ERBB3
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Also known as HER3
Summary
ERBB3 (erb-b2 receptor tyrosine kinase 3, HGNC:3431) is a protein-coding gene on chromosome 12q13.2, encoding Receptor tyrosine-protein kinase erbB-3 (P21860). Tyrosine-protein kinase that plays an essential role as cell surface receptor for neuregulins. In precision oncology, ERBB2 Mutation OR ERBB3 Mutation confers sensitivity to Trastuzumab + Pertuzumab in Colorectal Cancer (CIViC Level B); 17 further curated variant–drug associations are listed below.
This gene encodes a member of the epidermal growth factor receptor (EGFR) family of receptor tyrosine kinases. This membrane-bound protein has a neuregulin binding domain but not an active kinase domain. It therefore can bind this ligand but not convey the signal into the cell through protein phosphorylation. However, it does form heterodimers with other EGF receptor family members which do have kinase activity. Heterodimerization leads to the activation of pathways which lead to cell proliferation or differentiation. Amplification of this gene and/or overexpression of its protein have been reported in numerous cancers, including prostate, bladder, and breast tumors. Alternate transcriptional splice variants encoding different isoforms have been characterized. One isoform lacks the intermembrane region and is secreted outside the cell. This form acts to modulate the activity of the membrane-bound form. Additional splice variants have also been reported, but they have not been thoroughly characterized.
Source: NCBI Gene 2065 — RefSeq curated summary.
At a glance
- Gene–disease (curated): lethal congenital contracture syndrome 2 (Strong, GenCC) — +2 more curated relationships
- GWAS associations: 28
- Clinical variants (ClinVar): 247 total — 7 pathogenic, 15 likely-pathogenic
- Phenotypes (HPO): 59
- Druggable target: yes — 23 molecules with ChEMBL bioactivity
- Precision-oncology evidence (CIViC): 18 curated variant–drug associations
- Cancer driver (intOGen): activating (oncogene-like) across 11 cancer types
- MANE Select transcript:
NM_001982
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3431 |
| Approved symbol | ERBB3 |
| Name | erb-b2 receptor tyrosine kinase 3 |
| Location | 12q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HER3 |
| Ensembl gene | ENSG00000065361 |
| Ensembl biotype | protein_coding |
| OMIM | 190151 |
| Entrez | 2065 |
Gene structure
Transcript identifiers
Ensembl transcripts: 37 — 16 protein_coding, 16 retained_intron, 3 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
ENST00000267101, ENST00000411731, ENST00000415288, ENST00000546748, ENST00000546884, ENST00000548709, ENST00000549061, ENST00000549205, ENST00000549282, ENST00000549472, ENST00000549644, ENST00000549672, ENST00000549832, ENST00000550070, ENST00000550828, ENST00000550869, ENST00000551085, ENST00000551176, ENST00000551242, ENST00000552691, ENST00000553131, ENST00000643266, ENST00000643518, ENST00000682431, ENST00000682512, ENST00000682873, ENST00000683018, ENST00000683059, ENST00000683142, ENST00000683164, ENST00000683653, ENST00000684500, ENST00000684766, ENST00000878113, ENST00000878114, ENST00000878115, ENST00000926495
RefSeq mRNA: 2 — MANE Select: NM_001982
NM_001005915, NM_001982
CCDS: CCDS31833, CCDS44918
Canonical transcript exons
ENST00000267101 — 28 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001059664 | 56092747 | 56092820 |
| ENSE00001143833 | 56098759 | 56098905 |
| ENSE00001143926 | 56093345 | 56093550 |
| ENSE00001143935 | 56092986 | 56093076 |
| ENSE00001607896 | 56086531 | 56086656 |
| ENSE00001696674 | 56087795 | 56087913 |
| ENSE00001713759 | 56087577 | 56087642 |
| ENSE00001784438 | 56088021 | 56088162 |
| ENSE00002347570 | 56101529 | 56103505 |
| ENSE00002427897 | 56080165 | 56080382 |
| ENSE00003336426 | 56094402 | 56094556 |
| ENSE00003384797 | 56094099 | 56094189 |
| ENSE00003462599 | 56095257 | 56095310 |
| ENSE00003469228 | 56088543 | 56088656 |
| ENSE00003471260 | 56098500 | 56098575 |
| ENSE00003491886 | 56096748 | 56096846 |
| ENSE00003493556 | 56101061 | 56101361 |
| ENSE00003532895 | 56097785 | 56097940 |
| ENSE00003556105 | 56095665 | 56095806 |
| ENSE00003556206 | 56084995 | 56085181 |
| ENSE00003571409 | 56099648 | 56099745 |
| ENSE00003586860 | 56088748 | 56088868 |
| ENSE00003606070 | 56096503 | 56096622 |
| ENSE00003647015 | 56083751 | 56083902 |
| ENSE00003647790 | 56093764 | 56093896 |
| ENSE00003660791 | 56097045 | 56097230 |
| ENSE00003686253 | 56099838 | 56100029 |
| ENSE00003689485 | 56100174 | 56100245 |
Expression profiles
Bgee: expression breadth ubiquitous, 274 present calls, max score 99.07.
FANTOM5 (CAGE): breadth broad, TPM avg 12.5090 / max 300.1572, expressed in 771 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 126054 | 8.8360 | 703 |
| 126052 | 2.1530 | 553 |
| 126050 | 0.9881 | 412 |
| 126053 | 0.2865 | 184 |
| 126051 | 0.1502 | 81 |
| 126055 | 0.0953 | 43 |
Top tissues by expression
293 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| trigeminal ganglion | UBERON:0001675 | 99.07 | gold quality |
| jejunal mucosa | UBERON:0000399 | 98.89 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 98.82 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 98.52 | gold quality |
| corpus callosum | UBERON:0002336 | 98.47 | gold quality |
| colonic mucosa | UBERON:0000317 | 98.42 | gold quality |
| ileal mucosa | UBERON:0000331 | 98.42 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 98.30 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 98.29 | gold quality |
| duodenum | UBERON:0002114 | 98.06 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 97.87 | gold quality |
| tibial nerve | UBERON:0001323 | 97.77 | gold quality |
| peripheral nervous system | UBERON:0000010 | 97.76 | gold quality |
| nerve | UBERON:0001021 | 97.76 | gold quality |
| pylorus | UBERON:0001166 | 97.62 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 97.54 | gold quality |
| bronchial epithelial cell | CL:0002328 | 97.44 | gold quality |
| upper arm skin | UBERON:0004263 | 97.43 | gold quality |
| upper leg skin | UBERON:0004262 | 97.38 | gold quality |
| endometrium epithelium | UBERON:0004811 | 97.35 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 97.32 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 97.29 | gold quality |
| minor salivary gland | UBERON:0001830 | 97.19 | gold quality |
| parotid gland | UBERON:0001831 | 97.15 | gold quality |
| sural nerve | UBERON:0015488 | 96.97 | gold quality |
| mouth mucosa | UBERON:0003729 | 96.90 | gold quality |
| skin of abdomen | UBERON:0001416 | 96.87 | gold quality |
| esophagus mucosa | UBERON:0002469 | 96.77 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 96.73 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 96.69 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-56 | yes | 323.78 |
| E-MTAB-8410 | yes | 44.07 |
| E-HCAD-11 | yes | 22.69 |
| E-HCAD-9 | yes | 8.02 |
| E-CURD-135 | no | 869.09 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| AR | Activation |
Upstream regulators (CollecTRI, top): AR, FOXA1, GRHL2, NRG1, SOX10, TFAP2A, TFAP2C, TFAP2D, TWIST1, TWIST2, YBX1, ZNF217
miRNA regulators (miRDB)
154 targeting ERBB3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-512-3P | 99.97 | 67.35 | 1049 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-6888-3P | 99.97 | 65.95 | 1170 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-22-3P | 99.93 | 68.13 | 917 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AM-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AQ-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-454-3P | 99.91 | 74.01 | 1925 |
| HSA-MIR-130A-3P | 99.90 | 73.31 | 1861 |
| HSA-MIR-130B-3P | 99.90 | 73.27 | 1850 |
| HSA-MIR-301A-3P | 99.90 | 73.15 | 1839 |
| HSA-MIR-301B-3P | 99.90 | 73.19 | 1836 |
| HSA-MIR-3666 | 99.90 | 73.24 | 1833 |
| HSA-MIR-4295 | 99.90 | 73.11 | 1838 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-124-3P | 99.89 | 73.74 | 3043 |
| HSA-MIR-506-3P | 99.89 | 73.55 | 3057 |
| HSA-MIR-302A-3P | 99.89 | 71.23 | 1777 |
| HSA-MIR-302B-3P | 99.89 | 71.23 | 1777 |
| HSA-MIR-302C-3P | 99.89 | 71.20 | 1778 |
| HSA-MIR-302D-3P | 99.89 | 71.25 | 1777 |
Literature-anchored findings (GeneRIF, showing 40)
- AP-2gamma is important in the regulation of Erbb-3 expression in human mammary epithelial and lung fibroblast cells (PMID:11859873)
