EPO

gene
On this page

Also known as EP

Summary

EPO (erythropoietin, HGNC:3415) is a protein-coding gene on chromosome 7q22.1, encoding Erythropoietin (P01588). Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass.

This gene encodes a secreted, glycosylated cytokine composed of four alpha helical bundles. The encoded protein is mainly synthesized in the kidney, secreted into the blood plasma, and binds to the erythropoietin receptor to promote red blood cell production, or erythropoiesis, in the bone marrow. Expression of this gene is upregulated under hypoxic conditions, in turn leading to increased erythropoiesis and enhanced oxygen-carrying capacity of the blood. Expression of this gene has also been observed in brain and in the eye, and elevated expression levels have been observed in diabetic retinopathy and ocular hypertension. Recombinant forms of the encoded protein exhibit neuroprotective activity against a variety of potential brain injuries, as well as antiapoptotic functions in several tissue types, and have been used in the treatment of anemia and to enhance the efficacy of cancer therapies.

Source: NCBI Gene 2056 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): erythrocytosis, familial, 5 (Strong, GenCC) — +2 more curated relationships
  • GWAS associations: 23
  • Clinical variants (ClinVar): 63 total — 6 pathogenic
  • Phenotypes (HPO): 9
  • Druggable target: yes
  • MANE Select transcript: NM_000799

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:3415
Approved symbolEPO
Nameerythropoietin
Location7q22.1
Locus typegene with protein product
StatusApproved
AliasesEP
Ensembl geneENSG00000130427
Ensembl biotypeprotein_coding
OMIM133170
Entrez2056

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 protein_coding

ENST00000252723

RefSeq mRNA: 1 — MANE Select: NM_000799 NM_000799

CCDS: CCDS5705

Canonical transcript exons

ENST00000252723 — 5 exons

ExonStartEnd
ENSE00000894545100722978100723700
ENSE00001130416100722664100722843
ENSE00001130423100721962100722048
ENSE00001130431100720468100720993
ENSE00001144077100721558100721703

Expression profiles

Bgee: expression breadth broad, 73 present calls, max score 77.36.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0944 / max 12.5491, expressed in 49 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter IDTPM avgSamples expressed
800530.055925
800540.038519

Top tissues by expression

247 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
right lobe of liverUBERON:000111477.36gold quality
triceps brachiiUBERON:000150972.07gold quality
body of pancreasUBERON:000115071.80gold quality
gluteal muscleUBERON:000200070.80gold quality
periodontal ligamentUBERON:000826670.17gold quality
liverUBERON:000210768.49gold quality
type B pancreatic cellCL:000016968.24gold quality
skeletal muscle tissue of biceps brachiiUBERON:000450267.13gold quality
tendon of biceps brachiiUBERON:000818866.10gold quality
olfactory bulbUBERON:000226465.11gold quality
biceps brachiiUBERON:000150764.35gold quality
cartilage tissueUBERON:000241864.15gold quality
diaphragmUBERON:000110363.66gold quality
deltoidUBERON:000147663.31gold quality
lateral nuclear group of thalamusUBERON:000273663.07gold quality
pancreatic ductal cellCL:000207962.92silver quality
endometrium epitheliumUBERON:000481162.75gold quality
trabecular bone tissueUBERON:000248362.59gold quality
endocervixUBERON:000045862.34gold quality
inferior olivary complexUBERON:000212762.28gold quality
dorsal motor nucleus of vagus nerveUBERON:000287062.16gold quality
quadriceps femorisUBERON:000137761.93gold quality
oral cavityUBERON:000016761.91gold quality
vastus lateralisUBERON:000137961.85gold quality
Brodmann (1909) area 23UBERON:001355461.73gold quality
endothelial cellCL:000011561.48gold quality
parotid glandUBERON:000183161.09gold quality
tongue squamous epitheliumUBERON:000691961.09gold quality
deciduaUBERON:000245060.72gold quality
vena cavaUBERON:000408760.71gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

