ETS1

gene
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Also known as FLJ10768ETS-1

Summary

ETS1 (ETS proto-oncogene 1, transcription factor, HGNC:3488) is a protein-coding gene on chromosome 11q24.3, encoding Protein C-ets-1 (P14921). Transcription factor.

This gene encodes a member of the ETS family of transcription factors, which are defined by the presence of a conserved ETS DNA-binding domain that recognizes the core consensus DNA sequence GGAA/T in target genes. These proteins function either as transcriptional activators or repressors of numerous genes, and are involved in stem cell development, cell senescence and death, and tumorigenesis. Alternatively spliced transcript variants encoding different isoforms have been described for this gene.

Source: NCBI Gene 2113 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): congenital heart disease (Moderate, ClinGen) — +3 more curated relationships
  • GWAS associations: 107
  • Clinical variants (ClinVar): 48 total — 1 pathogenic, 1 likely-pathogenic
  • Phenotypes (HPO): 44
  • Transcription factor: yes — 286 downstream targets (CollecTRI)
  • MANE Select transcript: NM_001143820

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:3488
Approved symbolETS1
NameETS proto-oncogene 1, transcription factor
Location11q24.3
Locus typegene with protein product
StatusApproved
AliasesFLJ10768, ETS-1
Ensembl geneENSG00000134954
Ensembl biotypeprotein_coding
OMIM164720
Entrez2113

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 11 protein_coding, 2 protein_coding_CDS_not_defined, 1 retained_intron

ENST00000319397, ENST00000392668, ENST00000525404, ENST00000526145, ENST00000527676, ENST00000530924, ENST00000531611, ENST00000535549, ENST00000608978, ENST00000900294, ENST00000917570, ENST00000917571, ENST00000917572, ENST00000917573

RefSeq mRNA: 4 — MANE Select: NM_001143820 NM_001143820, NM_001162422, NM_001330451, NM_005238

CCDS: CCDS44767, CCDS53724, CCDS81648, CCDS8475

Canonical transcript exons

ENST00000392668 — 10 exons

ExonStartEnd
ENSE00000917323128463509128463627
ENSE00000917324128480191128480451
ENSE00000917325128484823128485071
ENSE00000917326128486069128486146
ENSE00000917327128489290128489490
ENSE00000917328128490457128490576
ENSE00002159982128458765128462576
ENSE00003590356128556291128556435
ENSE00003641042128573062128573144
ENSE00003705242128587488128587558

Expression profiles

Bgee: expression breadth ubiquitous, 263 present calls, max score 98.85.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 53.0774 / max 1288.4221, expressed in 1627 samples.

FANTOM5 promoters (10 alternative TSS)

Promoter IDTPM avgSamples expressed
12309543.05461597
1230986.25521155
1230991.8651824
1231040.8330263
1230880.3542178
1230960.2867119
1230970.218895
1231060.177593
1231050.01682
1231030.01559

Top tissues by expression

291 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
visceral pleuraUBERON:000240198.85gold quality
parietal pleuraUBERON:000240098.82gold quality
tibiaUBERON:000097998.78gold quality
epithelium of nasopharynxUBERON:000195198.77gold quality
lower lobe of lungUBERON:000894998.71gold quality
superficial temporal arteryUBERON:000161498.23gold quality
colonic epitheliumUBERON:000039798.02gold quality
pericardiumUBERON:000240797.94gold quality
vena cavaUBERON:000408797.79gold quality
lymph nodeUBERON:000002997.49gold quality
germinal epithelium of ovaryUBERON:000130497.47gold quality
granulocyteCL:000009497.29gold quality
pleuraUBERON:000097796.80gold quality
skin of hipUBERON:000155496.68gold quality
synovial jointUBERON:000221796.65gold quality
adipose tissue of abdominal regionUBERON:000780896.43gold quality
omental fat padUBERON:001041496.39gold quality
peritoneumUBERON:000235896.37gold quality
mucosa of paranasal sinusUBERON:000503096.36gold quality
gall bladderUBERON:000211096.35gold quality
saphenous veinUBERON:000731896.29gold quality
mammary ductUBERON:000176596.21gold quality
trabecular bone tissueUBERON:000248396.20gold quality
adipose tissueUBERON:000101396.02gold quality
amniotic fluidUBERON:000017396.01gold quality
spleenUBERON:000210695.96gold quality
connective tissueUBERON:000238495.89gold quality
subcutaneous adipose tissueUBERON:000219095.67gold quality
right lungUBERON:000216795.40gold quality
upper lobe of lungUBERON:000894895.39gold quality

Single-cell (SCXA)

Detected in 19 experiment(s), a significant marker in 16.

ExperimentMarker?Max mean expression
E-MTAB-10553yes1339.19
E-CURD-112yes469.18
E-MTAB-8142yes126.04
E-MTAB-9221yes50.46
E-CURD-46yes45.34
E-CURD-122yes36.50
E-HCAD-10yes31.72
E-CURD-88yes31.54
E-CURD-119yes27.76
E-MTAB-8410yes27.00
E-MTAB-8271yes15.57
E-ANND-3yes15.16
E-MTAB-9543yes14.45
E-GEOD-130148yes7.32
E-MTAB-9067yes5.18

Regulation

Is transcription factor: yes

Downstream targets (CollecTRI)

286 targets.