- Epidermal growth factor contains both positive and negative determinants for interaction with ErbB-2/ErbB-3 heterodimers (PMID:11914075)
- Role of the N-terminus of epidermal growth factor in binding studied by phage display. (PMID:12093292)
- structure reveals a contact between domains II and IV that constrains the relative orientations of ligand-binding domains (PMID:12154198)
- Nrdp1/FLRF is a ubiquitin ligase promoting ubiquitination and degradation of this epidermal growth factor receptor family member (PMID:12411582)
- role of overexpression in lung cancer development in conjunction with erb-B-2 overexpression (PMID:12483526)
- the ErbB-3 affinity of a ligand determines whether it can form only ErbB-2/ErbB-3 complexes or also ErbB-3 homodimers. (PMID:12556529)
- Activation of ErbB3 pathway may contribute to the development of dedifferentiated carcinomas (PMID:12618754)
- Expression of epidermal growth factor receptor, erbB2, and erbB3, but not erbB4, was detected throughout the epidermis. Labeling for erbB2 and erbB3 accentuated in upper spinous layers (PMID:12768307)
- These results suggest that ErbB3 expression alone does not uniquely confer IFN-alpha growth responsiveness, but instead may amplify proliferation rates in MM cells that have acquired atypical expression of this receptor. (PMID:12789268)
- ErbB2/ErbB3 dimer functions as an oncogenic unit to drive breast tumor cell proliferation. (PMID:12853564)
- ERBB2 and ERBB3 expression is inhibited by quercetin, resulting in decreased autophosphorylation and cell growth (PMID:12888923)
- Overexpression of ErbB3 is associated with transitional cell carcinoma of the bladder (PMID:14614020)
- ErbB3 is involved in IFN-alpha-induced proliferation of myeloma cells. (PMID:14647450)
- heterodimer formation with heregulin regulates erbB2 receptor (PMID:14737100)
- This review summarizes evidence of defective expression of erbB3 in the prefrontal cortex of schizophrenic patients, implicating erbB3 involvement in the pathogenesis of schizophrenia. (PMID:15162166)
- ErbB3 is an obligate heterodimerization partner because of its inability to homodimerize. (PMID:15225657)
- before extracellular signal-regulated kinase activation and aquaporin synthesis, the membrane-bound prohormone neuregulin 1-beta is cleaved and binds to human epidermal growth factor receptor 3 (PMID:15498868)
- calculated binding free energies between the N-SH2 domain of PI-3 kinase and P-peptides generated by erbb3 showed excellent qualitative agreement with SPR data with a correlation coefficient of 0.91 (PMID:15520002)
- most of the ErbB3-ECD on the cell surface is apparently kept in an open conformation through oligomerization (PMID:15611073)
- ErbB3 proteins are promising targets for therapy, and siRNAs may be useful for this purpose. (PMID:15688028)
- Potential of anti-HER3 antibodies for the therapy of breast cancer and other malignancies characterized by overexpression of HER3. (PMID:15704104)
- Inhibition of HER2/HER3 signaling protects against pulmonary fibrosis and improves survival. (PMID:15731393)
- Transcriptional activity of eztrogen receptor beta was altered in a manner similar to ERalpha by activation of ErbB2/ErbB3. (PMID:15862947)
- Cell proliferation was increased when ErbB2 and ErbB3 were both overexpressed. (PMID:16199884)
- the most notable changes consisted in the overexpression of ErbB3 by Schwann cells of nerves from Charcot-Marie-tooth disease type 1A patients (PMID:16307437)
- ERBB3 is the pivotal element of the Erbb pathway promoting tumorigenesis by heterodimerization with NEU or EGFR, but the NEU/EGFR dimer does not appear to play a significant role in prostate cancer (PMID:16401639)
- HER2 overexpression was the best single predictive marker, but combinations of HER3, HER2 markers provided additional predictive information. (PMID:16622439)
- The high frequency of ErbB3 nuclear localization in hormone-refractory tissues indicates that ErbB3 warrants further study to understand its association with prostate cancer disease progression. (PMID:16675564)
- HER3 and HER4 has been related to a favourable prognosis in bladder cancer. (PMID:16685269)
- Muc4 potentiates neuregulin signaling by increasing the cell-surface populations of ErbB2 and ErbB3 (PMID:16690615)
- ErbB3 has six binding sites for PI3K. All three Y-E-Y motifs contain a binding site for PI3K at the first tyrosine residue. 2 motifs contain a binding site for Grb2 at the second tyrosine. (PMID:16729043)
- the neuregulin/ERBB3 signaling pathway is constitutively activated in clear cell sarcoma of soft tissue (PMID:16867224)
- Sox10-regulated overexpression of ErbB3 may be driving growth in pilocytic astrocytoma. (PMID:16896310)
- failure to find genetic association suggests that the differential expression of ERBB3 in schizophrenia may be environmentally driven, or involve cis- or trans-acting genetic factors beyond the boundaries of the gene itself (PMID:16958035)
- enhanced signaling from the HER2/neu-HER3 pathway has a role in growth of tumors treated with fulvestrant in the presence of physiologic estradiol: pertuzumab partially inhibits growth and HER2/neu with HER3 interact in vivo (PMID:17203234)
- Neuregulin 1-induced protein stability cascade involving USP8 and Nrdp1 mediates the down-regulation of ErbB3 (PMID:17210635)
- there were no significant association between the polymorphisms or haplotypes of ERBB3 and schizophrenia; study shows that ERBB3 does not play a major role in conferring susceptibility to schizophrenia in the Japanese population (PMID:17275115)
- findings show that amplification of MET causes gefitinib resistance in lung cancer by driving ERBB3 (HER3)-dependent activation of PI3K, a pathway thought to be specific to EGFR/ERBB family receptors (PMID:17463250)
- HER3 signaling pathway plays an important role in the biological behavior of certain non-small cell lung cancers. (PMID:17627612)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | erbb3a | ENSDARG00000006202 |
| danio_rerio | erbb3b | ENSDARG00000036993 |
| mus_musculus | Erbb3 | ENSMUSG00000018166 |
| rattus_norvegicus | Erbb3 | ENSRNOG00000004964 |
Paralogs (53): INSRR (ENSG00000027644), MUSK (ENSG00000030304), FLT4 (ENSG00000037280), EPHA3 (ENSG00000044524), ROS1 (ENSG00000047936), LTK (ENSG00000062524), TIE1 (ENSG00000066056), FGFR2 (ENSG00000066468), FGFR3 (ENSG00000068078), EPHA8 (ENSG00000070886), FGFR1 (ENSG00000077782), EPHA6 (ENSG00000080224), TYRO3 (ENSG00000092445), FLT1 (ENSG00000102755), MET (ENSG00000105976), EPHB6 (ENSG00000106123), PDGFRB (ENSG00000113721), EPHA4 (ENSG00000116106), TEK (ENSG00000120156), FLT3 (ENSG00000122025), KDR (ENSG00000128052), EPHB2 (ENSG00000133216), PDGFRA (ENSG00000134853), EPHA7 (ENSG00000135333), IGF1R (ENSG00000140443), NTRK3 (ENSG00000140538), ERBB2 (ENSG00000141736), EPHA2 (ENSG00000142627), EPHA5 (ENSG00000145242), EGFR (ENSG00000146648), EPHA1 (ENSG00000146904), NTRK2 (ENSG00000148053), MERTK (ENSG00000153208), EPHB1 (ENSG00000154928), KIT (ENSG00000157404), FGFR4 (ENSG00000160867), DDR2 (ENSG00000162733), RYK (ENSG00000163785), MST1R (ENSG00000164078), LMTK2 (ENSG00000164715)
Protein
Protein identifiers
Receptor tyrosine-protein kinase erbB-3 — P21860 (reviewed: P21860)
Alternative names: Proto-oncogene-like protein c-ErbB-3, Tyrosine kinase-type cell surface receptor HER3
All UniProt accessions (9): P21860, A0A2R8Y6T4, B3KWG5, B4DGQ7, F8VRI5, F8VRL0, F8VW48, F8VYK4, O75812
UniProt curated annotations — full annotation on UniProt →
Function. Tyrosine-protein kinase that plays an essential role as cell surface receptor for neuregulins. Binds to neuregulin-1 (NRG1) and is activated by it; ligand-binding increases phosphorylation on tyrosine residues and promotes its association with the p85 subunit of phosphatidylinositol 3-kinase. May also be activated by CSPG5. Involved in the regulation of myeloid cell differentiation.
Subunit / interactions. Monomer and homodimer. Heterodimer with each of the other ERBB receptors (Potential). Interacts with CSPG5. Interacts with GRB7. Interacts with MUC1. Interacts with MYOC. Interacts with isoform 2 of PA2G4. Found in a ternary complex with NRG1 and ITGAV:ITGB3 or ITGA6:ITGB4.
Subcellular location. Cell membrane Secreted.
Tissue specificity. Epithelial tissues and brain.
Post-translational modifications. Autophosphorylated. Ligand-binding increases phosphorylation on tyrosine residues and promotes its association with the p85 subunit of phosphatidylinositol 3-kinase.
