FBXO11
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Also known as FBX11UBR6
Summary
FBXO11 (F-box protein 11, HGNC:13590) is a protein-coding gene on chromosome 2p16.3, encoding F-box only protein 11 (Q86XK2). Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as DTL/CDT2, BCL6, SNAI1 and PRDM1/BLIMP1. It is a selective cancer dependency (DepMap: 15.3% of cell lines).
This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbxs class. It can function as an arginine methyltransferase that symmetrically dimethylates arginine residues, and it acts as an adaptor protein to mediate the neddylation of p53, which leads to the suppression of p53 function. This gene is known to be down-regulated in melanocytes from patients with vitiligo, a skin disorder that results in depigmentation. Polymorphisms in this gene are associated with chronic otitis media with effusion and recurrent otitis media (COME/ROM), a hearing loss disorder, and the knockout of the homologous mouse gene results in the deaf mouse mutant Jeff (Jf), a single gene model of otitis media. Alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene.
Source: NCBI Gene 80204 — RefSeq curated summary.
At a glance
- Gene–disease (curated): intellectual developmental disorder with dysmorphic facies and behavioral abnormalities (Definitive, GenCC)
- GWAS associations: 15
- Clinical variants (ClinVar): 1,240 total — 54 pathogenic, 93 likely-pathogenic
- Phenotypes (HPO): 123
- Druggable target: yes
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 3 cancer types
- Cancer dependency (DepMap): dependent in 15.3% of screened cell lines
- MANE Select transcript:
NM_001190274
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:13590 |
| Approved symbol | FBXO11 |
| Name | F-box protein 11 |
| Location | 2p16.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FBX11, UBR6 |
| Ensembl gene | ENSG00000138081 |
| Ensembl biotype | protein_coding |
| OMIM | 607871 |
| Entrez | 80204 |
Gene structure
Transcript identifiers
Ensembl transcripts: 21 — 9 protein_coding, 8 retained_intron, 3 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000402508, ENST00000403359, ENST00000405808, ENST00000424163, ENST00000434234, ENST00000465204, ENST00000470899, ENST00000480038, ENST00000492225, ENST00000493962, ENST00000681999, ENST00000682451, ENST00000682484, ENST00000682975, ENST00000683894, ENST00000684085, ENST00000684523, ENST00000684712, ENST00000895446, ENST00000945015, ENST00000945016
RefSeq mRNA: 3 — MANE Select: NM_001190274
NM_001190274, NM_001374325, NM_025133
CCDS: CCDS1837, CCDS54357
Canonical transcript exons
ENST00000403359 — 23 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001519522 | 47905489 | 47906498 |
| ENSE00001643908 | 47813791 | 47813867 |
| ENSE00001789594 | 47818779 | 47818864 |
| ENSE00003497186 | 47834788 | 47834871 |
| ENSE00003508984 | 47809158 | 47809266 |
| ENSE00003527374 | 47813234 | 47813377 |
| ENSE00003529687 | 47839419 | 47839500 |
| ENSE00003529914 | 47808329 | 47808427 |
| ENSE00003536108 | 47822218 | 47822303 |
| ENSE00003543404 | 47832572 | 47832678 |
| ENSE00003552484 | 47810316 | 47810426 |
| ENSE00003553750 | 47839642 | 47839769 |
| ENSE00003561320 | 47834579 | 47834711 |
| ENSE00003563258 | 47832964 | 47833070 |
| ENSE00003580296 | 47832769 | 47832880 |
| ENSE00003587526 | 47818956 | 47819078 |
| ENSE00003603665 | 47838859 | 47839003 |
| ENSE00003638566 | 47820362 | 47820456 |
| ENSE00003642472 | 47823143 | 47823360 |
| ENSE00003646394 | 47832349 | 47832486 |
| ENSE00003647540 | 47835872 | 47836001 |
| ENSE00003666349 | 47809600 | 47809707 |
| ENSE00003902479 | 47806920 | 47808247 |
Expression profiles
Bgee: expression breadth ubiquitous, 287 present calls, max score 97.92.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 32.7701 / max 300.8850, expressed in 1814 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 28241 | 13.6300 | 1757 |
| 28240 | 8.1751 | 1735 |
| 28239 | 7.6880 | 1747 |
| 28236 | 1.7034 | 876 |
| 28237 | 1.3595 | 690 |
| 28238 | 0.2141 | 119 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cortical plate | UBERON:0005343 | 97.92 | gold quality |
| ganglionic eminence | UBERON:0004023 | 97.19 | gold quality |
| ventricular zone | UBERON:0003053 | 96.48 | gold quality |
| cerebellar cortex | UBERON:0002129 | 96.12 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 96.12 | gold quality |
| cerebellum | UBERON:0002037 | 95.99 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 95.98 | gold quality |
| calcaneal tendon | UBERON:0003701 | 95.96 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 95.82 | gold quality |
| superficial temporal artery | UBERON:0001614 | 95.00 | gold quality |
| ovary | UBERON:0000992 | 94.81 | gold quality |
| left ovary | UBERON:0002119 | 94.77 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 94.74 | gold quality |
| monocyte | CL:0000576 | 94.60 | gold quality |