TargetRegulation
ABCB1Activation
ABCC1Unknown
ACEUnknown
ADAM2
AKR1B10Activation
ALG12
ANGUnknown
ANGPT2Activation
ANPEPActivation
ARHGDIBUnknown
ASAP1Unknown
ATP11C
ATP2A3Activation
ATXN2Unknown
B3GAT3Unknown
B4GALT1
B4GALT5
BAXRepression
BCL2Unknown
BCL2L1Unknown
BIDUnknown
BIRC2Unknown
BIRC3
BMP4Activation
C3AR1Activation
CA9Repression
CASP1Activation
CASP3Activation
CASP8Activation
CAT

JASPAR motifs

MotifNameFamily
MA0098.1ETS1Ets-related
MA0098.3ETS1Ets-related
MA0098.4ETS1Ets-related

JASPAR matrix evidence (PMIDs): PMID:1542566, PMID:20517297

Upstream regulators (CollecTRI, top): AP1, DAXX, ETS1, ETS2, ETV4, ETV7, FOS, GLI3, HIF1A, JUN, NFE2L2, NFKB, NR3C1, POU2F1, POU2F2, RARA, RXRA, SP100, SP1, TFAP2A, TOX2, TP53, WT1, XRCC5

miRNA regulators (miRDB)

246 targeting ETS1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-8485100.0077.574731
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-3924100.0072.092394
HSA-MIR-4262100.0073.263931
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-190A-3P100.0080.355520
HSA-MIR-3163100.0077.238605
HSA-MIR-6873-3P100.0071.422626
HSA-MIR-6833-3P100.0070.633197
HSA-MIR-4768-5P100.0069.492861
HSA-MIR-200B-3P100.0073.312693
HSA-MIR-200C-3P100.0073.352685
HSA-MIR-429100.0073.442698
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-3667-3P99.9967.171636
HSA-MIR-181A-5P99.9972.962995
HSA-MIR-181B-5P99.9972.972996
HSA-MIR-181C-5P99.9972.952996
HSA-MIR-181D-5P99.9973.042997
HSA-MIR-366299.9973.825684
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-33A-5P99.9968.621055
HSA-MIR-33B-5P99.9968.581062
HSA-MIR-1213699.9872.815713
HSA-MIR-477599.9875.006394
HSA-MIR-499A-5P99.9870.791323
HSA-MIR-3617-3P99.9867.86918
HSA-MIR-548N99.9871.944170
HSA-MIR-3065-5P99.9771.563281
HSA-MIR-314899.9775.066478

Literature-anchored findings (GeneRIF, showing 40)

  • Hepatocyte growth factor induces collagenase (matrix metalloproteinase-1) via the transcription factor Ets-1 in human hepatic stellate cell line. (PMID:11830328)
  • c-Ets1 expression in epithelial ovarian cancer correlates to the malignant potential of the tumor. (PMID:11836635)
  • Sp100 interacts with ETS-1 and stimulates its transcriptional activity. (PMID:11909962)
  • Epidermal growth factor-mediated activation of the ETS domain transcription factor Elk-1 requires nuclear calcium (PMID:11971908)
  • cooperatively binds to the palindromic head to head ETS-binding sites of the stromelysin-1 promoter by counteracting autoinhibition (PMID:12034715)
  • Coexpression of P-glycoprotein, Ets-1, and p53 in oral carcinoma is associated with poor prognosis (PMID:12073053)
  • results showed a significant correlation between microvessel counts and ets-1 gene expression levels in uterine cervical cancers;localization of ETS-1 was similar to that of vascular endothelial cells (PMID:12377648)
  • results showed a significant correlation between microvessel count and ets-1 gene expression levels in uterine endometrial cancers; localization of ETS-1 was similar to that of vascular endothelial cells (PMID:12377649)
  • HIF-2alpha and Ets-1 binding is required for transcriptional activation of Flk-1 in endothelial cells (PMID:12464608)
  • Its expression is an independent prognostic marker for relapse-free survival in breast cancer (PMID:12466970)
  • ETS1 phosphorylation by CAMKII is regulated in a pathway with calcium and GM-CSF (PMID:12475968)
  • ETS1 may be regulated by PKCalpha in invasive breast cancer cells (PMID:12632071)
  • a splicing variant of Ets1 is downregulated in invasive Ets1-expressing breast cancer cells (PMID:12632078)
  • interacts with EAPII and modulates its transcriptional function (PMID:12743594)
  • AP-2alpha gene expression in the placenta is enhanced by a cis-acting element at nucleotides -1279 to -1139 that contains a critical Ets1-binding site. (PMID:12843180)
  • findings suggest a potential mechanism by which PTHrP transcription may be regulated by Ets-1 as a consequence of events that promote tumorigenic behavior in breast epithelial cells (PMID:12850290)
  • Ets-1 expression may be an important pathogenic mechanism and predictor of aggressive biologic behavior of cutaneous melanoma (PMID:12920221)
  • ets-1 together with microvessel density determined by CD105 may have prognostic value in the multistep event of carcinogenesis. (PMID:12932931)
  • Upregulation of Ets 1 transcription factor ia assiciated with neoplasm invasiveness in Hereditary nonpolyposis colorectal cancers (PMID:12949792)
  • overexpression of ETS-1 is associated with angiogenesis and ovarian cancer progression (PMID:12967474)
  • binding of ETS transcription factors to the ETS binding sites in the human LIF promoter is critical for its inducibility in response to T cell activators and play an important functional role within the endocrine-immune network. (PMID:14557674)
  • p53 inhibits transcriptional activation of invasion gene thromboxane synthase mediated by the proto-oncogenic factor ets-1. (PMID:14586398)
  • Ets-1 is involved in transcriptional regulation of factors involved in invasion of melanoma cells. (PMID:14704859)
  • Ets-1 expression is increased in asthma and contributes to enhanced expression of TNF-alpha-induced matrix metalloproteinase-9 and tenascin in bronchial fibroblasts activated ex vivo. (PMID:14734780)
  • a novel, functional binding element in the proximal region of the TN-C promoter mediating responsiveness to TGF-beta involving Smad3/4, Sp1, Ets1, and CBP/p300 (PMID:15001984)
  • Data suggest that glycogen synthase kinase-3beta-phosphorylated Ets1 is a target of Runx1-recruited calcineurin phosphatase at the granulocyte macrophage colony-stimulating factor promoter. (PMID:15123671)
  • Ets-1 regulated angiogenesis through the induction of angiogenic growth factors (VEGF and HGF). (PMID:15173033)
  • SP100 modulates ETS1-dependent biological processes (PMID:15247905)
  • ETS-1 in ovarian endometriomas is significantly positively correlated with microvessel counts. (PMID:15302318)
  • Protein kinase C is a potential regulator of Ets1 activity in breast cancer cells. (PMID:15389378)
  • proximal 5’-flanking region of the IKKalpha gene contains a functional promoter reciprocally regulated by p53 and ETS-1 (PMID:15469934)
  • Ets1 serves as an effector for protein kinase C alpha to fulfil certain functions in cancer ce (PMID:15531915)
  • Interleukins 2 and 15 regulate Ets1 expression via ERK1/2 and MNK1 in human natural killer cells (PMID:15563472)
  • Ras/mitogen-activated protein kinase signaling activates ETS-1 by CBPp300 recruitment. (PMID:15572696)
  • Ets-1 has a role in breast tumor growth and spread [review] (PMID:15574387)
  • Associated with tumour growth and histological differentiation of breast carcinomas. (PMID:15578430)
  • Genes that are negatively regulated by ETS1 and upregulated by SP100 have antimigratory or antiangiogenic properties. (PMID:15592518)
  • Results suggest that Ets-1 might play an important role in carcinogenesis and/or the progression of human prostatic carcinomas. (PMID:15693893)
  • Ets1 is activated in human adrenocortical cells expressing a mutated K-ras gene. (PMID:15699632)
  • Modification of local protooncogene Ets-1 level is likely being involved in the regulation of melanoma growth (PMID:15848191)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_rerioets1ENSDARG00000024431
mus_musculusEts1ENSMUSG00000032035
rattus_norvegicusEts1ENSRNOG00000008941

