FAM174A-DT

Summary

FAM174A-DT (FAM174A divergent transcript, HGNC:55584) is a long non-coding RNA gene on chromosome 5q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55584
Approved symbol	FAM174A-DT
Name	FAM174A divergent transcript
Location	5q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000247877
Ensembl biotype	lncRNA
Entrez	121232371
RNAcentral	URS00022AE77C — lncRNA, 490 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 42 — 42 lncRNA

ENST00000499025, ENST00000504833, ENST00000669567, ENST00000701018, ENST00000720529, ENST00000720530, ENST00000720531, ENST00000720532, ENST00000720533, ENST00000720534, ENST00000720535, ENST00000720536, ENST00000720537, ENST00000720538, ENST00000720539, ENST00000720540, ENST00000720541, ENST00000720542, ENST00000720543, ENST00000720544, ENST00000720545, ENST00000720546, ENST00000720547, ENST00000720548, ENST00000720549, ENST00000720550, ENST00000720551, ENST00000720552, ENST00000720553, ENST00000720554, ENST00000720555, ENST00000720556, ENST00000720557, ENST00000720558, ENST00000720559, ENST00000720560, ENST00000720561, ENST00000720562, ENST00000720563, ENST00000720564, ENST00000720565, ENST00000720566

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000499025 — 5 exons

Exon	Start	End
ENSE00001963439	100449754	100451097
ENSE00001967906	100535161	100535186
ENSE00001979481	100518530	100518611
ENSE00001986351	100526306	100526349
ENSE00001990364	100534080	100534152

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 83.81.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.81	gold quality
bone marrow cell	CL:0002092	72.24	gold quality
colonic epithelium	UBERON:0000397	69.59	silver quality
skeletal muscle tissue	UBERON:0001134	68.41	silver quality
testis	UBERON:0000473	67.23	gold quality
left testis	UBERON:0004533	66.64	gold quality
right testis	UBERON:0004534	65.62	gold quality
sural nerve	UBERON:0015488	64.11	silver quality
bone marrow	UBERON:0002371	63.66	silver quality
duodenum	UBERON:0002114	62.69	gold quality
ventricular zone	UBERON:0003053	61.74	gold quality
kidney	UBERON:0002113	59.61	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.44	gold quality
liver	UBERON:0002107	59.35	gold quality
ganglionic eminence	UBERON:0004023	58.65	gold quality
myometrium	UBERON:0001296	58.50	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.36	gold quality
cortical plate	UBERON:0005343	57.20	silver quality
calcaneal tendon	UBERON:0003701	55.86	gold quality
islet of Langerhans	UBERON:0000006	54.62	gold quality
lung	UBERON:0002048	53.87	gold quality
gall bladder	UBERON:0002110	53.82	gold quality
urinary bladder	UBERON:0001255	53.73	gold quality
pancreas	UBERON:0001264	53.27	gold quality
corpus callosum	UBERON:0002336	53.10	gold quality
leukocyte	CL:0000738	52.95	gold quality
endometrium	UBERON:0001295	52.49	silver quality
tonsil	UBERON:0002372	52.47	silver quality
lymph node	UBERON:0000029	51.83	gold quality
muscle of leg	UBERON:0001383	51.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.06

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.