ELAVL1
gene geneOn this page
Also known as HuRHuaMelG
Summary
ELAVL1 (ELAV like RNA binding protein 1, HGNC:3312) is a protein-coding gene on chromosome 19p13.2, encoding ELAV-like protein 1 (Q15717). RNA-binding protein that binds to the 3’-UTR region of mRNAs and increases their stability. It is a selective cancer dependency (DepMap: 15.4% of cell lines).
The protein encoded by this gene is a member of the ELAVL family of RNA-binding proteins that contain several RNA recognition motifs, and selectively bind AU-rich elements (AREs) found in the 3’ untranslated regions of mRNAs. AREs signal degradation of mRNAs as a means to regulate gene expression, thus by binding AREs, the ELAVL family of proteins play a role in stabilizing ARE-containing mRNAs. This gene has been implicated in a variety of biological processes and has been linked to a number of diseases, including cancer. It is highly expressed in many cancers, and could be potentially useful in cancer diagnosis, prognosis, and therapy.
Source: NCBI Gene 1994 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 24 total
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 15.4% of screened cell lines
- MANE Select transcript:
NM_001419
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3312 |
| Approved symbol | ELAVL1 |
| Name | ELAV like RNA binding protein 1 |
| Location | 19p13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HuR, Hua, MelG |
| Ensembl gene | ENSG00000066044 |
| Ensembl biotype | protein_coding |
| OMIM | 603466 |
| Entrez | 1994 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 16 protein_coding, 1 retained_intron
ENST00000407627, ENST00000593807, ENST00000595499, ENST00000596154, ENST00000596459, ENST00000883214, ENST00000883215, ENST00000883216, ENST00000883217, ENST00000883218, ENST00000883219, ENST00000883220, ENST00000934544, ENST00000934545, ENST00000934546, ENST00000958865, ENST00000958866
RefSeq mRNA: 1 — MANE Select: NM_001419
NM_001419
CCDS: CCDS12193
Canonical transcript exons
ENST00000407627 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000671649 | 7967565 | 7967790 |
| ENSE00000671651 | 7981083 | 7981186 |
| ENSE00000954105 | 7973725 | 7973878 |
| ENSE00001546985 | 7958573 | 7963807 |
| ENSE00003119786 | 8005495 | 8005641 |
| ENSE00003593446 | 7991644 | 7991831 |
Expression profiles
Bgee: expression breadth ubiquitous, 289 present calls, max score 98.06.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 24.0343 / max 159.1385, expressed in 1814 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 178927 | 23.7486 | 1814 |
| 178925 | 0.2857 | 119 |
Top tissues by expression
293 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| endothelial cell | CL:0000115 | 98.06 | gold quality |
| secondary oocyte | CL:0000655 | 97.88 | gold quality |
| oocyte | CL:0000023 | 96.34 | gold quality |
| pericardium | UBERON:0002407 | 95.87 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 95.81 | gold quality |
| ventricular zone | UBERON:0003053 | 95.54 | gold quality |
| corpus epididymis | UBERON:0004359 | 95.45 | gold quality |
| periodontal ligament | UBERON:0008266 | 95.42 | gold quality |
| renal medulla | UBERON:0000362 | 95.28 | gold quality |
| parotid gland | UBERON:0001831 | 95.25 | gold quality |
| colonic mucosa | UBERON:0000317 | 95.21 | gold quality |
| caput epididymis | UBERON:0004358 | 95.15 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 94.98 | gold quality |
| cauda epididymis | UBERON:0004360 | 94.96 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 94.93 | gold quality |
| urethra | UBERON:0000057 | 94.70 | gold quality |
| embryo | UBERON:0000922 | 94.66 | gold quality |
| seminal vesicle | UBERON:0000998 | 94.66 | gold quality |
| choroid plexus epithelium | UBERON:0003911 | 94.66 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 94.32 | gold quality |
| superficial temporal artery | UBERON:0001614 | 94.31 | gold quality |
| adult organism | UBERON:0007023 | 94.23 | gold quality |
| heart right ventricle | UBERON:0002080 | 94.19 | gold quality |
| cardia of stomach | UBERON:0001162 | 94.11 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 94.04 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 94.03 | gold quality |
| mammary duct | UBERON:0001765 | 94.01 | gold quality |
| body of tongue | UBERON:0011876 | 93.80 | gold quality |
| cartilage tissue | UBERON:0002418 | 93.72 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 93.71 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 9.73 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| LRP6 | Activation |
Upstream regulators (CollecTRI, top): ATF2, CDK1, MYC, NFKB, RELA, SMAD1, SP1, SSRP1, TGIF1, TP53, ZFP36
miRNA regulators (miRDB)
292 targeting ELAVL1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-10401-5P | 99.99 | 65.79 | 948 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 15.4% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- role in c-fos mRNA export (PMID:11729309)