Paralogs (28): ETV1 (ENSG00000006468), ETV7 (ENSG00000010030), SPI1 (ENSG00000066336), ELF4 (ENSG00000102034), ETV2 (ENSG00000105672), ERF (ENSG00000105722), ELF2 (ENSG00000109381), ELK3 (ENSG00000111145), ETV3 (ENSG00000117036), ELF1 (ENSG00000120690), SPDEF (ENSG00000124664), ELK1 (ENSG00000126767), EHF (ENSG00000135373), ELF5 (ENSG00000135374), ETV6 (ENSG00000139083), FLI1 (ENSG00000151702), GABPA (ENSG00000154727), ERG (ENSG00000157554), ETS2 (ENSG00000157557), ELK4 (ENSG00000158711), ELF3 (ENSG00000163435), FEV (ENSG00000163497), SPIC (ENSG00000166211), ETV4 (ENSG00000175832), ETV5 (ENSG00000244405), ETV3L (ENSG00000253831), ERFL (ENSG00000268041), SPIB (ENSG00000269404)

Protein

Protein identifiers

Protein C-ets-1P14921 (reviewed: P14921)

Alternative names: p54

All UniProt accessions (2): P14921, V9GYD6

UniProt curated annotations — full annotation on UniProt →

Function. Transcription factor. Directly controls the expression of cytokine and chemokine genes in a wide variety of different cellular contexts. May control the differentiation, survival and proliferation of lymphoid cells. May also regulate angiogenesis through regulation of expression of genes controlling endothelial cell migration and invasion. Acts as a dominant-negative for isoform c-ETS-1A.

Subunit / interactions. Binds DNA as a homodimer; homodimerization is required for transcription activation. Interacts with MAF and MAFB. Interacts with PAX5; the interaction alters DNA-binding properties. Interacts with DAXX. Interacts with UBE2I. Interacts with SP100; the interaction is direct and modulates ETS1 transcriptional activity.

Subcellular location. Nucleus. Cytoplasm.

Tissue specificity. Highly expressed within lymphoid cells. Isoforms c-ETS-1A and Ets-1 p27 are both detected in all fetal tissues tested, but vary with tissue type in adult tissues. None is detected in brain or kidney.

Post-translational modifications. Sumoylated on Lys-15 and Lys-227, preferentially with SUMO2; which inhibits transcriptional activity. Ubiquitinated; which induces proteasomal degradation. Phosphorylation at Ser-251, Ser-282 and Ser-285 by CaMK2/CaMKII in response to calcium signaling decreases affinity for DNA: an increasing number of phosphoserines causes DNA-binding to become progressively weaker.

Activity regulation. Autoinhibited by a module composed of four alpha helices (HI-1, HI-2, H4, and H5) that flank the DNA-binding ETS domain, reducing the affinity for DNA. Phosphorylation by CaMK2/CaMKII in response to calcium signaling decreases affinity for DNA.

Induction. Up-regulated by retinoic acid, VEGF, TNF/TNFA, lipopolysaccharide and in response to hypoxia (at protein level).

Similarity. Belongs to the ETS family.

Isoforms (5)

UniProt IDNamesCanonical?
P14921-1c-ETS-1A, Ets-1 p51yes
P14921-2c-ETS-1B, Ets-1 p42
P14921-33
P14921-4Ets-1 p27, Ets-1Delta(III-VI)
P14921-55

RefSeq proteins (4): NP_001137292, NP_001155894, NP_001317380, NP_005229 (=MANE)

Domains & families (InterPro)

IDNameType
IPR000418Ets_domDomain
IPR003118Pointed_domDomain
IPR013761SAM/pointed_sfHomologous_superfamily
IPR016311Transform_prot_C-etsFamily
IPR036388WH-like_DNA-bd_sfHomologous_superfamily
IPR036390WH_DNA-bd_sfHomologous_superfamily
IPR041886SAM_PNT-ETS-1Domain
IPR045688Ets1_N_flankDomain
IPR046328ETS_famFamily

Pfam: PF00178, PF02198, PF19525

UniProt features (49 total): modified residue 12, helix 8, strand 6, splice variant 5, region of interest 5, cross-link 4, sequence conflict 4, turn 2, chain 1, domain 1, DNA-binding region 1

Structure

Experimental structures (PDB)

21 structures.