ExperimentMarker?Max mean expression
E-ANND-3no1.64

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

37 targeting EPO, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6127100.0066.762188
HSA-MIR-4510100.0066.602050
HSA-MIR-6129100.0066.462080
HSA-MIR-6130100.0066.692012
HSA-MIR-6133100.0066.482064
HSA-MIR-3064-3P100.0070.091254
HSA-MIR-1212199.9966.64255
HSA-MIR-4715-3P99.9866.03670
HSA-MIR-431999.7669.832586
HSA-MIR-377-5P99.7065.28712
HSA-MIR-608699.7065.38699
HSA-MIR-29B-2-5P99.6768.981726
HSA-MIR-451699.6167.783390
HSA-MIR-125A-5P99.3670.591640
HSA-MIR-125B-5P99.3670.361662
HSA-MIR-10522-5P99.2668.502087
HSA-MIR-876-3P98.7668.23945
HSA-MIR-471098.6165.961048
HSA-MIR-427798.3467.171323
HSA-MIR-891A-3P98.0567.99970
HSA-MIR-442197.9964.89701
HSA-MIR-366197.8367.30705
HSA-MIR-5699-3P97.8165.00861
HSA-MIR-9851-5P97.5767.491067
HSA-MIR-6787-5P97.5463.85457
HSA-MIR-7855-5P97.3967.18925
HSA-MIR-122-5P97.2364.921024
HSA-MIR-6748-3P97.2065.66836
HSA-MIR-63197.0566.93602
HSA-MIR-71196.6065.75528

Literature-anchored findings (GeneRIF, showing 40)

