FAS
gene geneOn this page
Also known as CD95APO-1
Summary
FAS (Fas cell surface death receptor, HGNC:11920) is a protein-coding gene on chromosome 10q23.31, encoding Tumor necrosis factor receptor superfamily member 6 (P25445). Receptor for TNFSF6/FASLG.
The protein encoded by this gene is a member of the TNF-receptor superfamily. This receptor contains a death domain. It has been shown to play a central role in the physiological regulation of programmed cell death, and has been implicated in the pathogenesis of various malignancies and diseases of the immune system. The interaction of this receptor with its ligand allows the formation of a death-inducing signaling complex that includes Fas-associated death domain protein (FADD), caspase 8, and caspase 10. The autoproteolytic processing of the caspases in the complex triggers a downstream caspase cascade, and leads to apoptosis. This receptor has been also shown to activate NF-kappaB, MAPK3/ERK1, and MAPK8/JNK, and is found to be involved in transducing the proliferating signals in normal diploid fibroblast and T cells. Several alternatively spliced transcript variants have been described, some of which are candidates for nonsense-mediated mRNA decay (NMD). The isoforms lacking the transmembrane domain may negatively regulate the apoptosis mediated by the full length isoform.
Source: NCBI Gene 355 — RefSeq curated summary.
At a glance
- Gene–disease (curated): FAS-related autoimmune lymphoproliferative immune disorder (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 21
- Clinical variants (ClinVar): 528 total — 72 pathogenic, 45 likely-pathogenic (top 6% of genes corpus-wide)
- Regional missense constraint (gnomAD): 1 of 3 regions constrained (≈9% of expected missense variation)
- GTEx eGene: eQTL in 38 tissues, sQTL in 25 (q < 0.05)
- Phenotypes (HPO): 187
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 3 cancer types (inferred from mutation patterns)
- Dosage sensitivity (ClinGen): haploinsufficiency little evidence, triplosensitivity no evidence
- Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.37 (moderately constrained)
- MANE Select transcript:
NM_000043 - Interaction hub: 2,444 STRING partners (top 4% of genes corpus-wide)
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11920 |
| Approved symbol | FAS |
| Name | Fas cell surface death receptor |
| Location | 10q23.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CD95, APO-1 |
| Ensembl gene | ENSG00000026103 |
| Ensembl biotype | protein_coding |
| OMIM | 134637 |
| Entrez | 355 |
Gene structure
Transcript identifiers
Ensembl transcripts: 62 — 22 retained_intron, 20 protein_coding, 11 protein_coding_CDS_not_defined, 9 nonsense_mediated_decay
MANE Select: ENST00000652046
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 9, TSL 2: 1, TSL 3: 3, TSL 5: 6
ENST00000652046, ENST00000313771, ENST00000355279, ENST00000355740, ENST00000357339, ENST00000371857, ENST00000460510, ENST00000466081, ENST00000477270, ENST00000479522, ENST00000484444, ENST00000487314, ENST00000488877, ENST00000492756, ENST00000494410, ENST00000494799, ENST00000562983, ENST00000612663, ENST00000640140, ENST00000640250, ENST00000640681, ENST00000688239, ENST00000690268, ENST00000696723, ENST00000696741, ENST00000696742, ENST00000696743, ENST00000696744, ENST00000696767, ENST00000696768, ENST00000696769, ENST00000696770, ENST00000696771, ENST00000696772, ENST00000696773, ENST00000696774, ENST00000696775, ENST00000696776, ENST00000696777, ENST00000696778, ENST00000696779, ENST00000696780, ENST00000696781, ENST00000696782, ENST00000696783, ENST00000696992, ENST00000696993, ENST00000696994, ENST00000696995, ENST00000696996, ENST00000696997, ENST00000696998, ENST00000696999, ENST00000697035, ENST00000697036, ENST00000697037, ENST00000697093, ENST00000697094, ENST00000697095, ENST00000697096, ENST00000697097, ENST00001140016
RefSeq mRNA: 5 — MANE Select: NM_000043
NM_000043, NM_001320619, NM_001410956, NM_152871, NM_152872
CCDS: CCDS7393, CCDS7394, CCDS7395, CCDS91296, CCDS91297
Canonical transcript exons
ENST00000652046 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003465967 | 89007700 | 89007837 |
| ENSE00003500194 | 89010753 | 89010815 |
| ENSE00003513797 | 89013343 | 89013367 |
| ENSE00003579795 | 89008889 | 89008997 |
| ENSE00003586177 | 89010539 | 89010600 |
| ENSE00003666791 | 89003029 | 89003194 |
| ENSE00003673777 | 89011999 | 89012081 |
| ENSE00003969232 | 89014119 | 89017059 |
| ENSE00003969492 | 88990798 | 88990906 |
Expression profiles
Bgee: expression breadth ubiquitous, 280 present calls, max score 95.49.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 22.7395 / max 477.4839, expressed in 1670 samples.
Highest expression (Bgee): rectum, ovary, gall bladder, epithelium of nasopharynx, nasopharynx.
Genetic regulation across tissues (GTEx eQTL / sQTL)
FAS is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 38 tissues and its splicing (sQTL) in 25 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 63 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Adipose Subcutaneous | eqtl | 4.2e-62 | -0.41 | 10:88996277:G:GT |
| Adrenal Gland | eqtl | 8.4e-59 | -0.93 | 10:89011095:C:T |
| Brain Caudate basal ganglia | eqtl | 7.6e-50 | -0.89 | 10:88991152:C:T |
| Muscle Skeletal | eqtl | 4.0e-45 | -0.35 | 10:88995196:T:G |
| Skin Not Sun Exposed Suprapubic | eqtl | 7.1e-45 | +0.46 | 10:88999856:A:G |
| Brain Nucleus accumbens basal ganglia | eqtl | 3.8e-41 | -0.83 | 10:88991152:C:T |
| Breast Mammary Tissue | eqtl | 4.9e-40 | -0.43 | 10:88996389:T:G |
| Nerve Tibial | eqtl | 2.6e-39 | -0.38 | 10:88996277:G:GT |
| Brain Cortex | eqtl | 4.9e-39 | +0.68 | 10:88991759:C:T |
| Brain Putamen basal ganglia | eqtl | 7.7e-37 | -0.74 | 10:88991152:C:T |
| Testis | sqtl | 1.2e-32 | +0.76 | 10:89002619:G:T |
| Esophagus Muscularis | eqtl | 2.8e-32 | -0.40 | 10:88991759:C:T |
| Brain Anterior cingulate cortex BA24 | eqtl | 3.4e-32 | +0.71 | 10:88991759:C:T |
| Skin Sun Exposed Lower leg | eqtl | 1.7e-29 | +0.30 | 10:88999856:A:G |
| Esophagus Gastroesophageal Junction | eqtl | 9.8e-28 | +0.39 | 10:88999856:A:G |
| Adipose Visceral Omentum | eqtl | 1.4e-26 | +0.27 | 10:88999856:A:G |
| Brain Frontal Cortex BA9 | eqtl | 6.9e-25 | +0.58 | 10:88991759:C:T |
| Brain Amygdala | eqtl | 1.1e-24 | -0.87 | 10:88991152:C:T |
| Cells EBV-transformed lymphocytes | sqtl | 1.4e-21 | -0.85 | 10:89011095:C:T |
| Lung | sqtl | 2.5e-17 | -0.42 | 10:88995843:C:CA |
FANTOM5 promoters
9 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 106093 | 13.6601 | 1620 |
| 106091 | 4.7961 | 1141 |
| 106094 | 1.6816 | 655 |
| 106092 | 1.0299 | 368 |
| 106087 | 0.6574 | 286 |
| 106090 | 0.4604 | 252 |
| 106089 | 0.4085 | 241 |
| 106086 | 0.0269 | 4 |
| 106088 | 0.0186 | 3 |
Top tissues by expression
showing 100 of 294 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| rectum | UBERON:0001052 | 95.49 | gold quality |
| left ovary | UBERON:0002119 | 94.94 | gold quality |
| right ovary | UBERON:0002118 | 94.45 | gold quality |
| gall bladder | UBERON:0002110 | 93.94 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 93.90 | gold quality |
| nasopharynx | UBERON:0001728 | 93.88 | gold quality |
| right lung | UBERON:0002167 | 93.70 | gold quality |
| left adrenal gland | UBERON:0001234 | 93.67 | gold quality |
| stromal cell of endometrium | CL:0002255 | 93.46 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 93.19 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 93.13 | gold quality |
| right adrenal gland | UBERON:0001233 | 92.99 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 92.85 | gold quality |
| right uterine tube | UBERON:0001302 | 92.83 | gold quality |
| upper lobe of lung | UBERON:0008948 | 92.57 | gold quality |
| calcaneal tendon | UBERON:0003701 | 92.54 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 92.38 | gold quality |
| monocyte | CL:0000576 | 92.12 | gold quality |
| mononuclear cell | CL:0000842 | 92.03 | gold quality |
| leukocyte | CL:0000738 | 91.92 | gold quality |
| left uterine tube | UBERON:0001303 | 91.83 | gold quality |
| adrenal cortex | UBERON:0001235 | 91.82 | gold quality |
| colonic mucosa | UBERON:0000317 | 91.64 | gold quality |
| vermiform appendix | UBERON:0001154 | 91.57 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 91.50 | gold quality |
| adrenal gland | UBERON:0002369 | 91.50 | gold quality |
| body of uterus | UBERON:0009853 | 91.24 | gold quality |
| left coronary artery | UBERON:0001626 | 91.23 | gold quality |
