FAR1-IT1

Summary

FAR1-IT1 (FAR1 intronic transcript 1, HGNC:41485) is a long non-coding RNA gene on chromosome 11p15.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41485
Approved symbol	FAR1-IT1
Name	FAR1 intronic transcript 1
Location	11p15.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254791
Ensembl biotype	lncRNA
Entrez	106478978
RNAcentral	URS00001DC634 — lncRNA, 368 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000525233

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525233 — 2 exons

Exon	Start	End
ENSE00002140975	13670112	13670149
ENSE00002166250	13669327	13669656

Expression profiles

Bgee: expression breadth ubiquitous, 115 present calls, max score 96.92.

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	96.92	gold quality
sural nerve	UBERON:0015488	83.99	gold quality
bone marrow cell	CL:0002092	81.09	gold quality
bone marrow	UBERON:0002371	79.40	gold quality
colonic epithelium	UBERON:0000397	77.65	gold quality
monocyte	CL:0000576	75.36	gold quality
leukocyte	CL:0000738	74.54	gold quality
calcaneal tendon	UBERON:0003701	67.63	gold quality
skeletal muscle tissue	UBERON:0001134	67.29	silver quality
uterine cervix	UBERON:0000002	65.60	silver quality
granulocyte	CL:0000094	65.37	gold quality
stromal cell of endometrium	CL:0002255	64.77	gold quality
blood	UBERON:0000178	64.29	gold quality
tonsil	UBERON:0002372	63.63	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.95	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.21	gold quality
islet of Langerhans	UBERON:0000006	60.92	gold quality
superior frontal gyrus	UBERON:0002661	59.83	gold quality
primary visual cortex	UBERON:0002436	59.07	gold quality
adrenal tissue	UBERON:0018303	58.97	gold quality
urinary bladder	UBERON:0001255	58.82	gold quality
muscle of leg	UBERON:0001383	57.93	gold quality
kidney	UBERON:0002113	57.83	gold quality
lymph node	UBERON:0000029	57.82	gold quality
prefrontal cortex	UBERON:0000451	57.58	gold quality
corpus callosum	UBERON:0002336	57.34	gold quality
liver	UBERON:0002107	57.24	gold quality
placenta	UBERON:0001987	56.32	gold quality
adult mammalian kidney	UBERON:0000082	55.38	gold quality
stomach	UBERON:0000945	54.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.