| mononuclear cell | CL:0000842 | 94.54 | gold quality |
| corpus callosum | UBERON:0002336 | 94.53 | gold quality |
| endometrium | UBERON:0001295 | 94.41 | gold quality |
| leukocyte | CL:0000738 | 94.39 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 94.38 | gold quality |
| right ovary | UBERON:0002118 | 94.38 | gold quality |
| primary visual cortex | UBERON:0002436 | 94.21 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 94.15 | gold quality |
| tendon | UBERON:0000043 | 94.03 | gold quality |
| embryo | UBERON:0000922 | 93.94 | gold quality |
| body of uterus | UBERON:0009853 | 93.93 | gold quality |
| right lung | UBERON:0002167 | 93.92 | gold quality |
| occipital lobe | UBERON:0002021 | 93.91 | gold quality |
| prefrontal cortex | UBERON:0000451 | 93.87 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 93.81 | gold quality |
| right testis | UBERON:0004534 | 93.66 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.64 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): GATA3
miRNA regulators (miRDB)
168 targeting FBXO11, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-3064-3P | 100.00 | 70.09 | 1254 |
| HSA-MIR-4682 | 100.00 | 68.89 | 1258 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-12121 | 99.99 | 66.64 | 255 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-8068 | 99.98 | 73.85 | 2376 |
| HSA-MIR-4715-3P | 99.98 | 66.03 | 670 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-9-3P | 99.96 | 70.88 | 2068 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-3912-5P | 99.95 | 66.11 | 925 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 15.3% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 34)
- A type II protein arginine methyltransferase that forms asymmetric dimethylarginine modifications in proteins. (PMID:16487488)
- The FBXO11 gene is the human homologue of the gene mutated in the novel deaf mouse mutant jeff (Jf), a single gene model of otitis media. FBXO11 gene for association with chronic otitis media with effusion. (PMID:16847180)
- FBXO11 promotes the Neddylation (NEDD8) of p53 and inhibits its transcriptional activity (PMID:17098746)
- Results support the notion that FBXO11 plays an important role in regulating proliferation and apoptosis of melanocytes, and functional export of tyrosinase from ER in vitiligo melanocytes. (PMID:20514423)
- FBXO11 has a lower expression in skin lesion tissues than in normal tissues from vitiligo patients. (PMID:20646433)
- these data provide strong evidence for FBXO11 as a susceptibility gene for severe OM. (PMID:21293382)
- A molecular mechanism controlling BCL6 stability–mutations and deletions in FBXO11 contribute to lymphomagenesis through BCL6 stabilization (PMID:22113614)
- The functional interaction between FBXO11 and CDT2 is evolutionary conserved from worms to humans and plays an important role in regulating the timing of cell-cycle exit. (PMID:23478441)
- Migration of epithelial cells is stimulated by CRL1(FBXO11)-mediated downregulation of Cdt2 and the consequent stabilization of Set8. (PMID:23478445)
- TGF-beta signaling promotes exit from the cell cycle and cellular migration through cullin cross-regulation: SCF-FBXO11 turns off CRL4-Cdt2. (PMID:23892434)
- study defined eight additional recurrently mutated genes in SMZL; these genes are CREBBP, CBFA2T3, AMOTL1, FAT4, FBXO11, PLA2G4D, TRRAP and USH2A. (PMID:24349473)
- The PKD1-FBXO11-SNAIL axis is a mechanism of posttranslational regulation of epithelial-mesenchymal transition and cancer metastasis. (PMID:25203322)
- Our results identify FBXO11 as a novel miR-21 target gene, and demonstrate that the oncogenic miRNA miR-21 decreases the expression of FBXO11, which normally acts as a tumor suppressor, and thereby promotes tumorigenesis. (PMID:25589783)
- FBXO11 is a direct target of miR-621 in breast cancer cells. (PMID:25867061)
- UBR3/6 regulate cardiomyocyte Nav 1.5 channel protein levels via the ubiquitin-proteasome pathway. (PMID:26059563)
- siRNA-mediated knockdown of FBXO11 facilitated HIF-1alpha expression in various cancer cells and HIF-1alpha-driven gene expressions, but the FBXO10 knockdown did not. (PMID:26187670)
- Chronic otitis media is associated with the TGIF1 and FBXO11 loci that are involved in TGF-beta signaling, suggesting this pathway may be important in the transition from acute to chronic middle ear inflammation, and a potential molecular target. (PMID:28970529)
- Understanding of the functions of FBXO11. (PMID:29278851)
- High expression of FBXO11 predicted a poor survival of hepatocellular carcinoma patients. (PMID:29518611)
- we confirm deleterious de novo mutations in FBXO11 as a cause of Intellectual disability and start the delineation of the associated clinical picture which may also comprise postnatal microcephaly or borderline small head size and behavioural anomalies. (PMID:29796876)
- Eight missense variants distributed throughout FBXO11. (PMID:30057029)
