ENTPD1
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Also known as NTPDase-1ATPDaseSPG64
Summary
ENTPD1 (ectonucleoside triphosphate diphosphohydrolase 1, HGNC:3363) is a protein-coding gene on chromosome 10q24.1, encoding Ectonucleoside triphosphate diphosphohydrolase 1 (P49961). Catalyzes the hydrolysis of nucleoside triphosphates (NTPs) and diphosphates (NDPs).
The protein encoded by this gene is a plasma membrane protein that hydrolyzes extracellular ATP and ADP to AMP. Inhibition of this protein’s activity may confer anticancer benefits. Several transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 953 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complex hereditary spastic paraplegia (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 13
- Clinical variants (ClinVar): 251 total — 8 pathogenic, 6 likely-pathogenic
- Phenotypes (HPO): 16
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001776
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3363 |
| Approved symbol | ENTPD1 |
| Name | ectonucleoside triphosphate diphosphohydrolase 1 |
| Location | 10q24.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | NTPDase-1, ATPDase, SPG64 |
| Ensembl gene | ENSG00000138185 |
| Ensembl biotype | protein_coding |
| OMIM | 601752 |
| Entrez | 953 |
Gene structure
Transcript identifiers
Ensembl transcripts: 21 — 12 protein_coding, 3 retained_intron, 3 protein_coding_CDS_not_defined, 3 nonsense_mediated_decay
ENST00000371205, ENST00000371206, ENST00000371207, ENST00000422161, ENST00000453258, ENST00000461927, ENST00000483213, ENST00000490659, ENST00000494070, ENST00000543964, ENST00000635076, ENST00000635677, ENST00000639992, ENST00000859523, ENST00000859524, ENST00000859525, ENST00000859526, ENST00000859527, ENST00000953039, ENST00000953040, ENST00000953041
RefSeq mRNA: 9 — MANE Select: NM_001776
NM_001098175, NM_001164178, NM_001164179, NM_001164181, NM_001164182, NM_001164183, NM_001312654, NM_001320916, NM_001776
CCDS: CCDS41554, CCDS53556, CCDS53557, CCDS7444
Canonical transcript exons
ENST00000371205 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001454616 | 95756163 | 95756255 |
| ENSE00001811430 | 95866177 | 95877266 |
| ENSE00003533158 | 95842344 | 95842494 |
| ENSE00003546647 | 95844476 | 95844635 |
| ENSE00003651981 | 95823237 | 95823364 |
| ENSE00003679002 | 95839691 | 95839808 |
| ENSE00003803333 | 95847446 | 95847706 |
| ENSE00003804982 | 95845357 | 95845596 |
| ENSE00003809905 | 95864724 | 95864861 |
| ENSE00003810859 | 95860469 | 95860582 |
Expression profiles
Bgee: expression breadth ubiquitous, 274 present calls, max score 96.37.
FANTOM5 (CAGE): breadth broad, TPM avg 10.1353 / max 621.2268, expressed in 683 samples.
FANTOM5 promoters (8 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 106364 | 6.3649 | 554 |
| 106362 | 1.3312 | 282 |
| 106363 | 0.8787 | 354 |
| 106360 | 0.8524 | 337 |
| 106361 | 0.2620 | 127 |
| 106365 | 0.2590 | 95 |
| 106358 | 0.1228 | 33 |
| 106366 | 0.0643 | 29 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| saphenous vein | UBERON:0007318 | 96.37 | gold quality |
| monocyte | CL:0000576 | 95.63 | gold quality |
| mononuclear cell | CL:0000842 | 95.33 | gold quality |
| blood vessel layer | UBERON:0004797 | 95.03 | gold quality |
| leukocyte | CL:0000738 | 94.93 | gold quality |
| popliteal artery | UBERON:0002250 | 94.72 | gold quality |
| tibial artery | UBERON:0007610 | 94.70 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 94.49 | gold quality |
| gall bladder | UBERON:0002110 | 93.89 | gold quality |
| right coronary artery | UBERON:0001625 | 93.74 | gold quality |
| urethra | UBERON:0000057 | 93.16 | gold quality |
| blood | UBERON:0000178 | 92.84 | gold quality |
| vermiform appendix | UBERON:0001154 | 92.60 | gold quality |
| bone marrow cell | CL:0002092 | 92.43 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 92.42 | gold quality |
| visceral pleura | UBERON:0002401 | 92.24 | gold quality |
| left coronary artery | UBERON:0001626 | 91.74 | gold quality |
| bone marrow | UBERON:0002371 | 91.72 | gold quality |
| coronary artery | UBERON:0001621 | 91.67 | gold quality |
| aorta | UBERON:0000947 | 91.50 | gold quality |
| superficial temporal artery | UBERON:0001614 | 91.34 | gold quality |
| caecum | UBERON:0001153 | 91.02 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 90.96 | gold quality |
| periodontal ligament | UBERON:0008266 | 90.57 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 90.50 | gold quality |
| myometrium | UBERON:0001296 | 90.32 | gold quality |
| urinary bladder | UBERON:0001255 | 90.28 | gold quality |
| skin of hip | UBERON:0001554 | 90.07 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 89.60 | gold quality |
| lymph node | UBERON:0000029 | 89.04 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-88 | yes | 17.41 |
| E-HCAD-25 | yes | 15.96 |
| E-ANND-3 | yes | 12.90 |
