FBXO32

gene
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Also known as MAFbxATROGIN1Fbx32

Summary

FBXO32 (F-box protein 32, HGNC:16731) is a protein-coding gene on chromosome 8q24.13, encoding F-box only protein 32 (Q969P5). Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of the ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbxs class and contains an F-box domain. This protein is highly expressed during muscle atrophy, whereas mice deficient in this gene were found to be resistant to atrophy. This protein is thus a potential drug target for the treatment of muscle atrophy. Alternative splicing results in multiple transcript variants encoding different isoforms.

Source: NCBI Gene 114907 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): dilated cardiomyopathy (Limited, ClinGen)
  • GWAS associations: 20
  • Clinical variants (ClinVar): 64 total — 1 likely-pathogenic
  • MANE Select transcript: NM_058229

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:16731
Approved symbolFBXO32
NameF-box protein 32
Location8q24.13
Locus typegene with protein product
StatusApproved
AliasesMAFbx, ATROGIN1, Fbx32
Ensembl geneENSG00000156804
Ensembl biotypeprotein_coding
OMIM606604
Entrez114907

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 4 retained_intron, 4 protein_coding

ENST00000287396, ENST00000443022, ENST00000517956, ENST00000520511, ENST00000521719, ENST00000524000, ENST00000889272, ENST00000889273

RefSeq mRNA: 3 — MANE Select: NM_058229 NM_001242463, NM_058229, NM_148177

CCDS: CCDS56553, CCDS6345

Canonical transcript exons

ENST00000517956 — 9 exons

ExonStartEnd
ENSE00001090851123540899123541206
ENSE00002136185123497889123503462
ENSE00003460761123533191123533240
ENSE00003465283123504604123504747
ENSE00003495714123514240123514333
ENSE00003539010123534702123534814
ENSE00003557203123513198123513382
ENSE00003609039123531898123531990
ENSE00003629790123506392123506574

Expression profiles

Bgee: expression breadth ubiquitous, 257 present calls, max score 99.69.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 41.9946 / max 2499.6126, expressed in 1545 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter IDTPM avgSamples expressed
9472941.43571540
947260.4203131
947270.138754

Top tissues by expression

262 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
cardiac muscle of right atriumUBERON:000337999.69gold quality
deltoidUBERON:000147699.53gold quality
tibialis anteriorUBERON:000138599.47gold quality
left ventricle myocardiumUBERON:000656699.23gold quality
gastrocnemiusUBERON:000138899.20gold quality
quadriceps femorisUBERON:000137799.13gold quality
skeletal muscle tissueUBERON:000113499.08gold quality
vastus lateralisUBERON:000137999.05gold quality
muscle tissueUBERON:000238598.90gold quality
skeletal muscle organUBERON:001489298.85gold quality
muscle of legUBERON:000138398.79gold quality
mucosa of stomachUBERON:000119998.69gold quality
biceps brachiiUBERON:000150798.62gold quality
skeletal muscle tissue of biceps brachiiUBERON:000450298.58gold quality
hindlimb stylopod muscleUBERON:000425298.53gold quality
popliteal arteryUBERON:000225098.48gold quality
tibial arteryUBERON:000761098.48gold quality
skeletal muscle tissue of rectus abdominisUBERON:000451198.47gold quality
muscle layer of sigmoid colonUBERON:003580598.33gold quality
body of tongueUBERON:001187698.19gold quality
arteryUBERON:000163798.02gold quality
descending thoracic aortaUBERON:000234597.81gold quality
aortaUBERON:000094797.80gold quality
deciduaUBERON:000245097.79gold quality
smooth muscle tissueUBERON:000113597.75gold quality
myocardiumUBERON:000234997.54gold quality
body of uterusUBERON:000985397.52gold quality
lower esophagusUBERON:001347397.36gold quality
lower esophagus muscularis layerUBERON:003583397.36gold quality
esophagogastric junction muscularis propriaUBERON:003584197.11gold quality

Single-cell (SCXA)

Detected in 4 experiment(s), a significant marker in 3.

