EPB41L1-AS1

Summary

EPB41L1-AS1 (EPB41L1 antisense RNA 1, HGNC:55728) is a long non-coding RNA gene on chromosome 20q11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55728
Approved symbol	EPB41L1-AS1
Name	EPB41L1 antisense RNA 1
Location	20q11.23
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL121895.1
Ensembl gene	ENSG00000232406
Ensembl biotype	lncRNA
Entrez	100130373
RNAcentral	URS0000BC44E5 — lncRNA, 1923 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000441208, ENST00000609884, ENST00000652809, ENST00000658515, ENST00000726820, ENST00000726821, ENST00000726822

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441208 — 4 exons

Exon	Start	End
ENSE00001656530	36150413	36152651
ENSE00001659966	36155063	36155254
ENSE00001720281	36155596	36155733
ENSE00001789060	36152955	36153086

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 87.50.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.50	gold quality
primary visual cortex	UBERON:0002436	81.99	gold quality
right adrenal gland cortex	UBERON:0035827	79.39	gold quality
right frontal lobe	UBERON:0002810	78.47	gold quality
superior frontal gyrus	UBERON:0002661	78.22	gold quality
Brodmann (1909) area 9	UBERON:0013540	77.59	gold quality
left adrenal gland cortex	UBERON:0035825	77.47	gold quality
right adrenal gland	UBERON:0001233	77.46	gold quality
frontal cortex	UBERON:0001870	76.19	gold quality
left adrenal gland	UBERON:0001234	76.09	gold quality
adrenal gland	UBERON:0002369	75.94	gold quality
nucleus accumbens	UBERON:0001882	75.79	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	75.41	gold quality
cerebral cortex	UBERON:0000956	74.94	gold quality
prefrontal cortex	UBERON:0000451	74.64	gold quality
putamen	UBERON:0001874	73.44	gold quality
Ammon’s horn	UBERON:0001954	73.40	gold quality
substantia nigra	UBERON:0002038	73.05	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	72.79	gold quality
adrenal tissue	UBERON:0018303	72.68	gold quality
tonsil	UBERON:0002372	72.24	gold quality
colonic epithelium	UBERON:0000397	72.19	gold quality
caudate nucleus	UBERON:0001873	71.95	gold quality
anterior cingulate cortex	UBERON:0009835	71.57	gold quality
brain	UBERON:0000955	70.71	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.59	gold quality
cerebellar hemisphere	UBERON:0002245	69.65	gold quality
cerebellar cortex	UBERON:0002129	69.62	gold quality
cerebellum	UBERON:0002037	69.51	gold quality
corpus callosum	UBERON:0002336	69.12	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.