| E-CURD-112 | no | 3.56 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ATF2, CREB1, GFI1, STAT3
miRNA regulators (miRDB)
410 targeting ENTPD1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4534 | 99.99 | 66.58 | 1907 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-4645-5P | 99.98 | 65.81 | 1284 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
Literature-anchored findings (GeneRIF, showing 40)
- NTPDase/E-ATPDase activity was demonstrated on cryosections of human pancreas.Significantly diminished activity of NTPDase1 in the tissues surrounding the ducts was detected (PMID:11897808)
- Thrombin-induced deactivation of CD39 in endothelial cells is reversed by HMG-CoA reductase inhibitors and preservation of ATP and ADP metabolism. (PMID:12067895)
- Roles of Asp54 and Asp213 in Ca2+ utilization by soluble enzymes (PMID:12234494)
- Depolarization causes the endothelial production of superoxide, which inhibits the activity of endothelial NTPDase-1 and enhances platelet aggregation. (PMID:12482826)
- Correlation was observed between ATP hydrolysis and triglycerides in patients with chronic heart disease, suggesting a relationship between ATP diphosphohydrolase and thrombogenesis. (PMID:12623446)
- hCD39 transgenic mice exhibit impaired platelet aggregation, prolonged bleeding times, and resistance to systemic thromboembolism (PMID:15146241)
- capacity of NTPDase1 to hydrolyze both nucleoside triphosphates and diphosphates. (PMID:15496502)
- The NTPDase1/CD39 is the dominant ecto-nucleotidase of vascular and placental trophoblastic tissues and appears to modulate the functional expression of type-2 purinergic (P2) G-protein coupled receptors (GPCRs). (PMID:15590415)
- After exercise, all subjects showed a significant reduction of CD39 expression in platelet and an increase of CD39 expression in B lymphocytes. (PMID:15772061)
- there is a functional link between the localization of CD39 in cholesterol-rich domains of the membrane and its role in thromboregulation (PMID:15890655)
- leukocyte NTPDase1 provides means of dephosphorylating ATP which enables ATP-induced platelet aggregation via conversion to ADP, but also converts ADP to AMP and adenosine. (PMID:16011960)
- Changes in the expression of NTPDase1 and caveolins seem to be independent of human cardiovascular disease (PMID:16028070)
- CD39 associations with RanBPM have the potential to regulate NTPDase catalytic activity. This intermolecular interaction may have important implications for the regulation of extracellular nucleotide-mediated signalling. (PMID:16478441)
- Distinct roles for CD39 and P2-purinergic signaling in both tissue remodeling and fibrogenesis with respect to human pancreatic diseases. (PMID:16920697)
- Composition of the active site of wild-type CD39 appears optimized for ADPase function in the context of the transmembrane domains. (PMID:17374358)
- Patients with the remitting/relapsing form of multiple sclerosis have strikingly reduced numbers of CD39(+) Treg cells in the blood (PMID:17449799)
- Data show that host-derived CD39 is acquired by both laboratory-adapted and clinical variants of HIV-1 produced in cellular reservoirs of the virus. (PMID:17560607)
- the effect of overexpressed CD39/NTPDase-1 in injured aorta (PMID:18485080)
- Prolonged exposure to endogenous ATP related to decreased NTPDase1/CD39 activity leads to P2-purinoceptor desensitization in impotent men (PMID:18600538)
- E-NTPDase1 plays an important role in regulating neutrophil chemotaxis by facilitating the hydrolysis of extracellular ATP (PMID:18713747)
- a novel Sp1-dependent regulatory pathway for CD39 indicate the likelihood that CD39 is central to protective responses to hypoxia/ischemia (PMID:18812468)
- stable oxidants present in diluted aqueous cigarette smoke extract (aCSE) are responsible for platelet NTPDase inhibition induced by aCSE. (PMID:18979366)
- Studies in human cell lines and in vivo mouse data support a potential role for ENTPD1 genetic variation in susceptibility to type 2 diabetes. (PMID:19095759)
- Isolation of functional human regulatory T cells (Treg) from the peripheral blood based on the CD39 expression. (PMID:19450601)
- report that the ectoenzyme CD39/NTPDase1 helps to delineate a novel population of human “inducer” CD4+ T cells (Tind) that significantly increases the proliferation and cytokine production of responder T cells in a dose-dependent manner. (PMID:19877008)
- The NTPDase activity and expression were increased in lymphocytes from RRMS patients when compared with the control group. (PMID:19914228)
- Cystic fibrosis epithelia exhibit >50% lower NTPDase1 activity, protein, and mRNA levels than normal epithelia, whereas these parameters are threefold higher for NTPDase3. (PMID:20190036)
- CD39(+);Fxop3(+);Treg subset may play an essential role in immune regulation of Treg, and CD39 can be used as a surface marker to identify the functional Treg cells. (PMID:20487644)