ExperimentMarker?Max mean expression
E-ENAD-21yes5507.36
E-CURD-7yes5324.07
E-GEOD-99795no39.50
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): EZH2, FOXO1, FOXO3, FOXO4, FOXO6, MAF, MYOG, NR3C1, SMAD4, STAT3, TP53, TP63

miRNA regulators (miRDB)

255 targeting FBXO32, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-30A-5P100.0076.313233
HSA-MIR-30B-5P100.0076.293248
HSA-MIR-30C-5P100.0076.293248
HSA-MIR-30D-5P100.0076.323233
HSA-MIR-30E-5P100.0076.323242
HSA-MIR-6798-5P100.0065.77699
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-5692A100.0074.406850
HSA-MIR-3925-3P100.0069.951237
HSA-MIR-4768-5P100.0069.492861
HSA-MIR-6833-3P100.0070.633197
HSA-MIR-3163100.0077.238605
HSA-MIR-4776-3P100.0068.731340
HSA-MIR-548AW99.9972.573559
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-453199.9969.703181
HSA-MIR-428299.9975.366408
HSA-MIR-450099.9972.722367
HSA-MIR-196A-1-3P99.9972.152772
HSA-MIR-366299.9973.825684
HSA-MIR-1213699.9872.815713
HSA-MIR-520D-5P99.9873.344883
HSA-MIR-524-5P99.9873.434882
HSA-MIR-548N99.9871.944170
HSA-MIR-569699.9872.364487
HSA-MIR-19A-3P99.9875.332762
HSA-MIR-19B-3P99.9875.442754
HSA-MIR-1185-1-3P99.9871.042593
HSA-MIR-1185-2-3P99.9871.042593
HSA-LET-7F-2-3P99.9870.982588

Literature-anchored findings (GeneRIF, showing 40)

