FCER2

gene
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Also known as CLEC4JCD23FCErIIFcepsilonRII

Summary

FCER2 (Fc epsilon receptor II, HGNC:3612) is a protein-coding gene on chromosome 19p13.2, encoding Low affinity immunoglobulin epsilon Fc receptor (P06734). Low-affinity receptor for immunoglobulin E (IgE) and CR2/CD21.

The protein encoded by this gene is a B-cell specific antigen, and a low-affinity receptor for IgE. It has essential roles in B cell growth and differentiation, and the regulation of IgE production. This protein also exists as a soluble secreted form, then functioning as a potent mitogenic growth factor. Alternatively spliced transcript variants encoding different isoforms have been described for this gene.

Source: NCBI Gene 2208 — RefSeq curated summary.

At a glance

  • GWAS associations: 2
  • Clinical variants (ClinVar): 64 total
  • Druggable target: yes — 1 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_001220500

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:3612
Approved symbolFCER2
NameFc epsilon receptor II
Location19p13.2
Locus typegene with protein product
StatusApproved
AliasesCLEC4J, CD23, FCErII, FcepsilonRII
Ensembl geneENSG00000104921
Ensembl biotypeprotein_coding
OMIM151445
Entrez2208

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 4 protein_coding, 3 retained_intron

ENST00000346664, ENST00000360067, ENST00000593418, ENST00000597312, ENST00000597921, ENST00000597934, ENST00000598803

RefSeq mRNA: 3 — MANE Select: NM_001220500 NM_001207019, NM_001220500, NM_002002

CCDS: CCDS12184

Canonical transcript exons

ENST00000597921 — 11 exons

ExonStartEnd
ENSE0000297893577020157702131
ENSE0000318265276887767689430
ENSE0000348764976968257696914
ENSE0000351523176970137697075
ENSE0000352994576997397699845
ENSE0000353780476987417698854
ENSE0000358425776983567698409
ENSE0000360935676972367697298
ENSE0000362247576975277697589
ENSE0000362822776901597690265
ENSE0000367275476904067690557

Expression profiles

Bgee: expression breadth ubiquitous, 147 present calls, max score 95.26.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 6.6674 / max 945.2110, expressed in 140 samples.

FANTOM5 promoters (14 alternative TSS)

Promoter IDTPM avgSamples expressed
1788824.022974
1788701.090581
1788791.031046
1788690.119831
1788710.091315
1788760.077216
1788740.076812
1788800.054819
1788730.028711
1788780.02248

Top tissues by expression

282 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047395.26gold quality
granulocyteCL:000009492.62gold quality
spleenUBERON:000210690.11gold quality
lymph nodeUBERON:000002987.91gold quality
vermiform appendixUBERON:000115481.06gold quality
frontal poleUBERON:000279579.65gold quality
bloodUBERON:000017879.03gold quality
paraflocculusUBERON:000535178.41gold quality
middle frontal gyrusUBERON:000270277.41gold quality
caecumUBERON:000115377.21gold quality
leukocyteCL:000073876.34gold quality
hair follicleUBERON:000207376.15gold quality
buccal mucosa cellCL:000233676.07gold quality
monocyteCL:000057675.04gold quality
mononuclear cellCL:000084274.94gold quality
mucosa of transverse colonUBERON:000499172.76gold quality
endometrium epitheliumUBERON:000481170.46gold quality
small intestine Peyer’s patchUBERON:000345470.34gold quality
Brodmann (1909) area 10UBERON:001354170.34gold quality
bone marrow cellCL:000209269.56gold quality
tonsilUBERON:000237269.21gold quality
tongue squamous epitheliumUBERON:000691968.94gold quality
superficial temporal arteryUBERON:000161468.32silver quality
small intestineUBERON:000210868.18gold quality
diaphragmUBERON:000110367.88gold quality
bone marrowUBERON:000237167.48gold quality
epithelial cell of pancreasCL:000008366.70gold quality
epithelium of nasopharynxUBERON:000195166.67gold quality
cerebellar vermisUBERON:000472065.83gold quality
rectumUBERON:000105265.73gold quality

Single-cell (SCXA)

Detected in 6 experiment(s), a significant marker in 5.