Disease relevance. Lethal congenital contracture syndrome 2 (LCCS2) [MIM:607598] A form of lethal congenital contracture syndrome, an autosomal recessive disorder characterized by degeneration of anterior horn neurons, extreme skeletal muscle atrophy, and congenital non-progressive joint contractures (arthrogryposis). The contractures can involve the upper or lower limbs and/or the vertebral column, leading to various degrees of flexion or extension limitations evident at birth. LCCS2 patients manifest craniofacial/ocular findings, lack of hydrops, multiple pterygia, and fractures, as well as a normal duration of pregnancy and a unique feature of a markedly distended urinary bladder (neurogenic bladder defect). The phenotype suggests a spinal cord neuropathic etiology. The disease is caused by variants affecting the gene represented in this entry. Erythroleukemia, familial (FERLK) [MIM:133180] An autosomal dominant myeloproliferative disorder characterized by neoplastic proliferation of erythroblastic and myeloblastic elements with atypical erythroblasts and myeloblasts in the peripheral blood. Disease penetrance is incomplete. Disease susceptibility may be associated with variants affecting the gene represented in this entry. Visceral neuropathy, familial, 1, autosomal recessive (VSCN1) [MIM:243180] An autosomal recessive disorder characterized by intestinal dysmotility due to aganglionosis (Hirschsprung disease), hypoganglionosis, and/or chronic intestinal pseudoobstruction. Additional variable features are progressive peripheral neuropathy, arthrogryposis, hypoplasia or aplasia of the olfactory bulb and of the external auditory canals, microtia or anotia, and facial dysmorphism. Some patients present structural cardiac anomalies and arthrogryposis with multiple pterygia. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The cytoplasmic part of the receptor may interact with the SH2 or SH3 domains of many signal-transducing proteins.
Similarity. Belongs to the protein kinase superfamily. Tyr protein kinase family. EGF receptor subfamily.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P21860-1 | 1, long form | yes |
| P21860-2 | 2, short form | |
| P21860-3 | 3 | |
| P21860-4 | 4 | |
| P21860-5 | 5 |
RefSeq proteins (2): NP_001005915, NP_001973* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000494 | Rcpt_L-dom | Domain |
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR006211 | Furin-like_Cys-rich_dom | Domain |
| IPR006212 | Furin_repeat | Repeat |
| IPR009030 | Growth_fac_rcpt_cys_sf | Homologous_superfamily |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR016245 | Tyr_kinase_EGF/ERB/XmrK_rcpt | Family |
| IPR032778 | GF_recep_IV | Domain |
| IPR036941 | Rcpt_L-dom_sf | Homologous_superfamily |
| IPR050122 | RTK | Family |
Pfam: PF00757, PF01030, PF07714, PF14843
Enzyme classification (BRENDA):
- EC 2.7.10.1 — receptor protein-tyrosine kinase (BRENDA: 44 organisms, 214 substrates, 574 inhibitors, 11 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
4 substrates with measured Km, best-characterized 4. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0011–0.129 | 4 |
| AC-DYFE-6-CHLORO-W-NHME | 0.0051 | 1 |
| AC-DYFGW-NHME | 0.07 | 1 |
| YFEW | 0.232 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+) (RHEA:10596)
UniProt features (185 total): strand 61, helix 33, disulfide bond 23, sequence variant 19, turn 10, glycosylation site 10, splice variant 6, sequence conflict 5, binding site 4, modified residue 2, topological domain 2, region of interest 2, mutagenesis site 2, signal peptide 1, chain 1, transmembrane region 1, domain 1, compositionally biased region 1, active site 1
Structure
Experimental structures (PDB)
23 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7BHF | X-RAY DIFFRACTION | 2 |
| 7BHE | X-RAY DIFFRACTION | 2.3 |
| 7D85 | X-RAY DIFFRACTION | 2.5 |
| 6OP9 | X-RAY DIFFRACTION | 2.5 |
| 1M6B | X-RAY DIFFRACTION | 2.6 |
| 4LEO | X-RAY DIFFRACTION | 2.64 |
| 3KEX | X-RAY DIFFRACTION | 2.8 |
| 3LMG | X-RAY DIFFRACTION | 2.8 |
| 9I1Q | X-RAY DIFFRACTION | 2.8 |
| 7MN5 | ELECTRON MICROSCOPY | 2.93 |
| 8YRY | ELECTRON MICROSCOPY | 2.93 |
| 4RIY | X-RAY DIFFRACTION | 2.98 |
| 6KBI | X-RAY DIFFRACTION | 3 |
| 7MN6 | ELECTRON MICROSCOPY | 3.09 |
| 4RIW | X-RAY DIFFRACTION | 3.1 |
| 4RIX | X-RAY DIFFRACTION | 3.1 |
| 5CUS | X-RAY DIFFRACTION | 3.2 |
| 4P59 | X-RAY DIFFRACTION | 3.4 |
| 5O4O | X-RAY DIFFRACTION | 3.4 |
| 7MN8 | ELECTRON MICROSCOPY | 3.45 |
| 3P11 | X-RAY DIFFRACTION | 3.7 |
| 5O7P | X-RAY DIFFRACTION | 4.5 |
| 2L9U | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P21860-F1 | 72.90 | 0.48 |
Antibody-complex structures (SAbDab): 10 — 3P11, 4LEO, 4P59, 5CUS, 5O4O, 5O7P, 7D85, 7MN8, 8YRY, 9I1Q
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 834 (proton acceptor)
Ligand- & substrate-binding residues (4): 715–723; 742; 788–790; 834–839
Post-translational modifications (2): 686, 982
Disulfide bonds (23): 29–56, 156–183, 186–194, 190–202, 210–218, 214–226, 227–235, 231–243, 246–255, 259–286, 290–301, 305–320, 323–327, 500–509, 504–517, 520–529, 533–549, 552–565, 556–573, 576–585 …
Glycosylation sites (10): 126, 250, 353, 408, 414, 437, 469, 522, 566, 616
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 742 | strongly reduced autophosphorylation. |
| 868 | strongly reduced tyrosine phosphorylation. |
Function
Pathways and Gene Ontology
Reactome pathways
15 pathways
| ID | Pathway |
|---|---|
| R-HSA-1227986 | Signaling by ERBB2 |
| R-HSA-1236394 | Signaling by ERBB4 |
| R-HSA-1250196 | SHC1 events in ERBB2 signaling |
| R-HSA-1257604 | PIP3 activates AKT signaling |
| R-HSA-1306955 | GRB7 events in ERBB2 signaling |
| R-HSA-1358803 | Downregulation of ERBB2:ERBB3 signaling |
| R-HSA-1963642 | PI3K events in ERBB2 signaling |
| R-HSA-2219530 | Constitutive Signaling by Aberrant PI3K in Cancer |
| R-HSA-5673001 | RAF/MAP kinase cascade |
| R-HSA-6785631 | ERBB2 Regulates Cell Motility |
| R-HSA-6811558 | PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling |
| R-HSA-8847993 | ERBB2 Activates PTK6 Signaling |
| R-HSA-8863795 | Downregulation of ERBB2 signaling |
| R-HSA-9664565 | Signaling by ERBB2 KD Mutants |
| R-HSA-9665686 | Signaling by ERBB2 TMD/JMD mutants |
MSigDB gene sets: 550 (showing top):
GOBP_NEUROMUSCULAR_JUNCTION_DEVELOPMENT, GOBP_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOBP_REGULATION_OF_CALCIUM_MEDIATED_SIGNALING, GOBP_REGULATION_OF_CARDIAC_MUSCLE_TISSUE_DEVELOPMENT, GOBP_ENDOCARDIAL_CUSHION_DEVELOPMENT, GCANCTGNY_MYOD_Q6, AREB6_03, ASTON_MAJOR_DEPRESSIVE_DISORDER_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GOBP_GLIAL_CELL_DEVELOPMENT, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, MCBRYAN_PUBERTAL_TGFB1_TARGETS_DN, GOBP_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, GOBP_NEUROGENESIS
GO Biological Process (33): endocardial cushion development (GO:0003197), negative regulation of cell adhesion (GO:0007162), signal transduction (GO:0007165), cell surface receptor protein tyrosine kinase signaling pathway (GO:0007169), epidermal growth factor receptor signaling pathway (GO:0007173), peripheral nervous system development (GO:0007422), heart development (GO:0007507), negative regulation of signal transduction (GO:0009968), positive regulation of gene expression (GO:0010628), Schwann cell differentiation (GO:0014037), Schwann cell development (GO:0014044), cranial nerve development (GO:0021545), neuron differentiation (GO:0030182), ERBB2-ERBB3 signaling pathway (GO:0038133), wound healing (GO:0042060), regulation of cell population proliferation (GO:0042127), myelination (GO:0042552), negative regulation of apoptotic process (GO:0043066), positive regulation of MAPK cascade (GO:0043410), phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491), negative regulation of neuron apoptotic process (GO:0043524), positive regulation of epithelial cell proliferation (GO:0050679), negative regulation of secretion (GO:0051048), neuron apoptotic process (GO:0051402), positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0051897), positive regulation of cardiac muscle tissue development (GO:0055025), positive regulation of calcineurin-NFAT signaling cascade (GO:0070886), motor neuron apoptotic process (GO:0097049), extrinsic apoptotic signaling pathway in absence of ligand (GO:0097192), negative regulation of motor neuron apoptotic process (GO:2000672), protein phosphorylation (GO:0006468), cell development (GO:0048468), regulation of developmental process (GO:0050793)
