FAM169A-AS1

Summary

FAM169A-AS1 (FAM169A antisense RNA 1, HGNC:56226) is a long non-coding RNA gene on chromosome 5q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56226
Approved symbol	FAM169A-AS1
Name	FAM169A antisense RNA 1
Location	5q13.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	TP53LC02
Ensembl gene	ENSG00000271714
Ensembl biotype	lncRNA
Entrez	441086
RNAcentral	URS0000A77722 — lncRNA, 1408 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000606270

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606270 — 1 exons

Exon	Start	End
ENSE00003700082	74865893	74867854

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 86.41.

Top tissues by expression

209 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.41	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.77	silver quality
prefrontal cortex	UBERON:0000451	68.47	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	66.50	gold quality
Brodmann (1909) area 9	UBERON:0013540	65.58	gold quality
anterior cingulate cortex	UBERON:0009835	65.27	gold quality
spinal cord	UBERON:0002240	64.12	gold quality
amygdala	UBERON:0001876	63.86	gold quality
nucleus accumbens	UBERON:0001882	63.73	gold quality
putamen	UBERON:0001874	62.28	gold quality
right frontal lobe	UBERON:0002810	62.19	gold quality
caudate nucleus	UBERON:0001873	61.63	gold quality
neocortex	UBERON:0001950	61.62	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	61.60	gold quality
hypothalamus	UBERON:0001898	61.45	gold quality
frontal cortex	UBERON:0001870	61.35	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.75	gold quality
cortical plate	UBERON:0005343	59.39	silver quality
ventricular zone	UBERON:0003053	59.04	silver quality
substantia nigra	UBERON:0002038	59.02	gold quality
ganglionic eminence	UBERON:0004023	58.94	gold quality
cerebral cortex	UBERON:0000956	58.77	gold quality
forebrain	UBERON:0001890	58.68	gold quality
brain	UBERON:0000955	57.71	gold quality
midbrain	UBERON:0001891	56.74	gold quality
corpus epididymis	UBERON:0004359	56.64	gold quality
adenohypophysis	UBERON:0002196	56.20	gold quality
Ammon’s horn	UBERON:0001954	55.19	gold quality
islet of Langerhans	UBERON:0000006	54.99	gold quality
pituitary gland	UBERON:0000007	54.47	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.