- 24 individuals with a de novo disease-causing variant in, or partial deletion of, the F-box only protein 11 gene, are reported. (PMID:30679813)
- FBXO11 expression was closely related to renal cell carcinoma malignancy and poor prognosis, indicating its potential as a prognostic marker as well as a therapeutic target for renal cell carcinoma. (PMID:31159774)
- Long non-coding RNA NNT-AS1 regulates proliferation, apoptosis, inflammation and airway remodeling of chronic obstructive pulmonary disease via targeting miR-582-5p/FBXO11 axis. (PMID:32768929)
- The first familial case of inherited intellectual developmental disorder with dysmorphic facies and behavioral abnormalities (IDDFBA) with a novel FBXO11 variant. (PMID:32902151)
- FBXO11 is a candidate tumor suppressor in the leukemic transformation of myelodysplastic syndrome. (PMID:33024076)
- FBXO11-mediated proteolysis of BAHD1 relieves PRC2-dependent transcriptional repression in erythropoiesis. (PMID:33156908)
- De novo missense variants in FBXO11 alter its protein expression and subcellular localization. (PMID:34505148)
- Frequent mutations of FBXO11 highlight BCL6 as a therapeutic target in Burkitt lymphoma. (PMID:34625792)
- Ultrasound-targeted microbubble destruction-mediated silencing of FBXO11 suppresses development of pancreatic cancer. (PMID:35437704)
- FBXO11 amplifies type I interferon signaling to exert antiviral effects by facilitating the assemble of TRAF3-TBK1-IRF3 complex. (PMID:36897010)
- FBXO11 governs macrophage cell death and inflammation in response to bacterial toxins. (PMID:36977592)
- FBXO11 constitutes a major negative regulator of MHC class II through ubiquitin-dependent proteasomal degradation of CIITA. (PMID:37279268)
- FBXO11 variants are associated with intellectual disability and variable clinical manifestation in Chinese affected individuals. (PMID:38740982)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Fbxo11 | ENSMUSG00000005371 |
| rattus_norvegicus | Fbxo11 | ENSRNOG00000016396 |
| drosophila_melanogaster | FBXO11 | FBGN0037760 |
| caenorhabditis_elegans | WBGENE00001089 | |
| caenorhabditis_elegans | WBGENE00015268 |
Paralogs (1): FBXO10 (ENSG00000147912)
Protein
Protein identifiers
F-box only protein 11 — Q86XK2 (reviewed: Q86XK2)
Alternative names: Protein arginine N-methyltransferase 9, Vitiligo-associated protein 1
All UniProt accessions (6): Q86XK2, A0A804HK63, B5MCV6, C9IYF0, E7EP88, H0YAV3
UniProt curated annotations — full annotation on UniProt →
Function. Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as DTL/CDT2, BCL6, SNAI1 and PRDM1/BLIMP1. The SCF(FBXO11) complex mediates ubiquitination and degradation of BCL6, thereby playing a role in the germinal center B-cells terminal differentiation toward memory B-cells and plasma cells. The SCF(FBXO11) complex also mediates ubiquitination and degradation of DTL, an important step for the regulation of TGF-beta signaling, cell migration and the timing of the cell-cycle progression and exit. The SCF(FBXO11) complex also catalyzes ubiquitination and degradation of GSK3B-phosphorylated SNAI1. Binds to and neddylates phosphorylated p53/TP53, inhibiting its transcriptional activity. Plays a role in the regulatiom of erythropoiesis but not myelopoiesis or megakaryopoiesis. Mechanistically, activates erythroid genes by mediating the degradation of BAHD1, a heterochromatin-associated protein that recruits corepressors to H3K27me3 marks. Participates in macrophage cell death and inflammation in response to bacterial toxins by regulating the expression of complement 5a receptor 1/C5AR1 and IL-1beta. Acts as a critical regulator to determine the level of MHC-II by mediating the recognition of degron at the P/S/T domain of CIITA leading to its ubiquitination and subsequent degradation via the proteasome. Participates in the antiviral repsonse by initiating the activation of TBK1-IRF3-IFN-I axis. Mediates the ‘Lys-63’-linked ubiquitination of TRAF3 to strengthen the interaction between TRAF3 and TBK1.
Subunit / interactions. Component of the SCF(FBXO11) complex consisting of CUL1, RBX1, SKP1 and FBXO11. Interacts with CIITA.
Subcellular location. Nucleus. Chromosome.
Tissue specificity. Isoform 5 is expressed in keratinocytes, fibroblasts and melanocytes.
Disease relevance. Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities (IDDFBA) [MIM:618089] An autosomal dominant developmental disorder with variable manifestations and onset in infancy or first years of life. Clinical features include intellectual disability, speech delay, hyperkinetic disorder, hyperactivity, seizures, pre- and postnatal growth retardation, microcephaly, and facial dysmorphism. The disease is caused by variants affecting the gene represented in this entry. Defects in FBXO11 may be a cause of diffuse large B-cell lymphoma by allowing the accumulation of BCL6, an oncoprotein that has a critical role in lymphomas.