GO Molecular Function (18): protein kinase activity (GO:0004672), transmembrane signaling receptor activity (GO:0004888), ATP binding (GO:0005524), growth factor binding (GO:0019838), protein tyrosine kinase activator activity (GO:0030296), ubiquitin protein ligase binding (GO:0031625), neuregulin receptor activity (GO:0038131), neuregulin binding (GO:0038132), identical protein binding (GO:0042802), ErbB-3 class receptor binding (GO:0043125), protein heterodimerization activity (GO:0046982), nucleotide binding (GO:0000166), protein tyrosine kinase activity (GO:0004713), transmembrane receptor protein tyrosine kinase activity (GO:0004714), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), signaling receptor activity (GO:0038023)
GO Cellular Component (11): obsolete extracellular space (GO:0005615), plasma membrane (GO:0005886), basal plasma membrane (GO:0009925), basolateral plasma membrane (GO:0016323), apical plasma membrane (GO:0016324), lateral plasma membrane (GO:0016328), ERBB3:ERBB2 complex (GO:0038143), signaling receptor complex (GO:0043235), extracellular region (GO:0005576), endomembrane system (GO:0012505), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Signaling by ERBB2 | 6 |
| Signaling by Receptor Tyrosine Kinases | 2 |
| Signaling by ERBB2 in Cancer | 2 |
| Intracellular signaling by second messengers | 1 |
| Downregulation of ERBB2 signaling | 1 |
| PI3K/AKT Signaling in Cancer | 1 |
| MAPK1/MAPK3 signaling | 1 |
| Negative regulation of the PI3K/AKT network | 1 |
| Signaling by PTK6 | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| plasma membrane region | 3 |
| regulation of cellular process | 2 |
| protein binding | 2 |
| protein tyrosine kinase activity | 2 |
| plasma membrane | 2 |
| heart development | 1 |
| mesenchyme development | 1 |
| cell adhesion | 1 |
| regulation of cell adhesion | 1 |
| negative regulation of cellular process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| cellular response to stimulus | 1 |
| enzyme-linked receptor protein signaling pathway | 1 |
| ERBB signaling pathway | 1 |
| nervous system development | 1 |
| system development | 1 |
| animal organ development | 1 |
| circulatory system development | 1 |
| signal transduction | 1 |
| regulation of signal transduction | 1 |
| negative regulation of cell communication | 1 |
| negative regulation of signaling | 1 |
| negative regulation of response to stimulus | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| peripheral nervous system development | 1 |
| glial cell differentiation | 1 |
| Schwann cell differentiation | 1 |
| glial cell development | 1 |
| nerve development | 1 |
| cell differentiation | 1 |
| generation of neurons | 1 |
| ERBB2 signaling pathway | 1 |
| ERBB3 signaling pathway | 1 |
| response to wounding | 1 |
| tissue regeneration | 1 |
Protein interactions and networks
STRING
3640 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ERBB3 | NRG1 | P98202 | 999 |
| ERBB3 | EGF | P01133 | 998 |
| ERBB3 | NRG2 | O14511 | 998 |
| ERBB3 | HBEGF | Q99075 | 986 |
| ERBB3 | EGFR | P00533 | 984 |
| ERBB3 | ERBB2 | P04626 | 984 |
| ERBB3 | ERBB4 | Q15303 | 983 |
| ERBB3 | PA2G4 | Q9UQ80 | 983 |
| ERBB3 | TGFA | P01135 | 982 |
| ERBB3 | AREG | P15514 | 981 |
| ERBB3 | SHC1 | P29353 | 976 |
| ERBB3 | GRB2 | P29354 | 976 |
| ERBB3 | NRG4 | Q8WWG1 | 968 |
| ERBB3 | BTC | P35070 | 960 |
| ERBB3 | EREG | O14944 | 952 |
IntAct
383 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ERBB2 | ERBB3 | psi-mi:“MI:0915”(physical association) | 0.970 |
| ERBB3 | ERBB2 | psi-mi:“MI:0915”(physical association) | 0.970 |
| ERBB3 | ERBB2 | psi-mi:“MI:0914”(association) | 0.970 |
| ERBB2 | ERBB3 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| ERBB2 | ERBB3 | psi-mi:“MI:0914”(association) | 0.970 |
| ERBB2 | EGFR | psi-mi:“MI:0914”(association) | 0.950 |
| EGFR | ERBB3 | psi-mi:“MI:0915”(physical association) | 0.920 |
| PIK3R1 | ERBB3 | psi-mi:“MI:0915”(physical association) | 0.920 |
BioGRID (488): ERBB3 (Affinity Capture-MS), HLA-DPA1 (Affinity Capture-MS), UQCR10 (Affinity Capture-MS), B3GALTL (Affinity Capture-MS), PDF (Affinity Capture-MS), TUBA4A (Affinity Capture-MS), TUBB8 (Affinity Capture-MS), HLA-A (Affinity Capture-MS), YBEY (Affinity Capture-MS), SLC31A1 (Affinity Capture-MS), EIF1AX (Affinity Capture-MS), ERBB3 (Biochemical Activity), ERBB2 (Co-localization), HLA-A (Affinity Capture-MS), HLA-B (Affinity Capture-MS)
ESM2 similar proteins: A4IIY1, A5PK27, E7FAM5, O94806, O94844, P21860, P42694, P50747, P97711, Q15139, Q1PSW8, Q2TBA3, Q2YDF9, Q496Y0, Q4KLT0, Q5BIM1, Q5RB22, Q5RFV4, Q5XIS9, Q60553, Q62101, Q62921, Q6DDJ3, Q6DFV5, Q6DH94, Q6DJB3, Q6DLV9, Q6NYU2, Q6PFY8, Q7T0P6, Q7Z419, Q80WC9, Q8BKD6, Q8BWW9, Q8BZ03, Q8HXH0, Q8K1Y2, Q8R023, Q91009, Q920N2
Diamond homologs: A0M8R7, A0M8S8, O08680, O13146, O18735, O35346, O54967, O73875, O73878, P00519, P00520, P00521, P00533, P00534, P00535, P04412, P04626, P06494, P07949, P09759, P0CY46, P10447, P11273, P13387, P13388, P16056, P21860, P24348, P28693, P29317, P29318, P29319, P29320, P29323, P34152, P42684, P53356, P54755, P54756, P54757
SIGNOR signaling
25 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ERBB3 | up-regulates | GRB2 | binding |
| ERBB3 | “up-regulates quantity by expression” | AR | “transcriptional regulation” |
| LRIG1 | down-regulates | ERBB3 | ubiquitination |
| ERBB3 | up-regulates | PIK3CA | binding |
| ERBB3 | up-regulates | PIK3CB | binding |
| ERBB3 | up-regulates | PIK3CD | binding |
| ERBB3 | up-regulates | PIK3CG | binding |
| EREG | up-regulates | ERBB3 | binding |
| sapitinib | down-regulates | ERBB3 | “chemical inhibition” |
| ERBB3 | up-regulates | PI3K | binding |
| TWIST2 | “down-regulates quantity by repression” | ERBB3 | “transcriptional regulation” |
| NRG1 | up-regulates | ERBB3 | binding |
| NRG2 | up-regulates | ERBB3 | binding |
| RNF41 | “down-regulates quantity by destabilization” | ERBB3 | polyubiquitination |
| ERBB2 | “up-regulates activity” | ERBB3 | phosphorylation |
| ROR1 | “up-regulates activity” | ERBB3 | phosphorylation |
| EGFR | up-regulates | ERBB3 | phosphorylation |
| ERBB2 | up-regulates | ERBB3 | binding |
| CDK5 | “up-regulates activity” | ERBB3 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 123 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| PI3K events in ERBB2 signaling | 6 | 50.4× | 2e-07 |
| GAB1 signalosome | 5 | 39.6× | 7e-06 |
| Signaling by ALK | 5 | 35.7× | 1e-05 |
| Downregulation of ERBB2 signaling | 7 | 33.3× | 2e-07 |
| Signaling by ERBB2 KD Mutants | 6 | 31.7× | 2e-06 |
| Signaling by ERBB2 | 7 | 30.3× | 2e-07 |
| SHC1 events in ERBB2 signaling | 5 | 29.7× | 3e-05 |
| Downstream signal transduction | 6 | 28.6× | 4e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| peptidyl-tyrosine dephosphorylation | 5 | 40.0× | 2e-05 |
| phosphatidylinositol dephosphorylation | 6 | 35.0× | 6e-06 |
| protein dephosphorylation | 13 | 26.0× | 3e-12 |
| peptidyl-tyrosine phosphorylation | 6 | 22.8× | 4e-05 |
| cellular response to epidermal growth factor stimulus | 7 | 20.1× | 1e-05 |
| epidermal growth factor receptor signaling pathway | 8 | 17.9× | 6e-06 |
| phosphatidylinositol 3-kinase/protein kinase B signal transduction | 7 | 13.3× | 1e-04 |
| positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | 9 | 6.4× | 1e-03 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: activating (oncogene-like) across 11 cancer types — BLCA, BRCA, CESC, CHOL, COADREAD, NBL, PRAD, STAD, UCEC, UCS, UTUC.