ExperimentMarker?Max mean expression
E-HCAD-4yes132.74
E-CURD-122yes103.78
E-HCAD-1yes98.11
E-CURD-88yes53.32
E-ANND-3yes13.57
E-CURD-77no606.48

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): BCL6, EGR1, IRF4, NFATC3, NFKB2, NOTCH2, PAX5, PRDM1, RBPJ, REL, SPI1, SPIB, SPIC, STAT6, TCF3

miRNA regulators (miRDB)

39 targeting FCER2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-4425100.0067.591049
HSA-MIR-6772-5P99.9467.01577
HSA-MIR-6857-5P99.8765.32985
HSA-MIR-430699.7270.503630
HSA-MIR-516B-5P99.5666.331495
HSA-MIR-6751-5P99.5664.991145
HSA-MIR-314799.5266.34388
HSA-MIR-185-5P99.3568.602497
HSA-MIR-464499.3569.122514
HSA-MIR-6803-5P99.1963.901026
HSA-MIR-6852-5P99.1766.692073
HSA-MIR-478499.1567.411733
HSA-MIR-7160-5P99.1167.172207
HSA-MIR-465199.0667.572002
HSA-MIR-452-3P99.0166.251241
HSA-MIR-60898.9367.832013
HSA-MIR-3150B-3P98.8167.211728
HSA-MIR-557298.5565.84970
HSA-MIR-6804-5P98.3965.771084
HSA-MIR-317998.2265.901445
HSA-MIR-4664-5P98.1765.071020
HSA-MIR-4691-3P98.1166.831204
HSA-MIR-6819-5P97.9666.591071
HSA-MIR-6737-5P97.7566.541044
HSA-MIR-6812-5P97.5665.391059
HSA-MIR-3189-5P97.5566.71655
HSA-MIR-6855-5P97.5166.03830
HSA-MIR-3157-5P97.4167.61998
HSA-MIR-342-5P97.2564.10817
HSA-MIR-191397.0766.201417

Literature-anchored findings (GeneRIF, showing 40)