| superficial temporal artery | UBERON:0001614 | 91.21 | gold quality |
| ovary | UBERON:0000992 | 91.05 | gold quality |
| endocervix | UBERON:0000458 | 91.02 | gold quality |
| blood | UBERON:0000178 | 90.97 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 90.88 | gold quality |
| right coronary artery | UBERON:0001625 | 90.74 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 90.74 | gold quality |
| omental fat pad | UBERON:0010414 | 90.43 | gold quality |
| lung | UBERON:0002048 | 90.41 | gold quality |
| peritoneum | UBERON:0002358 | 90.41 | gold quality |
| parietal pleura | UBERON:0002400 | 90.33 | gold quality |
| upper leg skin | UBERON:0004262 | 90.13 | gold quality |
| ectocervix | UBERON:0012249 | 90.10 | gold quality |
| popliteal artery | UBERON:0002250 | 90.07 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 90.06 | gold quality |
| tibial artery | UBERON:0007610 | 90.06 | gold quality |
| lymph node | UBERON:0000029 | 90.04 | gold quality |
| artery | UBERON:0001637 | 90.04 | gold quality |
| coronary artery | UBERON:0001621 | 89.82 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 89.78 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 89.49 | gold quality |
| pleura | UBERON:0000977 | 89.47 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 89.46 | gold quality |
| aorta | UBERON:0000947 | 89.12 | gold quality |
| colonic epithelium | UBERON:0000397 | 88.95 | gold quality |
| skin of hip | UBERON:0001554 | 88.83 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 88.62 | gold quality |
| uterine cervix | UBERON:0000002 | 88.36 | gold quality |
| skin of abdomen | UBERON:0001416 | 88.29 | gold quality |
| blood vessel layer | UBERON:0004797 | 88.16 | gold quality |
| thoracic aorta | UBERON:0001515 | 88.14 | gold quality |
| ascending aorta | UBERON:0001496 | 88.12 | gold quality |
| transverse colon | UBERON:0001157 | 88.07 | gold quality |
| tibial nerve | UBERON:0001323 | 87.93 | gold quality |
| lower lobe of lung | UBERON:0008949 | 87.91 | gold quality |
| large intestine | UBERON:0000059 | 87.85 | gold quality |
| vagina | UBERON:0000996 | 87.73 | gold quality |
| mucosa of stomach | UBERON:0001199 | 87.68 | gold quality |
| bone marrow | UBERON:0002371 | 87.68 | gold quality |
| granulocyte | CL:0000094 | 87.65 | gold quality |
| colon | UBERON:0001155 | 87.60 | gold quality |
| fallopian tube | UBERON:0003889 | 87.41 | gold quality |
| caecum | UBERON:0001153 | 87.26 | gold quality |
| sigmoid colon | UBERON:0001159 | 87.11 | gold quality |
| visceral pleura | UBERON:0002401 | 87.11 | gold quality |
| female reproductive system | UBERON:0000474 | 87.10 | gold quality |
| intestine | UBERON:0000160 | 86.90 | gold quality |
| uterus | UBERON:0000995 | 86.88 | gold quality |
| ventricular zone | UBERON:0003053 | 86.78 | gold quality |
| decidua | UBERON:0002450 | 86.77 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 86.62 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 86.55 | gold quality |
| esophagus mucosa | UBERON:0002469 | 86.36 | gold quality |
| cervix epithelium | UBERON:0004801 | 86.32 | gold quality |
| oral cavity | UBERON:0000167 | 86.23 | gold quality |
| esophagus | UBERON:0001043 | 86.22 | gold quality |
| squamous epithelium | UBERON:0006914 | 86.15 | gold quality |
| zone of skin | UBERON:0000014 | 86.05 | gold quality |
| bronchial epithelial cell | CL:0002328 | 86.01 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 85.97 | gold quality |
| lower esophagus | UBERON:0013473 | 85.96 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 85.95 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 85.94 | gold quality |
| endometrium | UBERON:0001295 | 85.85 | gold quality |
| myometrium | UBERON:0001296 | 85.79 | gold quality |
| spleen | UBERON:0002106 | 85.77 | gold quality |
| urinary bladder | UBERON:0001255 | 85.72 | gold quality |
| endometrium epithelium | UBERON:0004811 | 85.72 | silver quality |
| right atrium auricular region | UBERON:0006631 | 85.62 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 85.59 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 85.55 | gold quality |
| gingiva | UBERON:0001828 | 85.54 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9543 | yes | 12.58 |
| E-CURD-89 | no | 850.72 |
| E-CURD-120 | no | 30.64 |
| E-ANND-3 | no | 0.00 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 76 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM |
|---|---|---|
| Liver | tissue | 12.0 |
| Bone marrow | tissue | 10.7 |
| Thymus | tissue | 9.0 |
| Lymph node | tissue | 8.9 |
| Ovary | tissue | 8.7 |
| Adrenal gland | tissue | 8.7 |
| Lung | tissue | 8.2 |
| Rectum | tissue | 7.7 |
| Fallopian tube | tissue | 7.5 |
| Vagina | tissue | 7.4 |
| Cerebral cortex | tissue | 7.2 |
| Smooth muscle | tissue | 7.2 |
| Olfactory bulb | tissue | 7.2 |
| Retrosplenial cortex | tissue | 7.2 |
| Colon | tissue | 7.0 |
| Cerebellum | tissue | 6.6 |
| Hippocampus | tissue | 6.5 |
| Appendix | tissue | 6.5 |
| Retrosplenial and cingulate cortex | tissue | 6.3 |
| Prefrontal cortex | tissue | 6.0 |
| Putamen | tissue | 6.0 |
| Nucleus accumbens | tissue | 6.0 |
| Corpus callosum | tissue | 6.0 |
| Postcentral gyrus | tissue | 6.0 |
| Insular cortex | tissue | 6.0 |
| Gallbladder | tissue | 5.9 |
| Occipital cortex | tissue | 5.9 |
| Spinal cord | tissue | 5.8 |
| Tonsil | tissue | 5.7 |
| Basal ganglia | tissue | 5.6 |
| Medulla oblongata | tissue | 5.6 |
| Locus coeruleus | tissue | 5.6 |
| Amygdala | tissue | 5.4 |
| Hippocampal formation | tissue | 5.4 |
| Entorhinal cortex | tissue | 5.4 |
| Somatosensory cortex | tissue | 5.4 |
| Substantia nigra | tissue | 5.3 |
| Temporal cortex | tissue | 5.3 |
| Endometrium 1 | tissue | 5.2 |
| Motor cortex | tissue | 5.2 |
| Choroid plexus | tissue | 5.2 |
| Esophagus | tissue | 4.9 |
| Placenta | tissue | 4.9 |
| Ventral forebrain | tissue | 4.9 |
| Cervix | tissue | 4.7 |
| Adipose tissue | tissue | 4.7 |
| Septum | tissue | 4.7 |
| Thalamus | tissue | 4.6 |
| Superior colliculi | tissue | 4.6 |
| Midbrain | tissue | 4.5 |
| Pons | tissue | 4.3 |
| Urinary bladder | tissue | 4.3 |
| Hypothalamus | tissue | 4.3 |
| Spleen | tissue | 4.3 |
| Periaqueductal gray | tissue | 4.3 |
| Seminal vesicle | tissue | 3.9 |
| Breast | tissue | 3.8 |
| Small intestine | tissue | 3.5 |
| Prostate | tissue | 3.3 |
| Skin 1 | tissue | 2.7 |
Brain sub-regions (HPA Brain Atlas): detected in 288; highest nTPM — Flocculonodular lobe (389.7), Nucleus ambiguus (387.1), Nucleus raphe magnus (376.1), Angular gyrus (white matter) (369.7), Nuclei of the trapezoid body (367.2).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, ATF2, ATM, BHLHE40, CEBPA, CEBPB, CEBPG, CEBPZ, CNBP, DDIT3, DNMT1, EGR1, ESR1, ETS1, FOS, GLI1, GLI2, HDGF, HSF1, ID2, ID3, IRF8, JUN, MLXIPL, MYC, NFKB1, NFKB2, NFKB, NFKBIA, NFYA, NFYB, NFYC, NR3C1, PPARG, PURA, RELA, SMAD5, SP1, SP3, SREBF1
miRNA regulators (miRDB)
Targeting FAS by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 116 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-196A-5P | 100.00 | 68.16 | 684 |
| HSA-MIR-196B-5P | 100.00 | 68.16 | 681 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-568 | 99.98 | 69.86 | 2084 |
| HSA-MIR-6888-3P | 99.97 | 65.95 | 1170 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-3605-5P | 99.96 | 67.12 | 932 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-545-3P | 99.95 | 70.74 | 2783 |
| HSA-MIR-22-3P | 99.93 | 68.13 | 917 |
| HSA-MIR-6508-5P | 99.92 | 70.67 | 2465 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-374A-5P | 99.90 | 71.34 | 2923 |
| HSA-MIR-17-5P | 99.89 | 73.83 | 2665 |
| HSA-MIR-106B-5P | 99.88 | 74.72 | 2795 |
| HSA-MIR-20A-5P | 99.88 | 74.76 | 2769 |
| HSA-MIR-20B-5P | 99.88 | 74.01 | 2621 |
| HSA-MIR-519D-3P | 99.88 | 73.97 | 2607 |
| HSA-MIR-526B-3P | 99.88 | 74.06 | 2587 |
| HSA-MIR-93-5P | 99.88 | 73.98 | 2606 |
| HSA-LET-7A-2-3P | 99.87 | 70.53 | 1921 |
Functional genomics
gnomAD constraint: pLI 1, LOEUF 0.372, missense Z 1.26 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000652046 splits into 3 regions with different missense tolerance; 1 is missense-constrained (≈9% of the expected missense variation). Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 10:88,990,877–89,014,218 | 276 / 300.1 | 0.92 | no |
| 10:89,014,219–89,014,303 | 11 / 33.2 | 0.33 | yes (p 1.1e-04) |
| 10:89,014,304–89,014,447 | 52 / 52.7 | 0.99 | no |
ClinGen dosage: haploinsufficiency 1 (little evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map |