- Increased expression of CD39 is restricted to the CD4-expressing T cell population from the inflamed joint in juvenile idiopathic arthritis. (PMID:20498355)
- reduced expression by CD8-positive Treg populations from primary biliary cirrhosis patients (PMID:20638239)
- CD39 is expressed at high levels in clinical inflammatory bowel disease tissues. (PMID:20936356)
- We conclude that the ectonucleotidase CD39 is a useful and dynamic lymphocytes surface marker that can be used to identify different peripheral blood T cell-populations to allow tracking of these in health and disease, as in renal allograft rejection. (PMID:20977632)
- In type 2 diabetes (T2D) patients, the percentages of CD39+ cells and CD39+CD19+ cells were significantly associated with HbA1c and fasting plasma glucose levels. Enhanced CD39 enzyme activity and low serum levels of IL-17 were detected in T2D patients. (PMID:21492831)
- the ectonucleotidases CD39 and CD73 and ADORA2A appear as possible targets for novel treatments in ovarian cancer (PMID:21638125)
- CD39(+)Tregs inhibit generation and differentiation of Th17 cells via a latency-associated peptide-dependent mechanism in malignant pleural effusion. (PMID:21663645)
- Extracellular nucleotides, whose levels are tightly controlled by endogenously expressed NTPDase1, induce interleukin (IL)-8 production by human neutrophils. (PMID:21670316)
- Exosomes from diverse cancer cell types exhibit potent ATP and 5’AMP phosphohydrolytic activity, partly attributed to exosomally expressed CD39 and CD73, which contribute to extracellular adenosine production. (PMID:21677139)
- Data indicate that CD39-expressing T(regs) comprised 37+/-13% of the T(reg) population in healthy controls and 36+/-21% in lupus subjects. (PMID:21763644)
- transgenic ENTPDase-1 expression preferentially conveys myocardial protection from ischemic injury via adenosine A(2B) receptor engagement (PMID:21939667)
- Data show that the alterations in the CD39/CD73 adenosinergic machinery and loss of function in ADA-deficient Tregs provide insights into a predisposition to autoimmunity and the underlying mechanisms causing defective peripheral tolerance in ADA-SCID. (PMID:22184407)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | entpd1 | ENSDARG00000045066 |
| mus_musculus | Entpd1 | ENSMUSG00000048120 |
| rattus_norvegicus | Entpd1 | ENSRNOG00000014574 |
Paralogs (7): ENTPD2 (ENSG00000054179), ENTPD3 (ENSG00000168032), ENTPD5 (ENSG00000187097), ENTPD8 (ENSG00000188833), ENTPD4 (ENSG00000197217), ENTPD6 (ENSG00000197586), ENTPD7 (ENSG00000198018)
Protein
Protein identifiers
Ectonucleoside triphosphate diphosphohydrolase 1 — P49961 (reviewed: P49961)
Alternative names: ATP diphosphohydrolase, Ecto-ATP diphosphohydrolase 1, Ecto-apyrase, Lymphoid cell activation antigen, Nucleoside triphosphate diphosphohydrolase 1
All UniProt accessions (4): P49961, A0A0U1RQZ5, A0A0U1RR44, A0A1W2PQK8
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the hydrolysis of nucleoside triphosphates (NTPs) and diphosphates (NDPs). The enzyme sequentially removes phosphate groups in two successive steps, converting NTPs to nucleoside monophosphates (NMPs) via NDP intermediates. This activity contributes to the regulation of extracellular levels of nucleotides. By hydrolyzing proinflammatory ATP and platelet-activating ADP to AMP, it blocks platelet aggregation and supports blood flow.
Subunit / interactions. Homodimer; disulfide-linked.
Subcellular location. Membrane. Caveola.
Tissue specificity. Expressed primarily on activated lymphoid cells. Also expressed in endothelial tissues. Highly expressed in placenta, lung, skeletal muscle, kidney.
Post-translational modifications. N-glycosylated. The N-terminus is blocked. Palmitoylated on Cys-13; which is required for caveola targeting.
Disease relevance. Spastic paraplegia 64, autosomal recessive (SPG64) [MIM:615683] A form of spastic paraplegia, a neurodegenerative disorder characterized by a slow, gradual, progressive weakness and spasticity of the lower limbs. Rate of progression and the severity of symptoms are quite variable. Initial symptoms may include difficulty with balance, weakness and stiffness in the legs, muscle spasms, and dragging the toes when walking. In some forms of the disorder, bladder symptoms (such as incontinence) may appear, or the weakness and stiffness may spread to other parts of the body. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. The ADP and ATP diphosphohydrolase activities are decreased by half by sodium azide. The ADP diphosphohydrolase activity is inhibited by EDTA. The ATP and ADP diphosphohydrolase activities are inhibited by sodium fluoride. The ADP diphosphohydrolase activity is inhibited to a less extend by adenosine 5’-[alpha,beta-methylene]triphosphate and of about 80% by AMP-PNP.