  • used a transient global spinal ischemia model in rabbits to test whether exogenous EPO can cross the blood-spinal cord barrier and protect these motor neurons. (PMID:11854521)
  • Carbohydrate content and structure of EPO are important determinants in their half-life in the circulation. (PMID:11861258)
  • Erythropoietin, tumours and the von Hippel-Lindau gene: towards identification of mechanisms and dysfunction of oxygen sensing. (PMID:11865075)
  • renal failure patients mounted an EPO response to hypoxia but at lower EPO levels (PMID:11869305)
  • Serum erythropoietin levels (s-[epo]), haemoglobin concentration ([Hb]), haematocrit (hct), and ferritin concentration ([fer]) were measured in seven healthy male volunteers (20-23 years) exposed continuously to hypoxia (PO(2) 14 kPa) for 10 days (PMID:11906321)
  • Influence of controlled hypoxia and radical scavenging agents on erythropoietin and malondialdehyde concentrations in humans. (PMID:11906322)
  • Data suggest that erythropoietin may be an endogenous stimulant of blood vessel growth during neonatal gastrointestinal development. (PMID:11919332)
  • Two to three weeks after initiation of hydroxyurea treatment, the sEpo values started to increase and reached levels three to 31 times higher than the baseline two to three weeks later. (PMID:11920206)
  • While both Epo and Epo-R were detected in all samples of isolated epithelial cells analysed throughout the menstrual cycle, neither one was detected in isolated stromal cells. Epo and Epo-R protein expression in glandular epithelial cells was increased (PMID:11994541)
  • Prostaglandin-E2 enhances EPO-mediated STAT5 transcriptional activity by serine phosphorylation of CREB. (PMID:12091337)
  • Increased levels of circulating thrombopoietin were found in patients with clonal thrombocytosis versus patients with reactive thrombocytosis, indicating a potential differential diagnosis tool. (PMID:12171772)
  • data suggest that although chronic lymphocytic leukemia (CLL) anemia is not characterized by inadequate Epo production, in some CLL patients this factor may be correlated; in these cases, levels of TNF-alpha were higher than in other anemic cases (PMID:12187026)
  • REVIEW: pathways by which transcription of erythropoietin is regulated by availability of molecular oxygen (PMID:12207089)
  • hypoxia-inducible gene expression in human neuroblastoma cells (PMID:12239177)
  • triggers a signaling pathway (MAPK p42/44) in vascular endothelial cells and increases the thrombogenicity of their extracellular matrices (PMID:12362243)
  • All regions of kidney express erythropoietin receptors. Review. (PMID:12381912)
  • erythropoietin signalling contributes to the growth and/or survival of both transformed cells and capillary endothelial cells in female reproductive system tumours. (PMID:12419827)
  • Direct comparison of nonglycosylated vs. glycosylated EPO demonstrates how both carbohydrate core structure and sialic acid can dampen electrostatic contributions to receptor association rate constant with little effect on dissociation rate. (PMID:12463751)
  • may play an important role in signal transduction via EpoR on erythroid progenitor in CRF patients. (PMID:12476588)
  • a key role for NF-kappaB in EPO gene regulation in response to hypoxia (PMID:12482504)
  • Epo and Epo-R localized within glandular epithelial cells in both peritoneal endometriosis and eutopic endometrium. Role in pathophysiology of endometriosis. (PMID:12525458)
  • Inhibition of erythropoietin(Epo) gene expression by cadmium depends on suppression of hypoxia-inducible factor 1(HIF-1) binding activity. (PMID:12734640)
  • Results suggest that increased expression of erythropoietin may play a significant role in cervical carcinogenesis and tumor progression. (PMID:12759237)
  • hemoglobin levels are related to the rise in serum EPO that occurs during pregnancy (PMID:12801298)
  • protein CBP/p300 was shown to be essential for EPO- and SCF-mediated STAT5 transactivation (PMID:12829027)
  • Novel function for EPO by providing in vivo evidence for a physiological role during fibrin-induced wound healing. (PMID:12937140)
  • These findings suggest that recombinant human erythropoietin (EPO) attenuates ischemia-induced inflammation by reducing neuronal death rather than by direct effects upon EPO-receptor-expressing inflammatory cells. (PMID:12975460)
  • GATA-4 is critical for transcription of the Epo gene in hepatocytes and may contribute to the switch in the site of Epo gene expression from the fetal liver to the adult kidney (PMID:14583613)
  • Only a minority of papillary thyroid carcinomas (PTC) expressed EPO, and there were no significant differences between the PTC that did or did not express EPO. (PMID:14584755)
  • after rHuEpo stimulation in the chick embryo chorioallantoic membrane assay, the generation of new blood vessels occurred more frequently following an intussusceptive microvascular growth mechanism (PMID:14671634)
  • EPO stimulation significantly increased the level of Akt phosphorylation, the downstream target of PI3-kinase. (PMID:14704034)
  • Overexpression of EPO protects islets from destruction and does not compromise islet function. Genetic engineering with EPO may improve islet survival and engraftment in transplant setting, but regulation of gene expression will be important prerequisite. (PMID:14724429)
  • Results show that recombinant human erythropoietin reduces brain injury, especially apoptotic cell death, after neonatal hypoxia-ischemia. (PMID:14747752)
  • Erythropoietin deficiency may be one of the endocrine abnormalities associated with autoimmune polyglandular syndrome type I. (PMID:14755373)
  • EPO levels increased incompensatively in anemia of chronic disease (ACD) children, which may be a cause of ACD. (PMID:14990112)
  • Erythropoietin protein was constitutively present in seminal plasma. The seminal EPO originated from the prostate and seminal vesicle. No association between EPO levels in seminal plasma and sperm parameters was found. (PMID:15019812)
  • Review summarizes current knowledge of the nonerythropoietic roles of Epo, its neurotrophic and neuroprotective properties, the mechanisms by which Epo produces neuroprotection and the signal transduction systems regulated by Epo in the nervous system. (PMID:15053948)
  • Results show no significant difference in erythropoietin values between non-anemic patients with liver disease and controls. (PMID:15112358)
  • EPO is important for development of the brain and is neuroprotective, whereas it stimulates angiogenesis in the reproductive tract and possibly in other organs–REVIEW (PMID:15142852)
  • Increased erythropoietin expression is associated with endometrial carcinoma (PMID:15160341)