- A 40-bp RNA element that mediates stabilization of vascular endothelial growth factor mRNA by HuR. (HuR RNA binding protein) (PMID:11834731)
- Results show that AMP-activated kinase (AMPK), an enzyme involved in responding to metabolic stresses, potently regulates the levels of cytoplasmic HuR. (PMID:11971974)
- The binding of HuR, CP1, and CP2 to AR mRNA suggests a role for each of these proteins in the post-transcriptional regulation of AR expression in cancer cells. (PMID:12011088)
- Data show that the RNA-binding protein HuR is specifically methylated on Arg(217) by coactivator-associated arginine methyltransferase 1 (CARM1). (PMID:12237300)
- Highly selective actions of HuR in antagonizing AU-rich element-mediated mRNA destabilization. (PMID:12242302)
- p21(WAF1) protein expression is mediated by stabilization of p21(WAF1) mRNA elicited via multiple 3’-UTR cis-elements. HuR binds at least one of these elements, does not appear to be a modulator of p21(WAF1) expression or growth inhibition in this system (PMID:12431987)
- AMP-activated protein kinase activation can cause premature fibroblast senescence through mechanisms that likely involve reduced HuR function. (PMID:12730239)
- The 3’ UTR of p53 was found to be a target of the RNA-binding protein HuR in a UVC-dependent manner in vitro and in vivo. HuR plays a role in binding to the p53 mRNA and enhancing its translation (PMID:12821781)
- HADHB, HuR, and CP1 are novel REN mRNA-binding proteins that target a cis-element in the 3’-UTR of REN mRNA and regulate renin production (PMID:12933794)
- HuR has a role in enhancing VHL-mediated p53 translation (PMID:14517280)
- HuR and MK2 have roles in regulating the expression of uPA and uPAR genes at the posttranscriptional level (PMID:14517288)
- Overexpression of HuR in bronchial epithelial cells significantly increases the expression and stability of eotaxin mRNA and protein. (PMID:14530362)
- HuR-regulated target mRNA expression contributes to colon cancer growth. (PMID:14562043)
- AUF1 p40, HuR, and the 3’UTR of the CTR mRNA transcript could be involved in posttranscriptional regulation of CTR mRNA expression. (PMID:14715706)
- Transportin-2 mediates nuclear import of HuR protein in vitro (PMID:14981248)
- an HuR target RNA motif and a general strategy for identifying target motifs for RNA-binding proteins (PMID:14981256)
- composition and fate (stability, translation) of HuR- and/or AUF1-containing ribonucleoprotein complexes depend on the target mRNA of interest, RNA-binding protein abundance, stress condition, and subcellular compartment (PMID:15257295)
- Overexpression of HuR in tumor tissue may be part of a regulatory pathway that controls the mRNA in breast cancer (PMID:15328200)
- Results point to importin alpha1 as a critical downstream target of AMP-activated protein kinase (AMPK) and key mediator of AMPK-triggered HuR nuclear import. (PMID:15342649)
- PGA2 stabilizes the p21 mRNA through an ERK-independent increase in cytoplasmic HuR levels and an ERK-dependent association of HuR with the p21 mRNA (PMID:15371446)
- IL-8 RNA from IL-1beta-stimulated cytoplasmic extract revealed a 20-fold greater association of transcript with the stabilizing factor HuR in breast csancer cells. (PMID:15514971)
- HuR contributes to regulating human vascular smooth muscle cell growth and homeostasis in pathologies associated with vascular smooth muscle proliferation (PMID:15824116)
- The function of HuR as a 5’-UTR-binding protein and dual-purpose translation repressor may be critical for the precise regulation of type I insulin-like growth factor receptor expression. (PMID:15914670)
- coordinated regulation of mRNA stability by HuR and AUF1 proteins contributes to the observed increase in ATF3 expression following amino acid limitation (PMID:16109718)
- HuR is a key mediator of posttranscriptional regulation and expression of the SLC11A1 gene. (PMID:16135804)
- c-Yes 3’-UTR contains at least three newly identified adenine/uridine-rich elements (AREs) which are bound specifically by ARE-binding proteins HuR and AUF1. (PMID:16289864)
- HuR-mediated mRNA stabilization, stimulated by integrin engagement and controlled at the level of HuR nuclear export, is critically involved in T cell activation (PMID:16455966)
- the HuR-CRM1 axis affects the nucleocytoplasmic translocation of CD83 mRNA under regular physiological conditions (PMID:16484227)
- The mRNAs for GM-CSF and TNF-alpha - established ARE-containing targets for HuR-mediated regulation - were upregulated by LPL-mediated lipolysis in ECAP. (PMID:16494882)
- HUR maintains cytochrome c biosynthesis. (PMID:16581801)
- role for HuR in protecting kidney epithelia from injury during ischemic stress (PMID:16788138)
- Results describe the gene expression of tristetraprolin, T-cell intracellular antigen and Hu antigen R in synovial tissues from rheumatoid arthritis and osteoarthritis patients. (PMID:16820934)