PDBMethodResolution (Å)
1GVJX-RAY DIFFRACTION1.53
4LG0X-RAY DIFFRACTION2.19
4L18X-RAY DIFFRACTION2.3
3WTSX-RAY DIFFRACTION2.35
3WTTX-RAY DIFFRACTION2.35
3WU1X-RAY DIFFRACTION2.4
4L0YX-RAY DIFFRACTION2.5
2NNYX-RAY DIFFRACTION2.58
3WU0X-RAY DIFFRACTION2.6
3WTZX-RAY DIFFRACTION2.61
3WTUX-RAY DIFFRACTION2.7
3WTVX-RAY DIFFRACTION2.7
3WTYX-RAY DIFFRACTION2.7
4L0ZX-RAY DIFFRACTION2.7
3WTXX-RAY DIFFRACTION2.8
3WTWX-RAY DIFFRACTION2.9
5ZMCX-RAY DIFFRACTION2.99
3MFKX-RAY DIFFRACTION3
3RI4X-RAY DIFFRACTION3
2STTSOLUTION NMR
2STWSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P14921-F165.950.32

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (16): 38, 223, 251, 254, 265, 267, 270, 282, 285, 305, 8, 15, 138, 227, 8, 15

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-2559585Oncogene Induced Senescence
R-HSA-9976102Differentiation of naive CD4+ T cells to T helper 2 cells (Th2 cells)

MSigDB gene sets: 625 (showing top): PID_BCR_5PATHWAY, GSE45365_CD8A_DC_VS_CD11B_DC_IFNAR_KO_UP, GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_POSITIVE_REGULATION_OF_ERYTHROCYTE_DIFFERENTIATION, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_INFLAMMATORY_RESPONSE, TTTGTAG_MIR520D, GOBP_ERYTHROCYTE_HOMEOSTASIS, GOBP_POSITIVE_REGULATION_OF_VASCULATURE_DEVELOPMENT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, KEGG_DORSO_VENTRAL_AXIS_FORMATION, TURJANSKI_MAPK7_TARGETS, MCBRYAN_PUBERTAL_TGFB1_TARGETS_UP, MCBRYAN_TERMINAL_END_BUD_DN, CAGCTG_AP4_Q5

GO Biological Process (23): regulation of transcription by RNA polymerase II (GO:0006357), transcription by RNA polymerase II (GO:0006366), immune response (GO:0006955), negative regulation of cell population proliferation (GO:0008285), positive regulation of endothelial cell migration (GO:0010595), positive regulation of gene expression (GO:0010628), cell differentiation (GO:0030154), PML body organization (GO:0030578), regulation of apoptotic process (GO:0042981), positive regulation of blood vessel endothelial cell migration (GO:0043536), positive regulation of erythrocyte differentiation (GO:0045648), regulation of angiogenesis (GO:0045765), positive regulation of angiogenesis (GO:0045766), negative regulation of cell cycle (GO:0045786), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of transcription by RNA polymerase II (GO:0045944), response to antibiotic (GO:0046677), cell motility (GO:0048870), positive regulation of inflammatory response (GO:0050729), positive regulation of miRNA transcription (GO:1902895), positive regulation of leukocyte adhesion to vascular endothelial cell (GO:1904996), immune system process (GO:0002376), regulation of DNA-templated transcription (GO:0006355)

GO Molecular Function (13): transcription cis-regulatory region binding (GO:0000976), RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), transcription corepressor binding (GO:0001222), DNA-binding transcription activator activity, RNA polymerase II-specific (GO:0001228), nucleic acid binding (GO:0003676), DNA binding (GO:0003677), DNA-binding transcription factor activity (GO:0003700), identical protein binding (GO:0042802), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), protein binding (GO:0005515), sequence-specific DNA binding (GO:0043565), sequence-specific double-stranded DNA binding (GO:1990837)

GO Cellular Component (4): chromatin (GO:0000785), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Cellular Senescence1
Differentiation of T cells1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
regulation of DNA-templated transcription3
RNA polymerase II transcription regulatory region sequence-specific DNA binding3
cellular anatomical structure3
transcription by RNA polymerase II2
DNA-templated transcription2
negative regulation of cellular process2
angiogenesis2
regulation of transcription by RNA polymerase II2
positive regulation of DNA-templated transcription2
binding2
immune system process1
response to stimulus1
cell population proliferation1
regulation of cell population proliferation1
regulation of endothelial cell migration1
positive regulation of cell migration1
endothelial cell migration1
gene expression1
regulation of gene expression1
positive regulation of macromolecule biosynthetic process1
cellular developmental process1
nuclear body organization1
apoptotic process1
regulation of programmed cell death1
positive regulation of endothelial cell migration1
blood vessel endothelial cell migration1
regulation of blood vessel endothelial cell migration1
erythrocyte differentiation1
positive regulation of myeloid cell differentiation1
regulation of erythrocyte differentiation1
regulation of anatomical structure morphogenesis1
regulation of vasculature development1
regulation of angiogenesis1
positive regulation of vasculature development1
cell cycle1
regulation of cell cycle1
positive regulation of RNA biosynthetic process1
response to chemical1
cellular process1
inflammatory response1

Protein interactions and networks

STRING

3484 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ETS1RUNX1Q01196992
ETS1PAX5Q02548958
ETS1TP53P04637925
ETS1EP300Q09472914
ETS1GATA3P23771902
ETS1MAFBQ9Y5Q3870
ETS1TBX21Q9UL17862
ETS1STAT5BP51692836
ETS1GATA1P15976831
ETS1MAPK1P28482820
ETS1CREB1P16220815
ETS1FOXO1Q12778812
ETS1CEBPAP49715802
ETS1JUNP05412762
ETS1FOSP01100733