Clinical variants and AI predictions
ClinVar
247 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 7 |
| Likely pathogenic | 15 |
| Uncertain significance | 89 |
| Likely benign | 50 |
| Benign | 37 |
Top pathogenic / likely-pathogenic (22)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1188813 | NM_001982.4(ERBB3):c.3297del (p.His1100fs) | Pathogenic |
| 2572087 | NM_001982.4(ERBB3):c.1914-7C>G | Pathogenic |
| 2572088 | NM_001982.4(ERBB3):c.2942_2945del | Pathogenic |
| 2582246 | NM_001982.4(ERBB3):c.307C>T (p.Arg103Cys) | Pathogenic |
| 2582247 | NM_001982.4(ERBB3):c.2782G>A (p.Glu928Lys) | Pathogenic |
| 2582287 | NM_001982.4(ERBB3):c.180G>A (p.Met60Ile) | Pathogenic |
| 376410 | NM_001982.4(ERBB3):c.310G>A (p.Val104Met) | Pathogenic |
| 1188814 | NM_001982.4(ERBB3):c.2359A>C (p.Thr787Pro) | Likely pathogenic |
| 1188815 | NM_001982.4(ERBB3):c.2695G>A (p.Val899Met) | Likely pathogenic |
| 12572 | NM_001982.4(ERBB3):c.1184-9A>G | Likely pathogenic |
| 2627242 | NM_001982.4(ERBB3):c.3202-2A>G | Likely pathogenic |
| 2628640 | NM_001982.4(ERBB3):c.1330C>T (p.Arg444Ter) | Likely pathogenic |
| 2631098 | NM_001982.4(ERBB3):c.1881_1891del (p.Asp628fs) | Likely pathogenic |
| 3574998 | NM_001982.4(ERBB3):c.83-2A>G | Likely pathogenic |
| 3574999 | NM_001982.4(ERBB3):c.237G>A (p.Trp79Ter) | Likely pathogenic |
| 3575000 | NM_001982.4(ERBB3):c.3223del (p.Ser1075fs) | Likely pathogenic |
| 374608 | NM_001982.4(ERBB3):c.2274+1G>A | Likely pathogenic |
| 3764552 | NM_001982.4(ERBB3):c.234+2T>C | Likely pathogenic |
| 4293323 | NM_001982.4(ERBB3):c.874+1G>A | Likely pathogenic |
| 4805825 | NM_001982.4(ERBB3):c.547_547+2del | Likely pathogenic |
| 4845779 | NM_001982.4(ERBB3):c.2442G>A (p.Trp814Ter) | Likely pathogenic |
| 978710 | NM_001982.4(ERBB3):c.1253T>C (p.Ile418Thr) | Likely pathogenic |
SpliceAI
4325 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:56083748:CAGTG:C | acceptor_loss | 1.0000 |
| 12:56083749:A:AG | acceptor_gain | 1.0000 |
| 12:56083750:G:GA | acceptor_gain | 1.0000 |
| 12:56083750:GT:G | acceptor_gain | 1.0000 |
| 12:56083750:GTGT:G | acceptor_gain | 1.0000 |
| 12:56083899:GCAG:G | donor_gain | 1.0000 |
| 12:56083900:CAGGT:C | donor_loss | 1.0000 |
| 12:56084976:A:AG | acceptor_gain | 1.0000 |
| 12:56084977:T:G | acceptor_gain | 1.0000 |
| 12:56084978:A:AG | acceptor_gain | 1.0000 |
| 12:56084978:AATCT:A | acceptor_gain | 1.0000 |
| 12:56084982:T:TA | acceptor_gain | 1.0000 |
| 12:56084993:A:AG | acceptor_gain | 1.0000 |
| 12:56084993:AGTG:A | acceptor_gain | 1.0000 |
| 12:56084994:G:GG | acceptor_gain | 1.0000 |
| 12:56084994:GT:G | acceptor_gain | 1.0000 |
| 12:56084994:GTGG:G | acceptor_gain | 1.0000 |
| 12:56085099:G:GT | donor_gain | 1.0000 |
| 12:56085268:C:G | donor_gain | 1.0000 |
| 12:56086378:G:GT | donor_gain | 1.0000 |
| 12:56086529:A:AG | acceptor_gain | 1.0000 |
| 12:56086530:G:GG | acceptor_gain | 1.0000 |
| 12:56086530:GA:G | acceptor_gain | 1.0000 |
| 12:56086652:AAGCT:A | donor_gain | 1.0000 |
| 12:56086654:GCT:G | donor_gain | 1.0000 |
| 12:56086655:CT:C | donor_gain | 1.0000 |
| 12:56086657:G:GG | donor_gain | 1.0000 |
| 12:56087638:GACAT:G | donor_gain | 1.0000 |
| 12:56087791:A:AG | acceptor_gain | 1.0000 |
| 12:56087791:ATAGT:A | acceptor_gain | 1.0000 |
AlphaMissense
8783 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:56083759:G:T | G31W | 1.000 |
| 12:56083835:G:A | C56Y | 1.000 |
| 12:56083856:T:A | L63H | 1.000 |
| 12:56083856:T:C | L63P | 1.000 |
| 12:56085013:G:T | G85C | 1.000 |
| 12:56085014:G:T | G85V | 1.000 |
| 12:56085023:T:C | L88P | 1.000 |
| 12:56085036:T:A | N92K | 1.000 |
| 12:56085036:T:G | N92K | 1.000 |
| 12:56085126:C:A | N122K | 1.000 |
| 12:56085126:C:G | N122K | 1.000 |
| 12:56086565:C:A | N152K | 1.000 |
| 12:56086565:C:G | N152K | 1.000 |
| 12:56086598:G:C | W163C | 1.000 |
| 12:56086598:G:T | W163C | 1.000 |
| 12:56087614:G:C | W195C | 1.000 |
| 12:56087614:G:T | W195C | 1.000 |
| 12:56088144:T:A | C286S | 1.000 |
| 12:56088144:T:C | C286R | 1.000 |
| 12:56088145:G:C | C286S | 1.000 |
| 12:56088156:T:A | C290S | 1.000 |
| 12:56088156:T:C | C290R | 1.000 |
| 12:56088157:G:C | C290S | 1.000 |
| 12:56088569:T:A | C301S | 1.000 |
| 12:56088569:T:C | C301R | 1.000 |
| 12:56088570:G:A | C301Y | 1.000 |
| 12:56088570:G:C | C301S | 1.000 |
| 12:56088571:T:G | C301W | 1.000 |
| 12:56088581:T:A | C305S | 1.000 |
| 12:56088581:T:C | C305R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000186509 (12:56092116 G>A), RS1000237251 (12:56092473 G>GTTA), RS1000398584 (12:56086385 T>C), RS1000415301 (12:56093841 T>A,G), RS1000451758 (12:56088487 G>A,T), RS1000586707 (12:56088920 G>A), RS1000923648 (12:56079628 T>G), RS1001350403 (12:56080123 T>A,G), RS1001510680 (12:56095933 C>T), RS1001517553 (12:56081222 C>T), RS1001575378 (12:56080811 G>A,C,T), RS1001683349 (12:56079785 AGT>A), RS1001747838 (12:56100840 T>C), RS1001854934 (12:56095151 A>G), RS1001897990 (12:56095543 A>C,T)
Disease associations
OMIM: gene MIM:190151 | disease phenotypes: MIM:133180, MIM:607598, MIM:243180, MIM:109800, MIM:253310
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| lethal congenital contracture syndrome 2 | Strong | Autosomal recessive |
| visceral neuropathy, familial, 1, autosomal recessive | Strong | Autosomal recessive |
| Hirschsprung disease | Supportive | Autosomal dominant |
Mondo (8): erythroleukemia, familial, susceptibility to (MONDO:0007573), lethal congenital contracture syndrome 2 (MONDO:0011868), visceral neuropathy, familial, 1, autosomal recessive (MONDO:8000011), visceral neuropathy, familial (MONDO:0023961), prostate cancer (MONDO:0008315), urinary bladder cancer (MONDO:0001187), lethal congenital contracture syndrome 1 (MONDO:0009670), Hirschsprung disease (MONDO:0018309)
Orphanet (6): Lethal congenital contracture syndrome type 2 (Orphanet:137776), Acute erythroid leukemia (Orphanet:318), Neuronal intestinal pseudoobstruction (Orphanet:99811), Familial prostate cancer (Orphanet:1331), Lethal congenital contracture syndrome type 1 (Orphanet:1486), NON RARE IN EUROPE: Bladder cancer (Orphanet:157980)
HPO phenotypes
59 total (30 of 59 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000126 | Hydronephrosis |
| HP:0000347 | Micrognathia |
| HP:0000365 | Hearing impairment |
| HP:0000413 | Atresia of the external auditory canal |
| HP:0000508 | Ptosis |
| HP:0000969 | Edema |
| HP:0001260 | Dysarthria |
| HP:0001284 | Areflexia |
| HP:0001510 | Growth delay |
| HP:0001531 | Failure to thrive in infancy |
| HP:0001558 | Decreased fetal movement |
| HP:0001561 | Polyhydramnios |
| HP:0001629 | Ventricular septal defect |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001744 | Splenomegaly |
| HP:0001824 | Weight loss |
| HP:0001873 | Thrombocytopenia |
| HP:0001903 | Anemia |
| HP:0001909 | Leukemia |
| HP:0002013 | Vomiting |
| HP:0002014 | Diarrhea |
| HP:0002017 | Nausea and vomiting |
| HP:0002019 | Constipation |
| HP:0002027 | Abdominal pain |
| HP:0002066 | Gait ataxia |
| HP:0002240 | Hepatomegaly |
| HP:0002251 | Aganglionic megacolon |
| HP:0002253 | Colonic diverticula |
GWAS associations
28 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000038_4 | Type 1 diabetes | 2.000000e-20 |
| GCST000043_4 | Type 1 diabetes | 1.000000e-11 |
| GCST000141_1 | Type 1 diabetes | 9.000000e-10 |
| GCST000258_9 | Type 1 diabetes | 3.000000e-16 |
| GCST000392_2 | Type 1 diabetes | 2.000000e-25 |
| GCST001191_6 | Type 1 diabetes | 3.000000e-27 |
| GCST001670_1 | Vitiligo | 8.000000e-12 |
| GCST001762_469 | Obesity-related traits | 5.000000e-07 |
| GCST002774_24 | Cognitive function | 3.000000e-07 |
| GCST003144_7 | Polycystic ovary syndrome | 2.000000e-07 |
| GCST003988_25 | Hypothyroidism | 8.000000e-08 |
| GCST004367_1 | Anorexia nervosa | 4.000000e-09 |
| GCST004866_11 | Alopecia areata | 4.000000e-09 |
| GCST007563_23 | Allergic disease (asthma, hay fever or eczema) | 4.000000e-10 |