Cross-species orthologs

4 orthologs

OrganismSymbolGene ID
danio_rerioepoaENSDARG00000055163
danio_rerioepobENSDARG00000100737
mus_musculusEpoENSMUSG00000029711
rattus_norvegicusEpoENSRNOG00000001412

Protein

Protein identifiers

ErythropoietinP01588 (reviewed: P01588)

All UniProt accessions (2): P01588, G9JKG7

UniProt curated annotations — full annotation on UniProt →

Function. Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation thereby activating specific downstream effectors, including STAT1 and STAT3.

Subcellular location. Secreted.

Tissue specificity. Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.

Disease relevance. Microvascular complications of diabetes 2 (MVCD2) [MIM:612623] Pathological conditions that develop in numerous tissues and organs as a consequence of diabetes mellitus. They include diabetic retinopathy, diabetic nephropathy leading to end-stage renal disease, and diabetic neuropathy. Diabetic retinopathy remains the major cause of new-onset blindness among diabetic adults. It is characterized by vascular permeability and increased tissue ischemia and angiogenesis. Disease susceptibility is associated with variants affecting the gene represented in this entry. Erythrocytosis, familial, 5 (ECYT5) [MIM:617907] An autosomal dominant disorder characterized by elevated serum hemoglobin and hematocrit. Some patients have increased serum erythropoietin levels. The disease is caused by variants affecting the gene represented in this entry. Diamond-Blackfan anemia-like (DBAL) [MIM:617911] An autosomal recessive hematologic disease characterized by severe red cell hypoplastic anemia, selective absence of red cell precursors and progenitors seen on bone marrow biopsy, and increased serum erythropoietin. The disease is caused by variants affecting the gene represented in this entry.

Similarity. Belongs to the EPO/TPO family.

RefSeq proteins (1): NP_000790* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001323EPO_TPOFamily
IPR003013ErythroptnFamily
IPR0090794_helix_cytokine-like_coreHomologous_superfamily
IPR019767EPO/TPO_CSConserved_site

Pfam: PF00758

UniProt features (33 total): helix 9, sequence variant 8, glycosylation site 4, strand 4, sequence conflict 3, disulfide bond 2, signal peptide 1, chain 1, mutagenesis site 1

Structure

Experimental structures (PDB)

3 structures.

PDBMethodResolution (Å)
1EERX-RAY DIFFRACTION1.9
1CN4X-RAY DIFFRACTION2.8
1BUYSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P01588-F187.120.66

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Disulfide bonds (2): 34–188, 56–60

Glycosylation sites (4): 51, 65, 110, 153

Mutagenesis-validated functional residues (1):

PositionPhenotype
127decreased erythrocyte proliferation; impaired epor dimerization following binding.

Function

Pathways and Gene Ontology

Reactome pathways

6 pathways

IDPathway
R-HSA-1234158Regulation of gene expression by Hypoxia-inducible Factor
R-HSA-9006335Signaling by Erythropoietin
R-HSA-9027276Erythropoietin activates Phosphoinositide-3-kinase (PI3K)
R-HSA-9027277Erythropoietin activates Phospholipase C gamma (PLCG)
R-HSA-9027283Erythropoietin activates STAT5
R-HSA-9027284Erythropoietin activates RAS

MSigDB gene sets: 282 (showing top): GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_HEMOGLOBIN_METABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_TRANSMEMBRANE_TRANSPORT, GOBP_REGULATION_OF_LEUKOCYTE_PROLIFERATION, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_RESPONSE_TO_ELECTRICAL_STIMULUS, HARRIS_HYPOXIA, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_MYELOID_CELL_DEVELOPMENT, GOBP_INFLAMMATORY_RESPONSE, GOBP_RESPONSE_TO_PEPTIDE, GOBP_RESPONSE_TO_CORTICOSTEROID, LFA1_Q6, GOBP_POSITIVE_REGULATION_OF_NEURON_DIFFERENTIATION