Pathway. Protein modification; protein ubiquitination.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q86XK2-1 | 1 | yes |
| Q86XK2-2 | 2 | |
| Q86XK2-6 | 6 | |
| Q86XK2-3 | 3 | |
| Q86XK2-4 | 4 | |
| Q86XK2-5 | 5 |
RefSeq proteins (3): NP_001177203, NP_001361254, NP_079409 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001810 | F-box_dom | Domain |
| IPR003126 | Znf_UBR | Domain |
| IPR006626 | PbH1 | Repeat |
| IPR006633 | Carb-bd_sugar_hydrolysis-dom | Domain |
| IPR011050 | Pectin_lyase_fold/virulence | Homologous_superfamily |
| IPR012334 | Pectin_lyas_fold | Homologous_superfamily |
| IPR022441 | Para_beta_helix_rpt-2 | Repeat |
| IPR036047 | F-box-like_dom_sf | Homologous_superfamily |
| IPR039448 | Beta_helix | Domain |
| IPR047504 | FBXO11_UBR-box | Domain |
| IPR047505 | F-box_FBXO11 | Domain |
| IPR051550 | SCF-Subunits/Alg-Epimerases | Family |
Pfam: PF02207, PF12937, PF13229
UniProt features (65 total): repeat 19, sequence variant 19, splice variant 8, compositionally biased region 4, sequence conflict 4, strand 3, helix 2, chain 1, domain 1, zinc finger region 1, region of interest 1, mutagenesis site 1, turn 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5VMD | X-RAY DIFFRACTION | 2.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q86XK2-F1 | 82.65 | 0.69 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 575 | greatly reduced ability to bind prdm1 and reduced proteolysis of prdm1. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-8951664 | Neddylation |
| R-HSA-983168 | Antigen processing: Ubiquitination & Proteasome degradation |
MSigDB gene sets: 528 (showing top):
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, MODULE_255, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION, GOBP_SENSORY_PERCEPTION_OF_MECHANICAL_STIMULUS, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, MODULE_317, ATGCAGT_MIR217, GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_TO_MESENCHYMAL_TRANSITION, FOXD3_01, HERNANDEZ_ABERRANT_MITOSIS_BY_DOCETACEL_2NM_DN, RODRIGUES_NTN1_TARGETS_UP, CTAGGAA_MIR384, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP
GO Biological Process (7): ubiquitin-dependent protein catabolic process (GO:0006511), sensory perception of sound (GO:0007605), negative regulation of epithelial to mesenchymal transition (GO:0010719), protein ubiquitination (GO:0016567), regulation of apoptotic process (GO:0042981), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), epithelial to mesenchymal transition (GO:0001837)
GO Molecular Function (6): ubiquitin-protein transferase activity (GO:0004842), zinc ion binding (GO:0008270), protein-arginine N-methyltransferase activity (GO:0016274), ubiquitin-like ligase-substrate adaptor activity (GO:1990756), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (7): ubiquitin ligase complex (GO:0000151), nucleus (GO:0005634), nucleoplasm (GO:0005654), chromosome (GO:0005694), nucleolus (GO:0005730), cytoplasm (GO:0005737), cytosol (GO:0005829)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Post-translational protein modification | 1 |
| Class I MHC mediated antigen processing & presentation | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| nuclear lumen | 2 |
| intracellular membraneless organelle | 2 |
| protein ubiquitination | 1 |
| modification-dependent protein catabolic process | 1 |
| sensory perception of mechanical stimulus | 1 |
| epithelial to mesenchymal transition | 1 |
| regulation of epithelial to mesenchymal transition | 1 |
| negative regulation of cell differentiation | 1 |
| negative regulation of multicellular organismal process | 1 |
| protein modification by small protein conjugation | 1 |
| apoptotic process | 1 |
| regulation of programmed cell death | 1 |
| ubiquitin-dependent protein catabolic process | 1 |
| proteasomal protein catabolic process | 1 |
| mesenchymal cell differentiation | 1 |
| ubiquitin-like protein transferase activity | 1 |
| transition metal ion binding | 1 |
| protein methyltransferase activity | 1 |
| arginine N-methyltransferase activity | 1 |
| enzyme-substrate adaptor activity | 1 |
| binding | 1 |
| cation binding | 1 |
| intracellular protein-containing complex | 1 |
| transferase complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
Protein interactions and networks
STRING
1606 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FBXO11 | SKP1 | P34991 | 857 |
| FBXO11 | CUL1 | Q13616 | 827 |
| FBXO11 | MSH6 | P52701 | 788 |
| FBXO11 | FBXL14 | Q8N1E6 | 773 |
| FBXO11 | DTL | Q9NZJ0 | 726 |
| FBXO11 | CUL2 | Q13617 | 650 |