  • Human skeletal muscle atrophy in the amyotrophic lateral sclerosis shows an increase in atrogin-1 & a decrease in Akt. The transcriptional regulation of human atrogin-1 may be controlled by an Akt-mediated transcription factor other than FKHR. (PMID:16507768)
  • results suggest that Cbl-b- or atrogin-1-mediated ubiquitination plays an important role in unloading-induced muscle atrophy, and that unloading stress may preferentially inhibit transcriptional responses in skeletal muscle (PMID:16868939)
  • Atrogin-1 mRNA expression was significantly increased in quadriceps of patients with COPD; transcriptional regulation of atrogin-1 and MuRF1 may occur via FoxO-1, but independently of AKT (PMID:17478621)
  • CSRP3, MUSTN1, SIX1, and FBXO32 expression changes in response to lengthening and shortening contractions in human muscle (PMID:17519359)
  • We conclude that smoking impairs the muscle protein synthesis process and increases the expression of genes associated with impaired muscle maintenance; smoking therefore likely increases the risk of sarcopenia. (PMID:17609255)
  • Expression of mRNA for MuRF-1 increased approximately 3-fold at 10 days without changes in MAFbx or tripeptidyl peptidase II mRNA, but all decreased between 10 and 21 days of muscle disuse. (PMID:17901116)
  • MuRF-1 and MAFbx, are differently affected by the exercise as well as by repeated exercise (PMID:17971512)
  • Results showed upregulation of MuRf1 and MAFbx in atrophies muscle and support their role as regulatory peptides in various conditions which lead to muscle atrophy. (PMID:17977773)
  • atrogin-1 may be a critical mediator of the muscle damage induced by statins. (PMID:17992259)
  • Testosterone represses MAFbx expression via interactions of the AR with Oct-1. (PMID:18599544)
  • Review discusses findings implicating atrogin-1, a gene required for muscle atrophy, in the pathophysiology of statin-induced muscle injury. (PMID:18681786)
  • atrogin-1 specifically targets truncated M7t-cMyBP-C, but not WT-cMyBP-C, for proteasomal degradation and that MuRF1 indirectly reduces cMyBP-C levels by regulating the transcription of myosin heavy chain. (PMID:19850579)
  • Reduced expression of MuRF1 and MAFbx in the myocardium might permit hypertrophy characteristic of the early post-infarction remodeling phase. (PMID:19859778)
  • The novel tumor suppressor FBXO32 is epigenetically silenced in ovarian cancer cell lines with disrupted TGF-beta/SMAD4 signaling, and FBXO32 methylation status predicts survival in patients with ovarian cancer. (PMID:20065949)
  • atrophic AKT-FOXO signaling play major roles in eliciting pathological changes associated with diaphragm disuse. (PMID:20833824)
  • 11beta-HSD1 controls glucocorticoid-induced protein degradation in human and murine skeletal muscle via regulation of the E3 ubiquitin ligases Atrogin-1 and MuRF-1. (PMID:21304964)
  • SerpinB5 interacts with KHDRBS3 and FBXO32, and KHDRBS3 can interact with FBXO32 mRNA. (PMID:21725612)
  • investigation of factors regulating expression of two ubiquitin ligases (MAFbx and MURF1) in skeletal muscle (i.e., vastus lateralis): effects of resistance exercise and anabolic dietary supplement (i.e., branched-chain amino acids) (PMID:22127230)
  • MAFbx contains two functional nuclear localization signals (NLS). Mutation or deletion of only one NLS induced cytoplasmic localization of MAFbx. (PMID:22249105)
  • Cardiac and vascular atrogin-1 mRNA expression is not associated with dexamethasone efficacy in the monocrotaline model of pulmonary hypertension. (PMID:22311109)
  • Resistance exercise resulted in a significant downregulation of MSTN and FBXO32 mRNA expression and a significant upregulation in FSTL3 and SMURF1 mRNA expression, and carbohydrate and protein feeding have little influence on the these markers expression. (PMID:22476926)
  • In a transgenic mouse model of autoimmune myositis, cellular inflammation is associated with FOXO3A translocation and Atrogin-1 induction. (PMID:22590725)
  • Data suggest expression of atrogin-1 and MuRF-1 (muscle-specific RING finger protein 1) play role in aging-related decrease in muscle mass (i.e., sarcopenia); up-regulation of atrogin-1/MuRF-1 has potential to prevent/reverse sarcopenia. [REVIEW] (PMID:22815045)
  • ATROGIN1 gene expression is increased in patients with severe burn injury. (PMID:23816995)
  • Quadriceps muscle atrogin-1 levels were lower in COPD patients than controls, but similar in patients with a low and normal fat-free mass index. Atrogin1 levels were not associated with quadriceps fiber cross-sectional area or strength in patients. (PMID:23844868)
  • EZH2 is a key factor in the proliferation and survival of PAX3-FOXO1 alveolar RMS cells working, at least in part, by repressing FBXO32 (PMID:24213577)
  • In conclusion, atrogin-1, MuRF1, FOXO1/3A, and eIF3-f mRNA, and protein levels, are differentially regulated by exercise contraction mode but not WPH supplementation combined with hypertrophy-inducing training. (PMID:24458747)
  • MAFbx not only regulates protein degradation, but also reduces protein synthesis, exerting a dual role in regulating cardiac mass and preventing from cardiac hypertrophy. (PMID:24650875)
  • FBXO32 methylation status and protein expression were independently associated with survival in ESCC. FBXO32 may be a functional tumor suppressor. Its inactivation through promoter methylation could play an important role in ESCC carcinogenesis. (PMID:24798237)
  • both MuRF1 and MAFbx are enriched in skeletal, cardiac, and smooth muscle–REVIEW (PMID:25096180)
  • Atrogin-1 expression tended to be increased in the skeletal muscle of patients with malignant disease even before cancer related cachexia weight loss. (PMID:25760630)
  • Vitamin D3 might have an inhibitory effect on the expression of MAFbx and MuRF1 in skeletal muscle. (PMID:25876656)
  • FBXO32 targets Lys-326 of c-Myc to form polyubiquitin chains, resulting in inhibition of cell proliferation. (PMID:25944903)
  • Expression of USP19 correlates with that of MuRF1 and MAFbx/atrogin-1 in skeletal muscles (PMID:26048142)
  • role of the muscle specific E3s MuRF-1 and MAFbx in skeletal muscle wasting during various pathologies, as well as their regulation by modifiable lifestyle factors, were explored (review) (PMID:26738803)
  • Our results indicate that abnormal SCF activity with subsequent impairment of the autophagic flux due to a novel FBXO32 mutation is implicated in the pathogenesis of Dilated cardiomyopathy . (PMID:26753747)
  • Our data suggest that FBXO32 is a candidate gene for recessive familial dilated cardiomyopathy. Acting as a cardiac ubiquitin ligase, mutated FBXO32 could perturb the degradation of target proteins in the ubiquitin proteasome system. (PMID:26768247)
  • These results have revealed the roles for atrogin-1 in the regulation of smooth muscle contractility through enhancement of myocardin ubiquitylation/degradation and its transcriptional activity. (PMID:27403897)
  • the involvement of oxidative stress in the atrophy of COPD peripheral muscle cells in vitro, via the FoxO1/MuRF1/atrogin-1 signaling pathway of the ubiquitin/proteasome system (PMID:27526027)
  • Transcriptional analysis of endophilin-A mutant mice, complemented by proteomics, highlighted ataxia- and protein-homeostasis-related genes and revealed upregulation of the E3-ubiquitin ligase FBXO32/atrogin-1 and its transcription factor FOXO3A. (PMID:27720640)