Literature-anchored findings (GeneRIF, showing 40)
- A significant correlation with differentiation status of the tumor was found for the p53 aberration but not for CD95 expression. (PMID:11692157)
- Regulation of Fas expression by STAT3 and c-Jun is mediated by phosphatidylinositol 3-kinase-AKT signaling (PMID:11733515)
- its polymorphism may contributes to the pathogenesis of spondyloarthropathy (PMID:11771526)
- induction of gene expression by doxorubicin in endothelial cells through a p53-dependent mechanism (PMID:11779855)
- Soluble Fas antigen (sFAS) in the serum from patients with adrenal tumors. (PMID:11782802)
- Butyrate induced apoptosis via the Fas/Fas L system and potentiated Fas-triggered apoptosis in MCF-7 cells. (PMID:11786482)
- Expression of Fas and Fas ligand in esophageal tissue mucosa and carcinomas (PMID:11788891)
- Cytochrome c release upon Fas receptor activation (PMID:11790791)
- expression was significantly increased in neonates with pontosubicular neuron necrosis (PMID:11809905)
- FAS germline mutations have been associated with the development of autoimmune lymphoproliferative syndrome (ALPS). (PMID:11830507)
- Participation of Fas-mediated apoptotic pathway in KB, a human head and neck squamous cell carcinoma cell line, after irradiation (PMID:11836578)
- expression associated with apoptosis in sun-exposed keratinocytes (PMID:11857317)
- myelodysplastic syndrome CD34(+)-derived erythroid progenitors underwent abnormal Fas-dependent apoptosis during differentiation that could be responsible for the impaired erythropoiesis. (PMID:11861273)
- Met sequesters Fas, preventing apoptosis. (PMID:11864613)
- Overexpression of the mouse Fas gene in human Hep3B hepatoma cells overcomes their resistance to Fas-mediated apoptosis. (PMID:11867183)
- Plasma FasL levels were significantly high in patients with grade II - IV graft-versus-host disease. (PMID:11877055)
- Latent sensitivity to Fas-mediated apoptosis after CD40 ligation may explain activity of CD154 gene therapy in chronic lymphocytic leukemia (PMID:11891278)
- upregulation of Fas by IFN-gamma in SNU-638 may accelerate the apoptosis pathway through the Fas and FasL interaction between gastric cancer cells and immune cells (PMID:11895550)
- Decreased function of Fas in patients displaying delayed progression of HIV-induced immune deficiency (PMID:11920253)
- Mature dendritic cells are protected from Fas/CD95-mediated apoptosis by upregulation of Bcl-X(L). (PMID:11941452)
- Fas engagement increases expression of interleukin-6 in human glioma cells. (PMID:11949822)
- Differential expressions of Fas and Fas ligand in human placenta (PMID:11961305)
- Genetic polymorphisms of Fas (CD95) in human longevity (PMID:11965496)
- HLA class II signals sensitize B lymphocytes to apoptosis via CD95 (PMID:11975981)
- Endotoxin-induced lymphopenia was constituted by cells with the highest rates of disappearance were characterized by an activated phenotype (CD45RA(-) CD45RO(+)) as well as a phenotype linked to apoptosis (CD95(+) CD28(-)) (PMID:11986289)
- Our results indicate that Fas-mediated apoptosis is important for endometrial cycling and suggest that dysregulation of the Fas/FasL interactions may have an important role in the development of endometrial cancer. (PMID:11994542)
- “trophoblast-cytokine-Fas/FasL triad” determines the ability of the Fas/FasL system to regulate trophoblast viability (PMID:12021072)
- data suggest that disruption of the cytoskeleton causes apoptosis via activation of CD95 and enhances UV-induced apoptosis, possibly via aiding receptor clustering (PMID:12032668)
- Recipient gene polymorphism and acute renal allograft rejection (PMID:12034188)
- alteration associated with nodal metastasis in non-small cell lung cancer (PMID:12037669)
- Data indicate that the apoptosis program in T cells includes the shedding/secretion of different forms of Fas to spread a death signal. (PMID:12049185)
- Fas defects may play a role in the pathogenesis of mycosis fungoides (PMID:12060388)
- FLIP switches Fas-mediated glucose signaling in human pancreatic beta cells from apoptosis to cell replication. (PMID:12060768)
- Fas promoter -670A/G polymorphism was significantly associated with systemic lupus erythematosus (SLE), suggesting a possibility that Fas promoter contributes, at least in part, to the pathogenesis of SLE (PMID:12064832)
- These results suggest that Fas is involved in neuronal apoptosis in the developing human brain. (PMID:12067476)
- Frequent mutations of Fas gene in nasal NK/T cell lymphoma (PMID:12096347)
- Interferon-gamma increases its expression in B-leukemia cells. (PMID:12096925)
- the death effector domain of FADD is involved in interaction with Fas. (PMID:12107169)
- CCR5 mediates Fas- and caspase-8 dependent apoptosis of both uninfected and HIV infected primary human CD4 T cells (PMID:12131184)
- the role of Fas/Fas ligand (FasL) in tum orgenesis, immune escape, counterattack in colonic cancer (PMID:12137598)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cd27 | ENSDARG00000105423 |
| mus_musculus | Fas | ENSMUSG00000024778 |
| rattus_norvegicus | Fas | ENSRNOG00000019142 |
Paralogs (21): TNFRSF1B (ENSG00000028137), TNFRSF9 (ENSG00000049249), RELT (ENSG00000054967), NGFR (ENSG00000064300), TNFRSF1A (ENSG00000067182), CD40 (ENSG00000101017), TNFRSF10A (ENSG00000104689), LTBR (ENSG00000111321), TNFRSF10B (ENSG00000120889), TNFRSF8 (ENSG00000120949), CD27 (ENSG00000139193), TNFRSF11A (ENSG00000141655), TNFRSF21 (ENSG00000146072), TNFRSF14 (ENSG00000157873), TNFRSF11B (ENSG00000164761), TNFRSF10D (ENSG00000173530), TNFRSF10C (ENSG00000173535), TNFRSF4 (ENSG00000186827), TNFRSF18 (ENSG00000186891), TNFRSF25 (ENSG00000215788), TNFRSF6B (ENSG00000243509)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:95484) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 185 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| enlarged lymph nodes | 20 |
| increased anti-nuclear antigen antibody level | 15 |
| premature death | 14 |
| glomerulonephritis | 14 |
| enlarged spleen | 11 |
| increased anti-double stranded DNA antibody level | 11 |
| increased immunoglobulin level | 9 |
| increased autoantibody level | 9 |
| increased IgG level | 7 |
| increased IgM level | 6 |
| renal glomerular immunoglobulin deposits | 6 |
| increased urine protein level | 5 |
| increased anti-single stranded DNA antibody level | 5 |
| autoimmune response | 4 |
| abnormal hypersensitivity reaction | 4 |
| increased double-negative T cell number | 4 |
| lymph node hyperplasia | 4 |
| increased IgG1 level | 4 |
| increased IgG2a level | 4 |
| abnormal stria vascularis morphology | 3 |
| skin lesions | 3 |
| salivary gland inflammation | 3 |
| increased spleen weight | 3 |
| increased lymphocyte cell number | 3 |
| abnormal renal glomerulus morphology | 3 |
+160 more (showing top 25).
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Macaca nemestrina | Q9BDN0 | 98.5% | Diamond |
| Macaca fascicularis | Q9TSN4 | 98.5% | Diamond |
| Cercocebus atys | Q9BDN4 | 97.6% | Diamond |
| Macaca mulatta | Q9BDP2 | 94.3% | Diamond |
| Sus scrofa | O77736 | 62.8% | Diamond |
| Bos taurus | P51867 | 62.6% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| FAS-AS1 | ncRNA | 100302740 |
| STAMBPL1 | protein-coding | 57559 |
| ACTA2 | protein-coding | 59 |
| ACTA2-AS1 | ncRNA | 100132116 |
| MIR4679-1 | ncRNA | 100616128 |
| MIR4679-2 | ncRNA | 100616192 |
| ANKRD22 | protein-coding | 118932 |
| LIPM | protein-coding | 340654 |
Protein
Protein identifiers
Tumor necrosis factor receptor superfamily member 6 — P25445 (reviewed: P25445)
Alternative names: Apo-1 antigen, Apoptosis-mediating surface antigen FAS, FASLG receptor
All UniProt accessions (15): A0A087WTM9, A0A8Q3SIR6, A0A8Q3SIY4, A0A8Q3SJI5, A0A8Q3WLI5, A0A8Q3WLK1, A0A8Q3WLK6, A0A8Q3WLL4, A0A8Q3WM13, A0A8V8TKJ0, A0A8V8TKN4, A0A8V8TM64, P25445, K9J972, Q59FU8
UniProt curated annotations — full annotation on UniProt →
Function. Receptor for TNFSF6/FASLG. The adapter molecule FADD recruits caspase CASP8 to the activated receptor. The resulting death-inducing signaling complex (DISC) performs CASP8 proteolytic activation which initiates the subsequent cascade of caspases (aspartate-specific cysteine proteases) mediating apoptosis. FAS-mediated apoptosis may have a role in the induction of peripheral tolerance, in the antigen-stimulated suicide of mature T-cells, or both. The secreted isoforms 2 to 6 block apoptosis (in vitro).