GO Biological Process (40): negative regulation of transcription by RNA polymerase II (GO:0000122), response to hypoxia (GO:0001666), acute-phase response (GO:0006953), signal transduction (GO:0007165), embryo implantation (GO:0007566), blood circulation (GO:0008015), positive regulation of cell population proliferation (GO:0008284), response to salt stress (GO:0009651), negative regulation of calcium ion transport into cytosol (GO:0010523), positive regulation of neuron projection development (GO:0010976), erythrocyte differentiation (GO:0030218), response to lipopolysaccharide (GO:0032496), myeloid cell apoptotic process (GO:0033028), response to vitamin A (GO:0033189), response to testosterone (GO:0033574), erythropoietin-mediated signaling pathway (GO:0038162), positive regulation of activated T cell proliferation (GO:0042104), hemoglobin biosynthetic process (GO:0042541), erythrocyte maturation (GO:0043249), response to estrogen (GO:0043627), positive regulation of neuron differentiation (GO:0045666), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of Ras protein signal transduction (GO:0046579), response to axon injury (GO:0048678), response to electrical stimulus (GO:0051602), response to hyperoxia (GO:0055093), positive regulation of ERK1 and ERK2 cascade (GO:0070374), response to interleukin-1 (GO:0070555), cellular hyperosmotic response (GO:0071474), response to dexamethasone (GO:0071548), cell surface receptor signaling pathway via STAT (GO:0097696), negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress (GO:1902219), negative regulation of erythrocyte apoptotic process (GO:1902251), regulation of transcription by RNA polymerase II (GO:0006357), apoptotic process (GO:0006915), response to stress (GO:0006950), response to nutrient (GO:0007584), negative regulation of myeloid cell apoptotic process (GO:0033033), negative regulation of apoptotic process (GO:0043066), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161)

GO Molecular Function (5): cytokine activity (GO:0005125), erythropoietin receptor binding (GO:0005128), hormone activity (GO:0005179), protein kinase activator activity (GO:0030295), protein binding (GO:0005515)

GO Cellular Component (4): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), cell surface (GO:0009986), cell body (GO:0044297)

Reactome top-level categories

Rollup of top-3 pathways:

CategoryPathways
Signaling by Erythropoietin4
Cellular response to hypoxia1
Signal Transduction1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
response to lipid3
cellular anatomical structure3
receptor ligand activity2
regulation of transcription by RNA polymerase II1
transcription by RNA polymerase II1
negative regulation of DNA-templated transcription1
response to stress1
response to decreased oxygen levels1
acute inflammatory response1
cell communication1
cellular process1
signaling1
regulation of cellular process1
cellular response to stimulus1
multicellular organism development1
female pregnancy1
reproductive process1
circulatory system process1
cell population proliferation1
regulation of cell population proliferation1
positive regulation of cellular process1
response to osmotic stress1
regulation of calcium ion transport into cytosol1
negative regulation of cytosolic calcium ion concentration1
calcium ion transport into cytosol1
negative regulation of calcium ion transmembrane transport1
regulation of neuron projection development1
neuron projection development1
positive regulation of cell projection organization1
myeloid cell differentiation1
erythrocyte homeostasis1
response to molecule of bacterial origin1
response to oxygen-containing compound1
apoptotic process1
response to vitamin1
response to ketone1
cytokine-mediated signaling pathway1
cellular response to erythropoietin1
positive regulation of T cell proliferation1
regulation of activated T cell proliferation1

Protein interactions and networks

STRING

2907 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
EPOEPORP19235999
EPOJAK2O60674974
EPOIL3P08700955
EPOTHPOP40225925
EPOCSF3P09919909
EPOHAMPP81172904
EPOEPAS1Q99814882
EPOHIF1AQ16665877
EPOCSF2P04141876
EPOTFRCP02786858
EPOEGLN1Q9GZT9851
EPOMPLP40238839
EPOKITLGP21583818
EPOSTAT5BP51692798
EPOINSP01308787

