FAM13B-AS1

Summary

FAM13B-AS1 (FAM13B antisense RNA 1, HGNC:55597) is a long non-coding RNA gene on chromosome 5q31.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55597
Approved symbol	FAM13B-AS1
Name	FAM13B antisense RNA 1
Location	5q31.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000246323
Ensembl biotype	lncRNA
Entrez	100130172
RNAcentral	URS0000A767C3 — lncRNA, 2920 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000500267, ENST00000741899

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500267 — 2 exons

Exon	Start	End
ENSE00001969436	138036193	138037266
ENSE00001983606	138032774	138032952

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 97.23.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.23	gold quality
sural nerve	UBERON:0015488	68.24	gold quality
cortical plate	UBERON:0005343	62.71	gold quality
ventricular zone	UBERON:0003053	62.62	gold quality
ganglionic eminence	UBERON:0004023	60.95	gold quality
testis	UBERON:0000473	57.10	gold quality
right testis	UBERON:0004534	57.05	gold quality
left testis	UBERON:0004533	56.68	gold quality
prefrontal cortex	UBERON:0000451	54.28	gold quality
primary visual cortex	UBERON:0002436	53.57	gold quality
skeletal muscle tissue	UBERON:0001134	53.20	silver quality
monocyte	CL:0000576	52.43	silver quality
bone marrow	UBERON:0002371	52.16	silver quality
cortex of kidney	UBERON:0001225	51.31	silver quality
heart left ventricle	UBERON:0002084	51.16	gold quality
lymph node	UBERON:0000029	51.06	gold quality
right atrium auricular region	UBERON:0006631	50.90	gold quality
calcaneal tendon	UBERON:0003701	50.70	silver quality
blood	UBERON:0000178	50.56	silver quality
heart	UBERON:0000948	50.30	gold quality
nucleus accumbens	UBERON:0001882	49.85	gold quality
superior frontal gyrus	UBERON:0002661	49.71	gold quality
tonsil	UBERON:0002372	49.70	gold quality
frontal cortex	UBERON:0001870	49.12	gold quality
liver	UBERON:0002107	48.95	silver quality
apex of heart	UBERON:0002098	48.80	gold quality
granulocyte	CL:0000094	47.89	silver quality
islet of Langerhans	UBERON:0000006	47.77	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.74	gold quality
corpus callosum	UBERON:0002336	47.72	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.