Subunit / interactions. Component of the death-induced signaling complex (DISC) composed of cell surface receptor FAS/CD95, adapter protein FADD and the CASP8 protease; recruitment of CASP8 to the complex is required for processing of CASP8 into the p18 and p10 subunits. Interacts directly (via DED domain) with NOL3 (via CARD domain); inhibits death-inducing signaling complex (DISC) assembly by inhibiting the increase in FAS-FADD binding induced by FAS activation. Binds DAXX. Interacts with HIPK3. Part of a complex containing HIPK3 and FADD. Binds RIPK1 and FAIM2. Interacts with BABAM2 and FEM1B. Interacts with CALM. In the absence of stimulation, interacts with BIRC2, DDX3X and GSK3B. The interaction with BIRC2 and DDX3X is further enhanced upon receptor stimulation and accompanied by DDX3X and BIRC2 cleavage.
Subcellular location. Cell membrane. Membrane raft Secreted Secreted Secreted Secreted Secreted.
Tissue specificity. Isoform 1 and isoform 6 are expressed at equal levels in resting peripheral blood mononuclear cells. After activation there is an increase in isoform 1 and decrease in the levels of isoform 6.
Post-translational modifications. (Microbial infection) Glycosylated at Arg-250 by enteropathogenic E.coli protein NleB1: arginine GlcNAcylation prevents homotypic/heterotypic death domain interactions. Palmitoylated. Palmitoylation by ZDHHC7 prevents the lysosomal degradation of FAS regulating its expression at the plasma membrane. N- and O-glycosylated. O-glycosylated with core 1 or possibly core 8 glycans.
Disease relevance. Autoimmune lymphoproliferative syndrome 1A (ALPS1A) [MIM:601859] A disorder of apoptosis that manifests in early childhood and results in the accumulation of autoreactive lymphocytes. It is characterized by non-malignant lymphadenopathy with hepatosplenomegaly, and autoimmune hemolytic anemia, thrombocytopenia and neutropenia. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. Contains a death domain involved in the binding of FADD, and maybe to other cytosolic adapter proteins.
Miscellaneous. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. Dominant negative isoform, resistant to Fas-mediated apoptosis.
Isoforms (7)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P25445-1 | 1 | yes |
| P25445-2 | 2, del2, D | |
| P25445-3 | 3, del3, E | |
| P25445-4 | 4, B | |
| P25445-5 | 5, C | |
| P25445-6 | 6, TMdel, A | |
| P25445-7 | 7, FasExo8Del |
RefSeq proteins (5): NP_000034, NP_001307548, NP_001397885, NP_690610, NP_690611 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000488 | Death_dom | Domain |
| IPR001368 | TNFR/NGFR_Cys_rich_reg | Domain |
| IPR008063 | Fas_rcpt | Family |
| IPR011029 | DEATH-like_dom_sf | Homologous_superfamily |
| IPR033998 | TNFRSF6_death | Domain |
| IPR033999 | TNFRSF6_N | Domain |
Pfam: PF00020, PF00531
UniProt features (101 total): sequence variant 36, splice variant 11, helix 9, disulfide bond 8, mutagenesis site 8, strand 6, glycosylation site 4, modified residue 3, repeat 3, region of interest 2, topological domain 2, sequence conflict 2, turn 2, signal peptide 1, chain 1, lipid moiety-binding region 1, transmembrane region 1, domain 1
Structure
Experimental structures (PDB)
7 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 3TJE | Crystal structure of Fas receptor extracellular domain in complex with Fab E09 | X-RAY DIFFRACTION | 1.93 |
| 3THM | Crystal structure of Fas receptor extracellular domain in complex with Fab EP6b_B01 | X-RAY DIFFRACTION | 2.1 |
| 3EWT | Crystal Structure of calmodulin complexed with a peptide | X-RAY DIFFRACTION | 2.4 |
| 3EZQ | Crystal Structure of the Fas/FADD Death Domain Complex | X-RAY DIFFRACTION | 2.73 |
| 9NCQ | Cryo-EM structure of Fas-FADD complex | ELECTRON MICROSCOPY | 3.51 |
| 1DDF | FAS DEATH DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE | SOLUTION NMR | |
| 2NA7 | Transmembrane domain of human Fas/CD95 death receptor | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P25445-F1 | 78.21 | 0.40 |
Antibody-complex structures (SAbDab)
2 antibodies co-crystallized with this protein: 3THM, 3TJE
Human Protein Atlas
Protein class: CD markers, Predicted membrane proteins, Predicted secreted proteins, Predicted intracellular proteins, Cancer-related genes, Candidate cancer biomarkers, Candidate cardiovascular disease genes, Disease related genes, Human disease related genes, Primary immunodeficiency
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): plasma membrane; cytosol; nuclear bodies
Antibody reliability (HPA): IH uncertain · IF supported
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4)
| Type | Positions |
|---|---|
| Phosphoserine | 209, 225 |
| Phosphothreonine | 214 |
| S-palmitoyl cysteine | 199 |
Disulfide bonds (8)
| Type | Positions |
|---|---|
| Disulfide bond | 59–73, 63–82, 85–101, 104–119, 107–127, 129–143, 146–157, 149–165 |
Glycosylation sites (4)
| Type | Positions |
|---|---|
| O-linked (galnac…) threonine | 28 |
| N-linked (glcnac…) asparagine | 118, 136 |
| (microbial infection) n-beta-linked (glcnac) arginine | 250 |
Mutagenesis-validated functional residues (8)
| Position | Phenotype |
|---|---|
| 199 | loss of palmitoylation. |
| 250 | abolished glcnacylation by e.coli nleb1. |
| 250 | strongly decreased interaction with fadd. |
| 261 | loss of interaction with fadd. |
| 283 | loss of interaction with fadd. |
| 287 | strongly decreased interaction with fadd. |
| 291 | decreased interaction with fadd. |
| 313 | constitutive activation. promotes apoptosis, both in the presence and in the absence of stimulation by a ligand. |
Function
Pathways and Gene Ontology
Reactome pathways
7 curated (TAS) of 19; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
19 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-5218900 | CASP8 activity is inhibited | curated |
| R-HSA-140534 | Caspase activation via Death Receptors in the presence of ligand | curated |
| R-HSA-69416 | Dimerization of procaspase-8 | curated |
| R-HSA-75157 | FasL/ CD95L signaling | curated |
| R-HSA-5213460 | RIPK1-mediated regulated necrosis | curated |
| R-HSA-3371378 | Regulation by c-FLIP | curated |
| R-HSA-6803211 | TP53 Regulates Transcription of Death Receptors and Ligands | curated |
| R-HSA-109581 | Apoptosis | — |
| R-HSA-5357769 | Caspase activation via extrinsic apoptotic signalling pathway | — |
| R-HSA-73887 | Death Receptor Signaling | — |
| R-HSA-74160 | Gene expression (Transcription) | — |
| R-HSA-212436 | Generic Transcription Pathway | — |
| R-HSA-5357801 | Programmed Cell Death | — |
| R-HSA-73857 | RNA Polymerase II Transcription | — |
| R-HSA-5218859 | Regulated Necrosis | — |
| R-HSA-5675482 | Regulation of necroptotic cell death | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-5633008 | TP53 Regulates Transcription of Cell Death Genes | — |
| R-HSA-3700989 | Transcriptional Regulation by TP53 | — |
MSigDB gene sets: 887 (showing top):
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_REGULATION_OF_STRESS_ACTIVATED_PROTEIN_KINASE_SIGNALING_CASCADE, GOBP_RESPONSE_TO_PEPTIDE, GOBP_CELLULAR_RESPONSE_TO_EXTERNAL_STIMULUS, KEGG_MAPK_SIGNALING_PATHWAY, GOBP_POSITIVE_REGULATION_OF_REACTIVE_OXYGEN_SPECIES_BIOSYNTHETIC_PROCESS, MODULE_64, GOBP_T_CELL_HOMEOSTASIS, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP, CHUANG_OXIDATIVE_STRESS_RESPONSE_UP, GRAESSMANN_RESPONSE_TO_MC_AND_SERUM_DEPRIVATION_UP, GOBP_LYMPHOCYTE_HOMEOSTASIS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_UP, HALMOS_CEBPA_TARGETS_UP
GO Biological Process (20): apoptotic process (GO:0006915), activation-induced cell death of T cells (GO:0006924), immune response (GO:0006955), signal transduction (GO:0007165), extrinsic apoptotic signaling pathway via death domain receptors (GO:0008625), regulation of stress-activated MAPK cascade (GO:0032872), cellular response to amino acid starvation (GO:0034198), Fas signaling pathway (GO:0036337), regulation of apoptotic process (GO:0042981), positive regulation of apoptotic process (GO:0043065), negative regulation of apoptotic process (GO:0043066), protein-containing complex assembly (GO:0065003), cellular response to mechanical stimulus (GO:0071260), cellular response to hyperoxia (GO:0071455), motor neuron apoptotic process (GO:0097049), extrinsic apoptotic signaling pathway (GO:0097191), necroptotic signaling pathway (GO:0097527), positive regulation of reactive oxygen species biosynthetic process (GO:1903428), positive regulation of apoptotic signaling pathway (GO:2001235), tumor necrosis factor-mediated signaling pathway (GO:0033209)