Cross-species orthologs

5 orthologs

OrganismSymbolGene ID
danio_reriofbxo32ENSDARG00000040277
mus_musculusFbxo32ENSMUSG00000022358
rattus_norvegicusFbxo32ENSRNOG00000006738
drosophila_melanogasterCG11658FBGN0036196
caenorhabditis_elegansmfb-1WBGENE00008439

Paralogs (1): FBXO25 (ENSG00000147364)

Protein

Protein identifiers

F-box only protein 32Q969P5 (reviewed: Q969P5)

Alternative names: Atrogin-1, Muscle atrophy F-box protein

All UniProt accessions (1): Q969P5

UniProt curated annotations — full annotation on UniProt →

Function. Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins during skeletal muscle atrophy. Recognizes TERF1. Negatively regulates macrophage efferocytosis by promoting the ubiquitination of the transcription factor KLF4, suppressing the receptor tyrosine kinase MERTK transcription. Regulates LPS-induced apoptosis and mitochondrial dysfunction through ANXA1 ubiquitination and degradation. Mediates cyclin D1 protein stabilization via ‘Lys-27’-linked ubiquitination.

Subunit / interactions. Part of the SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complex SCF(FBXO32) formed of CUL1, SKP1, RBX1 and FBXO32. Interacts with cyclin D1/CCND1.

Subcellular location. Cytoplasm. Nucleus.

Tissue specificity. Specifically expressed in cardiac and skeletal muscle.

Disease relevance. Defects in FBXO32 are associated with susceptibility to dilated cardiomyopathy (DCM). A disorder characterized by ventricular and impaired systolic function, resulting in heart failure and arrhythmia. Patient are at risk of premature death.

Pathway. Protein modification; protein ubiquitination.

Isoforms (2)

UniProt IDNamesCanonical?
Q969P5-11yes
Q969P5-22

RefSeq proteins (3): NP_001229392, NP_478136, NP_680482 (=MANE)

Domains & families (InterPro)

IDNameType
IPR036047F-box-like_dom_sfHomologous_superfamily
IPR040394FBX25/32Family

UniProt features (10 total): short sequence motif 3, sequence variant 3, chain 1, domain 1, splice variant 1, mutagenesis site 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q969P5-F180.150.53

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Mutagenesis-validated functional residues (1):

PositionPhenotype
169significantly increases nuclear localization.

Function

Pathways and Gene Ontology

Reactome pathways

3 pathways

IDPathway
R-HSA-8951664Neddylation
R-HSA-9615017FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes
R-HSA-983168Antigen processing: Ubiquitination & Proteasome degradation

MSigDB gene sets: 309 (showing top): GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_DN, GSE45365_NK_CELL_VS_CD8A_DC_DN, SHEPARD_BMYB_MORPHOLINO_UP, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, HORIUCHI_WTAP_TARGETS_DN, GOBP_NEGATIVE_REGULATION_OF_PROTEOLYSIS, GOBP_REGULATION_OF_PROTEASOMAL_UBIQUITIN_DEPENDENT_PROTEIN_CATABOLIC_PROCESS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN, GOBP_CELLULAR_RESPONSE_TO_LIPID, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION, GOBP_RESPONSE_TO_CORTICOSTEROID, GCANCTGNY_MYOD_Q6, GOZGIT_ESR1_TARGETS_DN

GO Biological Process (4): response to denervation involved in regulation of muscle adaptation (GO:0014894), protein ubiquitination (GO:0016567), negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (GO:0062026), cellular response to dexamethasone stimulus (GO:0071549)

GO Molecular Function (2): ubiquitin-like ligase-substrate adaptor activity (GO:1990756), protein binding (GO:0005515)

GO Cellular Component (6): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), SCF ubiquitin ligase complex (GO:0019005), Z disc (GO:0030018)

Reactome top-level categories

Rollup of top-3 pathways:

CategoryPathways
Post-translational protein modification1
FOXO-mediated transcription1
Class I MHC mediated antigen processing & presentation1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure4
response to muscle inactivity1
regulation of muscle adaptation1
protein modification by small protein conjugation1
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1
negative regulation of proteasomal ubiquitin-dependent protein catabolic process1
regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1
cellular response to glucocorticoid stimulus1
response to dexamethasone1
cellular response to ketone1
enzyme-substrate adaptor activity1
binding1
intracellular membrane-bounded organelle1
nuclear lumen1
intracellular anatomical structure1
cytoplasm1
cullin-RING ubiquitin ligase complex1
I band1

