_65 | Immature fraction of reticulocytes | 3.000000e-09 |
| GCST006269_778 | General cognitive ability | 2.000000e-09 |
| GCST010242_90 | HDL cholesterol levels | 3.000000e-08 |
| GCST010699_102 | Brain morphology (min-P) | 2.000000e-11 |
| GCST010701_37 | Cortical surface area (MOSTest) | 2.000000e-24 |
| GCST010702_18 | Subcortical volume (MOSTest) | 5.000000e-08 |
| GCST010703_130 | Brain morphology (MOSTest) | 3.000000e-08 |
| GCST90002387_84 | Immature fraction of reticulocytes | 8.000000e-15 |
| GCST90002390_302 | Mean corpuscular hemoglobin | 6.000000e-09 |
| GCST90002392_723 | Mean corpuscular volume | 1.000000e-12 |
| GCST90002400_411 | Plateletcrit | 4.000000e-13 |
| GCST90002400_412 | Plateletcrit | 4.000000e-30 |
| GCST90002400_415 | Plateletcrit | 1.000000e-85 |
| GCST90002400_416 | Plateletcrit | 1.000000e-14 |
| GCST90002400_417 | Plateletcrit | 9.000000e-109 |
| GCST90002402_662 | Platelet count | 4.000000e-13 |
| GCST90002402_663 | Platelet count | 8.000000e-29 |
| GCST90002402_666 | Platelet count | 1.000000e-67 |
| GCST90002402_667 | Platelet count | 2.000000e-13 |
| GCST90002402_668 | Platelet count | 4.000000e-82 |
| GCST90002403_558 | Red blood cell count | 5.000000e-09 |
EFO canonical traits (8, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004309 | platelet count |
| EFO:0007985 | platelet crit |
| EFO:0007986 | reticulocyte count |
| EFO:0004337 | intelligence |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004346 | neuroimaging measurement |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0004305 | erythrocyte count |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5725120 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,538 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1232461 | MOLIBRESIB | 2 | 1,538 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
3 potent at pChembl≥5 of 3 total, top 3 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.51 | IC50 | 310 | nM | MOLIBRESIB |
| 5.29 | Kd | 5145 | nM | CHEMBL3752910 |
| 5.29 | ED50 | 5145 | nM | CHEMBL3752910 |
PubChem BioAssay actives
2 with measured affinity, of 8 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide | 2178892: Inhibition of EIF2B5 (unknown origin) incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysis | ic50 | 0.3100 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149856: Binding affinity to human EIF2B5 incubated for 45 mins by Kinobead based pull down assay | kd | 5.1453 | uM |
CTD chemical–gene interactions
31 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression | 2 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| bufotalin | increases expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| bisphenol A | decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| abrine | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Resveratrol | increases expression, affects cotreatment | 1 |
| Acrolein | increases abundance, affects cotreatment, increases oxidation | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Cadmium | increases expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Doxorubicin | affects expression | 1 |
| Colforsin | increases expression | 1 |
| Haloperidol | increases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Ozone | affects cotreatment, increases oxidation, increases abundance | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Thiram | decreases expression | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, decreases expression | 1 |
| Copper Sulfate | decreases expression | 1 |
ChEMBL screening assays
7 unique, capped per target: 7 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652898 | Binding | Binding affinity to human EIF2B5 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
3 cell lines: 3 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_E4U3 | KOLF2.1J EIF2B5 9.7kbdel DEL/WT | Induced pluripotent stem cell | Male |
| CVCL_E7KS | KOLF2.1J EIF2B5 R195H SNV/SNV | Induced pluripotent stem cell | Male |