- adenosine/uridine (AU)-rich element-binding protein HuR (Hu antigen R) interacts with the beta-F1-ATPase mRNA through an AU-rich sequence located to the 3’-UTR. (PMID:16890199)
- HuR critically contributes to cyclin E1 overexpression and its growth-promoting function in breast cancer cells. (PMID:16912169)
- IL-10 sensitivity to TNF depends on the ability of IL-10 to inhibit the expression and mRNA-stabilizing protein HuR and via IL-10 mediated repression of p38 mitogen-activated protein (MAP) kinase activation (PMID:16935932)
- Activation of NADPH oxidase and MAPK-signaling pathway contribute to HuR-mediated stabilization of TLR4 mRNA induced by LPS in human aortic smooth muscle cells (HASMCs). Stimulation of HASMCs with LPS increased the cytosolic HuR level in vitro. (PMID:16990552)
- The RNA-binding protein HuR regulates the stability and translation of target mRNAs, while no HuR mutations have been found in cancer, a link between HuR and malignant transformation has been suggested in cancers of the breast, colon, lung and ovary. (PMID:17132932)
- the signal sequences in APRIL that mediate its intracellular trafficking and provide evidence that this protein ligand of HuR is an important player in the post-transcriptional regulation of CD83 expression (PMID:17178712)
- HuR-dependent regulation of RNase-L enhances its antiviral activity, demonstrating the functional significance of this regulation (PMID:17237228)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | elavl1a | ENSDARG00000038695 |
| danio_rerio | elavl1b | ENSDARG00000101744 |
| mus_musculus | Elavl1 | ENSMUSG00000040028 |
| rattus_norvegicus | Elavl1 | ENSRNOG00000001069 |
Paralogs (24): PABPC1 (ENSG00000070756), RBMS2 (ENSG00000076067), PABPC4 (ENSG00000090621), PABPC1L (ENSG00000101104), ELAVL2 (ENSG00000107105), RBM24 (ENSG00000112183), TARDBP (ENSG00000120948), HNRNPR (ENSG00000125944), RBM38 (ENSG00000132819), SYNCRIP (ENSG00000135316), SF3B4 (ENSG00000143368), RBMS3 (ENSG00000144642), PABPC3 (ENSG00000151846), RBMS1 (ENSG00000153250), RBM45 (ENSG00000155636), ELAVL4 (ENSG00000162374), PABPC5 (ENSG00000174740), PUF60 (ENSG00000179950), PABPC1L2B (ENSG00000184388), PABPC1L2A (ENSG00000186288), RBM34 (ENSG00000188739), ELAVL3 (ENSG00000196361), RBM14 (ENSG00000239306), PABPC4L (ENSG00000254535)
Protein
Protein identifiers
ELAV-like protein 1 — Q15717 (reviewed: Q15717)
Alternative names: Hu-antigen R
All UniProt accessions (3): Q15717, M0QZR9, M0R055
UniProt curated annotations — full annotation on UniProt →
Function. RNA-binding protein that binds to the 3’-UTR region of mRNAs and increases their stability. Involved in embryonic stem cell (ESC) differentiation: preferentially binds mRNAs that are not methylated by N6-methyladenosine (m6A), stabilizing them, promoting ESC differentiation. Has also been shown to be capable of binding to m6A-containing mRNAs and contributes to MYC stability by binding to m6A-containing MYC mRNAs. Binds to poly-U elements and AU-rich elements (AREs) in the 3’-UTR of target mRNAs. Binds avidly to the AU-rich element in FOS and IL3/interleukin-3 mRNAs. In the case of the FOS AU-rich element, binds to a core element of 27 nucleotides that contain AUUUA, AUUUUA, and AUUUUUA motifs. Binds preferentially to the 5’-UUUU[AG]UUU-3’ motif in vitro. With ZNF385A, binds the 3’-UTR of p53/TP53 mRNA to control their nuclear export induced by CDKN2A. Hence, may regulate p53/TP53 expression and mediate in part the CDKN2A anti-proliferative activity. May also bind with ZNF385A the CCNB1 mRNA. Increases the stability of the leptin mRNA harboring an AU-rich element (ARE) in its 3’ UTR.
Subunit / interactions. Monomer and homodimer (in vitro). Interacts with ANP32A. Interacts with ZNF385A; the interaction is indirect and mRNA-dependent and may regulate p53/TP53 expression. Identified in a mRNP complex, at least composed of DHX9, DDX3X, ELAVL1, HNRNPU, IGF2BP1, ILF3, PABPC1, PCBP2, PTBP2, STAU1, STAU2, SYNCRIP and YBX1. Interacts with AGO1 and AGO2. Interacts with IGF2BP1; the interaction is enhanced by SEPIN14P20 peptide RBPR. Interacts with IGF2BP2 and IGF2BP3. Interacts with HNRNPL. Interacts with DHX36; this interaction occurs in a RNA-dependent manner. Interacts with ILF3; this interaction occurs in a RNA-dependent manner. Interacts with PLEKHN1. Interacts with SHFL; the interaction increases in presence of RNA. Interacts with YBX1; interaction recruits ELAVL1 on C5-methylcytosine (m5C)-containing mRNAs, thereby promoting mRNA stability. Interacts with FXR1.
Subcellular location. Cytoplasm. Nucleus. Stress granule. P-body.
Tissue specificity. Ubiquitous. Detected in brain, liver, thymus and muscle.
Post-translational modifications. Phosphorylated by MAPKAPK2. Phosphorylated by PRKCD. Methylated at Arg-217 by CARM1 in macrophages in response to LPS challenge.
Domain organisation. The first RRM (RNA recognition motif) domain is essential for binding to AU-rich elements.