Protein interactions and networks

STRING

2228 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
FBXO32TRIM63Q969Q1958
FBXO32YIPF1Q9Y548946
FBXO32CUL1Q13616932
FBXO32SKP1P34991894
FBXO32MSTNO14793873
FBXO32FOXO3O43524869
FBXO32MYOD1P15172858
FBXO32FOXO1Q12778837
FBXO32TRIM54Q9BYV2801
FBXO32MYOGP15173779
FBXO32IGF1P01343720
FBXO32RPS6KB1P23443706
FBXO32AKT1P31749703
FBXO32FOXO4P98177690
FBXO32PPARGC1AQ9UBK2664

IntAct

15 interactions, top by confidence:

ABTypeScore
EIF3FFBXO32psi-mi:“MI:0915”(physical association)0.600
FBXO32EIF3Fpsi-mi:“MI:0915”(physical association)0.600
FBXO32EIF3Fpsi-mi:“MI:0403”(colocalization)0.600
EIF2AK2ZC3H11Apsi-mi:“MI:0914”(association)0.480
FBXO32YTHDC1psi-mi:“MI:0915”(physical association)0.400
FBXO32MLH1psi-mi:“MI:0915”(physical association)0.370
CFL1PMLpsi-mi:“MI:0914”(association)0.350
KDM2AFBXO32psi-mi:“MI:0915”(physical association)0.000
FBXO32MYOGpsi-mi:“MI:0915”(physical association)0.000
FBXO32SKP1psi-mi:“MI:0915”(physical association)0.000

BioGRID (276): FBXO32 (Two-hybrid), FBXO32 (Affinity Capture-Western), MYOD1 (Biochemical Activity), FBXO32 (Affinity Capture-Western), EIF3F (Reconstituted Complex), FBXO32 (Affinity Capture-Western), KLF4 (Affinity Capture-Western), CUL1 (Affinity Capture-Western), RBX1 (Affinity Capture-Western), SKP1 (Affinity Capture-Western), FBXO32 (Affinity Capture-Western), FBXO32 (Affinity Capture-Western), FBXO32 (Affinity Capture-Western), FBXO32 (Affinity Capture-Western), SH3GL2 (Reconstituted Complex)

ESM2 similar proteins: A4IFQ0, A6QQW8, P48553, Q08BT5, Q0VA03, Q13769, Q14161, Q1A730, Q1RMS8, Q2KHT6, Q3B7L5, Q3T0J1, Q3TLI0, Q4R372, Q5M7Q1, Q5RAQ5, Q5REX9, Q5RFL7, Q5ZJK1, Q5ZML0, Q62784, Q641X7, Q66H91, Q68FX7, Q6P7Q1, Q6SP92, Q6ZPY2, Q76JQ2, Q8BIK4, Q8BKT7, Q8BXK4, Q8IWV8, Q8K3W0, Q8NFG4, Q8QZS3, Q8TCJ0, Q8WN69, Q8WN70, Q91W96, Q91Z62

Diamond homologs: Q1A730, Q1RMS8, Q2KHT6, Q2T9S7, Q4R372, Q641X7, Q8TCJ0, Q91Z62, Q969P5, Q9CPU7, Q9D2Y6

SIGNOR signaling

23 interactions.

AEffectBMechanism
FBXO32“down-regulates quantity by destabilization”MYOD1ubiquitination
YAP1down-regulatesFBXO32
FOXO3“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FOXO1“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FOXO4“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FOXO6“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FOXO“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FBXO32up-regulatesMuscle_atrophy
FBXO32“up-regulates activity”Muscle_atrophy
STAT3“up-regulates quantity by expression”FBXO32“transcriptional regulation”
FBXO32up-regulatesProtein_degradation
FBXO32“down-regulates quantity by destabilization”MYOD1binding
FBXO32“up-regulates activity”“Cullin 1-RBX1-Skp1”binding
MYOG“down-regulates activity”FBXO32binding

Disease & clinical

Clinical variants and AI predictions

ClinVar

64 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic1
Uncertain significance33
Likely benign1
Benign17

Top pathogenic / likely-pathogenic (1)

Variant IDHGVSClassification
1188824NM_058229.4(FBXO32):c.881AGA[1] (p.Lys295del)Likely pathogenic

SpliceAI

1181 predictions. Top by Δscore:

