ERBIN-DT

Summary

ERBIN-DT (ERBIN divergent transcript, HGNC:55270) is a long non-coding RNA gene on chromosome 5q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55270
Approved symbol	ERBIN-DT
Name	ERBIN divergent transcript
Location	5q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000269961
Ensembl biotype	lncRNA
Entrez	118732300
RNAcentral	URS0002A681F8 — lncRNA, 693 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000602982, ENST00000775029, ENST00000775030

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000602982 — 1 exons

Exon	Start	End
ENSE00003318889	65924629	65925135

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 91.20.

Top tissues by expression

241 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.20	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.13	gold quality
mucosa of transverse colon	UBERON:0004991	70.82	gold quality
cortical plate	UBERON:0005343	69.48	gold quality
right uterine tube	UBERON:0001302	69.41	gold quality
adenohypophysis	UBERON:0002196	68.57	gold quality
left testis	UBERON:0004533	68.52	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	68.02	gold quality
right testis	UBERON:0004534	67.88	gold quality
ganglionic eminence	UBERON:0004023	67.84	gold quality
pituitary gland	UBERON:0000007	67.79	gold quality
apex of heart	UBERON:0002098	67.59	gold quality
metanephros cortex	UBERON:0010533	67.02	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.04	gold quality
testis	UBERON:0000473	65.86	gold quality
hypothalamus	UBERON:0001898	65.84	gold quality
right lobe of thyroid gland	UBERON:0001119	65.61	gold quality
spinal cord	UBERON:0002240	65.51	gold quality
calcaneal tendon	UBERON:0003701	64.99	gold quality
left lobe of thyroid gland	UBERON:0001120	64.65	gold quality
spleen	UBERON:0002106	64.29	gold quality
left ovary	UBERON:0002119	64.14	gold quality
bone marrow cell	CL:0002092	64.06	silver quality
thyroid gland	UBERON:0002046	64.04	gold quality
putamen	UBERON:0001874	63.87	gold quality
adult mammalian kidney	UBERON:0000082	63.80	gold quality
amygdala	UBERON:0001876	63.71	gold quality
stromal cell of endometrium	CL:0002255	63.31	gold quality
left adrenal gland cortex	UBERON:0035825	63.17	gold quality
prefrontal cortex	UBERON:0000451	63.11	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.37

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.