| FBXO11 | FBXO45 | P0C2W1 | 647 |
| FBXO11 | FBXL5 | Q9UKA1 | 605 |
| FBXO11 | PRKD1 | Q15139 | 589 |
| FBXO11 | FBXO4 | Q9UKT5 | 586 |
| FBXO11 | TP53 | P04637 | 581 |
| FBXO11 | FBXO9 | Q9UK97 | 572 |
| FBXO11 | GSK3B | P49841 | 556 |
| FBXO11 | UBR3 | Q6ZT12 | 554 |
| FBXO11 | UBR7 | Q8N806 | 529 |
IntAct
159 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FBXO11 | SKP1 | psi-mi:“MI:0915”(physical association) | 0.930 |
| SKP1 | FBXO11 | psi-mi:“MI:0915”(physical association) | 0.930 |
| CDK13 | CCNK | psi-mi:“MI:0914”(association) | 0.830 |
| KHDRBS2 | KHDRBS3 | psi-mi:“MI:0914”(association) | 0.800 |
| CUL4B | COPS2 | psi-mi:“MI:0914”(association) | 0.790 |
| COPS6 | RHOBTB1 | psi-mi:“MI:0914”(association) | 0.730 |
| PRPF3 | PRPF4 | psi-mi:“MI:0914”(association) | 0.730 |
| CTBP1 | CBX4 | psi-mi:“MI:0914”(association) | 0.700 |
| SKP1 | FBXO11 | psi-mi:“MI:0915”(physical association) | 0.680 |
| FBXO11 | SKP1 | psi-mi:“MI:0915”(physical association) | 0.680 |
| FBXO11 | SKP1 | psi-mi:“MI:0914”(association) | 0.680 |
| TP53 | FBXO11 | psi-mi:“MI:0915”(physical association) | 0.650 |
| FBXO11 | TP53 | psi-mi:“MI:0407”(direct interaction) | 0.650 |
| FBXO11 | TP53 | psi-mi:“MI:0915”(physical association) | 0.650 |
| FBXO11 | TP53 | psi-mi:“MI:0567”(neddylation reaction) | 0.650 |
| BCL6 | FBXO11 | psi-mi:“MI:0407”(direct interaction) | 0.650 |
| BCL6 | FBXO11 | psi-mi:“MI:0915”(physical association) | 0.650 |
| FBXO11 | BCL6 | psi-mi:“MI:0914”(association) | 0.650 |
| FBXO11 | RBX1 | psi-mi:“MI:0914”(association) | 0.640 |
| SKP1 | MYCBP2 | psi-mi:“MI:0914”(association) | 0.640 |
BioGRID (235): FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-Western), FBXO11 (Two-hybrid), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS), FBXO11 (Affinity Capture-MS)
ESM2 similar proteins: A0A286ZK88, A1L1L6, A7MB28, A8WGF4, B8BJ39, D0G6S1, O00399, O54956, P11029, P11497, Q13085, Q148G7, Q28007, Q28943, Q28DR7, Q2HJF8, Q2RAK2, Q4R4U1, Q502J7, Q5FVD6, Q5R559, Q5R5F8, Q5R7D8, Q5R8Q7, Q5SWU9, Q5ZIT8, Q5ZM73, Q6AYR2, Q6NVC5, Q6NWV3, Q6P1X5, Q6PC62, Q7TPD1, Q7TSL3, Q86XK2, Q8BG51, Q8BH44, Q8C176, Q8CHR6, Q8IWZ6
Diamond homologs: A2AN08, O95071, P51592, Q29L39, Q2TL32, Q5T4S7, Q62671, Q7TPD1, Q7TSL3, Q80TP3, Q86XK2, Q94251, Q9VLT5, A2VE78, C0HAC0, Q2YDQ5, Q3T0J1, Q58DG6, Q5R6E1, Q5XGI3, Q6INS1, Q8C2S5, Q8IX29, Q96IG2, Q9CZV8, Q9QZH7, Q9QZM9, Q9UKA1, B9G2A8, Q9LG11, Q9SRU2, A1L271, C4JPW9, C5GVJ9, C5JD40, D4AM37, D4D8P3, O08653, O14775, P0CS44
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| FBXO11 | down-regulates | TP53 | neddylation |
| FBXO11 | down-regulates | BCL6 | binding |
| FBXO11 | down-regulates | DTL | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 187 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| DNA Damage Recognition in GG-NER | 8 | 18.1× | 9e-06 |
| Recognition of DNA damage by PCNA-containing replication complex | 5 | 15.1× | 1e-03 |
| FBXL7 down-regulates AURKA during mitotic entry and in early mitosis | 7 | 13.8× | 9e-05 |
| Formation of TC-NER Pre-Incision Complex | 8 | 13.4× | 3e-05 |
| GSK3B-mediated proteasomal degradation of PD-L1(CD274) | 7 | 13.2× | 1e-04 |
| GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2 | 6 | 11.8× | 9e-04 |
| Regulation of TP53 Degradation | 5 | 11.6× | 2e-03 |
| Regulation of RUNX2 expression and activity | 8 | 11.5× | 7e-05 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein neddylation | 5 | 20.6× | 2e-03 |
| positive regulation of fibroblast proliferation | 8 | 13.9× | 1e-04 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 3 cancer types — BL, MLYM, NHL.
Clinical variants and AI predictions
ClinVar
1240 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 54 |
| Likely pathogenic | 93 |
| Uncertain significance | 418 |
| Likely benign | 533 |
| Benign | 57 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1076339 | NC_000002.11:g.(?47635530)(48035526_?)del | Pathogenic |
| 1200593 | NM_001190274.2(FBXO11):c.2744_2745del (p.Ser915fs) | Pathogenic |
| 1305954 | NM_001190274.2(FBXO11):c.1364G>A (p.Arg455His) | Pathogenic |
| 1329862 | NM_001190274.2(FBXO11):c.1797+1G>A | Pathogenic |
| 1329864 | NM_001190274.2(FBXO11):c.2338+1G>A | Pathogenic |
| 1329865 | NM_001190274.2(FBXO11):c.588-2A>G | Pathogenic |
| 1329866 | NM_001190274.2(FBXO11):c.1696del (p.Ile566fs) | Pathogenic |
| 1329869 | NM_001190274.2(FBXO11):c.500TCT[1] (p.Phe168del) | Pathogenic |
| 1329960 | NM_001190274.2(FBXO11):c.2592_2593del (p.Ile864fs) | Pathogenic |
| 1329962 | NM_001190274.2(FBXO11):c.2570_2572del (p.Asn857del) | Pathogenic |