VariantEffectΔscore
8:123504599:CATA:Cdonor_loss1.0000
8:123504600:ATACC:Adonor_loss1.0000
8:123504601:TACCT:Tdonor_loss1.0000
8:123504748:C:CCacceptor_gain1.0000
8:123504748:CT:Cacceptor_loss1.0000
8:123504749:T:Gacceptor_loss1.0000
8:123504757:CAAA:Cacceptor_gain1.0000
8:123506388:TGAC:Tdonor_loss1.0000
8:123506390:A:AGdonor_loss1.0000
8:123506394:G:Adonor_gain1.0000
8:123506412:A:ACdonor_gain1.0000
8:123506413:C:CCdonor_gain1.0000
8:123506427:T:TAdonor_gain1.0000
8:123506570:GCAGG:Gacceptor_gain1.0000
8:123506571:CAGG:Cacceptor_gain1.0000
8:123506571:CAGGC:Cacceptor_gain1.0000
8:123506573:GG:Gacceptor_gain1.0000
8:123506574:GC:Gacceptor_loss1.0000
8:123506575:C:CCacceptor_gain1.0000
8:123506576:T:Cacceptor_loss1.0000
8:123513196:AC:Adonor_gain1.0000
8:123513197:CC:Cdonor_gain1.0000
8:123513384:T:Cacceptor_gain1.0000
8:123513384:T:TCacceptor_gain1.0000
8:123513388:G:GCacceptor_gain1.0000
8:123531891:GACTT:Gdonor_loss1.0000
8:123531892:ACTT:Adonor_loss1.0000
8:123531893:CTTA:Cdonor_loss1.0000
8:123531894:TTA:Tdonor_loss1.0000
8:123531895:T:TGdonor_loss1.0000

AlphaMissense

2353 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
8:123504609:A:GW325R1.000
8:123504609:A:TW325R1.000
8:123506430:A:GW266R1.000
8:123506430:A:TW266R1.000
8:123513263:A:GW196R1.000
8:123513263:A:TW196R1.000
8:123513277:C:TG191E1.000
8:123514284:G:TA141D1.000
8:123514290:C:TG139D1.000
8:123514291:C:GG139R1.000
8:123514292:A:CS138R1.000
8:123514292:A:TS138R1.000
8:123514294:T:GS138R1.000
8:123514296:A:GL137P1.000
8:123514332:A:GL125P1.000
8:123531950:A:GL107P1.000
8:123531968:C:TG101E1.000
8:123531969:C:AG101W1.000
8:123531969:C:GG101R1.000
8:123531969:C:TG101R1.000
8:123540951:A:GW22R1.000
8:123540951:A:TW22R1.000
8:123503383:A:GF353S0.999
8:123503404:G:TP346H0.999
8:123503445:G:CC332W0.999
8:123503447:A:GC332R0.999
8:123504607:C:AW325C0.999
8:123504607:C:GW325C0.999
8:123504622:A:CC320W0.999
8:123504623:C:TC320Y0.999

dbSNP variants (sampled 300 via entrez): RS1000002739 (8:123517744 A>G), RS1000073659 (8:123498130 A>C), RS1000268305 (8:123541458 C>A,G), RS1000309521 (8:123517514 T>A,G), RS1000349680 (8:123538139 A>G), RS1000402731 (8:123503869 A>G), RS1000489217 (8:123498505 G>A), RS1000501668 (8:123525669 C>T), RS1000546687 (8:123536721 T>A), RS1000605703 (8:123542902 G>C), RS1000613407 (8:123535053 G>T), RS1000617881 (8:123505590 G>C), RS1000656766 (8:123543204 G>A), RS1000724615 (8:123498071 A>G), RS1000725443 (8:123532718 G>A)

Disease associations

OMIM: gene MIM:606604 | disease phenotypes: MIM:192600

GenCC curated gene-disease

DiseaseClassificationInheritance
dilated cardiomyopathyLimitedAutosomal recessive

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
dilated cardiomyopathyLimitedAR

Mondo (2): familial hypertrophic cardiomyopathy (MONDO:0024573), dilated cardiomyopathy (MONDO:0005021)

Orphanet (2): Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155)

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

20 associations (top):