IntAct

108 interactions, top by confidence:

ABTypeScore
SRSF11ETS1psi-mi:“MI:0915”(physical association)0.570
ETS1NFKB1psi-mi:“MI:0915”(physical association)0.540
ETS1NFKB1psi-mi:“MI:2364”(proximity)0.540
MAPK1ETS1psi-mi:“MI:2364”(proximity)0.530
ETS1MAPK1psi-mi:“MI:0914”(association)0.530
ETS1MAPK1psi-mi:“MI:2364”(proximity)0.530
ETS1ARID4Bpsi-mi:“MI:0915”(physical association)0.520
EIF5BETS1psi-mi:“MI:0915”(physical association)0.520
JUNETS1psi-mi:“MI:0915”(physical association)0.520
ETS1CYBC1psi-mi:“MI:0915”(physical association)0.520
CYBC1ETS1psi-mi:“MI:0915”(physical association)0.520
PRKDCETS1psi-mi:“MI:0407”(direct interaction)0.520
ETS1SP100psi-mi:“MI:0915”(physical association)0.510
SP100ETS1psi-mi:“MI:0915”(physical association)0.510
ETS1ETS1psi-mi:“MI:0915”(physical association)0.500
ETS1ETS1psi-mi:“MI:0914”(association)0.500
TAL1ETS1psi-mi:“MI:0914”(association)0.500
ETS1TAL1psi-mi:“MI:0915”(physical association)0.500
TLX1ETS1psi-mi:“MI:0915”(physical association)0.460
TLX3ETS1psi-mi:“MI:0915”(physical association)0.460
ETS1TLX1psi-mi:“MI:0403”(colocalization)0.460
ETS1TLX3psi-mi:“MI:0403”(colocalization)0.460
TLX3ETS1psi-mi:“MI:0403”(colocalization)0.460
ETS1ARpsi-mi:“MI:2364”(proximity)0.450
ETS1ARpsi-mi:“MI:0403”(colocalization)0.450
ARETS1psi-mi:“MI:0403”(colocalization)0.450

BioGRID (137): ETS1 (Affinity Capture-Western), ETS1 (Affinity Capture-Western), DAXX (Two-hybrid), ETS1 (Affinity Capture-Western), ETS1 (Affinity Capture-MS), ETS1 (Affinity Capture-Western), ZBTB7A (Affinity Capture-Western), TP53 (Affinity Capture-Western), MAPK1 (Co-localization), AR (Co-localization), NFKB1 (Co-localization), SMAD3 (Co-localization), PKM (Affinity Capture-MS), CHI3L2 (Affinity Capture-MS), THUMPD1 (Affinity Capture-MS)

ESM2 similar proteins: A1A4L6, F1QDF8, O35914, O75113, O95238, P01105, P10157, P13474, P14921, P15036, P15037, P15062, P15375, P18755, P18756, P19102, P19335, P27577, P40649, P41156, P78545, Q28EW4, Q28F43, Q32NH9, Q3MHT3, Q3UM89, Q3UPW2, Q3YFL6, Q4G112, Q4V7E1, Q5M7N6, Q5SW75, Q66IG8, Q6IE24, Q6NRK3, Q6PUR7, Q708W1, Q708W2, Q76I76, Q7M6U3

Diamond homologs: A0A1W2PQ73, A0JN51, A1A4L6, A1YF15, A1YG61, A1YG91, A2D4Z7, A2T737, A2T762, A3FEM2, A4GTP4, A8WFJ9, O00321, O01519, O70132, O70273, O95238, P01105, P10157, P11308, P11536, P13474, P14921, P15036, P15037, P15062, P18755, P18756, P19102, P19419, P20105, P26323, P27577, P28322, P28324, P29773, P29774, P29775, P29776, P32519

SIGNOR signaling

35 interactions.

AEffectBMechanism
MAPK3up-regulatesETS1phosphorylation
ETS1“up-regulates quantity by expression”ITGA11
ETS1“up-regulates quantity by expression”VWF“transcriptional regulation”
ETS1“up-regulates quantity by expression”ABCB1“transcriptional regulation”
ETS1“up-regulates quantity by expression”CD8A“transcriptional regulation”
ETS1“up-regulates quantity by expression”ECE1“transcriptional regulation”
ETS1“up-regulates quantity by expression”GP6“transcriptional regulation”
ETS1“up-regulates quantity by expression”MMP9“transcriptional regulation”
ETS1“up-regulates quantity by expression”MMP13“transcriptional regulation”
ETS1“up-regulates quantity by expression”SLC26A3“transcriptional regulation”
TP53“down-regulates activity”ETS1binding
ETS1“up-regulates quantity by expression”TBXAS1“transcriptional regulation”
ETS1“up-regulates quantity by expression”MUC4“transcriptional regulation”
GFI1“down-regulates activity”ETS1binding
ETS1“down-regulates activity”GFI1binding
ETS1“down-regulates quantity by repression”BAX“transcriptional regulation”
ETS1“up-regulates quantity”FOS“transcriptional regulation”
TLX1“down-regulates activity”ETS1binding
TLX3“down-regulates activity”ETS1binding
ETS1up-regulatesApoptosis
ETS1“up-regulates quantity by expression”TNC“transcriptional regulation”
ETS1“up-regulates quantity by expression”TBX22“transcriptional regulation”
GSK3B“up-regulates quantity by stabilization”ETS1phosphorylation
MAFdown-regulatesETS1binding
MAPK7up-regulatesETS1phosphorylation
CAMK2Adown-regulatesETS1phosphorylation

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 73 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

GO biological processes:

GO termPartnersFoldFDR
transcription by RNA polymerase II77.7×5e-03
negative regulation of cell population proliferation95.9×5e-03

Disease & clinical

Cancer significance

Clinical variants and AI predictions

ClinVar

48 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic1
Likely pathogenic1
Uncertain significance29
Likely benign3
Benign5