| 1329963 | NM_001190274.2(FBXO11):c.2520_2521del (p.Ser841fs) | Pathogenic |
| 1329964 | NM_001190274.2(FBXO11):c.552del (p.Lys184fs) | Pathogenic |
| 1329965 | NM_001190274.2(FBXO11):c.2568_2572del (p.Asn857fs) | Pathogenic |
| 1329966 | NM_001190274.2(FBXO11):c.1798-1G>A | Pathogenic |
| 1329972 | NM_001190274.2(FBXO11):c.668del (p.Pro223fs) | Pathogenic |
| 1329974 | NM_001190274.2(FBXO11):c.1543_1557del (p.Phe515_Lys519del) | Pathogenic |
| 1329975 | NM_001190274.2(FBXO11):c.2392AAC[1] (p.Asn799del) | Pathogenic |
| 1329977 | NM_001190274.2(FBXO11):c.2748_2749del (p.Pro917fs) | Pathogenic |
| 1454648 | NC_000002.11:g.(?47948073)(48035379_?)del | Pathogenic |
| 1708215 | NM_001190274.2(FBXO11):c.2732_2738del (p.Thr911fs) | Pathogenic |
| 1711499 | NM_001190274.2(FBXO11):c.1537G>T (p.Gly513Ter) | Pathogenic |
| 1804626 | NM_001190274.2(FBXO11):c.2339-2A>G | Pathogenic |
| 2134559 | NM_001190274.2(FBXO11):c.2736dup (p.Tyr913fs) | Pathogenic |
| 2288541 | NM_001190274.2(FBXO11):c.592C>T (p.Arg198Ter) | Pathogenic |
| 2756341 | NM_001190274.2(FBXO11):c.442+3A>G | Pathogenic |
| 3247085 | NC_000002.11:g.(?48030569)(48034835_?)del | Pathogenic |
| 3251130 | NM_001190274.2(FBXO11):c.2327del (p.Gly776fs) | Pathogenic |
| 3364840 | NM_001190274.2(FBXO11):c.2168GAA[1] (p.Arg724del) | Pathogenic |
| 3377013 | NM_001190274.2(FBXO11):c.1646GAG[1] (p.Gly550del) | Pathogenic |
| 3393036 | NM_001190274.2(FBXO11):c.2138G>A (p.Trp713Ter) | Pathogenic |
SpliceAI
3871 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 2:47790918:T:TA | acceptor_gain | 1.0000 |
| 2:47790925:A:AG | acceptor_gain | 1.0000 |
| 2:47790926:G:GG | acceptor_gain | 1.0000 |
| 2:47790926:GTT:G | acceptor_gain | 1.0000 |
| 2:47796049:G:GT | donor_gain | 1.0000 |
| 2:47796061:G:GT | donor_gain | 1.0000 |
| 2:47803682:ACAG:A | donor_loss | 1.0000 |
| 2:47803683:CAGG:C | donor_loss | 1.0000 |
| 2:47803684:AGGTA:A | donor_loss | 1.0000 |
| 2:47803685:GG:G | donor_loss | 1.0000 |
| 2:47803686:G:GC | donor_loss | 1.0000 |
| 2:47803687:T:A | donor_loss | 1.0000 |
| 2:47804905:CACA:C | acceptor_loss | 1.0000 |
| 2:47804907:CA:C | acceptor_loss | 1.0000 |
| 2:47804908:AG:A | acceptor_gain | 1.0000 |
| 2:47804908:AGGCT:A | acceptor_gain | 1.0000 |
| 2:47804909:GG:G | acceptor_gain | 1.0000 |
| 2:47804909:GGCT:G | acceptor_gain | 1.0000 |
| 2:47804909:GGCTG:G | acceptor_gain | 1.0000 |
| 2:47805023:GTCAG:G | donor_gain | 1.0000 |
| 2:47805024:TCAGG:T | donor_loss | 1.0000 |
| 2:47805025:CAGGT:C | donor_loss | 1.0000 |
| 2:47805026:AGG:A | donor_loss | 1.0000 |
| 2:47805027:GGT:G | donor_loss | 1.0000 |
| 2:47805028:G:T | donor_loss | 1.0000 |
| 2:47805029:T:G | donor_loss | 1.0000 |
| 2:47805614:TAAG:T | acceptor_loss | 1.0000 |
| 2:47805615:A:AG | acceptor_gain | 1.0000 |
| 2:47805615:AAG:A | acceptor_gain | 1.0000 |
| 2:47805615:AAGGT:A | acceptor_gain | 1.0000 |
AlphaMissense
6177 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 2:47808205:A:C | C899W | 1.000 |
| 2:47808206:C:G | C899S | 1.000 |
| 2:47808206:C:T | C899Y | 1.000 |
| 2:47808207:A:G | C899R | 1.000 |
| 2:47808207:A:T | C899S | 1.000 |
| 2:47808230:C:T | G891D | 1.000 |
| 2:47808231:C:G | G891R | 1.000 |
| 2:47808232:A:C | C890W | 1.000 |
| 2:47808233:C:A | C890F | 1.000 |
| 2:47808233:C:G | C890S | 1.000 |
| 2:47808233:C:T | C890Y | 1.000 |
| 2:47808234:A:G | C890R | 1.000 |
| 2:47808234:A:T | C890S | 1.000 |
| 2:47808236:T:A | D889V | 1.000 |
| 2:47808236:T:C | D889G | 1.000 |
| 2:47808236:T:G | D889A | 1.000 |
| 2:47808237:C:G | D889H | 1.000 |
| 2:47808238:A:C | C888W | 1.000 |
| 2:47808239:C:A | C888F | 1.000 |
| 2:47808239:C:G | C888S | 1.000 |
| 2:47808239:C:T | C888Y | 1.000 |
| 2:47808240:A:C | C888G | 1.000 |
| 2:47808240:A:G | C888R | 1.000 |
| 2:47808240:A:T | C888S | 1.000 |
| 2:47808241:G:C | F887L | 1.000 |
| 2:47808241:G:T | F887L | 1.000 |
| 2:47808242:A:C | F887C | 1.000 |
| 2:47808242:A:G | F887S | 1.000 |
| 2:47808243:A:G | F887L | 1.000 |
| 2:47808244:A:C | F886L | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000037456 (2:47874935 G>A,C,T), RS1000058174 (2:47900446 G>A), RS1000067880 (2:47878369 T>C,G), RS1000096709 (2:47876371 T>G), RS1000128385 (2:47904927 CG>C,CGG,CGGGG), RS1000140122 (2:47829611 G>C,T), RS1000147193 (2:47824080 A>G), RS1000147911 (2:47859887 C>A,T), RS1000228757 (2:47838504 A>C,T), RS1000229528 (2:47887660 A>G), RS1000258482 (2:47825772 T>C), RS1000283553 (2:47887393 G>A), RS1000291383 (2:47825952 A>G), RS1000299434 (2:47900655 T>A,C), RS1000302168 (2:47887848 T>A)
Disease associations
OMIM: gene MIM:607871 | disease phenotypes: MIM:618089, MIM:614325, MIM:614350