Similarity. Belongs to the GDA1/CD39 NTPase family.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P49961-1 | 1, Vascular | yes |
| P49961-2 | 2, Placental I | |
| P49961-3 | 3, Placental II | |
| P49961-4 | 4 | |
| P49961-5 | 5 | |
| P49961-6 | 6 |
RefSeq proteins (9): NP_001091645, NP_001157650, NP_001157651, NP_001157653, NP_001157654, NP_001157655, NP_001299583, NP_001307845, NP_001767* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000407 | GDA1_CD39_NTPase | Family |
Pfam: PF01150
Enzyme classification (BRENDA):
- EC 3.6.1.5 — apyrase (BRENDA: 66 organisms, 384 substrates, 230 inhibitors, 158 Km, 64 kcat entries)
Substrate kinetics (BRENDA)
29 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0025–8.7 | 44 |
| ADP | 0.0025–5.3 | 42 |
| UDP | 0.0113–0.555 | 7 |
| GDP | 0.0114–0.357 | 6 |
| UTP | 0.01–0.207 | 5 |
| N-[5-[4-CARBOXY-3-(3-OXO-9,9A-DIHYDRO-3H-XANTHEN | 0.0133–0.105 | 4 |
| DATP | 0.018–0.89 | 3 |
| DCTP | 0.029–0.276 | 3 |
| DGTP | 0.028–0.16 | 3 |
| IDP | 0.0105–0.622 | 3 |
| 1,N6-ETHENO-ADP | 0.073–0.114 | 2 |
| 1,N6-ETHENO-ATP | 0.024–0.031 | 2 |
| 2’(3’)-O-(2,4,6-TRINITROPHENYL)ADENOSINE 5’-DIPH | 0.009–0.019 | 2 |
| 2’(3’)-O-(2,4,6-TRINITROPHENYL)ADENOSINE 5’-TRIP | 0.008–0.018 | 2 |
| 3’(2’)-O-(METHYLANTHRANOYL)ADENOSINE 5’-DIPHOSPH | 0.014–0.017 | 2 |
Catalyzed reactions (Rhea), 12 shown:
- ATP + H2O = ADP + phosphate + H(+) (RHEA:13065)
- GTP + H2O = GDP + phosphate + H(+) (RHEA:19669)
- ATP + 2 H2O = AMP + 2 phosphate + 2 H(+) (RHEA:20988)
- GDP + H2O = GMP + phosphate + H(+) (RHEA:22156)
- a ribonucleoside 5’-triphosphate + H2O = a ribonucleoside 5’-diphosphate + phosphate + H(+) (RHEA:23680)
- ITP + H2O = IDP + phosphate + H(+) (RHEA:28330)
- CTP + H2O = CDP + phosphate + H(+) (RHEA:29387)
- IDP + H2O = IMP + phosphate + H(+) (RHEA:35207)
- a ribonucleoside 5’-triphosphate + 2 H2O = a ribonucleoside 5’-phosphate + 2 phosphate + 2 H(+) (RHEA:36795)
- a ribonucleoside 5’-diphosphate + H2O = a ribonucleoside 5’-phosphate + phosphate + H(+) (RHEA:36799)
- ADP + H2O = AMP + phosphate + H(+) (RHEA:61436)
- UDP + H2O = UMP + phosphate + H(+) (RHEA:64876)
UniProt features (79 total): binding site 47, glycosylation site 6, splice variant 6, disulfide bond 5, sequence conflict 5, topological domain 3, transmembrane region 2, sequence variant 2, chain 1, lipid moiety-binding region 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P49961-F1 | 90.85 | 0.78 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 174 (proton acceptor)
Ligand- & substrate-binding residues (47): 57; 57; 57; 58; 58; 58; 58; 58; 59; 59; 59; 59 …
Post-translational modifications (1): 13
Disulfide bonds (5): 84–108, 255–301, 282–325, 338–343, 390–413
Glycosylation sites (6): 73, 227, 292, 334, 371, 457
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-8850843 | Phosphate bond hydrolysis by NTPDase proteins |
| R-HSA-9660826 | Purinergic signaling in leishmaniasis infection |
MSigDB gene sets: 437 (showing top):
GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS, GOBP_PLATELET_ACTIVATION, GOBP_CARBOHYDRATE_DERIVATIVE_CATABOLIC_PROCESS, GOCC_CELL_SURFACE, THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_DN, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GGGTGGRR_PAX4_03, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, GOBP_WOUND_HEALING, GOBP_CELL_CELL_ADHESION, WTGAAAT_UNKNOWN, CASORELLI_APL_SECONDARY_VS_DE_NOVO_UP, GOBP_ORGANOPHOSPHATE_CATABOLIC_PROCESS, ZHOU_INFLAMMATORY_RESPONSE_LIVE_DN
GO Biological Process (9): AMP catabolic process (GO:0006196), cell adhesion (GO:0007155), G protein-coupled receptor signaling pathway (GO:0007186), blood coagulation (GO:0007596), nucleoside diphosphate catabolic process (GO:0009134), ADP catabolic process (GO:0046032), platelet aggregation (GO:0070527), purine ribonucleoside diphosphate catabolic process (GO:0009181), platelet activation (GO:0030168)
GO Molecular Function (16): GTPase activity (GO:0003924), apyrase activity (GO:0004050), GDP phosphatase activity (GO:0004382), ATP binding (GO:0005524), ATP hydrolysis activity (GO:0016887), nucleoside diphosphate phosphatase activity (GO:0017110), ribonucleoside triphosphate phosphatase activity (GO:0017111), CDP phosphatase activity (GO:0036384), ADP phosphatase activity (GO:0043262), CTPase activity (GO:0043273), UDP phosphatase activity (GO:0045134), ITPase activity (GO:0103023), IDP phosphatase activity (GO:1990003), nucleotide binding (GO:0000166), protein binding (GO:0005515), hydrolase activity (GO:0016787)
GO Cellular Component (6): basement membrane (GO:0005604), plasma membrane (GO:0005886), caveola (GO:0005901), external side of plasma membrane (GO:0009897), membrane (GO:0016020), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Nucleotide catabolism | 1 |
| Cell recruitment (pro-inflammatory response) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| nucleoside diphosphate phosphatase activity | 5 |
| ribonucleoside triphosphate phosphatase activity | 4 |