Top pathogenic / likely-pathogenic (2)

Variant IDHGVSClassification
627517NM_001143820.2(ETS1):c.1044_1049delinsTT (p.Lys349fs)Pathogenic
1333667NM_001143820.2(ETS1):c.103C>T (p.Arg35Ter)Likely pathogenic

SpliceAI

1303 predictions. Top by Δscore:

VariantEffectΔscore
11:128462576:CCTGA:Cacceptor_loss1.0000
11:128462577:CTG:Cacceptor_loss1.0000
11:128463503:CCTTA:Cdonor_loss1.0000
11:128463504:CTTA:Cdonor_loss1.0000
11:128463505:TTAC:Tdonor_loss1.0000
11:128463506:TA:Tdonor_loss1.0000
11:128463507:A:Cdonor_loss1.0000
11:128463624:CTGC:Cacceptor_gain1.0000
11:128463625:TGC:Tacceptor_gain1.0000
11:128463626:GCCTA:Gacceptor_loss1.0000
11:128463627:CCTAG:Cacceptor_loss1.0000
11:128463628:C:CCacceptor_gain1.0000
11:128463628:CTAG:Cacceptor_loss1.0000
11:128463629:T:Cacceptor_loss1.0000
11:128463711:C:Adonor_gain1.0000
11:128484818:CCT:Cdonor_loss1.0000
11:128484819:CTAC:Cdonor_loss1.0000
11:128484821:A:ACdonor_gain1.0000
11:128484822:C:CCdonor_gain1.0000
11:128484822:CCA:Cdonor_gain1.0000
11:128484867:T:TAdonor_gain1.0000
11:128485067:ATAGC:Aacceptor_gain1.0000
11:128485068:TAGC:Tacceptor_gain1.0000
11:128485069:AGC:Aacceptor_gain1.0000
11:128485070:GC:Gacceptor_gain1.0000
11:128485071:CC:Cacceptor_gain1.0000
11:128485072:C:CCacceptor_gain1.0000
11:128485073:T:Aacceptor_loss1.0000
11:128485079:C:CTacceptor_gain1.0000
11:128485080:A:Tacceptor_gain1.0000

AlphaMissense

3225 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
11:128462399:G:CH430D1.000
11:128462401:A:GL429P1.000
11:128462419:C:TG423E1.000
11:128462420:C:AG423W1.000
11:128462422:A:GL422P1.000
11:128462425:A:GL421P1.000
11:128462434:A:GL418P1.000
11:128462434:A:TL418Q1.000
11:128462439:A:CC416W1.000
11:128462440:C:TC416Y1.000
11:128462441:A:GC416R1.000
11:128462445:A:CF414L1.000
11:128462445:A:TF414L1.000
11:128462446:A:CF414C1.000
11:128462446:A:GF414S1.000
11:128462447:A:CF414V1.000
11:128462447:A:GF414L1.000
11:128462447:A:TF414I1.000
11:128462449:C:GR413P1.000
11:128462450:G:TR413S1.000
11:128462452:T:CY412C1.000
11:128462453:A:CY412D1.000
11:128462453:A:GY412H1.000
11:128462453:A:TY412N1.000
11:128462455:A:TV411E1.000
11:128462456:C:TV411M1.000
11:128462458:T:CY410C1.000
11:128462458:T:GY410S1.000
11:128462459:A:CY410D1.000
11:128462459:A:GY410H1.000

dbSNP variants (sampled 300 via entrez): RS1000116887 (11:128536929 A>G), RS1000128482 (11:128578239 T>C), RS1000144563 (11:128533956 A>G), RS1000158303 (11:128574808 T>G), RS1000175669 (11:128473531 C>G,T), RS1000212773 (11:128560412 C>A,G,T), RS1000213054 (11:128569929 T>C,G), RS1000218068 (11:128520625 C>T), RS1000322906 (11:128509462 A>G), RS1000323372 (11:128554302 T>A), RS1000325576 (11:128522424 C>A,G,T), RS1000346614 (11:128529624 G>A), RS1000357516 (11:128463024 T>A), RS1000369810 (11:128469172 C>G), RS1000393621 (11:128566386 C>T)

Disease associations

OMIM: gene MIM:164720 | disease phenotypes: MIM:147791

GenCC curated gene-disease

DiseaseClassificationInheritance
congenital heart diseaseModerateAutosomal dominant
systemic lupus erythematosusSupportiveUnknown
neurodevelopmental disorderLimitedAutosomal dominant
Tourette syndromeNo Known Disease RelationshipUnknown

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
congenital heart diseaseModerateAD

Mondo (5): Jacobsen syndrome (MONDO:0007838), congenital heart disease (MONDO:0005453), Tourette syndrome (MONDO:0007661), systemic lupus erythematosus (MONDO:0007915), neurodevelopmental disorder (MONDO:0700092)

Orphanet (1): Jacobsen syndrome (Orphanet:2308)

HPO phenotypes

44 total (30 of 44 shown, HPO-id order):

HPOTerm
HP:0000093Proteinuria
HP:0000155Oral ulcer
HP:0000488Retinopathy
HP:0000716Depression
HP:0000790Hematuria
HP:0000822Hypertension
HP:0000992Cutaneous photosensitivity
HP:0001250Seizure
HP:0001369Arthritis
HP:0001596Alopecia
HP:0001824Weight loss
HP:0001873Thrombocytopenia
HP:0001878Hemolytic anemia
HP:0001882Decreased total leukocyte count
HP:0001945Fever
HP:0002039Anorexia
HP:0002072Chorea
HP:0002716Lymphadenopathy
HP:0003453Antineutrophil antibody positivity
HP:0003493Antinuclear antibody positivity
HP:0005421Decreased circulating complement C3 concentration
HP:0005764Polyarticular arthritis
HP:0007417Discoid lupus rash
HP:0012085Pyuria
HP:0012378Fatigue
HP:0020151Anti-dsDNA antibody positivity
HP:0025300Malar rash
HP:0030880Raynaud phenomenon
HP:0032235Anti-La/SS-B antibody positivity
HP:0033028Anti-U1 ribonucleoprotein antibody positivity