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| intellectual developmental disorder with dysmorphic facies and behavioral abnormalities | Definitive | Autosomal dominant |
Mondo (11): intellectual disability (MONDO:0001071), intellectual developmental disorder with dysmorphic facies and behavioral abnormalities (MONDO:0060760), neurodevelopmental disorder (MONDO:0700092), Pitt-Hopkins-like syndrome 2 (MONDO:0013690), Lynch syndrome 5 (MONDO:0013710), Lynch syndrome (MONDO:0005835), hereditary neoplastic syndrome (MONDO:0015356), breast cancer (MONDO:0007254), endometrial carcinoma (MONDO:0002447), papillary carcinoma of the corpus uteri (MONDO:0016268), obesity disorder (MONDO:0011122)
Orphanet (8): OBSOLETE: Pitt-Hopkins-like syndrome (Orphanet:221150), NRXN1-related severe neurodevelopmental disorder-motor stereotypies-chronic constipation-sleep-wake cycle disturbance (Orphanet:600663), Lynch syndrome (Orphanet:144), Inherited cancer-predisposing syndrome (Orphanet:140162), Serous carcinoma of the corpus uteri (Orphanet:213726), Obesity due to melanocortin 4 receptor deficiency (Orphanet:71529), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658), NON RARE IN EUROPE: Non rare obesity (Orphanet:521399)
HPO phenotypes
123 total (30 of 123 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000028 | Cryptorchidism |
| HP:0000098 | Tall stature |
| HP:0000154 | Wide mouth |
| HP:0000160 | Narrow mouth |
| HP:0000175 | Cleft palate |
| HP:0000179 | Thick lower lip vermilion |
| HP:0000193 | Bifid uvula |
| HP:0000218 | High palate |
| HP:0000219 | Thin upper lip vermilion |
| HP:0000232 | Everted lower lip vermilion |
| HP:0000248 | Brachycephaly |
| HP:0000252 | Microcephaly |
| HP:0000256 | Macrocephaly |
| HP:0000276 | Long face |
| HP:0000278 | Retrognathia |
| HP:0000280 | Coarse facial features |
| HP:0000286 | Epicanthus |
| HP:0000293 | Full cheeks |
| HP:0000303 | Mandibular prognathia |
| HP:0000307 | Pointed chin |
| HP:0000316 | Hypertelorism |
| HP:0000319 | Smooth philtrum |
| HP:0000322 | Short philtrum |
| HP:0000325 | Triangular face |
| HP:0000337 | Broad forehead |
| HP:0000343 | Long philtrum |
| HP:0000347 | Micrognathia |
| HP:0000348 | High forehead |
| HP:0000358 | Posteriorly rotated ears |
GWAS associations
15 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001851_12 | Schizophrenia | 6.000000e-06 |
| GCST003831_4 | Asthma | 3.000000e-06 |
| GCST004861_38 | Itch intensity from mosquito bite | 4.000000e-07 |
| GCST004861_40 | Itch intensity from mosquito bite | 3.000000e-08 |
| GCST004862_174 | Itch intensity from mosquito bite adjusted by bite size | 2.000000e-07 |
| GCST004865_58 | Itch intensity from mosquito bite adjusted by bite size | 7.000000e-06 |
| GCST004865_59 | Itch intensity from mosquito bite adjusted by bite size | 8.000000e-08 |
| GCST006976_66 | Macular thickness | 5.000000e-10 |
| GCST007576_189 | Chronotype | 2.000000e-08 |
| GCST010002_391 | Refractive error | 6.000000e-09 |
| GCST010320_53 | PR interval | 7.000000e-08 |
| GCST010321_190 | PR interval | 5.000000e-09 |
| GCST011617_33 | Cortical surface area | 2.000000e-16 |
| GCST90000025_742 | Appendicular lean mass | 8.000000e-13 |
| GCST90011899_3 | Aspartate aminotransferase levels | 5.000000e-12 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008377 | mosquito bite reaction itch intensity measurement |
| EFO:0008378 | mosquito bite reaction size measurement |
| EFO:0008328 | chronotype measurement |
| EFO:0004462 | PR interval |
| EFO:0004980 | appendicular lean mass |
| EFO:0004736 | aspartate aminotransferase measurement |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D009386 | Neoplastic Syndromes, Hereditary | C04.700; C16.320.700 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
| C563456 | Colorectal Cancer, Hereditary Nonpolyposis, Type 5 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4879484 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — 2.1.1.- Protein arginine N-methyltransferases
CTD chemical–gene interactions
43 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, decreases expression | 4 |
| graphene oxide | increases expression | 2 |
| Estradiol | affects expression, affects cotreatment, increases expression | 2 |
| Formaldehyde | decreases expression | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 2 |
| Cadmium Chloride | decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | increases expression | 1 |