GO Molecular Function (7): tumor necrosis factor receptor activity (GO:0005031), calmodulin binding (GO:0005516), kinase binding (GO:0019900), signaling receptor activity (GO:0038023), identical protein binding (GO:0042802), transmembrane signaling receptor activity (GO:0004888), protein binding (GO:0005515)
GO Cellular Component (10): cytosol (GO:0005829), plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), cell surface (GO:0009986), death-inducing signaling complex (GO:0031264), CD95 death-inducing signaling complex (GO:0031265), membrane raft (GO:0045121), extracellular exosome (GO:0070062), extracellular region (GO:0005576), membrane (GO:0016020)
Reactome top-level categories
14 top-level categories:
| Category | Pathways |
|---|---|
| Caspase activation via Death Receptors in the presence of ligand | 2 |
| Programmed Cell Death | 2 |
| Caspase activation via extrinsic apoptotic signalling pathway | 1 |
| Regulated Necrosis | 1 |
| Regulation of necroptotic cell death | 1 |
| TP53 Regulates Transcription of Cell Death Genes | 1 |
| Death Receptor Signaling | 1 |
| RNA Polymerase II Transcription | 1 |
| Generic Transcription Pathway | 1 |
| Apoptosis | 1 |
| Transcriptional Regulation by TP53 | 1 |
| RIPK1-mediated regulated necrosis | 1 |
| Gene expression (Transcription) | 1 |
| Signal Transduction | 1 |
GO top-level categories
showing 60 of 63 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| apoptotic signaling pathway | 3 |
| apoptotic process | 3 |
| cell surface receptor signaling pathway | 2 |
| regulation of apoptotic process | 2 |
| protein binding | 2 |
| programmed cell death | 1 |
| execution phase of apoptosis | 1 |
| T cell homeostasis | 1 |
| T cell apoptotic process | 1 |
| immune system process | 1 |
| response to stimulus | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| extrinsic apoptotic signaling pathway | 1 |
| regulation of MAPK cascade | 1 |
| stress-activated MAPK cascade | 1 |
| regulation of stress-activated protein kinase signaling cascade | 1 |
| cellular response to starvation | 1 |
| response to amino acid starvation | 1 |
| regulation of programmed cell death | 1 |
| positive regulation of programmed cell death | 1 |
| negative regulation of programmed cell death | 1 |
| cellular component assembly | 1 |
| protein-containing complex organization | 1 |
| response to mechanical stimulus | 1 |
| cellular response to abiotic stimulus | 1 |
| cellular response to external stimulus | 1 |
| cellular response to increased oxygen levels | 1 |
| response to hyperoxia | 1 |
| cellular response to chemical stress | 1 |
| neuron apoptotic process | 1 |
| signal transduction | 1 |
| necroptotic process | 1 |
| positive regulation of biosynthetic process | 1 |
| reactive oxygen species biosynthetic process | 1 |
| regulation of reactive oxygen species biosynthetic process | 1 |
| positive regulation of reactive oxygen species metabolic process | 1 |
| positive regulation of signal transduction | 1 |
| positive regulation of apoptotic process | 1 |
| regulation of apoptotic signaling pathway | 1 |
| cytokine-mediated signaling pathway | 1 |
| cellular response to tumor necrosis factor | 1 |
| death receptor activity | 1 |
| tumor necrosis factor-mediated signaling pathway | 1 |
| tumor necrosis factor binding | 1 |
| enzyme binding | 1 |
| molecular transducer activity | 1 |
| signaling receptor activity | 1 |
| binding | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane | 1 |
| cell surface | 1 |
| side of membrane | 1 |
| plasma membrane protein complex | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 22 of 37 annotations. The rest are phylogenetic / computational / electronic (IEA).
22 experimentally-supported GO terms:
Protein interactions and networks
STRING
showing 15 of 2,444 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FAS | FASLG | P48023 | 940 |
| FAS | FADD | Q13158 | 894 |
| FAS | CASP8 | Q14790 | 894 |
| FAS | TNFRSF1A | P19438 | 868 |
| FAS | TNF | P01375 | 849 |
| FAS | CASP3 | P42574 | 848 |
| FAS | CD4 | P01730 | 829 |
| FAS | CD8A | P01732 | 829 |
| FAS | CD27 | P26842 | 799 |
| FAS | CFLAR | O15519 | 787 |
| FAS | TNFSF10 | P50591 | 781 |
| FAS | CASP9 | P55211 | 775 |
| FAS | CASP10 | Q92851 | 766 |
| FAS | CYCS | P00001 | 763 |
| FAS | TRADD | Q15628 | 743 |
IntAct
Human interaction partners of FAS in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
showing 30 of 44 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| FADD | physical association | 0.960 | 20 |
| CASP8 | physical association | 0.920 | 6 |
| FASLG | association | 0.760 | 5 |
| DAXX | physical association | 0.670 | 3 |
| PTPN13 | physical association | 0.590 | 3 |
| CALM1 | physical association | 0.580 | 4 |
| PML-RAR | physical association | 0.580 | 3 |
| MAP3K5 | physical association | 0.540 | 2 |
| PML | physical association | 0.520 | 4 |
| CAV1 | colocalization | 0.460 | 3 |
| SRC | physical association | 0.400 | 2 |
| PDCD6 | physical association | 0.400 | 1 |
| YES1 | physical association | 0.400 | 1 |
| APOA5 | physical association | 0.370 | 1 |
| ATP6V0B | physical association | 0.370 | 1 |
| BAG6 | physical association | 0.370 | 1 |
| CCND3 | physical association | 0.370 | 1 |
| GADD45A | physical association | 0.370 | 1 |
| HNRNPC | physical association | 0.370 | 1 |
| MBD4 | physical association | 0.370 | 1 |
| RIPK1 | physical association | 0.370 | 1 |
| SUMO1 | physical association | 0.370 | 1 |
| TCAP | physical association | 0.370 | 1 |
| TMX1 | physical association | 0.370 | 1 |
| UBQLN1 | physical association | 0.370 | 1 |
| CFLAR | association | 0.350 | 6 |
| FYN | colocalization | 0.350 | 1 |
| INPP5D | association | 0.350 | 1 |
| PEX1 | association | 0.350 | 1 |
| AKT1 | proximity | 0.270 | 1 |
BioGRID (518 interactions; top human partners by supporting records): FADD (Affinity Capture-MS; 25 records), CASP8 (Affinity Capture-MS; 14 records), DAXX (Co-localization; 11 records), FASLG (Co-localization; 7 records), UBAC1 (Proximity Label-MS; 6 records), FAF1 (Affinity Capture-Western; 5 records), RELA (Proximity Label-MS; 4 records), SPATA5L1 (Affinity Capture-MS; 4 records), TRIP6 (Affinity Capture-Western; 4 records), TUBB2A (Affinity Capture-MS; 4 records), TUBB2B (Affinity Capture-MS; 4 records), UBE2I (Affinity Capture-Western; 4 records), ARF5 (Affinity Capture-MS; 3 records), C17orf75 (Affinity Capture-MS; 3 records), C19orf52 (Affinity Capture-MS; 3 records)
SIGNOR signaling
showing 14 of 16 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| FAS | up-regulates | MAP3K5 | binding |
| AKT | down-regulates | FAS | |
| FAS | “up-regulates activity” | FADD | binding |
| RIPK1 | “up-regulates activity” | FAS | binding |
| FAS | up-regulates | RASSF1 | |
| FASLG | “up-regulates activity” | FAS | binding |
| FAS | “up-regulates activity” | FAS | binding |
| AKT1 | down-regulates | FAS | |
| EGR1 | “down-regulates quantity by repression” | FAS | “transcriptional regulation” |
| DAXX | down-regulates | FAS | binding |
| FAS | up-regulates | DAXX | |
| TP53 | “up-regulates quantity by expression” | FAS | “transcriptional regulation” |
| FAS | “up-regulates activity” | RIPK1 | binding |
| MLXIPL | “up-regulates quantity by expression” | FAS | “transcriptional regulation” |
Protein complexes (CORUM) (6)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
6 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| DISC complex (FAS, FADD, CASP8, CFLAR), membrane-associated, CD95L induced | 4 | CASP8, CFLAR, FADD, FAS |
| CASP8-CASP10-FADD-FAS complex | 4 | FAS, CASP10, CASP8, FADD |
| DISC complex (FAS, FADD, CASP8) | 3 | CASP8, FADD, FAS |
| CASP10-FADD-FAS complex | 3 | CASP10, FADD, FAS |
| FAS-TNFSF13 complex | 2 | FAS, TNFSF13 |
| CD40-FAS complex | 2 | CD40, FAS |
Ligand–receptor pairs (CellPhoneDB) (1)
Curated ligand–receptor partners (cell-cell communication), distinct from the protein–protein interactions above.
