ETNK1-DT

Summary

ETNK1-DT (ETNK1 divergent transcript, HGNC:55486) is a long non-coding RNA gene on chromosome 12p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55486
Approved symbol	ETNK1-DT
Name	ETNK1 divergent transcript
Location	12p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257023
Ensembl biotype	lncRNA
Entrez	105369691
RNAcentral	URS0000A77181 — lncRNA, 742 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000542076, ENST00000775462, ENST00000775463, ENST00000775464, ENST00000775465, ENST00000775466, ENST00000775467, ENST00000775468, ENST00000775469, ENST00000775470, ENST00000775471

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000542076 — 2 exons

Exon	Start	End
ENSE00004142360	22624681	22625131
ENSE00004142380	22609228	22609754

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 86.12.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.12	gold quality
left testis	UBERON:0004533	71.88	gold quality
right testis	UBERON:0004534	71.85	gold quality
testis	UBERON:0000473	71.28	gold quality
ventricular zone	UBERON:0003053	62.40	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.10	gold quality
skeletal muscle tissue	UBERON:0001134	55.97	gold quality
lymph node	UBERON:0000029	55.73	gold quality
endometrium	UBERON:0001295	55.15	gold quality
stromal cell of endometrium	CL:0002255	55.09	gold quality
smooth muscle tissue	UBERON:0001135	51.45	gold quality
monocyte	CL:0000576	51.18	gold quality
placenta	UBERON:0001987	50.73	gold quality
calcaneal tendon	UBERON:0003701	50.52	silver quality
blood	UBERON:0000178	50.26	silver quality
duodenum	UBERON:0002114	50.10	gold quality
islet of Langerhans	UBERON:0000006	49.58	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.50	gold quality
prefrontal cortex	UBERON:0000451	48.46	gold quality
bone marrow	UBERON:0002371	48.42	silver quality
vermiform appendix	UBERON:0001154	47.70	gold quality
muscle of leg	UBERON:0001383	47.69	gold quality
liver	UBERON:0002107	47.51	silver quality
descending thoracic aorta	UBERON:0002345	47.33	gold quality
multicellular organism	UBERON:0000468	46.92	gold quality
fallopian tube	UBERON:0003889	46.90	gold quality
hindlimb stylopod muscle	UBERON:0004252	46.54	silver quality
gall bladder	UBERON:0002110	46.41	gold quality
gastrocnemius	UBERON:0001388	46.37	gold quality
myometrium	UBERON:0001296	46.30	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.