| CVCL_E7KT | KOLF2.1J EIF2B5 R195H SNV/WT | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
63 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02562170 | PHASE4 | COMPLETED | Protexa® Versus TiLoopBra® in Immediate Breast Reconstruction- A Pilot Study |
| NCT00673335 | PHASE3 | COMPLETED | Letrozole in Preventing Breast Cancer in Postmenopausal Women With a BRCA1 or BRCA2 Mutation |
| NCT00685256 | PHASE3 | COMPLETED | Standard Genetic Counseling With or Without a Decision Guide in Improving Communication Between Mothers Undergoing BRCA1/2 Testing and Their Minor-Age Children |
| NCT03162276 | PHASE3 | UNKNOWN | Trial of Inquiry Based Stress Reduction (IBSR) Program for BRCA1/2 Mutation Carriers |
| NCT00253539 | PHASE2 | COMPLETED | Arzoxifene or Tamoxifen in Preventing Breast Cancer in Premenopausal Women at High Risk for Breast Cancer |
| NCT00305695 | PHASE2 | COMPLETED | Zoledronate or Observation in Maintaining Bone Mineral Density in Patients Who Are Undergoing Surgery to Remove Both Ovaries |
| NCT00321633 | PHASE2 | COMPLETED | Carboplatin or Docetaxel in Treating Women With Metastatic Genetic Breast Cancer |
| NCT01333748 | PHASE2 | COMPLETED | Search Allelic Imbalance of Expression of BRCA Genes in Hereditary Risk of Breast and/or Ovarian Cancer |
| NCT01367639 | PHASE2 | COMPLETED | Trial of Inquiry Based Stress Reduction (IBSR) Program for BRCA1/2 Mutation Carriers |
| NCT00535119 | PHASE1 | COMPLETED | Veliparib, Carboplatin, and Paclitaxel in Treating Patients With Advanced Solid Cancer |
| NCT00892736 | PHASE1 | COMPLETED | Veliparib in Treating Patients With Malignant Solid Tumors That Do Not Respond to Previous Therapy |
| NCT05757141 | PHASE1/PHASE2 | RECRUITING | An Open-Label Exploratory Study of Fosigotifator in Participants With Vanishing White Matter Disease |
| NCT07272525 | EARLY_PHASE1 | ACTIVE_NOT_RECRUITING | Research Study for Single-Patient Treatment of Cree Leukoencephalopathy/Vanishing White Matter Disease |
| NCT02699190 | Not specified | COMPLETED | LeukoSEQ: Whole Genome Sequencing as a First-Line Diagnostic Tool for Leukodystrophies |
| NCT03047369 | Not specified | RECRUITING | The Myelin Disorders Biorepository Project |
| NCT03333200 | Not specified | RECRUITING | Longitudinal Study of Neurodegenerative Disorders |
| NCT06594016 | Not specified | NO_LONGER_AVAILABLE | Expanded Access to Fosigotifator |
| NCT07300397 | Not specified | ACTIVE_NOT_RECRUITING | Single Patient Investigational Treatment for Cree Leukoencephalopathy |
| NCT00889174 | Not specified | COMPLETED | The Nosology and Etiology of Leukodystrophies of Unknown Causes |
| NCT01793168 | Not specified | RECRUITING | Rare Disease Patient Registry & Natural History Study - Coordination of Rare Diseases at Sanford |
| NCT02843555 | Not specified | COMPLETED | Natural History of the Leukodystrophies |
| NCT03639285 | Not specified | RECRUITING | Natural History, Diagnosis, and Outcomes for Leukodystrophies |
| NCT05443906 | Not specified | RECRUITING | Home Exercise for Individuals with Neurodegenerative Disease |
| NCT03832985 | EARLY_PHASE1 | COMPLETED | Pediatric Reporting of Adult-Onset Genomic Results |
| NCT00005095 | Not specified | RECRUITING | Specimen and Data Study for Ovarian Cancer Early Detection and Prevention |
| NCT00609505 | Not specified | COMPLETED | Telemedicine vs. Face-to-Face Cancer Genetic Counseling |
| NCT01273909 | Not specified | UNKNOWN | Outcomes After Perforator Flap Reconstruction for Breast Reconstruction and/or Lymphedema Treatment |
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Related Atlas pages
- Associated diseases: leukoencephalopathy with vanishing white matter, leukoencephalopathy with vanishing white matter 1, leukoencephalopathy with vanishing white matter 5
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): leukodystrophy, leukoencephalopathy with vanishing white matter, leukoencephalopathy with vanishing white matter 1, leukoencephalopathy with vanishing white matter 5