FAM242F

Summary

FAM242F (family with sequence similarity 242 member F, HGNC:53876) is a long non-coding RNA gene on chromosome 9p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53876
Approved symbol	FAM242F
Name	family with sequence similarity 242 member F
Location	9p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000275239
Ensembl biotype	lncRNA
Entrez	105376064
RNAcentral	URS0000A773E0 — lncRNA, 357 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000611780, ENST00000615199, ENST00000615955, ENST00000620416, ENST00000748284, ENST00000748285, ENST00000748286, ENST00000748287, ENST00000748288, ENST00000748289

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000611780 — 3 exons

Exon	Start	End
ENSE00003725562	41694384	41694535
ENSE00003731017	41657708	41657984
ENSE00003736468	41698840	41698910

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 94.29.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.29	gold quality
colonic epithelium	UBERON:0000397	74.33	gold quality
left testis	UBERON:0004533	70.56	gold quality
testis	UBERON:0000473	70.19	gold quality
right testis	UBERON:0004534	68.55	gold quality
ventricular zone	UBERON:0003053	65.94	gold quality
placenta	UBERON:0001987	64.93	gold quality
bone marrow cell	CL:0002092	62.82	silver quality
tonsil	UBERON:0002372	62.53	gold quality
bone marrow	UBERON:0002371	61.84	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	59.12	gold quality
blood	UBERON:0000178	56.89	gold quality
liver	UBERON:0002107	55.47	silver quality
monocyte	CL:0000576	55.29	gold quality
primary visual cortex	UBERON:0002436	54.82	gold quality
right ovary	UBERON:0002118	54.70	gold quality
uterine cervix	UBERON:0000002	54.50	gold quality
vermiform appendix	UBERON:0001154	53.87	gold quality
gastrocnemius	UBERON:0001388	53.71	gold quality
islet of Langerhans	UBERON:0000006	53.60	gold quality
tibial artery	UBERON:0007610	53.24	gold quality
prefrontal cortex	UBERON:0000451	53.16	gold quality
thoracic aorta	UBERON:0001515	53.03	gold quality
ascending aorta	UBERON:0001496	52.91	gold quality
kidney	UBERON:0002113	52.60	gold quality
body of stomach	UBERON:0001161	52.35	gold quality
stomach	UBERON:0000945	52.12	gold quality
right uterine tube	UBERON:0001302	51.97	gold quality
left coronary artery	UBERON:0001626	51.69	gold quality
multicellular organism	UBERON:0000468	51.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.