IntAct

16 interactions, top by confidence:

ABTypeScore
EPOREPOpsi-mi:“MI:0407”(direct interaction)0.610
EPOEPORpsi-mi:“MI:0915”(physical association)0.610
EPOEPHB4psi-mi:“MI:0407”(direct interaction)0.540
EPHB4EPOpsi-mi:“MI:0407”(direct interaction)0.540
EPOEPHB4psi-mi:“MI:0915”(physical association)0.540
EPHB4EPOpsi-mi:“MI:0915”(physical association)0.540
EPOMAN1A1psi-mi:“MI:0915”(physical association)0.500
EPOEP300psi-mi:“MI:0915”(physical association)0.370
EPOCFTRpsi-mi:“MI:0915”(physical association)0.370
EPOEPORpsi-mi:“MI:0914”(association)0.350
EPOB4GALT5psi-mi:“MI:0914”(association)0.350
DOK2EPOpsi-mi:“MI:0915”(physical association)0.000

BioGRID (22): EPOR (Two-hybrid), EPOR (Affinity Capture-MS), GINM1 (Affinity Capture-MS), EPO (Reconstituted Complex), EPO (Co-localization), EPO (Reconstituted Complex), EPO (Reconstituted Complex), EPOR (Affinity Capture-Luminescence), B4GALT6 (Affinity Capture-MS), PTPRS (Affinity Capture-MS), KIAA0319L (Affinity Capture-MS), MAN1A1 (Affinity Capture-MS), B4GALT5 (Affinity Capture-MS), EPOR (Reconstituted Complex), EPOR (Reconstituted Complex)

ESM2 similar proteins: A0A140LIA7, A0A1B0GTL2, A2VDX9, A3FFS8, A6NCS6, A8MVW0, K9M1U5, O43541, P01588, P03971, P03972, P07321, P07865, P0C7N4, P0DPE3, P13725, P27106, P29676, P33707, P33708, P33709, P48617, P49000, P49157, P53346, P79295, Q02011, Q0Z956, Q16619, Q1HCM0, Q28513, Q29RM6, Q5BLP8, Q5S1V9, Q60753, Q63086, Q65Z15, Q6H8S9, Q6H8T0, Q6H8T1

Diamond homologs: A3FFS8, P01588, P07321, P07865, P29676, P33707, P33708, P33709, P48617, P49157, Q0Z956, Q28513, Q2XNF5, Q4T554, Q5IGQ0, Q6H8S9, Q6H8T0, Q6H8T1, Q6H8T2, Q6JV22, Q867B1, Q9GKA2, P40225

SIGNOR signaling

6 interactions.

AEffectBMechanism
HIF1A“up-regulates quantity”EPO“transcriptional regulation”
EPO“up-regulates quantity by expression”HBB“transcriptional regulation”
EPO“up-regulates quantity by expression”HBA1“transcriptional regulation”
EPOup-regulatesEPORbinding
HIF1A“up-regulates quantity by expression”EPO“transcriptional regulation”

Disease & clinical

Clinical variants and AI predictions

ClinVar

63 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic6
Likely pathogenic0
Uncertain significance30
Likely benign13
Benign9

Top pathogenic / likely-pathogenic (6)

Variant IDHGVSClassification
3906264EPO, -252C-T, PROMOTERPathogenic
3906265EPO, IVS1, T-C, -28Pathogenic
3906266EPO, IVS1, A-G, -26Pathogenic
496593NM_000799.4(EPO):c.33del (p.Trp11fs)Pathogenic
496594NM_000799.4(EPO):c.20del (p.Pro7fs)Pathogenic
496595NM_000799.4(EPO):c.530G>A (p.Arg177Gln)Pathogenic

