ELP4-AS1

Summary

ELP4-AS1 (ELP4 antisense RNA 1, HGNC:58222) is a long non-coding RNA gene on chromosome 11p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58222
Approved symbol	ELP4-AS1
Name	ELP4 antisense RNA 1
Location	11p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228061
Ensembl biotype	lncRNA
Entrez	139355222
RNAcentral	URS0000DBAF18 — lncRNA, 3945 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000429821, ENST00000454509, ENST00000648611, ENST00000653409, ENST00000666717, ENST00000670707, ENST00000826485, ENST00000826486, ENST00000826487

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429821 — 4 exons

Exon	Start	End
ENSE00001599430	31767231	31767382
ENSE00001770114	31767635	31767953
ENSE00001776685	31637328	31637342
ENSE00001801805	31645666	31645756

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 89.79.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	89.79	gold quality
ganglionic eminence	UBERON:0004023	81.99	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.39	gold quality
colonic epithelium	UBERON:0000397	76.81	gold quality
corpus callosum	UBERON:0002336	72.78	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.45	gold quality
calcaneal tendon	UBERON:0003701	66.68	gold quality
skeletal muscle tissue	UBERON:0001134	66.58	gold quality
bone marrow cell	CL:0002092	66.40	silver quality
muscle tissue	UBERON:0002385	64.57	gold quality
cerebellar cortex	UBERON:0002129	63.58	gold quality
bone marrow	UBERON:0002371	63.55	silver quality
cerebellum	UBERON:0002037	63.50	gold quality
cerebellar hemisphere	UBERON:0002245	63.48	gold quality
sural nerve	UBERON:0015488	63.44	silver quality
right hemisphere of cerebellum	UBERON:0014890	62.81	gold quality
adrenal tissue	UBERON:0018303	62.42	gold quality
tonsil	UBERON:0002372	61.99	gold quality
cortical plate	UBERON:0005343	60.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.13	gold quality
liver	UBERON:0002107	59.02	gold quality
putamen	UBERON:0001874	58.16	gold quality
prefrontal cortex	UBERON:0000451	58.13	gold quality
monocyte	CL:0000576	57.77	gold quality
blood	UBERON:0000178	57.46	gold quality
Ammon’s horn	UBERON:0001954	57.24	gold quality
urinary bladder	UBERON:0001255	56.23	gold quality
frontal cortex	UBERON:0001870	56.18	gold quality
temporal lobe	UBERON:0001871	55.95	gold quality
kidney	UBERON:0002113	55.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	5.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.