1 ligand–receptor pairs:
| Partner | This gene’s role | Signaling class |
|---|---|---|
| FASLG | receptor | Signaling by Tumor necrosis factor |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 44 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| RIPK1-mediated regulated necrosis | 5 | 57.1× | 3e-06 |
| Signaling by ERBB2 | 5 | 43.3× | 8e-06 |
| VEGFA-VEGFR2 Pathway | 7 | 24.4× | 2e-06 |
| Diseases of signal transduction by growth factor receptors and second messengers | 6 | 8.5× | 1e-03 |
| Signaling by Receptor Tyrosine Kinases | 6 | 7.8× | 1e-03 |
| Cytokine Signaling in Immune system | 7 | 7.1× | 8e-04 |
| Hemostasis | 6 | 5.4× | 7e-03 |
| Infectious disease | 7 | 4.3× | 8e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of extrinsic apoptotic signaling pathway | 6 | 63.5× | 1e-07 |
| extrinsic apoptotic signaling pathway via death domain receptors | 6 | 56.0× | 2e-07 |
| T cell costimulation | 5 | 43.5× | 1e-05 |
| extrinsic apoptotic signaling pathway | 6 | 42.8× | 1e-06 |
| apoptotic signaling pathway | 8 | 41.8× | 1e-08 |
| positive regulation of neuron apoptotic process | 5 | 31.6× | 4e-05 |
| negative regulation of angiogenesis | 5 | 19.6× | 4e-04 |
| MAPK cascade | 5 | 17.8× | 6e-04 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 3 cancer types — CESC, DLBCLNOS, MLYM.
intOGen’s role is a computational inference from cohort mutation patterns and may diverge from the gene’s curated/literature role; read it alongside the evidence above.
Genetic variants
Variant evidence for FAS: 528 ClinVar records (117 pathogenic / likely pathogenic); 21 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
528 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 72 |
| Likely pathogenic | 45 |
| Uncertain significance | 227 |
| Likely benign | 101 |
| Benign | 32 |
Top pathogenic / likely-pathogenic (15)
Showing the 15 best-reviewed of 117 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 872242 | NM_000043.6(FAS):c.46_47del (p.Val15_Ala16insTer) | Pathogenic | criteria provided, multiple submitters, no conflicts | 4 |
| 16514 | NM_000043.6(FAS):c.651+2T>C | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 1457614 | NM_000043.6(FAS):c.528G>A (p.Trp176Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 265400 | NM_000043.6(FAS):c.879_880del (p.Leu294fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 1067934 | NM_000043.6(FAS):c.778G>A (p.Asp260Asn) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 3765194 | NM_000043.6(FAS):c.586C>T (p.Gln196Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 860668 | NM_000043.6(FAS):c.776T>C (p.Ile259Thr) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 2136913 | NM_000043.6(FAS):c.404G>A (p.Cys135Tyr) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 2573797 | NM_000043.6(FAS):c.794A>G (p.Asp265Gly) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 3370437 | NM_000043.6(FAS):c.748C>G (p.Arg250Gly) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 16505 | NM_000043.6(FAS):c.749G>C (p.Arg250Pro) | Pathogenic | criteria provided, single submitter | 4 |
| 16498 | NM_000043.6(FAS):c.334+2dup | Pathogenic | criteria provided, single submitter | 2 |
| 16501 | NM_000043.6(FAS):c.817C>T (p.Gln273Ter) | Pathogenic | criteria provided, single submitter | 2 |
| 16504 | NM_000043.6(FAS):c.779A>T (p.Asp260Val) | Pathogenic | criteria provided, single submitter | 2 |
| 2130948 | NM_000043.6(FAS):c.676+1G>C | Pathogenic | criteria provided, single submitter | 2 |
Per-variant reference — Sugi Variant
Explore FAS’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 30 predictions of 895):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 10:88990907–88990908 | donor_loss | 1.0000 | 5 |
| 10:89003027–89003028 | acceptor_loss | 1.0000 | 6 |
| 10:89003195–89003196 | donor_loss | 1.0000 | 4 |
| 10:89010537 | acceptor_loss | 1.0000 | |
| 10:89010598 | donor_gain | 1.0000 | |
| 10:89010601–89010602 | donor_loss | 1.0000 | 4 |
| 10:89011631–89011632 | acceptor_gain | 1.0000 | 2 |
| 10:89014117–89014118 | acceptor_loss | 1.0000 | 5 |
| 10:89003195 | donor_loss | 0.9900 | |
| 10:89008124 | acceptor_gain | 0.9900 |
AlphaMissense
393 missense substitutions predicted likely pathogenic (of 2,224 scored), across 110 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D260 | 8 | 0.821 | 0.931 |
| D108 | 8 | 0.746 | 0.817 |
| W281 | 7 | 0.961 | 0.985 |
| C119 | 7 | 0.948 | 0.972 |
| C107 | 7 | 0.941 | 0.971 |
| C85 | 7 | 0.940 | 0.969 |
| C129 | 7 | 0.933 | 0.974 |
| C143 | 7 | 0.925 | 0.958 |
| C104 | 7 | 0.924 | 0.968 |
| C135 | 7 | 0.923 | 0.946 |
| C127 | 7 | 0.921 | 0.973 |
| C101 | 7 | 0.911 | 0.964 |
| M240 | 7 | 0.906 | 0.962 |
| C63 | 7 | 0.896 | 0.934 |
| C157 | 7 | 0.881 | 0.943 |
| C146 | 7 | 0.872 | 0.910 |
| C140 | 7 | 0.867 | 0.915 |
| F134 | 7 | 0.860 | 0.973 |
| E272 | 7 | 0.842 | 0.926 |
| C82 | 7 | 0.822 | 0.890 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
6 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA) | unfavorable | 8.58e-06 |
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 1.96e-05 |
| Pancreatic Adenocarcinoma (TCGA) | unfavorable | 0.000139 |
| Kidney Renal Clear Cell Carcinoma (TCGA) | unfavorable | 0.000284 |
| Kidney Renal Papillary Cell Carcinoma (TCGA) | unfavorable | 0.000388 |
| Glioblastoma Multiforme (validation) | unfavorable | 0.000697 |
Disease associations
OMIM: gene MIM:134637 | disease phenotypes: MIM:601859
GenCC curated gene-disease
2 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| autoimmune lymphoproliferative syndrome type 1 | Definitive | Autosomal dominant | 3 |
| autoimmune lymphoproliferative syndrome | Definitive | Autosomal dominant | 4 |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
1 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| FAS-related autoimmune lymphoproliferative immune disorder | Definitive | SD |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (7 panels, 7 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
7 panels:
| Panel | Rating |
|---|---|
| Autoimmune lymphoproliferative syndrome with defective apoptosis | green |
| COVID-19 research | green |
| Cytopenia - NOT Fanconi anaemia | green |
| Fetal anomalies | green |
| Haematological malignancies cancer susceptibility | green |
| Haematological malignancies for rare disease | green |
| Primary immunodeficiency or monogenic inflammatory bowel disease | green |
Mondo (2): autoimmune lymphoproliferative syndrome type 1 (MONDO:0011158), autoimmune lymphoproliferative syndrome (MONDO:0017979)
Orphanet (1): Autoimmune lymphoproliferative syndrome (Orphanet:3261)
HPO phenotypes
showing 60 of 187 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000031 | Epididymitis |
| HP:0000083 | Renal insufficiency |
| HP:0000099 | Glomerulonephritis |
| HP:0000155 | Oral ulcer |
| HP:0000360 | Tinnitus |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000488 | Retinopathy |
| HP:0000499 | Abnormal eyelash morphology |
| HP:0000501 | Glaucoma |
| HP:0000505 | Visual impairment |
| HP:0000518 | Cataract |
| HP:0000534 | Abnormal eyebrow morphology |
| HP:0000541 | Retinal detachment |
| HP:0000554 | Uveitis |
| HP:0000613 | Photophobia |
| HP:0000618 | Blindness |
| HP:0000622 | Blurred vision |
| HP:0000708 | Atypical behavior |
| HP:0000737 | Irritability |
| HP:0000854 | Thyroid adenoma |
| HP:0000978 | Bruising susceptibility |
| HP:0001025 | Urticaria |
| HP:0001045 | Vitiligo |
| HP:0001053 | Hypopigmented skin patches |
| HP:0001061 | Acne |
| HP:0001094 | Iridocyclitis |
| HP:0001097 | Keratoconjunctivitis sicca |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001269 | Hemiparesis |
| HP:0001287 | Meningitis |
| HP:0001288 | Gait disturbance |
| HP:0001289 | Confusion |
| HP:0001347 | Hyperreflexia |
| HP:0001369 | Arthritis |
| HP:0001402 | Hepatocellular carcinoma |
| HP:0001482 | Subcutaneous nodule |
| HP:0001596 | Alopecia |
| HP:0001637 | Abnormal myocardium morphology |
| HP:0001653 | Mitral regurgitation |
| HP:0001658 | Myocardial infarction |
| HP:0001659 | Aortic regurgitation |
| HP:0001701 | Pericarditis |
| HP:0001733 | Pancreatitis |
| HP:0001744 | Splenomegaly |
| HP:0001789 | Hydrops fetalis |
| HP:0001824 | Weight loss |
