EPCIP-AS1

Summary

EPCIP-AS1 (EPCIP antisense RNA 1, HGNC:1290) is a long non-coding RNA gene on chromosome 21q22.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:1290
Approved symbol	EPCIP-AS1
Name	EPCIP antisense RNA 1
Location	21q22.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000205930
Ensembl biotype	lncRNA
Entrez	54067
RNAcentral	URS000075B613 — lncRNA, 1215 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 39 — 39 lncRNA

ENST00000382375, ENST00000382377, ENST00000382378, ENST00000454365, ENST00000477513, ENST00000491756, ENST00000612326, ENST00000650763, ENST00000655231, ENST00000661254, ENST00000663888, ENST00000666106, ENST00000669746, ENST00000700822, ENST00000701283, ENST00000701622, ENST00000777210, ENST00000777211, ENST00000777212, ENST00000777213, ENST00000777214, ENST00000777215, ENST00000777216, ENST00000777217, ENST00000777218, ENST00000777219, ENST00000777220, ENST00000777221, ENST00000777222, ENST00000777223, ENST00000777224, ENST00000777225, ENST00000777226, ENST00000777227, ENST00000777228, ENST00000777229, ENST00000777230, ENST00000777231, ENST00000777232

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000382375 — 4 exons

Exon	Start	End
ENSE00001816474	32796939	32798969
ENSE00002479956	32784797	32784919
ENSE00002534803	32772100	32772308
ENSE00003735243	32788612	32788701

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 78.45.

FANTOM5 (CAGE): breadth broad, TPM avg 2.1636 / max 49.4434, expressed in 855 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
188829	2.1636	855

Top tissues by expression

136 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	78.45	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.55	gold quality
corpus callosum	UBERON:0002336	75.90	gold quality
calcaneal tendon	UBERON:0003701	73.65	gold quality
right testis	UBERON:0004534	73.34	gold quality
islet of Langerhans	UBERON:0000006	73.25	gold quality
adrenal tissue	UBERON:0018303	72.96	gold quality
testis	UBERON:0000473	72.86	gold quality
left testis	UBERON:0004533	72.86	gold quality
colonic epithelium	UBERON:0000397	72.72	gold quality
bone marrow cell	CL:0002092	72.24	silver quality
ovary	UBERON:0000992	72.11	gold quality
left ovary	UBERON:0002119	71.72	gold quality
right ovary	UBERON:0002118	70.64	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	70.59	gold quality
spinal cord	UBERON:0002240	70.54	gold quality
right uterine tube	UBERON:0001302	70.26	gold quality
urinary bladder	UBERON:0001255	70.21	gold quality
lymph node	UBERON:0000029	69.33	gold quality
tonsil	UBERON:0002372	69.02	gold quality
monocyte	CL:0000576	68.60	gold quality
leukocyte	CL:0000738	68.50	gold quality
substantia nigra	UBERON:0002038	68.45	gold quality
pancreas	UBERON:0001264	68.04	gold quality
stromal cell of endometrium	CL:0002255	67.16	gold quality
ventricular zone	UBERON:0003053	66.89	gold quality
muscle tissue	UBERON:0002385	66.74	gold quality
kidney	UBERON:0002113	66.70	gold quality
skeletal muscle tissue	UBERON:0001134	66.65	gold quality
cortex of kidney	UBERON:0001225	66.49	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.40

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.