| pyrophosphatase activity | 3 |
| purine ribonucleotide catabolic process | 2 |
| purine ribonucleoside monophosphate catabolic process | 1 |
| AMP metabolic process | 1 |
| cellular process | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| hemostasis | 1 |
| wound healing | 1 |
| coagulation | 1 |
| nucleoside diphosphate metabolic process | 1 |
| nucleoside phosphate catabolic process | 1 |
| purine ribonucleoside diphosphate catabolic process | 1 |
| ADP metabolic process | 1 |
| platelet activation | 1 |
| homotypic cell-cell adhesion | 1 |
| purine nucleoside diphosphate catabolic process | 1 |
| purine ribonucleoside diphosphate metabolic process | 1 |
| ribonucleoside diphosphate catabolic process | 1 |
| cell activation | 1 |
| blood coagulation | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| ATP-dependent activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| extracellular matrix | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane raft | 1 |
| plasma membrane | 1 |
| cell surface | 1 |
| side of membrane | 1 |
| cellular anatomical structure | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
2598 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ENTPD1 | NT5E | P21589 | 998 |
| ENTPD1 | P2RY2 | P41231 | 935 |
| ENTPD1 | ADORA2A | P29274 | 862 |
| ENTPD1 | P2RY1 | P47900 | 820 |
| ENTPD1 | TNFRSF18 | Q9Y5U5 | 800 |
| ENTPD1 | CTLA4 | P16410 | 782 |
| ENTPD1 | FOXP3 | Q9BZS1 | 778 |
| ENTPD1 | CD4 | P01730 | 768 |
| ENTPD1 | CD8A | P01732 | 760 |
| ENTPD1 | ADORA2B | P29275 | 752 |
| ENTPD1 | LAG3 | P18627 | 720 |
| ENTPD1 | HAVCR2 | Q8TDQ0 | 713 |
| ENTPD1 | ADA | P00813 | 704 |
| ENTPD1 | IL10 | P22301 | 697 |
| ENTPD1 | TIGIT | Q495A1 | 692 |
IntAct
7 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ENTPD1 | RANBP9 | psi-mi:“MI:0915”(physical association) | 0.580 |
| RANBP9 | ENTPD1 | psi-mi:“MI:0915”(physical association) | 0.580 |
| ENTPD1 | APC | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (18): ENTPD1 (Affinity Capture-RNA), PJA1 (Affinity Capture-MS), ANKRD50 (Affinity Capture-MS), ANKRD40 (Affinity Capture-MS), WDR60 (Affinity Capture-MS), ANKRD52 (Affinity Capture-MS), ASCC3 (Affinity Capture-MS), ANKRD44 (Affinity Capture-MS), PEX5 (Affinity Capture-MS), USP34 (Affinity Capture-MS), PDE4DIP (Affinity Capture-MS), APC (Affinity Capture-MS), PACSIN2 (Affinity Capture-MS), ENTPD2 (Negative Genetic), ENTPD1 (Affinity Capture-RNA)
ESM2 similar proteins: A0JND9, E1BPW0, O14773, O18956, O35795, O55026, O75173, O75355, O75356, O75578, O89023, O93295, P08514, P08648, P11688, P17405, P49961, P55772, P56201, P79784, P97687, Q04519, Q0VD19, Q12794, Q32M88, Q49HH9, Q49KI5, Q5DRK1, Q5IS74, Q5MY95, Q5RFL1, Q5RFQ8, Q60HH1, Q6P3E7, Q6P6S9, Q717C1, Q717C2, Q7RTX0, Q8BFW6, Q8BNJ2
Diamond homologs: A0JND9, D2GZV9, O18956, O35795, O55026, O75354, O75355, O75356, O93295, P49961, P55772, P79784, P97687, Q3U0P5, Q5DRK1, Q5MY95, Q6NQA8, Q6P6S9, Q8BFW6, Q8H1D8, Q8H7L6, Q8K0L2, Q9ER31, Q9MYU4, Q9QYC8, Q9SQG2, Q9WUZ9, Q9XU84, Q9Y5L3, E1BPW0, E1C1L6, O80612, P32621, P52914, P80595, Q2QYE1, Q6Z4P2, Q8TGG8, Q8TGH6, Q9HEM6
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
251 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 8 |
| Likely pathogenic | 6 |
| Uncertain significance | 100 |
| Likely benign | 84 |
| Benign | 25 |
Top pathogenic / likely-pathogenic (14)
| Variant ID | HGVS | Classification |
|---|---|---|
| 101076 | NM_001776.6(ENTPD1):c.628G>A (p.Gly210Arg) | Pathogenic |
| 101077 | NM_001776.6(ENTPD1):c.520G>T (p.Glu174Ter) | Pathogenic |
| 2129367 | NM_001776.6(ENTPD1):c.1020C>G (p.Tyr340Ter) | Pathogenic |
| 2443792 | NM_001776.6(ENTPD1):c.1109T>A (p.Leu370Ter) | Pathogenic |
| 2443794 | NM_001776.6(ENTPD1):c.640del (p.Gly216fs) | Pathogenic |
| 2784423 | NM_001776.6(ENTPD1):c.861T>A (p.Tyr287Ter) | Pathogenic |
| 3775363 | NM_001776.6(ENTPD1):c.967C>T (p.Gln323Ter) | Pathogenic |
| 802625 | NM_001776.6(ENTPD1):c.770_771del (p.Gly257fs) | Pathogenic |
| 3345590 | NM_001776.6(ENTPD1):c.1018_1021del (p.Tyr340fs) | Likely pathogenic |
| 3638856 | NM_001776.6(ENTPD1):c.813+2C>G | Likely pathogenic |
| 3775912 | NM_001776.6(ENTPD1):c.262+1G>T | Likely pathogenic |
| 3776000 | NM_001776.6(ENTPD1):c.144+1G>A | Likely pathogenic |
| 3779615 | NM_001776.6(ENTPD1):c.17-2A>G | Likely pathogenic |
| 802624 | NM_001776.6(ENTPD1):c.574-6_574-3del | Likely pathogenic |
SpliceAI
2586 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 10:95823235:A:AG | acceptor_gain | 1.0000 |
| 10:95823236:G:GG | acceptor_gain | 1.0000 |
| 10:95823236:GA:G | acceptor_gain | 1.0000 |
| 10:95823361:TAAGG:T | donor_loss | 1.0000 |
| 10:95823364:GGT:G | donor_loss | 1.0000 |
| 10:95823365:G:GC | donor_loss | 1.0000 |
| 10:95823365:G:GG | donor_gain | 1.0000 |
| 10:95823366:TAAG:T | donor_loss | 1.0000 |
| 10:95839689:A:AG | acceptor_gain | 1.0000 |
| 10:95839689:AGTAT:A | acceptor_gain | 1.0000 |
| 10:95839690:G:GG | acceptor_gain | 1.0000 |
| 10:95839690:GT:G | acceptor_gain | 1.0000 |