GWAS associations

107 associations (top):

StudyTraitp-value
GCST000507_5Systemic lupus erythematosus2.000000e-25
GCST000592_1Systemic lupus erythematosus2.000000e-11
GCST000612_26Celiac disease5.000000e-16
GCST001454_10Rheumatoid arthritis8.000000e-07
GCST001762_171Obesity-related traits8.000000e-06
GCST001795_26Systemic lupus erythematosus3.000000e-08
GCST002083_4Self-reported allergy6.000000e-07
GCST002318_104Rheumatoid arthritis1.000000e-10
GCST002318_105Rheumatoid arthritis1.000000e-06
GCST002318_106Rheumatoid arthritis4.000000e-06
GCST002643_3Follicular lymphoma7.000000e-11
GCST002874_57Psoriasis2.000000e-09
GCST002874_58Psoriasis3.000000e-06
GCST002874_59Psoriasis3.000000e-06
GCST002874_63Psoriasis7.000000e-06
GCST002874_65Psoriasis1.000000e-08
GCST002932_26Manganese levels2.000000e-06
GCST003090_7Depressive and manic episodes in bipolar disorder7.000000e-06
GCST003091_6Depressive episodes in bipolar disorder3.000000e-06
GCST003155_14Systemic lupus erythematosus1.000000e-10
GCST003156_32Systemic lupus erythematosus2.000000e-08
GCST003184_16Atopic dermatitis1.000000e-20
GCST003184_8Atopic dermatitis2.000000e-18
GCST003268_28Psoriasis vulgaris1.000000e-07
GCST003599_18Systemic lupus erythematosus7.000000e-12
GCST003622_38Systemic lupus erythematosus1.000000e-06
GCST004131_65Inflammatory bowel disease2.000000e-08
GCST004133_43Ulcerative colitis6.000000e-06
GCST004603_71Platelet count6.000000e-18
GCST004607_37Plateletcrit6.000000e-17

EFO canonical traits (24, from GWAS)

EFO IDTrait name
EFO:0007704depressive episode measurement
EFO:0007705manic episode measurement
EFO:1001494psoriasis vulgaris
EFO:0004309platelet count
EFO:0007985platelet crit
EFO:0004833neutrophil count
EFO:0004842eosinophil count
EFO:0007987granulocyte count
EFO:0005090basophil count
EFO:0005091monocyte count
EFO:0004587lymphocyte count
EFO:0007993lymphocyte percentage of leukocytes
EFO:0008377mosquito bite reaction itch intensity measurement
EFO:0008378mosquito bite reaction size measurement
EFO:0004695intraocular pressure measurement
EFO:0005128albumin:globulin ratio measurement
EFO:0004312vital capacity
EFO:0009933Thyroid preparation use measurement
EFO:0009658adverse effect
EFO:0004847age at onset
EFO:0004530triglyceride measurement
EFO:0004531urate measurement
EFO:0007991eosinophil percentage of leukocytes
EFO:0007990neutrophil percentage of leukocytes

MeSH disease descriptors (4)

DescriptorNameTree numbers
D006330Heart Defects, CongenitalC14.240.400; C14.280.400; C16.131.240.400
D008180Lupus Erythematosus, SystemicC17.300.480; C20.111.590
D065886Neurodevelopmental DisordersF03.625
D005879Tourette SyndromeC10.228.140.079.898; C10.228.662.825.800; C10.574.500.850; C16.320.400.820; F03.625.992.850

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

109 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression, affects expression, decreases methylation9
Particulate Matteraffects cotreatment, increases expression, decreases expression, decreases reaction, increases abundance (+1 more)4
trichostatin Aaffects cotreatment, increases expression3
Benzo(a)pyreneaffects methylation, increases expression, increases methylation3
Copperaffects binding, affects expression, increases expression3
Cyclosporinedecreases expression, increases expression3
methylmercuric chlorideincreases expression2
bisphenol Adecreases expression, decreases methylation2
mercuric bromideincreases expression, affects cotreatment2
belinostatincreases expression, affects cotreatment2
Vorinostataffects cotreatment, increases expression2
Panobinostataffects cotreatment, increases expression2
Estradiolaffects cotreatment, increases expression, decreases expression2
Fluorouracilincreases expression, affects reaction, decreases expression2
Hydrogen Peroxidedecreases expression, decreases reaction, increases reaction, affects expression2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Silicon Dioxideincreases expression2
Tobacco Smoke Pollutiondecreases methylation, increases expression2
Aflatoxin B1decreases methylation, increases expression2
Cadmium Chlorideincreases abundance, increases expression, decreases expression2
aristolochic acid Idecreases expression1
TAK-243increases sumoylation1
geldanamycinincreases expression1
apocarotenaldecreases expression1
triphenyl phosphateaffects expression1
sodium arsenateincreases abundance, increases expression1
beta-lapachoneincreases expression1
arseniteaffects binding, increases reaction, increases expression, decreases reaction, decreases expression1
sodium arseniteincreases expression1
benzo(k)fluoranthenedecreases reaction, increases expression1

Cellosaurus cell lines

10 cell lines: 7 cancer cell line, 3 embryonic stem cell

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A1M2SEES3-1V human ETS1, clone1Embryonic stem cellMale
CVCL_A1M3SEES3-1V human ETS1, clone2Embryonic stem cellMale
CVCL_A1M4SEES3-1V human ETS1, clone3Embryonic stem cellMale
CVCL_B8FMAbcam HCT 116 ETS1 KOCancer cell lineMale
CVCL_B8VHAbcam MCF-7 ETS1 KOCancer cell lineFemale
CVCL_B9HVAbcam A-549 ETS1 KOCancer cell lineMale
CVCL_E1WLHAP1 ETS1 (-) 1Cancer cell lineMale
CVCL_E1WMHAP1 ETS1 (-) 2Cancer cell lineMale
CVCL_E1WNHAP1 ETS1 (-) 3Cancer cell lineMale
CVCL_E1WPHAP1 ETS1 (-) 4Cancer cell lineMale