| sodium arsenite | decreases expression, increases abundance | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| K 7174 | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| picoxystrobin | increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Arbutin | increases expression | 1 |
| Arsenic | increases abundance, decreases expression | 1 |
| Aspirin | increases expression | 1 |
| Atrazine | increases expression | 1 |
| Caffeine | decreases phosphorylation | 1 |
| Cisplatin | decreases expression | 1 |
| Bucladesine | affects cotreatment, increases expression | 1 |
| Endosulfan | increases expression, decreases expression | 1 |
| Methyl Methanesulfonate | decreases expression | 1 |
| Paraquat | decreases expression | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Progesterone | increases expression | 1 |
| Rotenone | increases expression | 1 |
ChEMBL screening assays
2 unique, capped per target: 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4833660 | Binding | Inhibition of PRMT9 (unknown origin) at 10 uM using SAM as substrate measured up to 960 mins by AlphaScreen microplate reader assay relative to control | Discovery of IHMT-EZH2-115 as a Potent and Selective Enhancer of Zeste Homolog 2 (EZH2) Inhibitor for the Treatment of B-Cell Lymphomas. — J Med Chem |
Cellosaurus cell lines
1 cell lines: 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1S0 | Abcam HeLa FBXO11 KO | Cancer cell line | Female |
Clinical trials (associated diseases)
298 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02304302 | PHASE2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | PHASE2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | PHASE2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | PHASE2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT05273320 | PHASE1 | COMPLETED | Clinical Trial of Nabilone for Aggression in Adults With Intellectual and Developmental Disabilities |
| NCT05301361 | PHASE1 | ENROLLING_BY_INVITATION | Sensitivity of the NIH Toolbox to Stimulant Treatment in Intellectual Disabilities |
| NCT06016764 | PHASE1 | COMPLETED | Use of MRI and cTBS for Catatonia in Autism |
| NCT06586827 | PHASE1 | COMPLETED | Impact of Competency-Based Training and Technical Assistance Employment Outcomes of Individuals With ID/DD |
| NCT07531940 | PHASE1 | NOT_YET_RECRUITING | Escalating Doses of Memantine in Down Syndrome (MEDS-123) |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT03479476 | PHASE2/PHASE3 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome |
| NCT02616796 | PHASE1/PHASE2 | COMPLETED | Effects of Social Gaze Training on Brain and Behavior in Fragile X Syndrome |
| NCT06860672 | EARLY_PHASE1 | RECRUITING | Clinical Trial of the Dual Vector Base Editor for the Treatment of the CHD3-R1025W Mutation |
| NCT00597948 | Not specified | COMPLETED | Healthy Lifestyles for People With Intellectual Disabilities |
| NCT01087320 | Not specified | RECRUITING | Genome Medical Sequencing for Gene Discovery |
| NCT01652963 | Not specified | UNKNOWN | Picture-based Computerised Assessment and Training of Cognitive Behaviour Therapy Skills |
| NCT01695395 | Not specified | COMPLETED | Mental Health Care Provision for Adults With Intellectual Disability and a Mental Disorder |
| NCT01867554 | Not specified | COMPLETED | Research and Characterization of New Genes Involved in Intellectual Disability |
| NCT01915381 | Not specified | COMPLETED | Improving Adherence Healthy Lifestyle With a Smartphone Application Based on Adults With Intellectual Disabilities |
| NCT01988623 | Not specified | COMPLETED | Pivotal Response Treatment for Individuals With Intellectual Disabilities |
| NCT02099773 | Not specified | COMPLETED | Support Staff-client Interactions With Augmentative and Alternative Communication |
| NCT02136849 | Not specified | COMPLETED | Inter-regional Project of the Great Western Exploration Approach for Exome Molecular Causes Severe Intellectual Disability Isolated or Syndromic |
| NCT02225041 | Not specified | COMPLETED | Sedation Strategy and Cognitive Outcome After Critical Illness in Early Childhood |
| NCT02414438 | Not specified | COMPLETED | Establishing the Clinical Utility of First StepDx PLUS and NextStepDx PLUS Study |
Related Atlas pages
- Associated diseases: intellectual developmental disorder with dysmorphic facies and behavioral abnormalities
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): endometrial carcinoma, hereditary neoplastic syndrome, intellectual developmental disorder with dysmorphic facies and behavioral abnormalities, Lynch syndrome, Lynch syndrome 5, obesity disorder, papillary carcinoma of the corpus uteri, Pitt-Hopkins-like syndrome 2