| 10:95839690:GTAT:G | acceptor_gain | 1.0000 |
| 10:95839690:GTATG:G | acceptor_gain | 1.0000 |
| 10:95844631:GTCAG:G | donor_gain | 1.0000 |
| 10:95820994:G:GT | donor_gain | 0.9900 |
| 10:95823222:T:TA | acceptor_gain | 0.9900 |
| 10:95823228:T:TA | acceptor_gain | 0.9900 |
| 10:95823229:G:A | acceptor_gain | 0.9900 |
| 10:95823231:TTTTA:T | acceptor_loss | 0.9900 |
| 10:95823235:A:C | acceptor_loss | 0.9900 |
| 10:95823236:G:GA | acceptor_loss | 0.9900 |
| 10:95823236:GAGT:G | acceptor_gain | 0.9900 |
| 10:95823360:TTAAG:T | donor_gain | 0.9900 |
| 10:95839677:T:TA | acceptor_loss | 0.9900 |
| 10:95839682:T:A | acceptor_loss | 0.9900 |
| 10:95839685:TTTCA:T | acceptor_loss | 0.9900 |
| 10:95839686:TTCA:T | acceptor_loss | 0.9900 |
| 10:95839687:TCAG:T | acceptor_loss | 0.9900 |
| 10:95839688:CAGT:C | acceptor_loss | 0.9900 |
AlphaMissense
3396 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 10:95866198:T:A | W450R | 1.000 |
| 10:95866198:T:C | W450R | 1.000 |
| 10:95839745:T:A | W67R | 0.999 |
| 10:95839745:T:C | W67R | 0.999 |
| 10:95839747:G:C | W67C | 0.999 |
| 10:95839747:G:T | W67C | 0.999 |
| 10:95844597:T:A | W179R | 0.999 |
| 10:95844597:T:C | W179R | 0.999 |
| 10:95844599:G:C | W179C | 0.999 |
| 10:95844599:G:T | W179C | 0.999 |
| 10:95866200:G:C | W450C | 0.999 |
| 10:95866200:G:T | W450C | 0.999 |
| 10:95866207:G:C | G453R | 0.999 |
| 10:95866208:G:A | G453D | 0.999 |
| 10:95866208:G:T | G453V | 0.999 |
| 10:95839709:G:C | A55P | 0.998 |
| 10:95844611:C:A | N183K | 0.998 |
| 10:95844611:C:G | N183K | 0.998 |
| 10:95866207:G:T | G453C | 0.998 |
| 10:95866217:T:C | L456P | 0.998 |
| 10:95866223:T:C | L458P | 0.998 |
| 10:95839739:T:G | Y65D | 0.997 |
| 10:95844584:A:C | E174D | 0.997 |
| 10:95844584:A:T | E174D | 0.997 |
| 10:95845424:T:C | L214P | 0.997 |
| 10:95845537:A:C | S252R | 0.997 |
| 10:95845539:C:A | S252R | 0.997 |
| 10:95845539:C:G | S252R | 0.997 |
| 10:95839694:G:T | G50W | 0.996 |
| 10:95839704:T:C | L53P | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000017855 (10:95854104 T>C), RS1000019824 (10:95832461 T>C), RS1000041087 (10:95768496 TTTTC>T,TTTTCTTTC), RS1000060246 (10:95814698 C>T), RS1000112958 (10:95858298 C>G), RS1000144594 (10:95760293 G>T), RS1000147428 (10:95825639 A>G), RS1000151373 (10:95777339 T>A,C), RS1000154129 (10:95729784 A>G), RS1000159684 (10:95741806 T>G), RS1000163833 (10:95769355 G>A), RS1000218599 (10:95722296 T>A), RS1000225804 (10:95789075 A>G), RS1000257555 (10:95769972 G>A), RS1000275153 (10:95815540 A>G)
Disease associations
OMIM: gene MIM:601752 | disease phenotypes: MIM:615683, MIM:303350, MIM:258860, MIM:614815
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| hereditary spastic paraplegia 64 | Definitive | Autosomal recessive |
| complex hereditary spastic paraplegia | Definitive | Autosomal recessive |
| neurodevelopmental disorder | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| complex hereditary spastic paraplegia | Definitive | AR |
Mondo (8): hereditary spastic paraplegia 64 (MONDO:0014303), hereditary spastic paraplegia (MONDO:0019064), orofaciodigital syndrome IV (MONDO:0009794), Joubert syndrome 18 (MONDO:0013896), polymicrogyria (MONDO:0000087), microcephaly (MONDO:0001149), complex hereditary spastic paraplegia (MONDO:0015150), neurodevelopmental disorder (MONDO:0700092)
Orphanet (5): Autosomal recessive spastic paraplegia type 64 (Orphanet:401810), Hereditary spastic paraplegia (Orphanet:685), Orofaciodigital syndrome type 4 (Orphanet:2753), Orofaciodigital syndrome type 6 (Orphanet:2754), Polymicrogyria (Orphanet:35981)
HPO phenotypes
16 total (16 of 16 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000252 | Microcephaly |
| HP:0000519 | Developmental cataract |
| HP:0000718 | Aggressive behavior |
| HP:0000823 | Delayed puberty |
| HP:0001249 | Intellectual disability |
| HP:0001257 | Spasticity |
| HP:0001258 | Spastic paraplegia |
| HP:0001260 | Dysarthria |
| HP:0001284 | Areflexia |
| HP:0001288 | Gait disturbance |
| HP:0001762 | Talipes equinovarus |
| HP:0002342 | Moderate intellectual disability |
| HP:0002500 | Abnormal cerebral white matter morphology |
| HP:0003202 | Skeletal muscle atrophy |
| HP:0006889 | Borderline intellectual disability |
GWAS associations
13 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006585_2586 | Blood protein levels | 2.000000e-08 |
| GCST010796_5375 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-15 |
| GCST010796_5376 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-14 |
| GCST010796_5377 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-14 |
| GCST010796_5378 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-12 |
| GCST010796_5379 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-12 |
| GCST010796_5380 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-11 |
| GCST010796_5381 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_5382 | Electrocardiogram morphology (amplitude at temporal datapoints) | 8.000000e-10 |