| GCST007564_9 | Asthma or allergic disease (pleiotropy) | 1.000000e-13 |
| GCST007603_18 | Smoking initiation | 3.000000e-08 |
| GCST007798_148 | Asthma | 8.000000e-25 |
| GCST007799_4 | Asthma (adult onset) | 4.000000e-15 |
| GCST008916_124 | Asthma | 1.000000e-16 |
| GCST009524_114 | Household income (MTAG) | 3.000000e-08 |
| GCST009798_45 | Asthma | 1.000000e-15 |
| GCST009875_4 | Type 1 diabetes | 1.000000e-18 |
| GCST010002_217 | Refractive error | 6.000000e-174 |
| GCST010571_56 | Autoimmune thyroid disease | 2.000000e-11 |
| GCST010703_297 | Brain morphology (MOSTest) | 4.000000e-10 |
| GCST011156_1 | Body mass index | 1.000000e-08 |
| GCST011703_9 | Smoking initiation | 2.000000e-08 |
| GCST90000047_182 | Age at first sexual intercourse | 8.000000e-10 |
EFO canonical traits (8, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004626 | IGFBP-3 measurement |
| EFO:0004337 | intelligence |
| EFO:0005670 | smoking initiation |
| EFO:1002011 | adult onset asthma |
| EFO:0009695 | household income |
| EFO:0004346 | neuroimaging measurement |
| EFO:0004340 | body mass index |
| EFO:0009749 | age at first sexual intercourse measurement |
MeSH disease descriptors (6)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D006627 | Hirschsprung Disease | C06.198.439; C06.405.469.158.701.439; C16.131.314.439 |
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
| C565039 | Erythroleukemia, Familial (supp.) | |
| C564369 | Lethal Congenital Contracture Syndrome 2 (supp.) | |
| C537194 | Lethal congenital contracture syndrome 1 (supp.) | |
| C537394 | Neuronal intestinal pseudoobstruction (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (3): CHEMBL2363049 (PROTEIN FAMILY), CHEMBL4630723 (PROTEIN COMPLEX), CHEMBL5838 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
23 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 440,115 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL4650319 | MOBOCERTINIB | 4 | 929 |
| CHEMBL1173655 | AFATINIB | 4 | 15,144 |
| CHEMBL180022 | NERATINIB | 4 | 9,404 |
| CHEMBL24828 | VANDETANIB | 4 | 42,230 |
| CHEMBL288441 | BOSUTINIB | 4 | 12,255 |
| CHEMBL3353410 | OSIMERTINIB | 4 | 8,898 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL554 | LAPATINIB | 4 | 69,326 |
| CHEMBL939 | GEFITINIB | 4 | 117,814 |
| CHEMBL31965 | CANERTINIB | 3 | 8,083 |
| CHEMBL3545308 | ROCILETINIB | 3 | 1,729 |
| CHEMBL428690 | ALVOCIDIB | 3 | 27,781 |
| CHEMBL491473 | CEDIRANIB | 3 | 9,098 |
| CHEMBL545315 | CANERTINIB DIHYDROCHLORIDE | 3 | 881 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL587723 | AEE-788 | 2 | 2,697 |
| CHEMBL1230609 | FORETINIB | 2 | 3,096 |
| CHEMBL2408045 | SAPITINIB | 2 | 1,460 |
| CHEMBL3786098 | PF-06459988 | 2 | 335 |
| CHEMBL3989970 | MAVELERTINIB | 2 | |
| CHEMBL572878 | TOZASERTIB | 2 | |
| CHEMBL1614725 | TAK-285 | 1 |
Clinical evidence (CIViC)
Drug × variant × indication: 18 predictive associations from 18 curated evidence items; also 3 functional, 2 oncogenic.
| Variant | Therapy | Indication | Effect | Level | CIViC |
|---|---|---|---|---|---|
| ERBB2 Mutation OR ERBB3 Mutation | Trastuzumab + Pertuzumab | Colorectal Cancer | Sensitivity/Response | CIViC B | EID11669 |
| ERBB3 G284R | Afatinib | Transitional Cell Carcinoma | Sensitivity/Response | CIViC B | EID1748 |
| ERBB3 Overexpression | Lapatinib | Breast Cancer | Sensitivity/Response | CIViC B | EID3053 |
| ERBB3 R103G | Afatinib | Transitional Cell Carcinoma | Sensitivity/Response | CIViC B | EID1747 |
| ERBB3 V104M | Afatinib | Transitional Cell Carcinoma | Sensitivity/Response | CIViC B | EID1746 |
| ERBB3 Overexpression | Cetuximab | Colorectal Cancer | Resistance | CIViC B | EID729 |
| ERBB3 Overexpression | Trastuzumab Emtansine | Her2-receptor Positive Breast Cancer | Resistance | CIViC B | EID8707 |
| ERBB3 G284R | Lapatinib + Trastuzumab | Breast Cancer | Sensitivity/Response | CIViC C | EID7244 |
| ERBB3 EXPRESSION | Pertuzumab | Melanoma | Sensitivity/Response | CIViC D | EID3051 |
| ERBB3 EXPRESSION | Anti-ErbB3 Monoclonal Antibody AV-203 | Cancer | Sensitivity/Response | CIViC D | EID862 |
| ERBB3 EXPRESSION | 9F7-F11 + Pertuzumab | Pancreatic Ductal Adenocarcinoma | Sensitivity/Response | CIViC D | EID865 |
| ERBB3 G284R | Duligotuzumab + Trastuzumab + Pertuzumab + Lapatinib | Cancer | Sensitivity/Response | CIViC D | EID9684 |
| ERBB3 Overexpression | Selumetinib + Afatinib | Cancer | Sensitivity/Response | CIViC D | EID1152 |
| ERBB3 Overexpression | Pertuzumab | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC D | EID7804 |
| ERBB3 V104M | Pertuzumab + Trastuzumab + Lapatinib + Duligotuzumab | Cancer | Sensitivity/Response | CIViC D | EID9670 |
| ERBB3 V855A | Afatinib + Pertuzumab | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC D | EID1845 |
| ERBB3 Overexpression | Selumetinib + HER2 Inhibitor CP-724 + 714 + Gefitinib | Cancer | Resistance | CIViC D | EID1153 |
| ERBB3 Overexpression | Trametinib + Selumetinib | Uveal Melanoma | Resistance | CIViC D | EID3050 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
2 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs2229046 | Efficacy | 3 | carboplatin;docetaxel;trastuzumab | Breast Neoplasms |
| rs773123 | Efficacy | 3 | carboplatin;docetaxel;trastuzumab | Breast Neoplasms |
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs2229046 | ERBB3 | 3 | 3.00 | 1 | carboplatin;docetaxel;trastuzumab |
| rs773123 | ERBB3 | 3 | 2.50 | 1 | carboplatin;docetaxel;trastuzumab |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — Type I RTKs: ErbB (epidermal growth factor) receptor family
Most potent curated ligand interactions (10 total), top 10:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| elgemtumab | Binding | 11.4 | pKd |
| zenocutuzumab | Antagonist | 10.46 | pEC50 |
| neuregulin-1 | 9.26 | pIC50 | |
| seribantumab | Binding | 9.11 | pKd |
| patritumab deruxtecan | Binding | 9.0 | pKd |
| istiratumab | Binding | 9.0 | pKd |
| sapitinib | Inhibition | 8.4 | pIC50 |
| MM-111 | Binding | 7.81 | pKd |
| TX1-85-1 | Binding | 7.64 | pIC50 |
| TX2-121-1 | Inhibition | 7.31 | pIC50 |
Binding affinities (BindingDB)
12 measured of 12 human assays (12 total across all organisms); most potent 12 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| CHEMBL3763405 | IC50 | 4.6 nM |
| CHEMBL3763627 | IC50 | 5.4 nM |
| CHEMBL3765425 | IC50 | 5.7 nM |
| CHEMBL3765815 | IC50 | 6 nM |
| CHEMBL3763796 | IC50 | 10 nM |
| CHEMBL3763757 | IC50 | 11 nM |
| CHEMBL3765263 | IC50 | 12 nM |
| CHEMBL3764603 | IC50 | 15 nM |
| CHEMBL3764312 | IC50 | 17 nM |
| CHEMBL3763701 | IC50 | 33 nM |
| CHEMBL3764589 | IC50 | 66 nM |
| CHEMBL3765789 | IC50 | 159 nM |
ChEMBL bioactivities
152 potent at pChembl≥5 of 162 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.16 | IC50 | 0.69 | nM | CHEMBL2387001 |
| 9.11 | Kd | 0.77 | nM | BOSUTINIB |
| 9.05 | IC50 | 0.89 | nM | CHEMBL2387000 |
| 9.00 | IC50 | 1 | nM | CHEMBL3883534 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL2386999 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL4228518 |
| 8.77 | IC50 | 1.7 | nM | CHEMBL3622673 |
| 8.77 | IC50 | 1.7 | nM | CHEMBL4225777 |
| 8.72 | IC50 | 1.9 | nM | CHEMBL4226676 |
| 8.70 | IC50 | 2 | nM | AEE-788 |
| 8.70 | IC50 | 2 | nM | CHEMBL3608429 |
| 8.70 | IC50 | 2 | nM | CHEMBL4216679 |
| 8.70 | IC50 | 2 | nM | CHEMBL4226151 |
| 8.68 | IC50 | 2.1 | nM | OSIMERTINIB |
| 8.62 | IC50 | 2.4 | nM | CHEMBL4225565 |
| 8.59 | IC50 | 2.6 | nM | CHEMBL4227084 |
| 8.52 | IC50 | 3 | nM | CHEMBL3086102 |
| 8.48 | IC50 | 3.3 | nM | MOBOCERTINIB |
| 8.40 | IC50 | 4 | nM | SAPITINIB |
| 8.40 | IC50 | 4 | nM | MAVELERTINIB |
| 8.38 | IC50 | 4.2 | nM | CHEMBL4225951 |
| 8.38 | IC50 | 4.2 | nM | CHEMBL4225306 |
| 8.34 | IC50 | 4.6 | nM | CHEMBL2386998 |
| 8.30 | IC50 | 5 | nM | CHEMBL3985592 |
| 8.30 | IC50 | 5 | nM | CHEMBL3956925 |