Similarity. Belongs to the RRM elav family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q15717-1 | 1 | yes |
| Q15717-2 | 2 |
RefSeq proteins (1): NP_001410* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000504 | RRM_dom | Domain |
| IPR002343 | Hud_Sxl_RNA | Family |
| IPR006548 | ELAD_HU_SF | Family |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Homologous_superfamily |
| IPR034996 | HuR_RRM2 | Domain |
| IPR035979 | RBD_domain_sf | Homologous_superfamily |
Pfam: PF00076
UniProt features (47 total): strand 13, modified residue 11, helix 9, mutagenesis site 3, domain 3, turn 3, initiator methionine 1, chain 1, cross-link 1, splice variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
11 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6GD3 | X-RAY DIFFRACTION | 1.35 |
| 4FXV | X-RAY DIFFRACTION | 1.9 |
| 6GC5 | X-RAY DIFFRACTION | 1.9 |
| 6GD2 | X-RAY DIFFRACTION | 1.9 |
| 3HI9 | X-RAY DIFFRACTION | 2 |
| 4ED5 | X-RAY DIFFRACTION | 2 |
| 6G2K | X-RAY DIFFRACTION | 2.01 |
| 6GD1 | X-RAY DIFFRACTION | 2.01 |
| 4EGL | X-RAY DIFFRACTION | 2.9 |
| 9W2F | ELECTRON MICROSCOPY | 3.4 |
| 5SZW | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q15717-F1 | 80.13 | 0.57 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (12): 202, 206, 217, 217, 221, 318, 191, 2, 2, 100, 158, 197
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 158 | decreases phosphorylation by prkcd. |
| 221 | decreases phosphorylation by prkcd. nearly abolishes phosphorylation by prkcd and translocation from the nucleus into th |
| 318 | decreases phosphorylation by prkcd. nearly abolishes phosphorylation by prkcd and translocation from the nucleus into th |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-450520 | HuR (ELAVL1) binds and stabilizes mRNA |
| R-HSA-9918481 | Dengue Virus-Host Interactions |
MSigDB gene sets: 362 (showing top):
ATF_B, GOBP_REGULATION_OF_AUTOPHAGY, PAX4_01, GOBP_VACUOLE_ORGANIZATION, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GOBP_REGULATION_OF_MRNA_CATABOLIC_PROCESS, TTTGTAG_MIR520D, GOBP_REGULATION_OF_SUPEROXIDE_ANION_GENERATION, GOBP_3_UTR_MEDIATED_MRNA_STABILIZATION, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, GOBP_SUPEROXIDE_METABOLIC_PROCESS, DARWICHE_SKIN_TUMOR_PROMOTER_UP, MITSIADES_RESPONSE_TO_APLIDIN_DN, DARWICHE_PAPILLOMA_RISK_LOW_UP, DARWICHE_PAPILLOMA_RISK_HIGH_UP
GO Biological Process (16): lncRNA-mediated post-transcriptional gene silencing (GO:0000512), protein import into nucleus (GO:0006606), cell population proliferation (GO:0008283), response to glucose (GO:0009749), positive regulation of autophagy (GO:0010508), positive regulation of superoxide anion generation (GO:0032930), positive regulation of translation (GO:0045727), positive regulation of autophagosome size (GO:0045772), mRNA stabilization (GO:0048255), protein homooligomerization (GO:0051260), negative regulation of miRNA-mediated gene silencing (GO:0060965), mRNA destabilization (GO:0061157), 3’-UTR-mediated mRNA stabilization (GO:0070935), regulation of stem cell population maintenance (GO:2000036), post-transcriptional gene silencing (GO:0016441), regulation of mRNA stability (GO:0043488)
GO Molecular Function (11): RNA binding (GO:0003723), double-stranded RNA binding (GO:0003725), mRNA binding (GO:0003729), mRNA 3’-UTR binding (GO:0003730), protein kinase binding (GO:0019901), miRNA binding (GO:0035198), mRNA 3’-UTR AU-rich region binding (GO:0035925), protein homodimerization activity (GO:0042803), lncRNA binding (GO:0106222), nucleic acid binding (GO:0003676), protein binding (GO:0005515)
GO Cellular Component (13): P-body (GO:0000932), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), endoplasmic reticulum (GO:0005783), cytosol (GO:0005829), cytoplasmic stress granule (GO:0010494), membrane (GO:0016020), sarcoplasm (GO:0016528), cytoplasmic vesicle (GO:0031410), postsynapse (GO:0098794), glutamatergic synapse (GO:0098978), ribonucleoprotein complex (GO:1990904)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Regulation of mRNA stability by proteins that bind AU-rich elements | 1 |
| Dengue Virus Infection | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| cytoplasm | 4 |
| RNA binding | 3 |
| regulation of mRNA stability | 2 |
| negative regulation of gene expression | 2 |
| binding | 2 |
| cytoplasmic ribonucleoprotein granule | 2 |