| HP:0001880 | Increased total eosinophil count |
| HP:0001888 | Decreased total lymphocyte count |
| HP:0001890 | Autoimmune hemolytic anemia |
| HP:0001891 | Iron deficiency anemia |
| HP:0001892 | Abnormal bleeding |
| HP:0001904 | Autoimmune neutropenia |
| HP:0001923 | Reticulocytosis |
| HP:0001945 | Fever |
| HP:0001954 | Recurrent fever |
| HP:0001971 | Hypersplenism |
| HP:0001973 | Autoimmune thrombocytopenia |
| HP:0002014 | Diarrhea |
GWAS associations
21 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST009731_7 | Blood protein levels in cardiovascular risk | 2e-28 |
| GCST006585_2533 | Blood protein levels | 2e-24 |
| GCST006585_2704 | Blood protein levels | 3e-21 |
| GCST006585_2276 | Blood protein levels | 4e-18 |
| GCST004146_14 | Chronic lymphocytic leukemia | 1e-15 |
| GCST002073_3 | Chronic lymphocytic leukemia | 1e-14 |
| GCST003468_11 | Chronic lymphocytic leukemia | 9e-14 |
| GCST90002403_408 | Red blood cell count | 4e-13 |
| GCST90002397_724 | Mean spheric corpuscular volume | 1e-12 |
| GCST90002392_694 | Mean corpuscular volume | 4e-12 |
| GCST002299_13 | Chronic lymphocytic leukemia | 2e-8 |
| GCST005528_16 | Juvenile idiopathic arthritis (oligoarticular or rheumatoid factor-negative polyarticular) | 3e-8 |
| GCST003814_2 | Selective IgA deficiency | 7e-8 |
| GCST000852_5 | Atrioventricular conduction | 7e-7 |
| GCST004863_8 | Mosquito bite size | 2e-6 |
| GCST001762_359 | Obesity-related traits | 5e-6 |
| GCST007844_16 | Ankylosing spondylitis | 5e-6 |
| GCST000763_3 | Immunoglobulin A | 6e-6 |
| GCST001762_183 | Obesity-related traits | 7e-6 |
| GCST001762_585 | Obesity-related traits | 7e-6 |
| GCST001762_517 | Obesity-related traits | 9e-6 |
EFO canonical traits (from GWAS)
6 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0004747 | protein measurement |
| EFO:0004338 | body weight |
| EFO:0004340 | body mass index |
| EFO:0008378 | mosquito bite reaction size measurement |
| EFO:0010610 | tumor necrosis factor receptor superfamily member 6 measurement |
| EFO:0004305 | erythrocyte count |
MeSH disease descriptors
1 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D056735 | Autoimmune Lymphoproliferative Syndrome | C15.604.515.138; C16.320.089; C20.111.288; C20.683.515.124 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4523207 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — Tumour necrosis factor (TNF) receptor family
CTD chemical–gene interactions
394 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Fluorouracil | increases expression, increases reaction, affects cotreatment, decreases expression, affects reaction (+1 more) | 21 |
| Doxorubicin | increases response to substance, decreases reaction, affects expression, affects cotreatment, increases activity (+5 more) | 17 |
| Arsenic Trioxide | decreases reaction, increases expression, affects cotreatment, affects reaction, increases cleavage (+1 more) | 16 |
| Cisplatin | increases expression, affects localization, increases stability, decreases reaction, affects expression (+6 more) | 15 |
| Benzo(a)pyrene | affects cotreatment, increases expression, decreases expression, decreases methylation, decreases reaction (+1 more) | 13 |
| Tretinoin | decreases reaction, increases activity, affects cotreatment, increases expression, decreases expression | 9 |
| Resveratrol | affects cotreatment, increases expression, increases reaction, increases localization, increases response to substance (+3 more) | 8 |
| Aflatoxin B1 | affects expression, decreases methylation, increases expression | 7 |
| bisphenol A | decreases expression, increases expression, affects cotreatment | 6 |
| sodium arsenite | decreases expression, increases expression | 6 |
| Vorinostat | affects cotreatment, increases expression, affects binding, increases reaction, increases phosphorylation (+4 more) | 6 |
| Acetylcysteine | decreases expression, decreases reaction, increases expression, affects binding | 6 |
| Valproic Acid | increases expression, affects expression, decreases expression, affects cotreatment | 6 |
| Palmitic Acid | affects cotreatment, affects expression, decreases expression, decreases reaction, increases expression | 6 |
| Methotrexate | decreases reaction, increases expression, decreases expression | 5 |
| Quercetin | affects response to substance, increases expression | 5 |
| Particulate Matter | decreases expression, increases abundance, affects expression, increases expression | 5 |
| methylmercuric chloride | increases expression, affects cotreatment | 4 |
| trichostatin A | increases expression, increases reaction, affects cotreatment | 4 |
| 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one | increases reaction, decreases expression, affects response to substance, decreases reaction, increases expression | 4 |
| Arsenic | affects methylation, increases expression, affects cotreatment, affects expression | 4 |
| Camptothecin | increases expression, affects cotreatment, decreases expression, increases activity, increases cleavage (+2 more) | 4 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression, increases expression | 4 |
| Mitomycin | affects splicing, increases expression, increases secretion | 4 |
| Cadmium Chloride | increases expression, decreases expression | 4 |
| Oleic Acid | affects cotreatment, decreases reaction, increases expression | 4 |
| monomethylarsonous acid | decreases expression, increases expression | 3 |
| Bortezomib | affects cotreatment, increases expression, decreases expression | 3 |
| Zoledronic Acid | affects cotreatment, increases expression | 3 |
| Acetaminophen | decreases expression, increases expression | 3 |
ChEMBL screening assays
8 unique, capped per target: 8 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4434525 | Binding | Inhibition of s-CD95L(unknown origin)-stimulated cell migration of human MDA-MB-231 cells at 1 uM incubated for 24 hrs by Boyden chambers assay | Synthesis of peptidomimetics and chemo-biological tools for CD95/PLCγ1 interaction analysis. — *Bioorg Med Chem Lett* |
Cellosaurus cell lines
9 cell lines: 7 cancer cell line, 2 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A2CL | RSO4 | Cancer cell line | Female |
| CVCL_B1RY | Abcam HeLa FAS KO | Cancer cell line | Female |
| CVCL_B8FT | Abcam HCT 116 FAS KO | Cancer cell line | Male |
| CVCL_B8VM | Abcam MCF-7 FAS KO | Cancer cell line | Female |
| CVCL_B9I0 | Abcam A-549 FAS KO | Cancer cell line | Male |
| CVCL_D9EP | Ubigene HEK293 FAS KO | Transformed cell line | Female |
| CVCL_SN13 | HAP1 FAS (-) | Cancer cell line | Male |
| CVCL_T422 | Psi-CRIP-RxhFAS-i-CD80 | Transformed cell line | Male |
| CVCL_VN49 | KOB | Cancer cell line | Male |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 93 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01574313 | Phase 4 | COMPLETED | Effect of Stellate Ganglion Block on Meniere’s Disease |
| NCT02529475 | Phase 4 | TERMINATED | Evaluation of Inner Ear and Brain Structures With Contrast-enhanced MRI in Healthy Subjects (HYDROPS) |
| NCT04815187 | Phase 4 | ACTIVE_NOT_RECRUITING | Repurposed Use of Allergic Rhinitis and Allergic Asthma Drug to Reduce Vertigo and Hearing Loss in Meniere’s Disease |
| NCT02933333 | Phase 4 | UNKNOWN | G-CSF Alone or Combination With GM-CSF on Prevention and Treatment of Infection in Children With Malignant Tumor |
| NCT03664674 | Phase 3 | COMPLETED | Phase 3 Study of OTO-104 in Subjects With Unilateral Meniere’s Disease |
| NCT04677972 | Phase 3 | COMPLETED | SPI-1005 for the Treatment of Meniere’s Disease |
| NCT05851508 | Phase 3 | RECRUITING | The Effecttiveness of Intratympanic Methylprednisolon Injections Compared to Placebo in the Treatment of Vertigo Attacks in Meniere’s Disease |
| NCT03017326 | Phase 3 | ACTIVE_NOT_RECRUITING | Paediatric Hepatic International Tumour Trial |
| NCT03533582 | Phase 3 | ACTIVE_NOT_RECRUITING | Cisplatin and Combination Chemotherapy in Treating Children and Young Adults With Hepatoblastoma or Liver Cancer After Surgery |
| NCT04478292 | Phase 3 | RECRUITING | A Multi-institutional Study for Treatment of Children With Newly Diagnosed Hepatoblastoma Using a Modified PHITT Strategy |