| 8.24 | IC50 | 5.8 | nM | CHEMBL4226937 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL1923009 |
| 8.14 | IC50 | 7.2 | nM | CHEMBL1923022 |
| 8.11 | Kd | 7.7 | nM | NERATINIB |
| 8.11 | IC50 | 7.7 | nM | CHEMBL1923000 |
| 8.05 | IC50 | 9 | nM | CHEMBL3608432 |
| 8.04 | IC50 | 9.2 | nM | CHEMBL1923003 |
| 8.02 | IC50 | 9.5 | nM | CHEMBL1923006 |
| 8.00 | IC50 | 10 | nM | ERLOTINIB |
| 8.00 | IC50 | 10 | nM | CHEMBL1923019 |
| 7.85 | IC50 | 14 | nM | CANERTINIB DIHYDROCHLORIDE |
| 7.82 | IC50 | 15 | nM | CHEMBL1923010 |
| 7.82 | IC50 | 15 | nM | CHEMBL1923020 |
| 7.75 | IC50 | 18 | nM | CHEMBL4288300 |
| 7.75 | Kd | 18 | nM | DASATINIB |
| 7.75 | IC50 | 18 | nM | CHEMBL1923001 |
| 7.70 | IC50 | 20 | nM | CHEMBL3973190 |
| 7.70 | IC50 | 20 | nM | CHEMBL1922999 |
| 7.68 | IC50 | 21 | nM | PF-06459988 |
| 7.68 | IC50 | 21 | nM | CHEMBL4282460 |
| 7.66 | IC50 | 22 | nM | CHEMBL1923013 |
| 7.64 | IC50 | 23 | nM | CHEMBL5285282 |
| 7.64 | IC50 | 23 | nM | TAK-285 |
| 7.57 | IC50 | 27 | nM | CHEMBL4283970 |
| 7.57 | IC50 | 27 | nM | CHEMBL1922900 |
PubChem BioAssay actives
141 with measured affinity, of 432 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 1-[3-(4-amino-7-cyclopentylpyrrolo[2,3-d]pyrimidine-5-carbonyl)phenyl]-3-(2-methoxy-5-methylphenyl)urea | 748805: Inhibition of human EGFR extracellular domain/TIE2 intracellular domain transfected in mouse NIH/3T3 cells assessed as phosphotyrosine level preincubated for 60 mins followed by EGF stimulation by DELFIA assay | ic50 | 0.0007 | uM |
| Bosutinib | 624851: Binding constant for ERBB3 kinase domain | kd | 0.0008 | uM |
| 1-[3-(4-amino-7-cyclopentylpyrrolo[2,3-d]pyrimidine-5-carbonyl)phenyl]-3-(2-fluoro-5-methylphenyl)urea | 748805: Inhibition of human EGFR extracellular domain/TIE2 intracellular domain transfected in mouse NIH/3T3 cells assessed as phosphotyrosine level preincubated for 60 mins followed by EGF stimulation by DELFIA assay | ic50 | 0.0009 | uM |
| N-[4-(3-chloro-4-fluoroanilino)-7-methoxyquinazolin-6-yl]prop-2-enamide | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0010 | uM |
| N-[4-[2-(dimethylamino)ethoxy]phenyl]-8-(4-fluorophenyl)sulfanyl-9-(oxan-4-yl)purin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0012 | uM |
| 1-[3-(4-amino-7-cyclopentylpyrrolo[2,3-d]pyrimidine-5-carbonyl)phenyl]-3-(2,4-dichlorophenyl)urea | 748805: Inhibition of human EGFR extracellular domain/TIE2 intracellular domain transfected in mouse NIH/3T3 cells assessed as phosphotyrosine level preincubated for 60 mins followed by EGF stimulation by DELFIA assay | ic50 | 0.0012 | uM |
| N-[4-[2-(dimethylamino)ethoxy]phenyl]-9-(oxan-4-yl)-8-phenylsulfanylpurin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0017 | uM |
| N-[4-[4-(dimethylamino)piperidin-1-yl]phenyl]-9-(oxan-4-yl)-8-phenylsulfanylpurin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0019 | uM |
| 6-[4-[(4-ethylpiperazin-1-yl)methyl]phenyl]-N-[(1R)-1-phenylethyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine | 710623: Inhibition of EGFR2 | ic50 | 0.0020 | uM |
| N-[(3R,4R)-4-fluoro-1-[6-[(3-methoxy-1-methylpyrazol-4-yl)amino]-9-propan-2-ylpurin-2-yl]pyrrolidin-3-yl]prop-2-enamide | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0020 | uM |
| N-[(3R,4R)-4-fluoro-1-[6-[(1-methylpyrazol-4-yl)amino]-9-propan-2-ylpurin-2-yl]pyrrolidin-3-yl]prop-2-enamide | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0020 | uM |
| N-[4-(4-methylpiperazin-1-yl)phenyl]-9-(oxan-4-yl)-8-phenylsulfanylpurin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0020 | uM |
| Osimertinib | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0021 | uM |
| 4-[2-[4-(4-methylpiperazin-1-yl)anilino]-8-phenylsulfanylpurin-9-yl]cyclohexan-1-ol | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0024 | uM |
| 8-(benzenesulfinyl)-N-[4-[2-(dimethylamino)ethoxy]phenyl]-9-(oxan-4-yl)purin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0026 | uM |
| 7-[3-methyl-4-(4-methylpiperazin-1-yl)anilino]-3-phenyl-1-[(3S)-1-prop-2-enoylpyrrolidin-3-yl]-4H-pyrimido[4,5-d]pyrimidin-2-one | 1053594: Inhibition of EGFR L851Q mutant (unknown origin) | ic50 | 0.0030 | uM |
| Mobocertinib | 1935456: Inhibition of mouse EGFR L858R mutant stably expressed in mouse BaF3 cells assessed as cell viability incubated for 3 days by Cell Titer-Glo assay | ic50 | 0.0033 | uM |
| 2-[4-[4-(3-chloro-2-fluoroanilino)-7-methoxyquinazolin-6-yl]oxypiperidin-1-yl]-N-methylacetamide | 1545491: Inhibition of human HER3 expressed in baculovirus/Sf21 system by ELISA | ic50 | 0.0040 | uM |
| N-[(3R,4R)-4-fluoro-1-[6-[(3-methoxy-1-methylpyrazol-4-yl)amino]-9-methylpurin-2-yl]pyrrolidin-3-yl]prop-2-enamide | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0040 | uM |
| 8-(benzenesulfinyl)-9-cyclopentyl-N-[4-(4-methylpiperazin-1-yl)phenyl]purin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0042 | uM |
| 9-cyclopentyl-N-[4-(4-methylpiperazin-1-yl)phenyl]-8-phenylsulfanylpurin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0042 | uM |
| 1-[3-(4-amino-7-cyclopentylpyrrolo[2,3-d]pyrimidine-5-carbonyl)phenyl]-3-(4-chlorophenyl)urea | 748805: Inhibition of human EGFR extracellular domain/TIE2 intracellular domain transfected in mouse NIH/3T3 cells assessed as phosphotyrosine level preincubated for 60 mins followed by EGF stimulation by DELFIA assay | ic50 | 0.0046 | uM |
| 2-[2-[4-[3-chloro-4-(3-chlorophenoxy)anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethoxy]ethanol | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0057 | uM |
| N-[4-[2-(dimethylamino)ethoxy]phenyl]-8-(3-fluorophenyl)sulfanyl-9-(oxan-4-yl)purin-2-amine | 1391282: Inhibition of EGFR L858R mutant (unknown origin) using poly (Glu, Tyr) as substrate after 40 mins by kinase-glo plus luminescence assay | ic50 | 0.0058 | uM |
| N-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethyl]-3-hydroxypropanamide;methanesulfonic acid | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0072 | uM |
| N-[3-chloro-4-[(3-fluorophenyl)methoxy]phenyl]-5H-pyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0077 | uM |
| Neratinib | 624851: Binding constant for ERBB3 kinase domain | kd | 0.0077 | uM |
| N-[(3R,4R)-1-[6-[(1,3-dimethylpyrazol-4-yl)amino]-9-propan-2-ylpurin-2-yl]-4-fluoropyrrolidin-3-yl]prop-2-enamide | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0090 | uM |
| N-[3-chloro-4-(3-chlorophenoxy)phenyl]-5-methylpyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0092 | uM |
| 2-[4-[3-chloro-4-(3-chlorophenoxy)anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethanol | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0095 | uM |
| Erlotinib | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0100 | uM |
| N-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethyl]-2-hydroxyacetamide | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0100 | uM |
| N-[4-(3-chloro-4-fluoroanilino)-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]prop-2-enamide;dihydrochloride | 2158840: Inhibition of erbB3 in human MDA-MB-453 cells assessed as reduction in heregulin-stimulated tyrosine phosphorylation | ic50 | 0.0140 | uM |
| 2-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethoxy]ethanol | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0150 | uM |
| N-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethyl]-2-hydroxy-N-methylacetamide | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0150 | uM |
| 4-N-(2,5-dimethoxyphenyl)-6-N-(3-methoxyphenyl)pyrimidine-4,6-diamine | 1420637: Inhibition of recombinant human GST-tagged EGFR L858R mutant cytoplasmic domain expressed in baculovirus expression system using FAM-labeled peptide as substrate after 10 mins by mobility shift assay | ic50 | 0.0180 | uM |
| N-(2-chloro-6-methylphenyl)-2-[[6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl]amino]-1,3-thiazole-5-carboxamide;hydrate | 624851: Binding constant for ERBB3 kinase domain | kd | 0.0180 | uM |