| intracellular membrane-bounded organelle | 2 |
| synapse | 2 |
| regulatory ncRNA-mediated post-transcriptional gene silencing | 1 |
| intracellular protein transport | 1 |
| protein localization to nucleus | 1 |
| import into nucleus | 1 |
| establishment of protein localization to organelle | 1 |
| cellular process | 1 |
| response to hexose | 1 |
| autophagy | 1 |
| positive regulation of catabolic process | 1 |
| regulation of autophagy | 1 |
| regulation of superoxide anion generation | 1 |
| superoxide anion generation | 1 |
| positive regulation of reactive oxygen species metabolic process | 1 |
| translation | 1 |
| regulation of translation | 1 |
| positive regulation of gene expression | 1 |
| positive regulation of protein metabolic process | 1 |
| regulation of autophagosome size | 1 |
| RNA stabilization | 1 |
| negative regulation of mRNA catabolic process | 1 |
| protein complex oligomerization | 1 |
| miRNA-mediated post-transcriptional gene silencing | 1 |
| regulation of miRNA-mediated gene silencing | 1 |
| negative regulation of post-transcriptional gene silencing by regulatory ncRNA | 1 |
| RNA destabilization | 1 |
| positive regulation of mRNA catabolic process | 1 |
| mRNA stabilization | 1 |
| stem cell population maintenance | 1 |
| regulation of developmental process | 1 |
| regulation of multicellular organismal process | 1 |
| post-transcriptional regulation of gene expression | 1 |
Protein interactions and networks
STRING
3760 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ELAVL1 | AGO2 | Q9UKV8 | 993 |
| ELAVL1 | UFC1 | Q9Y3C8 | 987 |
| ELAVL1 | PABPN1 | Q86U42 | 978 |
| ELAVL1 | TIA1 | P31483 | 968 |
| ELAVL1 | TIAL1 | Q01085 | 945 |
| ELAVL1 | IGF2BP1 | Q9NZI8 | 943 |
| ELAVL1 | ANP32A | P39687 | 904 |
| ELAVL1 | G3BP1 | Q13283 | 883 |
| ELAVL1 | HNRNPD | P07029 | 876 |
| ELAVL1 | IGF2BP3 | O00425 | 860 |
| ELAVL1 | HNRNPC | P07910 | 852 |
| ELAVL1 | PABPC1 | P11940 | 848 |
| ELAVL1 | ZFP36 | P26651 | 837 |
| ELAVL1 | YBX1 | P16990 | 835 |
| ELAVL1 | FMR1 | Q06787 | 833 |
IntAct
272 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PIK3CA | PIK3R2 | psi-mi:“MI:0914”(association) | 0.900 |
| HNRNPC | KPNA3 | psi-mi:“MI:0914”(association) | 0.850 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| ATXN1 | ELAVL1 | psi-mi:“MI:0915”(physical association) | 0.670 |
| IGF2BP1 | IGF2BP3 | psi-mi:“MI:0914”(association) | 0.640 |
| NCBP1 | KPNA3 | psi-mi:“MI:0914”(association) | 0.640 |
| TARDBP | ELAVL1 | psi-mi:“MI:0915”(physical association) | 0.610 |
| IGF2BP1 | SYNCRIP | psi-mi:“MI:0914”(association) | 0.580 |
| IGF2BP1 | ELAVL1 | psi-mi:“MI:0403”(colocalization) | 0.580 |
| ELAVL1 | SDCBP | psi-mi:“MI:0915”(physical association) | 0.560 |
| HNRNPD | HNRNPDL | psi-mi:“MI:0914”(association) | 0.560 |
| TUBB3 | POTEF | psi-mi:“MI:0914”(association) | 0.530 |
| DLD | PDHB | psi-mi:“MI:0914”(association) | 0.530 |
| N | HNRNPDL | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (2346): HDAC6 (Affinity Capture-Western), ELAVL1 (Affinity Capture-Western), ELAVL1 (Affinity Capture-Western), TRAF3IP2 (Affinity Capture-Western), ELAVL1 (Affinity Capture-Western), ELAVL1 (Affinity Capture-Western), SDCBP (Two-hybrid), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS), ELAVL1 (Affinity Capture-MS)
ESM2 similar proteins: A0A0R4IEW8, A4QNI8, B5DF91, O01671, O09032, O17310, O61374, O64380, O95758, O97018, P16914, P19339, P26378, P26599, P42731, P70372, P86049, Q12926, Q14576, Q15717, Q1JQ73, Q24668, Q28FX0, Q28GD4, Q29099, Q5R9H4, Q5R9Z6, Q5U259, Q5YD48, Q60899, Q60900, Q61701, Q6DEY7, Q6GLB5, Q6GR16, Q6YZW2, Q7SZT7, Q8CH84, Q8GZ26, Q8LFS6
Diamond homologs: A0A0R4IEW8, A4QNI8, A8NS61, A8WLV5, B3M3R5, B3NGA1, B4HUE4, B4IX08, B4KX02, B4LFQ9, B4MM23, B4PIS2, B4QRJ0, B5DF91, B8BCZ8, O01671, O04425, O09032, O17310, O61374, O75821, O89086, O97018, P16914, P19339, P19683, P23241, P26378, P28644, P29558, P49310, P60824, P60825, P60826, P70372, P98179, Q04836, Q12926, Q14011, Q14498
SIGNOR signaling
12 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRKCD | up-regulates | ELAVL1 | phosphorylation |
| MAPKAPK2 | up-regulates | ELAVL1 | phosphorylation |
| MAPK14 | up-regulates | ELAVL1 | phosphorylation |
| ELAVL1 | “up-regulates quantity” | ADAM10 | “post transcriptional regulation” |