| GCST010796_5383 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-08 |
| GCST90002400_717 | Plateletcrit | 1.000000e-11 |
| GCST90002401_218 | Platelet distribution width | 8.000000e-12 |
| GCST90002402_126 | Platelet count | 1.000000e-12 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004327 | electrocardiography |
| EFO:0007985 | platelet crit |
| EFO:0007984 | platelet component distribution width |
| EFO:0004309 | platelet count |
MeSH disease descriptors (5)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008831 | Microcephaly | C05.660.207.620; C10.500.507.400.500; C16.131.621.207.620; C16.131.666.507.400.500 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
| D065706 | Polymicrogyria | C10.500.507.500.500; C16.131.666.507.500.500 |
| D015419 | Spastic Paraplegia, Hereditary | C10.500.300.820; C10.574.500.495.820; C10.668.829.800.300.820; C16.131.666.300.820; C16.320.400.375.820 |
| C537133 | Orofaciodigital syndrome 4 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5722 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 36,848 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL265502 | SURAMIN | 3 | 36,848 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Hydrolases & Lipases
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| PSB-0963 | Inhibition | 5.59 | pKi |
| ARL 67156 | Inhibition | 4.57 | pKi |
ChEMBL bioactivities
8 potent at pChembl≥5 of 16 total, top 8 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.30 | IC50 | 50 | nM | CHEMBL5277365 |
| 6.30 | IC50 | 500 | nM | CHEMBL5283491 |
| 6.10 | Ki | 800 | nM | CHEMBL4750781 |
| 6.10 | Ki | 800 | nM | CHEMBL2364580 |
| 6.05 | Ki | 900 | nM | CHEMBL4797422 |
| 5.59 | Ki | 2590 | nM | CHEMBL608559 |
| 5.28 | IC50 | 5200 | nM | CHEMBL4787368 |
| 5.25 | IC50 | 5600 | nM | CHEMBL2364580 |
PubChem BioAssay actives
8 with measured affinity, of 115 total; 7 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-[2-[(E)-(3,4,5-trimethoxyphenyl)methylideneamino]-1,3-thiazol-4-yl]chromen-2-one | 1960114: Inhibition of human NTPDase1 | ic50 | 0.0500 | uM |
| [[(2R,3S,4R,5R)-5-(6-amino-8-butan-2-ylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 1960114: Inhibition of human NTPDase1 | ic50 | 0.5000 | uM |
| [(2R,3S,4R,5R)-5-(6-amino-8-butylsulfanylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate | 1692611: Inhibition of human CD39 using ATP as substrate preincubated for 3 mins followed by substrate addition and measured after 10 to 15 mins by Dixon and Cornish-Bowden plot analysis | ki | 0.8000 | uM |
| [[(2R,3S,4R,5R)-5-(6-amino-8-butylsulfanylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 1692612: Inhibition of human CD39 using ATP as substrate preincubated for 3 mins followed by substrate addition and measured after 10 to 15 mins by Cheng-Prusoff analysis | ki | 0.8000 | uM |
| [(2R,3S,4R,5R)-5-(6-amino-8-butylsulfanylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphono hydrogen phosphate | 1692611: Inhibition of human CD39 using ATP as substrate preincubated for 3 mins followed by substrate addition and measured after 10 to 15 mins by Dixon and Cornish-Bowden plot analysis | ki | 0.9000 | uM |
| sodium 1-amino-4-(anthracen-2-ylamino)-9,10-dioxoanthracene-2-sulfonate | 461580: Inhibition of human NTPdase1 by capillary electrophoresis method | ki | 2.5900 | uM |
| 8-[3-[(5Z)-5-[(Z)-[5-[[5-[(4,6,8-trisulfo-2H-naphthalen-1-ylidene)carbamoyl]cyclohexa-2,4-dien-1-ylidene]carbamoyl]cyclohexa-2,4-dien-1-ylidene]carbamoyl]iminocyclohexa-1,3-diene-1-carbonyl]iminocyclohexa-1,4-diene-1-carbonyl]imino-7H-naphthalene-1,3,5-trisulfonic acid | 1692618: Inhibition of human CD39 expressed in green monkey Cos-7 cells using ATP as substrate preincubated for 3 mins followed by substrate addition by malachite green reagent based assay | ic50 | 5.2000 | uM |
CTD chemical–gene interactions
47 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Estradiol | increases expression, decreases expression, affects cotreatment | 3 |
| Tetrachlorodibenzodioxin | affects cotreatment, increases expression, decreases expression | 3 |
| bisphenol A | decreases methylation, increases expression | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| Nickel | increases expression | 2 |
| Valproic Acid | increases expression, decreases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| testosterone enanthate | affects expression | 1 |
| ethylbenzene | affects cotreatment, decreases methylation, increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| sodium arsenite | decreases methylation | 1 |
| cobaltous chloride | increases expression | 1 |
| nickel sulfate | increases expression | 1 |
| pentanal | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| cerivastatin | decreases expression, decreases reaction | 1 |
| deguelin | increases expression, decreases reaction | 1 |