StudyTraitp-value
GCST004678_2Psychosis proneness (hypomanic personality scale)3.000000e-07
GCST004679_2Psychosis proneness (hypomanic personality scale and perceptual aberration scale)1.000000e-06
GCST004681_5Psychosis proneness (hypomanic personality scale and revised physical anhedonia scale)2.000000e-06
GCST004682_3Psychosis proneness (hypomanic personality scale and revised social anhedonia scale)2.000000e-07
GCST005580_262Intraocular pressure3.000000e-10
GCST005580_79Intraocular pressure2.000000e-11
GCST006061_183Atrial fibrillation9.000000e-17
GCST006061_26Atrial fibrillation1.000000e-16
GCST006061_84Atrial fibrillation1.000000e-10
GCST006065_24Glaucoma (primary open-angle)8.000000e-09
GCST006394_22Intraocular pressure1.000000e-14
GCST006395_10Glaucoma5.000000e-06
GCST006412_104Intraocular pressure4.000000e-17
GCST006414_131Atrial fibrillation4.000000e-19
GCST006414_60Atrial fibrillation1.000000e-09
GCST009725_24Intraocular pressure7.000000e-15
GCST010796_4661Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-08
GCST010796_4662Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-08
GCST010796_4663Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-08
GCST90011770_17Glaucoma (primary open-angle)4.000000e-22

EFO canonical traits (3, from GWAS)

EFO IDTrait name
EFO:0008337psychosis predisposition measurement
EFO:0004695intraocular pressure measurement
EFO:0004327electrocardiography

MeSH disease descriptors (2)

DescriptorNameTree numbers
D002311Cardiomyopathy, DilatedC14.280.195.160; C14.280.238.070; C16.320.488.750
D024741Cardiomyopathy, Hypertrophic, FamilialC14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

90 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
bisphenol Aincreases expression, affects cotreatment, increases methylation4
Estradioldecreases expression, decreases reaction, increases expression, affects cotreatment, increases reaction4
sodium arsenitedecreases expression, increases expression3
perfluorooctane sulfonic aciddecreases expression, increases expression3
Arsenicaffects expression, affects methylation, increases abundance, increases expression3
Sirolimusaffects cotreatment, affects expression, decreases reaction, increases expression3
(+)-JQ1 compoundaffects cotreatment, affects expression, decreases expression2
Resveratroldecreases expression, increases expression2
Temozolomideaffects response to substance, increases expression2
Air Pollutantsdecreases expression, increases abundance2
Benzo(a)pyrenedecreases expression, decreases methylation, increases methylation2
Doxorubicinaffects expression, increases expression2
Tetrachlorodibenzodioxinincreases expression, decreases expression2
Cyclosporineincreases expression2
Aflatoxin B1decreases expression, increases methylation2
Sodium Seleniteincreases expression2
Particulate Matterdecreases expression, increases abundance2
aristolochic acid Iincreases expression1
GSK-J4increases expression1
afuresertibincreases expression1
methylmercuric chlorideincreases expression1
triphenyl phosphateaffects expression1
sodium arsenateincreases abundance, increases expression1
ascorbate-2-phosphateaffects cotreatment, increases expression, affects binding1
mono-(2-ethylhexyl)phthalateincreases abundance, increases methylation1
sulforaphanedecreases expression1
nickel chlorideincreases expression1
perfluorooctanoic aciddecreases expression1
zinc chromateincreases abundance, increases expression1
ochratoxin Adecreases expression1

Clinical trials (associated diseases)