| CHUK | “down-regulates quantity by destabilization” | ELAVL1 | phosphorylation |
| CHEK2 | “up-regulates activity” | ELAVL1 | phosphorylation |
| CHEK2 | “down-regulates activity” | ELAVL1 | phosphorylation |
| MAPK15 | “down-regulates activity” | ELAVL1 | phosphorylation |
| CDK1 | “down-regulates activity” | ELAVL1 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 170 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| mRNA Polyadenylation | 18 | 13.1× | 1e-12 |
| Processing of Capped Intron-Containing Pre-mRNA | 15 | 10.2× | 4e-09 |
| mRNA Splicing - Major Pathway | 18 | 8.1× | 2e-09 |
| mRNA Splicing | 8 | 7.3× | 2e-03 |
| Macroautophagy | 7 | 6.7× | 6e-03 |
| Dengue Virus-Host Interactions | 15 | 5.7× | 1e-05 |
| Metabolism of RNA | 11 | 3.8× | 9e-03 |
| Viral Infection Pathways | 14 | 3.6× | 3e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of cytoplasmic translation | 5 | 32.4× | 5e-05 |
| alternative mRNA splicing, via spliceosome | 5 | 22.0× | 3e-04 |
| translational initiation | 6 | 14.1× | 4e-04 |
| RNA processing | 9 | 12.9× | 8e-06 |
| regulation of alternative mRNA splicing, via spliceosome | 8 | 12.8× | 4e-05 |
| mitophagy | 6 | 12.5× | 8e-04 |
| mRNA stabilization | 5 | 12.0× | 4e-03 |
| intrinsic apoptotic signaling pathway | 5 | 11.7× | 4e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
24 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 13 |
| Likely benign | 0 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1475 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:7963804:GAACC:G | acceptor_loss | 1.0000 |
| 19:7963805:AACC:A | acceptor_loss | 1.0000 |
| 19:7963806:ACCT:A | acceptor_loss | 1.0000 |
| 19:7963808:C:A | acceptor_loss | 1.0000 |
| 19:7963809:T:A | acceptor_loss | 1.0000 |
| 19:7973719:TGGTA:T | donor_loss | 1.0000 |
| 19:7973720:GGTAC:G | donor_loss | 1.0000 |
| 19:7973721:GTAC:G | donor_loss | 1.0000 |
| 19:7973722:TA:T | donor_loss | 1.0000 |
| 19:7973723:A:T | donor_loss | 1.0000 |
| 19:7973724:CCTGT:C | donor_loss | 1.0000 |
| 19:7981081:A:AT | donor_loss | 1.0000 |
| 19:7981183:TGTCC:T | acceptor_gain | 1.0000 |
| 19:7981184:GTCC:G | acceptor_gain | 1.0000 |
| 19:7981185:TCCT:T | acceptor_gain | 1.0000 |
| 19:7981186:CCTG:C | acceptor_gain | 1.0000 |
| 19:7981187:C:A | acceptor_loss | 1.0000 |
| 19:7981188:T:C | acceptor_loss | 1.0000 |
| 19:7981189:G:C | acceptor_gain | 1.0000 |
| 19:7991682:T:TA | donor_gain | 1.0000 |
| 19:7991714:AT:A | donor_gain | 1.0000 |
| 19:7991827:AAAAT:A | acceptor_gain | 1.0000 |
| 19:7991828:AAAT:A | acceptor_gain | 1.0000 |
| 19:7991829:AAT:A | acceptor_gain | 1.0000 |
| 19:7991830:AT:A | acceptor_gain | 1.0000 |
| 19:7991830:ATCT:A | acceptor_loss | 1.0000 |
| 19:7991831:TCT:T | acceptor_loss | 1.0000 |
| 19:7991832:C:CC | acceptor_gain | 1.0000 |
| 19:7991832:C:CG | acceptor_loss | 1.0000 |
| 19:7963808:C:CC | acceptor_gain | 0.9900 |
AlphaMissense
2165 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:7963504:T:A | K320N | 1.000 |
| 19:7963504:T:G | K320N | 1.000 |
| 19:7963505:T:A | K320I | 1.000 |
| 19:7963506:T:C | K320E | 1.000 |
| 19:7963507:G:C | F319L | 1.000 |
| 19:7963507:G:T | F319L | 1.000 |
| 19:7963508:A:G | F319S | 1.000 |
| 19:7963509:A:G | F319L | 1.000 |
| 19:7963512:A:G | S318P | 1.000 |
| 19:7963514:A:T | V317D | 1.000 |
| 19:7963520:A:G | L315S | 1.000 |
| 19:7963550:A:G | L305P | 1.000 |
| 19:7963562:G:T | A301D | 1.000 |
| 19:7963563:C:G | A301P | 1.000 |
| 19:7963569:C:G | A299P | 1.000 |
| 19:7963571:G:T | A298D | 1.000 |
| 19:7963572:C:G | A298P | 1.000 |
| 19:7963588:C:A | M292I | 1.000 |
| 19:7963588:C:G | M292I | 1.000 |
| 19:7963588:C:T | M292I | 1.000 |
| 19:7963595:A:T | V290E | 1.000 |
| 19:7963596:C:T | V290M | 1.000 |
| 19:7963597:A:C | F289L | 1.000 |
| 19:7963597:A:T | F289L | 1.000 |
| 19:7963598:A:C | F289C | 1.000 |
| 19:7963598:A:G | F289S | 1.000 |
| 19:7963599:A:C | F289V | 1.000 |
| 19:7963599:A:G | F289L | 1.000 |
| 19:7963599:A:T | F289I | 1.000 |
| 19:7963601:C:A | G288V | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000036976 (19:7994702 C>T), RS1000041193 (19:7958792 T>C), RS1000089472 (19:7996163 A>C,G), RS1000112037 (19:7983860 G>A), RS1000213826 (19:8000873 G>A), RS1000268263 (19:7988591 G>A), RS1000290086 (19:7958711 C>T), RS1000291745 (19:8005709 C>A,G,T), RS1000315850 (19:8000449 C>T), RS1000320999 (19:7988407 C>T), RS1000323938 (19:8005827 C>A,T), RS1000345155 (19:7959181 G>A,T), RS1000380716 (19:7989216 C>T), RS1000398803 (19:7983538 G>A), RS1000469084 (19:7964668 C>A)
