FAM88F

Summary

FAM88F (family with sequence similarity 88 member F, HGNC:56162) is a long non-coding RNA gene on chromosome 9q13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56162
Approved symbol	FAM88F
Name	family with sequence similarity 88 member F
Location	9q13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226007
Ensembl biotype	lncRNA
Entrez	103908604
RNAcentral	URS0000BC4600 — lncRNA, 559 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 40 — 40 lncRNA

ENST00000420615, ENST00000446626, ENST00000450704, ENST00000754638, ENST00000754639, ENST00000754640, ENST00000754641, ENST00000754642, ENST00000754643, ENST00000754644, ENST00000754645, ENST00000754879, ENST00000754880, ENST00000754881, ENST00000754882, ENST00000754883, ENST00000754884, ENST00000754885, ENST00000754886, ENST00000754887, ENST00000754888, ENST00000754889, ENST00000754890, ENST00000754891, ENST00000754892, ENST00000754893, ENST00000754894, ENST00000754895, ENST00000754896, ENST00000754897, ENST00000754898, ENST00000754899, ENST00000754900, ENST00000754901, ENST00000754902, ENST00000754903, ENST00000754904, ENST00000754905, ENST00000754906, ENST00000754907

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000420615 — 3 exons

Exon	Start	End
ENSE00001654889	62532785	62533113
ENSE00001691544	62533658	62533858
ENSE00003871119	62532378	62532688

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 72.60.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortical plate	UBERON:0005343	72.60	gold quality
sural nerve	UBERON:0015488	71.55	gold quality
ventricular zone	UBERON:0003053	69.79	gold quality
ganglionic eminence	UBERON:0004023	68.27	gold quality
lower esophagus mucosa	UBERON:0035834	66.04	gold quality
skin of leg	UBERON:0001511	64.72	gold quality
zone of skin	UBERON:0000014	64.04	gold quality
left adrenal gland cortex	UBERON:0035825	63.50	gold quality
skin of abdomen	UBERON:0001416	62.93	gold quality
left adrenal gland	UBERON:0001234	62.66	gold quality
esophagus mucosa	UBERON:0002469	62.34	gold quality
right adrenal gland	UBERON:0001233	61.88	gold quality
kidney	UBERON:0002113	61.83	gold quality
adrenal gland	UBERON:0002369	61.67	gold quality
right adrenal gland cortex	UBERON:0035827	61.22	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.10	gold quality
cortex of kidney	UBERON:0001225	60.95	gold quality
adult mammalian kidney	UBERON:0000082	60.75	gold quality
left coronary artery	UBERON:0001626	59.74	gold quality
body of pancreas	UBERON:0001150	59.49	gold quality
skeletal muscle tissue	UBERON:0001134	59.24	gold quality
tibial nerve	UBERON:0001323	59.21	gold quality
pancreas	UBERON:0001264	59.19	gold quality
vagina	UBERON:0000996	58.98	gold quality
esophagus	UBERON:0001043	58.71	gold quality
islet of Langerhans	UBERON:0000006	58.24	gold quality
minor salivary gland	UBERON:0001830	57.92	gold quality
apex of heart	UBERON:0002098	57.78	gold quality
saliva-secreting gland	UBERON:0001044	57.76	gold quality
pituitary gland	UBERON:0000007	57.65	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.09

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.