| 17-(dimethylaminoethylamino)-17-demethoxygeldanamycin | decreases reaction, increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| 2,2’,4,4’,5-brominated diphenyl ether | decreases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| 2-(1’H-indole-3’-carbonyl)thiazole-4-carboxylic acid methyl ester | increases expression | 1 |
| Air Pollutants, Occupational | decreases methylation, increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Azacitidine | increases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Cisplatin | affects cotreatment, increases expression | 1 |
| Cytarabine | increases expression | 1 |
ChEMBL screening assays
32 unique, capped per target: 27 binding, 5 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1001638 | Binding | Activity of human NTPDase 1 expressed in human 293T cells assessed as drug hydrolysis at 100 uM after 20 mins relative to ATP | Identification of hydrolytically stable and selective P2Y(1) receptor agonists. — Eur J Med Chem |
| CHEMBL2390590 | ADMET | Drug metabolism assessed as human nucleotide triphosphate diphosphohydrolase1-mediated compound hydrolysis at 4.24 mM after 1 hr by HPLC analysis relative to ADP | Highly efficient biocompatible neuroprotectants with dual activity as antioxidants and P2Y receptor agonists. — J Med Chem |
Cellosaurus cell lines
7 cell lines: 7 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B8F9 | Abcam HCT 116 ENTPD1 KO | Cancer cell line | Male |
| CVCL_B9HH | Abcam A-549 ENTPD1 KO | Cancer cell line | Male |
| CVCL_D2F1 | Abcam MCF-7 ENTPD1 KO | Cancer cell line | Female |
| CVCL_D8KT | Ubigene HCT 116 ENTPD1 KO | Cancer cell line | Male |
| CVCL_E0CL | Ubigene HeLa ENTPD1 KO | Cancer cell line | Female |
| CVCL_SM09 | HAP1 ENTPD1 (-) 1 | Cancer cell line | Male |
| CVCL_XN46 | HAP1 ENTPD1 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
271 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT07542548 | PHASE4 | COMPLETED | D-Cycloserine for Serine Palmitoyltransferase Inhibition |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT03961906 | PHASE2 | COMPLETED | Physiotherapy in Hereditary Spastic Paraplegia |
| NCT04768166 | PHASE2 | COMPLETED | Testing Miglustat Administration in Subjects With Spastic Paraplegia 11 |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT06117020 | PHASE1 | COMPLETED | Single and Multiple Ascending Dose Study of MTR-601 in Healthy Individuals |
| NCT01783041 | PHASE2/PHASE3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | PHASE2/PHASE3 | RECRUITING | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | EARLY_PHASE1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
| NCT01922791 | Not specified | COMPLETED | Nutrition and Pregnancy Intervention Study |
| NCT01942525 | Not specified | UNKNOWN | Influence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants |
| NCT02003170 | Not specified | COMPLETED | Etiology and Early Diagnosis of Neurodevelopmental Disorders |
| NCT02118649 | Not specified | ACTIVE_NOT_RECRUITING | Enhancing Behavior and Brain Response to Visual Targets Using a Computer Game |
| NCT02557191 | Not specified | TERMINATED | Biomarkers, Neurodevelopment and Preterm Infants |
| NCT02690675 | Not specified | COMPLETED | Iron Supplement Effect on Child Development |
| NCT02694003 | Not specified | COMPLETED | Better Nights, Better Days for Children With Neurodevelopment Disorders |
| NCT02792894 | Not specified | COMPLETED | Family Networks (FaNs) for Children With Developmental Disorders and Delays |
| NCT02871674 | Not specified | UNKNOWN | Good Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial |
| NCT02887157 | Not specified | COMPLETED | Analyzing Retinal Microanatomy in ROP |
| NCT02898298 | Not specified | COMPLETED | Positive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder |
| NCT02912780 | Not specified | UNKNOWN | Introduction of Microsystems in a Level 3 Neonatal Intensive Care Unit |
| NCT03023293 | Not specified | COMPLETED | n-3 PUFAs, Irisin and Maternal Glucose Metabolism From Pregnancy to Postpartum |
| NCT03023644 | Not specified | COMPLETED | Improving Neurodevelopmental Outcomes in Children With Congenital Heart Disease: An Intervention Study |
| NCT03032991 | Not specified | UNKNOWN | Early Biomarkers of Neurodevelopment in Offspring of Diabetic Mothers |
| NCT03088189 | Not specified | TERMINATED | Effect of Parental Peri-conceptional Vitamin B12 Supplementation on Infant Neurocognitive Development in Offspring |
| NCT03096028 | Not specified | COMPLETED | Developmental Origins of Mental Health Disorders |
| NCT03148782 | Not specified | COMPLETED | Brain Plasticity Underlying Acquisition of New Organizational Skills in Children-R61 Phase |
Related Atlas pages
- Associated diseases: hereditary spastic paraplegia 64, complex hereditary spastic paraplegia, neurodevelopmental disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): complex hereditary spastic paraplegia, hereditary spastic paraplegia, hereditary spastic paraplegia 64, Joubert syndrome 18, orofaciodigital syndrome IV, polymicrogyria