| N-[3-chloro-4-(pyridin-2-ylmethoxy)phenyl]-5H-pyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0180 | uM |
| N-[3-chloro-4-(3-methylphenoxy)phenyl]-5H-pyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0200 | uM |
| 5-[[6-(3-chloroanilino)pyrimidin-4-yl]amino]-5-oxopentanoic acid | 1420637: Inhibition of recombinant human GST-tagged EGFR L858R mutant cytoplasmic domain expressed in baculovirus expression system using FAM-labeled peptide as substrate after 10 mins by mobility shift assay | ic50 | 0.0210 | uM |
| 1-[(3R,4R)-3-[[5-chloro-2-[(1-methylpyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl]oxymethyl]-4-methoxypyrrolidin-1-yl]prop-2-en-1-one | 1364464: Inhibition of EGFR L858R mutant phosphorylation in human H3255 cells preincubated for 2 hrs followed by EGF stimulation for 10 mins by sandwich ELISA | ic50 | 0.0210 | uM |
| 2-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethylamino]ethanol | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0220 | uM |
| N-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethyl]-3-hydroxy-3-methylbutanamide | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0230 | uM |
| N-[5-[1-[4-(4-acetylpiperazin-1-yl)cyclohexyl]-4-aminopyrazolo[3,4-d]pyrimidin-3-yl]-2-phenoxyphenyl]prop-2-enamide | 1939980: Inhibition of HER3 (unknown origin) | ic50 | 0.0230 | uM |
| 5-[(6-morpholin-4-ylpyrimidin-4-yl)amino]-5-oxopentanoic acid | 1420637: Inhibition of recombinant human GST-tagged EGFR L858R mutant cytoplasmic domain expressed in baculovirus expression system using FAM-labeled peptide as substrate after 10 mins by mobility shift assay | ic50 | 0.0270 | uM |
| N-[3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl]-5-methylpyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0270 | uM |
| N-[3-chloro-4-(2-chlorophenoxy)phenyl]-5H-pyrrolo[3,2-d]pyrimidin-4-amine | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0270 | uM |
| 5-[[6-(3-methoxyanilino)pyrimidin-4-yl]amino]-5-oxopentanoic acid | 1420637: Inhibition of recombinant human GST-tagged EGFR L858R mutant cytoplasmic domain expressed in baculovirus expression system using FAM-labeled peptide as substrate after 10 mins by mobility shift assay | ic50 | 0.0310 | uM |
| 2-[2-[4-[3-chloro-4-[3-(trifluoromethyl)phenoxy]anilino]pyrrolo[3,2-d]pyrimidin-5-yl]ethylsulfinyl]ethanol | 632227: Inhibition of human N-terminus peptide (DYKDDDD)-tagged EGFR expressed in baculovirus infected insect cells using [gamma-32P]ATP as substrate after 60 mins by scintillation counting | ic50 | 0.0310 | uM |
| N-[4-[4-amino-1-[4-(4-methylpiperazin-1-yl)cyclohexyl]pyrazolo[3,4-d]pyrimidin-3-yl]phenyl]-7-chloro-1,3-benzoxazol-2-amine | 517320: Inhibition of EGFR L858 mutant | ic50 | 0.0315 | uM |
CTD chemical–gene interactions
112 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | increases expression, affects expression, decreases expression, affects cotreatment | 9 |
| Estradiol | decreases expression, increases reaction, affects expression, affects cotreatment | 6 |
| sodium arsenite | affects cotreatment, decreases expression, increases abundance | 5 |
| Doxorubicin | affects response to substance, decreases phosphorylation, decreases reaction, decreases expression | 5 |
| trichostatin A | affects cotreatment, increases expression, affects expression | 4 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | increases response to substance, increases expression, increases phosphorylation, affects reaction, decreases response to substance (+1 more) | 4 |
| Air Pollutants | decreases methylation, increases expression, decreases expression, increases abundance | 4 |
| Quercetin | decreases reaction, increases phosphorylation, decreases expression, decreases phosphorylation | 4 |
| Tetrachlorodibenzodioxin | decreases expression, increases expression | 4 |
| Particulate Matter | decreases expression, increases abundance, decreases methylation, increases expression | 4 |
| bisphenol A | affects methylation, decreases expression, increases expression | 3 |
| Curcumin | decreases expression, decreases activity, decreases phosphorylation, increases reaction | 3 |
| Etoposide | affects response to substance, decreases expression | 3 |
| Cyclosporine | decreases expression | 3 |
| Aflatoxin B1 | affects expression, decreases expression, increases methylation | 3 |
| entinostat | affects cotreatment, increases expression | 2 |
| Fulvestrant | decreases reaction, increases expression, increases phosphorylation, decreases expression | 2 |
| Vorinostat | affects cotreatment, increases expression | 2 |
| Lapatinib | decreases activity, decreases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Arsenic | decreases expression, increases abundance, affects cotreatment | 2 |
| Benzo(a)pyrene | decreases expression | 2 |
| Daunorubicin | decreases expression | 2 |
| Mitoxantrone | decreases expression | 2 |
| Silver | decreases expression | 2 |
| FR900359 | affects phosphorylation | 1 |
| triphenyl(phenylethynyl)phosphonium | decreases expression | 1 |
| uranyl acetate | affects expression | 1 |
| lead acetate | affects cotreatment, decreases expression | 1 |
| sodium arsenate | decreases expression, increases abundance | 1 |
ChEMBL screening assays
169 unique, capped per target: 169 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1034137 | Binding | Inhibition of EGFR E746-A750del mutant at 3 uM | Discovery of substituted 4-(pyrazol-4-yl)-phenylbenzodioxane-2-carboxamides as potent and highly selective Rho kinase (ROCK-II) inhibitors. — J Med Chem |
Cellosaurus cell lines
31 cell lines: 25 cancer cell line, 5 spontaneously immortalized cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_1184 | DV-90 | Cancer cell line | Male |
| CVCL_1406 | MFE-296 | Cancer cell line | Female |
| CVCL_1603 | NCI-N87 | Cancer cell line | Male |
| CVCL_2112 | MFE-319 | Cancer cell line | Female |
| CVCL_B8FG | Abcam HCT 116 ERBB3 KO | Cancer cell line | Male |
| CVCL_B8VC | Abcam MCF-7 ERBB3 KO | Cancer cell line | Female |
| CVCL_B9HP | Abcam A-549 ERBB3 KO | Cancer cell line | Male |
| CVCL_C9DN | NCI-N87/Cas9-hyg | Cancer cell line | Male |
| CVCL_D2TC | CHO/HER3-PA | Spontaneously immortalized cell line | Female |
| CVCL_D2TD | CHO/PA16-HER3 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
353 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02343562 | PHASE4 | UNKNOWN | Probiotics for Prophylaxis of Postoperative Hirschsprungs Associated Enterocolitis |
| NCT07186647 | PHASE4 | COMPLETED | Laparoscopic-Assisted Transanal Pull-Through for Hirschsprung Disease in Pediatric:Short and Intermediate Outcomes of Two Different Techniques |
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
Related Atlas pages
- Associated diseases: lethal congenital contracture syndrome 2, Hirschsprung disease, susceptibility to, 1, visceral neuropathy, familial, 1, autosomal recessive, colorectal carcinoma, transitional cell carcinoma, breast carcinoma, HER2 positive breast carcinoma, melanoma, cancer, pancreatic ductal adenocarcinoma, uveal melanoma
- Biomarker drugs (CIViC) (drugs whose response is associated with variants in this gene — CIViC predictive evidence, not targeting): Afatinib, Lapatinib, Cetuximab, Trastuzumab Emtansine, Pertuzumab
- Targeted by drugs: Patritumab Deruxtecan, Zenocutuzumab
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): alopecia areata, breast cancer, breast carcinoma, cancer, colorectal carcinoma, erythroleukemia, familial, susceptibility to, HER2 positive breast carcinoma, Hirschsprung disease, hypothyroidism, lethal congenital contracture syndrome 1, lethal congenital contracture syndrome 2, melanoma, non-small cell lung carcinoma, pancreatic ductal adenocarcinoma, polycystic ovary syndrome, transitional cell carcinoma, urinary bladder cancer, uveal melanoma, visceral neuropathy, familial, visceral neuropathy, familial, 1, autosomal recessive