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

1214 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
7:100722005:T:AV68D0.994
7:100722036:G:CW78C0.991
7:100722036:G:TW78C0.991
7:100723075:T:CF175S0.990
7:100723075:T:GF175C0.985
7:100722694:G:CG93R0.979
7:100723088:G:CK179N0.977
7:100723088:G:TK179N0.977
7:100722715:G:CA100P0.976
7:100722808:A:CS131R0.976
7:100722810:C:AS131R0.976
7:100722810:C:GS131R0.976
7:100723074:T:CF175L0.976
7:100723076:C:AF175L0.976
7:100723076:C:GF175L0.976
7:100723098:T:GY183D0.975
7:100723084:G:AG178E0.974
7:100723083:G:AG178R0.973
7:100723083:G:CG178R0.973
7:100722008:C:GP69R0.970
7:100722034:T:AW78R0.966
7:100722034:T:CW78R0.966
7:100722698:T:CL94P0.966
7:100723084:G:TG178V0.966
7:100722024:T:AN74K0.965
7:100722024:T:GN74K0.965
7:100722008:C:AP69Q0.964
7:100722719:T:AV101D0.963
7:100723086:A:GK179E0.958
7:100722707:T:CL97P0.956

dbSNP variants (sampled 300 via entrez): RS1001117144 (7:100719744 T>C), RS1001251654 (7:100723270 A>G), RS1002119724 (7:100718607 G>A), RS1002253651 (7:100718736 C>A,T), RS1003573837 (7:100721619 C>T), RS1003790679 (7:100720712 C>A,T), RS1004479776 (7:100718696 A>G), RS1004580938 (7:100723707 TCTTGG>T), RS1005590776 (7:100722256 A>G), RS1005844562 (7:100719108 A>G,T), RS1005918224 (7:100718967 T>G), RS1007519774 (7:100720639 G>C), RS1008054609 (7:100719393 T>C), RS1008812599 (7:100724015 T>C), RS1009595668 (7:100719431 G>A)

Disease associations

OMIM: gene MIM:133170 | disease phenotypes: MIM:612623, MIM:617907, MIM:617911

GenCC curated gene-disease

DiseaseClassificationInheritance
erythrocytosis, familial, 5StrongAutosomal dominant
autosomal dominant secondary polycythemiaSupportiveAutosomal dominant
Diamond-Blackfan anemia-likeLimitedAutosomal recessive

Mondo (4): microvascular complications of diabetes, susceptibility to, 2 (MONDO:0012962), erythrocytosis, familial, 5 (MONDO:0033483), Diamond-Blackfan anemia-like (MONDO:0060662), (MONDO:0016599)

Orphanet (0):

HPO phenotypes

9 total (9 of 9 shown, HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000007Autosomal recessive inheritance
HP:0001899Increased hematocrit
HP:0001900Increased circulating hemoglobin concentration
HP:0001901Polycythemia
HP:0003593Infantile onset
HP:0012410Pure red cell aplasia
HP:0033074Steroid-responsive anemia
HP:0033644Elevated circulating erythropoietin concentration

GWAS associations

23 associations (top):

StudyTraitp-value
GCST000500_3Other erythrocyte phenotypes1.000000e-09
GCST001725_95Inflammatory bowel disease2.000000e-13
GCST004601_102Red blood cell count2.000000e-92
GCST004604_124Hematocrit4.000000e-12
GCST004604_125Hematocrit4.000000e-32
GCST004615_51Hemoglobin concentration1.000000e-10
GCST005028_3Pursuit maintenance gain in psychotic disorders1.000000e-07
GCST006585_2693Blood protein levels2.000000e-06
GCST009466_2Hematocrit6.000000e-09
GCST009467_4Hemoglobin levels3.000000e-08
GCST010002_259Refractive error3.000000e-16
GCST010083_119Hemoglobin levels2.000000e-73
GCST010245_28LDL cholesterol levels5.000000e-09
GCST90002383_430Hematocrit8.000000e-56
GCST90002383_434Hematocrit8.000000e-44
GCST90002383_435Hematocrit1.000000e-89
GCST90002384_159Hemoglobin3.000000e-36
GCST90002384_160Hemoglobin1.000000e-78
GCST90002400_44Plateletcrit5.000000e-09
GCST90002403_586Red blood cell count1.000000e-46
GCST90002403_587Red blood cell count3.000000e-55
GCST90020029_879Waist circumference adjusted for body mass index8.000000e-09
GCST90020029_880Waist circumference adjusted for body mass index3.000000e-08