Disease associations
OMIM: gene MIM:603466 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1250379 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 74,559 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL50 | QUERCETIN | 3 | 74,559 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
12 measured of 12 human assays (12 total across all organisms); most potent 12 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| cid_5992379 | IC50 | 2700 nM |
| 2-keto-3-pyridazin-3-yl-propionic acid ethyl ester | IC50 | 4600 nM |
| cid_3034178 | IC50 | 14700 nM |
| cid_247668 | IC50 | 16700 nM |
| cid_374010 | IC50 | 17400 nM |
| cid_83851 | IC50 | 21700 nM |
| 3,5-bis(2,5-dioxo-1-pyrrolyl)benzoic acid | IC50 | 26900 nM |
| 5-Amino-2-p-toluidinobenzenesulfonic acid | IC50 | 41000 nM |
| 6-[(8-chloro-4-hydroxy-3-{[4-hydroxy-3-(3-methylbut-2-en-1-yl)benzene]amido}-2-oxo-2H-chromen-7-yl)oxy]-5-hydroxy-3-methoxy-2,2-dimethyloxan-4-yl 5-methyl-1H-pyrrole-2-carboxylate | IC50 | 41900 nM |
| 6-penta-1,3-diynyl-2-pyranone | IC50 | 44400 nM |
| MLS002707303 | IC50 | 69600 nM |
| 1-hydroxy-N-(3-nitrophenyl)-2-naphthalenecarboxamide | IC50 | 97400 nM |
ChEMBL bioactivities
47 potent at pChembl≥5 of 58 total, top 45 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
46 with measured affinity, of 126 total; 21 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 6-(4,5-dihydroxy-2-methylnaphthalen-1-yl)-4-hydroxypyran-2-one | 507005: Inhibition of recombinant full length HuR assessed as protein dimerization with TMR-labeled A/U-rich element of COX2 by confocal fluctuation spectroscopy | kd | <0.0001 | uM |
| 5,8-dihydroxy-3-methyl-9H-benzo[f][2]benzofuran-4-one | 507002: Inhibition of recombinant HuR RRM1/RRM2 domain assessed as protein dimerization with TMR-labeled A/U-rich element of TNFalpha by confocal fluctuation spectroscopy | kd | 0.0001 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148314: Binding affinity to human ELAVL1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0107 | uM |
| 1-(benzenesulfonyl)-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0128 | uM |
| 1-(benzenesulfonyl)-7-(4-methoxyphenyl)sulfanyl-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0150 | uM |
| 1-(benzenesulfonyl)-7-(4-methoxyphenyl)-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0410 | uM |
| 1-(4-fluorophenyl)sulfonyl-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0480 | uM |
| (1R)-1,6-dimethyl-1,2-dihydronaphtho[1,2-g][1]benzofuran-10,11-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0500 | uM |
| 1-(benzenesulfonyl)-7-(3-methoxyphenyl)-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0550 | uM |
| 1-methylsulfonyl-3-phenylindole-4,5-dione | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0560 | uM |
| N-[4-(4,5-dioxo-3-phenylindol-1-yl)sulfonylphenyl]acetamide | 1489663: Binding affinity to human full length recombinant His-tagged HuR expressed in Escherichia coli Rosetta DH5alpha assessed as inhibition of interaction with single-strand Bi-AU RNA probe by AlphaScreen assay | ki | 0.0810 | uM |
| 4,6,9-trihydroxy-8-methyl-3,4-dihydro-2H-anthracen-1-one | 507008: Binding affinity to recombinant full length HuR assessed as protein dimerization with TMR-labeled A/U-rich element of IL-2 by confocal fluctuation spectroscopy | kd | 0.0850 | uM |
| 5,7-dimethoxy-8-[1-(4-methoxyphenyl)-3-oxo-3-pyrrolidin-1-ylpropyl]-4-phenylchromen-2-one | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 0.3500 | uM |
| 2-amino-6-[2-(3,4-dihydroxyphenyl)-2-oxoethyl]sulfanyl-4-[4-(phenoxymethyl)phenyl]pyridine-3,5-dicarbonitrile | 1450466: Inhibition of ELAV1 (unknown origin)-ARE TNFalpha complex formation after 20 mins by liquid scintillation counting method | ic50 | 0.3800 | uM |
| 3-(5,7-dimethoxy-2-oxo-4-phenylchromen-8-yl)-N,N-diethyl-3-(4-methoxyphenyl)propanamide | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 0.5700 | uM |
| 3-(5,7-dimethoxy-2-oxo-4-phenylchromen-8-yl)-N,N-diethyl-3-(3,4,5-trimethoxyphenyl)propanamide | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 0.5900 | uM |
| 5,7-dimethoxy-8-[1-(4-methoxyphenyl)-3-morpholin-4-yl-3-oxopropyl]-4-phenylchromen-2-one | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 0.8000 | uM |