| NCT01821781 | Phase 2 | ACTIVE_NOT_RECRUITING | Immune Disorder HSCT Protocol |
| NCT06730126 | Phase 2 | RECRUITING | Study of the ITK Inhibitor Soquelitinib to Reduce Lymphoproliferation and Improve Cytopenias in Autoimmune Lymphoproliferative Syndrome (ALPS)-FAS Patients |
| NCT05420350 | Phase 2 | UNKNOWN | Lamotrigine and Bupropion for Meniere’s Disease |
| NCT06544434 | Phase 2 | UNKNOWN | Laser Acupuncture for Meniere Disease |
| NCT01154816 | Phase 2 | COMPLETED | Alisertib in Treating Young Patients With Recurrent or Refractory Solid Tumors or Leukemia |
| NCT02011126 | Phase 2 | WITHDRAWN | Imetelstat Sodium in Treating Younger Patients With Relapsed or Refractory Solid Tumors |
| NCT02867592 | Phase 2 | ACTIVE_NOT_RECRUITING | Cabozantinib-S-Malate in Treating Younger Patients With Recurrent, Refractory, or Newly Diagnosed Sarcomas, Wilms Tumor, or Other Rare Tumors |
| NCT03155620 | Phase 2 | ACTIVE_NOT_RECRUITING | Targeted Therapy Directed by Genetic Testing in Treating Pediatric Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphomas, or Histiocytic Disorders (The Pediatric MATCH Screening Trial) |
| NCT03210714 | Phase 2 | ACTIVE_NOT_RECRUITING | Erdafitinib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With FGFR Mutations (A Pediatric MATCH Treatment Trial) |
| NCT03213652 | Phase 2 | ACTIVE_NOT_RECRUITING | Ensartinib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With ALK or ROS1 Genomic Alterations (A Pediatric MATCH Treatment Trial) |
| NCT03213665 | Phase 2 | COMPLETED | Tazemetostat in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With EZH2, SMARCB1, or SMARCA4 Gene Mutations (A Pediatric MATCH Treatment Trial) |
| NCT03213678 | Phase 2 | COMPLETED | Samotolisib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With TSC or PI3K/MTOR Mutations (A Pediatric MATCH Treatment Trial) |
| NCT03213704 | Phase 2 | ACTIVE_NOT_RECRUITING | Larotrectinib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With NTRK Fusions (A Pediatric MATCH Treatment Trial) |
| NCT03220035 | Phase 2 | COMPLETED | Vemurafenib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With BRAF V600 Mutations (A Pediatric MATCH Treatment Trial) |
| NCT03233204 | Phase 2 | COMPLETED | Olaparib in Treating Patients With Relapsed or Refractory Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With Defects in DNA Damage Repair Genes (A Pediatric MATCH Treatment Trial) |
| NCT03526250 | Phase 2 | COMPLETED | Palbociclib in Treating Patients With Relapsed or Refractory Rb Positive Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With Activating Alterations in Cell Cycle Genes (A Pediatric MATCH Treatment Trial) |
| NCT03698994 | Phase 2 | ACTIVE_NOT_RECRUITING | Ulixertinib in Treating Patients With Advanced Solid Tumors, Non-Hodgkin Lymphoma, or Histiocytic Disorders With MAPK Pathway Mutations (A Pediatric MATCH Treatment Trial) |
| NCT04195555 | Phase 2 | ACTIVE_NOT_RECRUITING | Ivosidenib in Treating Patients With Advanced Solid Tumors, Lymphoma, or Histiocytic Disorders With IDH1 Mutations (A Pediatric MATCH Treatment Trial) |
| NCT04284774 | Phase 2 | ACTIVE_NOT_RECRUITING | Tipifarnib for the Treatment of Advanced Solid Tumors, Lymphoma, or Histiocytic Disorders With HRAS Gene Alterations, a Pediatric MATCH Treatment Trial |
| NCT04320888 | Phase 2 | ACTIVE_NOT_RECRUITING | Selpercatinib for the Treatment of Advanced Solid Tumors, Lymphomas, or Histiocytic Disorders With Activating RET Gene Alterations, a Pediatric MATCH Treatment Trial |
| NCT05302921 | Phase 2 | COMPLETED | Neoadjuvant Dual Checkpoint Inhibition and Cryoablation in Relapsed/Refractory Pediatric Solid Tumors |
| NCT06638931 | Phase 2 | RECRUITING | Agnostic Therapy in Rare Solid Tumors |
| NCT07300449 | Phase 2 | RECRUITING | A Prospective Multicenter Clinical Study of SCCG Protocol and ctDNA 5hmc in Predicting the Chemotherapy Sensitivity and Monitoring the Recurrence and Metastasis of Hepatoblastoma in Children and Adolescents |
| NCT04674735 | Phase 1 | WITHDRAWN | Safety of APSLXR in Patients Presenting Vertigo of Vestibular Origin or Meniere’s Disease |
| NCT01331135 | Phase 1 | COMPLETED | Aflac ST0901 CHOANOME - Sirolimus in Solid Tumors |
| NCT02390843 | Phase 1 | COMPLETED | Simvastatin With Topotecan and Cyclophosphamide in Relapsed and/or Refractory Pediatric Solid and CNS Tumors |
| NCT03618381 | Phase 1 | ACTIVE_NOT_RECRUITING | EGFR806 CAR T Cell Immunotherapy for Recurrent/Refractory Solid Tumors in Children and Young Adults |
| NCT04093648 | Phase 1 | WITHDRAWN | T Cells co- Expressing a Second Generation Glypican 3-specific Chimeric Antigen Receptor With Cytokines Interleukin-21 and 15 as Immunotherapy for Patients With Liver Cancer (TEGAR) |
| NCT04308330 | Phase 1 | RECRUITING | Vorinostat in Combination With Chemotherapy in Relapsed/Refractory Solid Tumors and CNS Malignancies |
| NCT04337177 | Phase 1 | ACTIVE_NOT_RECRUITING | Flavored, Oral Irinotecan VAL-413 (Orotecan®) Given With Temozolomide for Treatment of Recurrent Pediatric Solid Tumors |
| NCT04483778 | Phase 1 | ACTIVE_NOT_RECRUITING | B7H3 CAR T Cell Immunotherapy for Recurrent/Refractory Solid Tumors in Children and Young Adults |
| NCT04897321 | Phase 1 | RECRUITING | B7-H3-Specific Chimeric Antigen Receptor Autologous T-Cell Therapy for Pediatric Patients With Solid Tumors (3CAR) |
| NCT06198296 | Phase 1 | RECRUITING | Immunotherapy For Adults With GPC3-Positive Solid Tumors Using IL-15 and IL-21 Armored GPC3-CAR T Cells |
| NCT07148050 | Phase 1 | RECRUITING | Immunotherapy for Solid Tumor Malignancies in Pediatrics Using Interleukin-15 and -21 Armored Glypican-3-specific Chimeric Antigen Receptor T Cells |
| NCT00392951 | Phase 1/2 | COMPLETED | Sirolimus for Autoimmune Disease of Blood Cells |
| NCT00605657 | Phase 1/2 | COMPLETED | Valproic Acid (Depakote[Registered Trademark]) to Treat Autoimmune Lymphoproliferative Syndrome (ALPS) |
| NCT01672918 | Not specified | WITHDRAWN | Fluorodeoxyglucose Imaging Studies to Detect Lymphoma |
| NCT04902807 | Not specified | COMPLETED | Conception of a Diagnosis, Prognosis and Therapeutic Decision Tool for Patients With Autoimmunity and Inflammation |
| NCT04218123 | Phase 2/3 | COMPLETED | Assessing the Efficacy of a Serotonin and Norepinephrine Reuptake Inhibitor for Improving Meniere’s Disease Outcomes |
| NCT04766853 | Phase 1/2 | COMPLETED | Verification of the Efficacy/safety of the Intratympanic Drug Delivery for Hearing Loss |
| NCT04794842 | Early Phase 1 | UNKNOWN | Comparing Topical Tetracaine Drops to Topical Focal Phenol for Local Anesthesia During Intratympanic Steroid Injection |
| NCT00599560 | Not specified | COMPLETED | Vasopressin and V2 Receptor in Meniere’s Disease |
| NCT02371798 | Not specified | WITHDRAWN | Unilateral Meniere Disease: Can Double Dose Gadolinium and Delayed Imaging Make the Diagnosis? |
| NCT03520322 | Not specified | TERMINATED | A Study of a Mastoid Device in Subjects With Ménière’s Disease |
| NCT03795675 | Not specified | ACTIVE_NOT_RECRUITING | CI Following VS Removal or Labyrinthectomy |
| NCT04370366 | Not specified | UNKNOWN | Imaging of Endolymphatic Hydrops at 7T MRI |
| NCT04569175 | Not specified | COMPLETED | Non Enhanced Labyrinth Imaging for the Detection of Endolymphatic Hydrops in Meniere’s Disease NELI Study |
| NCT04686695 | Not specified | COMPLETED | Transcutaneous Auricular Vagus Nerve Stimulation Treatment on Meniere Disease |
| NCT04835688 | Not specified | UNKNOWN | Ventilation Tube Insertion for Unilateral Menière’s Disease |
| NCT04902963 | Not specified | COMPLETED | What is the Tympanic Membrane Healing Time After Insertion of a Gelfoam PE Tube? |
Related Atlas pages
- Associated diseases: autoimmune lymphoproliferative syndrome type 1, autoimmune lymphoproliferative syndrome
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): ankylosing spondylitis, aortic aneurysm, familial thoracic 6, autoimmune lymphoproliferative syndrome, autoimmune lymphoproliferative syndrome type 1, B-cell chronic lymphocytic leukemia, hepatoblastoma, Meniere disease, oligoarticular juvenile idiopathic arthritis, rheumatoid factor-negative juvenile idiopathic arthritis, selective IgA deficiency disease, systemic-onset juvenile idiopathic arthritis