EFO canonical traits (7, from GWAS)

EFO IDTrait name
EFO:0004305erythrocyte count
EFO:0004348hematocrit
EFO:0004509hemoglobin measurement
EFO:0008433pursuit maintenance gain measurement
EFO:0004611low density lipoprotein cholesterol measurement
EFO:0007985platelet crit
EFO:0007789BMI-adjusted waist circumference

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5837 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

103 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Oxygenaffects binding, increases reaction, affects reaction, decreases expression, decreases reaction (+3 more)11
cobaltous chloridedecreases reaction, increases expression, affects expression, increases reaction9
Benzo(a)pyrenedecreases expression, increases expression, increases methylation, affects methylation4
Amphotericin Baffects binding, decreases reaction, increases expression, decreases expression3
Cisplatindecreases reaction, increases expression, decreases abundance, increases activity, decreases response to substance (+1 more)3
Cobaltdecreases reaction, increases expression3
Quercetindecreases expression, affects cotreatment, decreases reaction, increases expression3
Ribavirinaffects cotreatment, affects expression, increases expression3
bisphenol Aaffects expression, decreases reaction, increases expression2
formononetinincreases expression2
sodium arsenateincreases abundance, increases secretion, decreases reaction, increases expression, decreases expression (+1 more)2
2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneaffects cotreatment, increases expression, decreases reaction, increases abundance2
7,3’-dihydroxy-4’-methoxyisoflavoneincreases expression2
calycosin-7-O-beta-D-glucosideincreases expression2
Enalaprildecreases expression2
Etoposidedecreases reaction, increases activity, affects cotreatment, increases response to substance2
Clioquinoldecreases expression, increases expression2
Cyclosporinedecreases expression2
Aflatoxin B1decreases expression2
aristolochic acid Iincreases expression1
cremophor ELdecreases response to substance1
OTX015decreases expression1
mivebresibdecreases expression1
dihydrotanshinone Iincreases expression, decreases reaction1
tempolincreases expression, decreases reaction1
sapropterindecreases abundance, decreases reaction1
baicaleinincreases expression1
emulphogene BC 720increases expression1
Nonidet P-40decreases expression1
IMOL S-140decreases expression1

ChEMBL screening assays

2 unique, capped per target: 2 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL5130506BindingIrreversible inhibition of EPO (unknown origin) incubated with compound followed by drug washing and later treated with H2O2 for enzyme reactivation by chemiluminescence assayDiscovery of AZD4831, a Mechanism-Based Irreversible Inhibitor of Myeloperoxidase, As a Potential Treatment for Heart Failure with Preserved Ejection Fraction. — J Med Chem

Cellosaurus cell lines

10 cell lines: 5 transformed cell line, 4 spontaneously immortalized cell line, 1 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_6369BHK21-pcDNA3.1-HCSpontaneously immortalized cell lineMale
CVCL_A8SQCHO-gmt4D-EPO-GnT ISpontaneously immortalized cell lineFemale
CVCL_B0H2Sp2/0-Ag14 hEPOCancer cell lineFemale
CVCL_B5T3RS-1C9Transformed cell lineMale
CVCL_D9WUUbigene HTR-8/SVneo EPO KOTransformed cell lineSex unspecified
CVCL_JZ95CHO-ADLETransformed cell lineFemale
CVCL_JZ96CHO-AFLETransformed cell lineFemale
CVCL_RQ72BHK-21A EPO40Spontaneously immortalized cell lineMale
CVCL_RQ73BHK-21A EPO40-ST6NISpontaneously immortalized cell lineMale
CVCL_VU03CHO B8-300Transformed cell lineFemale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.