160 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00374465PHASE4UNKNOWNTherapy With Verapamil or Carvedilol in Chronic Heart Failure
NCT01293903PHASE4COMPLETEDStudy of Qiliqiangxin Capsule to Treat Dilated Cardiomyopathy
NCT01557140PHASE4COMPLETEDA Randomized Trial of Carvedilol in Chronic Chagas Cardiomyopathy
NCT01917149PHASE4COMPLETEDSupramaximal Titrated Inhibition of RAAS in Dilated Cardiomyopathy
NCT02115581PHASE4COMPLETEDCoenzyme Q10 Supplementation in Children With Idiopathic Dilated Cardiomyopathy
NCT06236022PHASE4RECRUITINGThe Effects of Sirolimus in Patients With Dilated Cardiomyopathy Infected With Kaposi Sarcoma-associated Virus
NCT00333827PHASE3COMPLETEDCell Therapy In Dilated Cardiomyopathy
NCT00505154PHASE3COMPLETEDEffect of Rosuvastatin on Left Ventricular Remodeling
NCT01223703PHASE3COMPLETEDPUFAs and Left Ventricular Function in Heart Failure
NCT01583114PHASE3TERMINATEDPREclinical Mutation CARriers From Families With DIlated Cardiomyopathy and ACE Inhibitors
NCT01914081PHASE3UNKNOWNResveratrol: A Potential Anti- Remodeling Agent in Heart Failure, From Bench to Bedside
NCT02989181PHASE3UNKNOWNContinues Positive Airway Pressure Treatment for Patients With Dilated Cardiomyopathy and Obstructive Sleep Apnea
NCT03439514PHASE3TERMINATEDA Study of ARRY-371797 (PF-07265803) in Patients With Symptomatic Dilated Cardiomyopathy Due to a Lamin A/C Gene Mutation
NCT05237323PHASE3COMPLETEDMicophenolate Mofetil Versus Azathioprine in Myocarditis
NCT05849766PHASE3COMPLETEDEffect of Dapagliflozin on Cardiac Structure, Function and Secondary Mitral Regurgitation in Patients with Left Ventricle Dysfunction
NCT06250257PHASE3RECRUITINGBromocriptine in Dilated Cardiomyopathy Among Women of Reproductive Age
NCT00629018PHASE2COMPLETEDSafety and Efficacy Study of Stem Cell Transplantation to Treat Dilated Cardiomyopathy
NCT00629096PHASE2COMPLETEDIntracoronary Infusion of Autologous Bone Marrow Cells for Treatment of Idiopathic Dilated Cardiomyopathy
NCT00765518PHASE2COMPLETEDUse of Ixmyelocel-T (Formerly Cardiac Repair Cell [CRC] Treatment) in Patients With Heart Failure Due to Dilated Cardiomyopathy (IMPACT-DCM)
NCT00847964PHASE2COMPLETEDSafety and Feasibility of Algisyl-LVR™ as a Method of Left Ventricular Restoration in Patients With DCM Undergoing Open-heart Surgery
NCT01020968PHASE2COMPLETEDUse of Ixmyelocel-T (Formerly Catheter-based Cardiac Repair Cell [CRC]) Treatment in Patients With Heart Failure Due to Dilated Cardiomyopathy
NCT01302171PHASE2COMPLETEDBone Marrow Derived Adult Stem Cells for Dilated Cardiomyopathy
NCT01350310PHASE2COMPLETEDSafety and Efficacy Study of Intramyocardial Stem Cell Therapy in Patients With Dilated Cardiomyopathy
NCT02133911PHASE2COMPLETEDA Pilot Trial of Ranolazine to Treat Patients With Dilated Cardiomyopathy
NCT03071653PHASE2SUSPENDEDLeft Cardiac Sympathetic Denervation for Cardiomyopathy Feasibility Pilot Study
NCT03572660PHASE2ACTIVE_NOT_RECRUITINGUse of Bone Marrow Derived Stem Cell and G-CSF With Circulatory Assistance in the Treatment of DCM
NCT03775070PHASE2COMPLETEDSimvastatin Therapy in Patients With Dilated Cardiomyopathy.
NCT04405804PHASE2UNKNOWNEarly Administration of Ivabradine in Children With Heart Failure
NCT05410873PHASE2COMPLETEDExamining the Effects of Mitochondrial Oxidative Stress in DCM
NCT06632834PHASE2RECRUITINGOutcome-targeted Therapy: Principle and Outcome Evaluation: Clinical Study and Phenotype-genotype Correlation
NCT00585546PHASE1TERMINATEDHarefield Recovery Protocol Study for Patients With Refractory Chronic Heart Failure
NCT02293603PHASE1UNKNOWNDilated cardiomYopathy iNtervention With Allogeneic MyocardIally-regenerative Cells (DYNAMIC)
NCT03062956PHASE1COMPLETEDA Single Ascending Dose Study Assessing the Safety, Tolerability, PK and PD of MYK-491
NCT03129568PHASE1COMPLETEDTranscoronary Infusion of Cardiac Progenitor Cells in Pediatric Dilated Cardiomyopathy
NCT04982081PHASE1UNKNOWNTreating Congestive HF With hiPSC-CMs Through Endocardial Injection
NCT06381466PHASE1TERMINATEDA Study to Investigate Safety, Tolerability, and Pharmacokinetics of Oral AZD0233 Compared With Placebo in Healthy Adult Participants.
NCT06464588PHASE1RECRUITINGA Phase 1 Open-Label Study of the Safety of Intravenous Allogeneic Neonatal Mesenchymal Cells (nMSCs) in Young Adult (1A) and Pediatric (1B) Patients With Dilated Cardiomyopathy (DCM)
NCT06902896PHASE1COMPLETEDSafety and Efficacy of FAP iCDC in End-stage Dilated Cardiomyopathy
NCT07137338PHASE1RECRUITINGA Phase 1 AAV Gene Therapy Trial Evaluating Safety and Preliminary Efficacy of RP-A701 in Subjects With BAG3 Dilated Cardiomyopathy
NCT07241104PHASE1RECRUITINGA Study of AZD4063 in PLN R14del Dilated Cardiomyopathy