Clinical trials (associated diseases)

301 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00668824PHASE4UNKNOWNImproved Diagnosis of Congenital Heart Disease by Magnetic Resonance Imaging Using Vasovist
NCT01368705PHASE4COMPLETEDNitrogen Balance in Infants After Post Cardiothoracic Surgery
NCT01619982PHASE4COMPLETEDPre-operative Prophylaxis With Vancomycin and Cefazolin in Pediatric Cardiovascular Surgery Patients
NCT02122679PHASE4WITHDRAWNTranexamic Acid Effect on Platelet Aggregation Following Infant Cardiopulmonary Bypass
NCT02527811PHASE4UNKNOWNUlinastatin Injection in in Pediatric Patients Undergoing Open Heart Surgery
NCT03014700PHASE4COMPLETEDFibrinogen Concentrate vs Cryoprecipitate
NCT03408340PHASE4TERMINATEDParavertebral Nerve Blocks in Neonates
NCT03630796PHASE4UNKNOWNEffect of Sevoflurane in Postoperative Troponin I Levels in Children Undergoing Congenital Heart Defects Surgery
NCT03667703PHASE4COMPLETEDStress Ulcer Prophylaxis Versus Placebo in Critically Ill Infants With Congenital Heart Disease
NCT04453761PHASE4UNKNOWNThiamine Influenced on Substrate Energy Effectiveness in Indonesian Children Undergoing Cardiopulmonary Bypass
NCT06668389PHASE4RECRUITINGSodium-Glucose Cotransporter 2 Inhibitors for Repaired Tetralogy of Fallot Patients for Enhancement of Cardio-Pulmonary Status Trial
NCT07499154PHASE4NOT_YET_RECRUITINGPerioperative Lidocaine for Lung Protection in Infants Undergoing Cardiac Surgery
NCT00000470PHASE3COMPLETEDInfant Heart Surgery: Central Nervous System Sequelae of Circulatory Arrest
NCT00000494PHASE3COMPLETEDManagement of Patent Ductus in Premature Infants
NCT01134302PHASE3UNKNOWNHybrid Versus Norwood Management Strategies in Infants Undergoing Single Ventricle Palliation
NCT01607983PHASE3WITHDRAWNEffects of Pulmonary Vasodilation Upon VA Coupling in Fontan Patients
NCT01662011PHASE3UNKNOWNApplication of Neurally Adjusted Ventilatory Assist to Children After Congenital Cardiac Surgery
NCT02320669PHASE3COMPLETEDPhase 3 Triiodothyronine Supplementation for Infants After Cardiopulmonary Bypass
NCT02615262PHASE3COMPLETEDIntraoperative Dexamethasone in Pediatric Cardiac Surgery
NCT03153137PHASE3COMPLETEDClinical Study Assessing the Efficacy and Safety of Macitentan in Fontan-palliated Subjects
NCT03154476PHASE3COMPLETEDRole of Sildenafil for Fontan Associated Liver Disease (SiFALD) Study
NCT04536194PHASE3COMPLETEDDopamine Versus Norepinephrine Under General Anesthesia
NCT04702373PHASE3ACTIVE_NOT_RECRUITINGTraining in Exercise Activities and Motion for Growth (TEAM 4 Growth) RCT
NCT05049590PHASE3COMPLETEDAcute Normovolemic Hemodilution in Complex Cardiac Surgery
NCT06406517PHASE3UNKNOWNComparative Effectiveness of Gadopiclenol for Evaluation of Adult Congenital Heart Anatomy and Hemodynamics
NCT06693674PHASE3RECRUITINGEffect of Sacubitril-Valsartan on Cardiac Structure and Function
NCT06955260PHASE3NOT_YET_RECRUITINGSGLT2 Inhibition With Empagliflozin in Fontan Circulatory Failure
NCT00115375PHASE2COMPLETEDPlatelet Aggregation Inhibition in Children on Clopidogrel (PICOLO)
NCT00350220PHASE2COMPLETEDTransfusion Strategies in Pediatric Cardiothoracic Surgery
NCT00374088PHASE2COMPLETEDN-Acetylcysteine in Neonatal Congenital Heart Surgery (INACT Study)
NCT00538785PHASE2COMPLETEDA Study to Evaluate MEDI-524 In Children With Hemodynamically Significant Congenital Heart Disease
NCT00770705PHASE2WITHDRAWNParenteral Phenoxybenzamine During Congenital Heart Disease Surgery
NCT00919945PHASE2TERMINATEDImpact of Early Enteral Feeding on Splanchnic Blood Flow After Surgery for Critical Heart Disease in the Newborn
NCT01063712PHASE2COMPLETEDSafety and Effectiveness of the Device Nit-Occlud® PDA-R
NCT01069510PHASE2COMPLETEDSpironolactone in Adult Congenital Heart Disease
NCT01189981PHASE2COMPLETEDEffect of eHealth Encouragements to Intensive Exercise in Adolescents With Congenital Heart Disease
NCT01330433PHASE2COMPLETEDEffects of CoSeal on Bleeding & Adhesions in Pediatric Heart Surgery
NCT01662037PHASE2COMPLETEDBosentan Therapy in Children With Functional Single Ventricle
NCT01668264PHASE2UNKNOWNImaging Assessment of Diastolic Function
NCT01827059PHASE2UNKNOWNBosentan In Exercise Induced Pulmonary Arterial Hypertension in CongenitaL Heart diseasE