| 8-[1-(1,3-benzodioxol-5-yl)-3-oxo-3-pyrrolidin-1-ylpropyl]-5,7-dimethoxy-4-phenylchromen-2-one | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 1.0500 | uM |
| 5,7-dimethoxy-8-[3-oxo-3-pyrrolidin-1-yl-1-(3,4,5-trimethoxyphenyl)propyl]-4-phenylchromen-2-one | 1450469: Inhibition of ELAV1 (unknown origin)-ARE sequence of Mushashi1 transcript complex formation after 2 hrs by fluorescence polarization assay | ki | 1.1000 | uM |
| Quercetin | 1450466: Inhibition of ELAV1 (unknown origin)-ARE TNFalpha complex formation after 20 mins by liquid scintillation counting method | ic50 | 1.4000 | uM |
| 2-[[6-amino-3,5-dicyano-4-(4-methoxyphenyl)-2-pyridinyl]sulfanyl]-N-(4-chlorophenyl)acetamide | 1450466: Inhibition of ELAV1 (unknown origin)-ARE TNFalpha complex formation after 20 mins by liquid scintillation counting method | ic50 | 6.2100 | uM |
CTD chemical–gene interactions
84 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases degradation, decreases expression, increases expression, affects binding, increases phosphorylation (+4 more) | 6 |
| trichostatin A | affects cotreatment, affects localization, decreases expression | 4 |
| Valproic Acid | affects expression, decreases expression, increases expression | 4 |
| deoxynivalenol | affects cotreatment, decreases degradation, affects localization, increases activity, increases reaction (+5 more) | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression, decreases expression | 2 |
| Antimycin A | decreases reaction, decreases expression, decreases localization, affects binding | 2 |
| Tretinoin | decreases expression | 2 |
| 1-Methyl-4-phenylpyridinium | increases expression, affects reaction, increases cleavage, increases secretion, increases reaction | 2 |
| GLX351322 | decreases expression, decreases reaction | 1 |
| quinone | decreases expression | 1 |
| 2,4,6-tribromophenol | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| 4-biphenylamine | affects expression, affects reaction, affects lipidation | 1 |
| decabromobiphenyl ether | increases expression | 1 |
| 2-butenal | decreases expression | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| 3-methyladenine | decreases expression, decreases reaction, decreases stability | 1 |
| butylidenephthalide | decreases expression | 1 |
| AICA ribonucleotide | affects binding, decreases reaction, decreases localization | 1 |
| hydroquinone | decreases expression, decreases reaction, increases degradation, increases reaction | 1 |
| cyclic 3’,5’-uridine monophosphate | affects binding | 1 |
| epigallocatechin gallate | increases expression | 1 |
| arsenic trichloride | increases reaction, affects binding | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 1,2-bis(2-aminophenoxy)ethane N,N,N’,N’-tetraacetic acid acetoxymethyl ester | decreases reaction, increases phosphorylation | 1 |
| benzyloxycarbonylleucyl-leucyl-leucine aldehyde | increases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| Go 6976 | decreases reaction, increases phosphorylation | 1 |
| 4-(4-fluorophenyl)-2-(4-hydroxyphenyl)-5-(4-pyridyl)imidazole | decreases stability, decreases expression, decreases reaction | 1 |
| deguelin | decreases expression | 1 |
ChEMBL screening assays
54 unique, capped per target: 53 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1243881 | Binding | Inhibition of recombinant HuR RRM1/RRM2 domain assessed as protein interaction with TMR-labeled A/U-rich element of IL-2 by confocal fluctuation spectroscopy | Identification and mechanistic characterization of low-molecular-weight inhibitors for HuR. — Nat Chem Biol |
| CHEMBL3562061 | Functional | PubChem BioAssay. Identify HuR specific inhibitors. (Class of assay: confirmatory) | PubChem BioAssay data set |
Cellosaurus cell lines
7 cell lines: 7 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B0YT | Abcam SW480 ELAVL1 KO | Cancer cell line | Male |
| CVCL_D7PA | Ubigene A-549 ELAVL1 KO | Cancer cell line | Male |
| CVCL_KT68 | HeLa SilenciX HuR | Cancer cell line | Female |
| CVCL_SL83 | HAP1 ELAVL1 (-) 1 | Cancer cell line | Male |
| CVCL_SL84 | HAP1 ELAVL1 (-) 2 | Cancer cell line | Male |
| CVCL_SL85 | HAP1 ELAVL1 (-) 3 | Cancer cell line | Male |
| CVCL_SL86 | HAP1 ELAVL1 (-) 4 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.