  • cd23 negativity is rare in typical b-cell CLL; negativity in patients with CD19+/CD5+ is suggestive of mantle cell leukemia (PMID:11920534)
  • prognostic significance of soluble CD23 in advanced stages of B-chronic lymphocytic leukemia and its role as an indicator for aggressive or indolent courses of disease. (PMID:12002758)
  • a review on the domains and functions of the cd23 receptor (PMID:12022472)
  • upstream regions of the CD23a and CD23b isoform coding sequences show distinct sensitivities to agents which induce CD23 protein expression at the plasma membrane (PMID:12070780)
  • Investigation of several stimulators to promote CD23a expression on CLL vs. normal B-cells confirmed a different CD23 regulation in B-CLL. CD23a is always predominantly expressed (constant ratio of CD23a:CD23b). (PMID:12127553)
  • CD23 expression in chronic lymphocytic leukemia was 53.9 times higher than in mantle-cell llymphoma. (PMID:12127555)
  • At term, the percentage of CD21(+) and CD23(+) B cells was comparable to the adult (PMID:12149502)
  • promoter is a target for NF-AT transcription factors in B-CLL cells (PMID:12379312)
  • The data show that monocyte-derived DC express the P2X7 receptor whose activation opens a cation-selective channel, and which leads to rapid and near complete shedding of CD23. (PMID:12456589)
  • Expression of this antigen may identify prognostically favorable subgroups of diffuse large B-cell lymphoma. (PMID:12576441)
  • Pax-5 is a key regulator of the B-cell-restricted expression of the CD23a isoform. (PMID:12731041)
  • ADAM8, ADAM15, and MDC-L, but not ADAM17, catalyzed ectodomain shedding of CD23, the low affinity IgE receptor. (PMID:12777399)
  • role of the CD23/nitric oxide pathway in the control of the cytoadherence of Plasmodium falciparum parasitized red blood cells on endothelial cells (PMID:15272865)
  • Data show that gamma-irradiation not only induced CD23 expression, but also augmented the interleukin-4-induced surface CD23 levels. (PMID:15469741)
  • Downregulation of CD23 antigens activity are early steps in PI-induced apoptosis of B-cell chronic lymphocytic leukemia lymphocytes and may be part of the full apoptotic response. (PMID:15565166)
  • Results suggest that CD23 should be included in the panel of antibodies currently used to characterize mediastinal large B-cell lymphomas. (PMID:15569053)
  • review of mechanisms leading to the upregulation of CD23 in the leukemic cells and review of the potential functions of CD23 as well as its regulation by Notch2 in B-CLL (PMID:15621797)
  • CD21 and CD23a are common targets for B lymphotropic gammaherpesviruses. (PMID:15795251)
  • In humans, in contrast to what was previously found in mice, intestinal cells coexpress CD23a and CD23b, and the two splice forms show different localizations in polarized cells. (PMID:15843555)
  • Retinoic acid inhibits CD40 plus IL-4 mediated IgE production through alterations of sCD23, sCD54 and IL-6 production (PMID:15883744)
  • marked inhibition of cell cluster formation and proliferation is achieved by antibody treatment against the CD23 mature B cell surface marker expressed in LCL41 cells (PMID:16009564)
  • Results describe the production of a recombinant form of human soluble CD23 with similar proinflammatory properties as the native protein. (PMID:16083870)
  • CD23 encodes a functional IgE receptor on human intestinal epithelial cells and this epithelial receptor is likely to play an important role in food allergies. (PMID:16143132)
  • CD23 is involved in both up- and down-regulation of IgE; CD23 can bind both its ligands, IgE and CD21, simultaneously. (PMID:16172256)
  • The high-resolution crystal structures of the human CD23 lectin domain in the presence and absence of Ca2+ was solved. (PMID:16765898)
  • CD23a is expressed normally on human IECs, and in the presence of IgE can function as an antigen-sampling mechanism capable of activating subepithelial mast cells. (PMID:16831589)
  • low levels of c-Rel are the underlying cause of aberrant CD23 expression in non-X-linked hyper-IgM syndrome B cells (PMID:16896156)
  • Our results indicate that CD23 expression in these human intestinal epithelial cells is mediated through the p38 MAPK pathway. (PMID:16899715)
  • R62W influences the stability of membrane CD23 molecules due to possibly diminished N-glycosylation. (PMID:17301828)
  • There is an unexpectedly high frequency of CD23 expression in follicular lymphomas in general, which is even more pronounced in inguinal nodes. (PMID:17493235)
  • The interaction between alphavbeta5 and sCD23 indicates that integrins deliver to cells important signals initiated by soluble ligands without the requirement for interactions with RGD motifs in their common ligands. (PMID:17540777)
  • the CD23 monomers inhibit and the oligomer stimulates IgE synthesis in human B cells after heavy chain switching to IgE (PMID:17576766)
  • Transgenic CD23 enhances antibody and T-cell responses to IgE-complexed antigen, while it negatively regulates the total antibody response to a variety of antigens. (PMID:17635803)
  • lumiliximab may be an effective treatment alone or in combination with rituximab or chemotherapy agents in chronic lymphocytic leukemia or other CD23-overexpressing B-cell malignancies (PMID:18032710)
  • correlation of CD23 expression in B-chronic lymphocytic leukaemia & clinical parameters; CD23 expression is significantly decreased in patients with extremely high lymphocyte counts (PBL counts of >100 x 10(9)/l) & in the advanced stages of disease (PMID:18183502)
  • The distinct punctate CD23 staining for Merkel cell carcinoma may be helpful in differentiating it from small cell carcinoma. (PMID:18616759)
  • higher expression levels in adenoid tissue of children with house dust mite allergies (PMID:18657051)
  • CD23 is a useful marker in distinguishing mediastinal diffuse large B-cell lymphoma and classical Hodgkin lymphoma in mediastinal biopsies. (PMID:19223373)
  • The absolute number of B lymphocytes and the percentage of naive cells (CD23-/CD27-) decreased with age whereas there was an increase in memory cells (CD27+). (PMID:19290077)
  • MyD88-dependent Toll-like receptor (TLR)4 agonists may enhance allergic responses by inducing the production of both CD23 and MMP9, resulting in increased cleavage of membrane CD23 and soluble CD23 accumulation. (PMID:19635918)

Cross-species orthologs

22 orthologs

OrganismSymbolGene ID
danio_rerioasgr1c.2ENSDARG00000046092
danio_rerioasgrl1ENSDARG00000046142
danio_reriosi:dkey-61f9.1ENSDARG00000070414
danio_rerioasgr1aENSDARG00000095963
danio_reriosi:cabz01007816.2ENSDARG00000102537
danio_rerioasgr1bENSDARG00000103480
danio_reriosi:ch211-283g2.5ENSDARG00000108953
danio_rerioENSDARG00000111755
danio_rerioENSDARG00000112842
mus_musculusFcer2aENSMUSG00000005540
rattus_norvegicusFcer2ENSRNOG00000001005
drosophila_melanogastertfcFBGN0035199
drosophila_melanogasterCG14866FBGN0038315
drosophila_melanogasterlectin-46CbFBGN0040092
drosophila_melanogasterlectin-46CaFBGN0040093
drosophila_melanogasterlectin-33AFBGN0040096
drosophila_melanogasterCG34033FBGN0054033
caenorhabditis_elegansclec-87WBGENE00007709
caenorhabditis_elegansclec-91WBGENE00014117
caenorhabditis_elegansWBGENE00016088
caenorhabditis_elegansWBGENE00018692
caenorhabditis_elegansWBGENE00019606

Paralogs (14): CD209 (ENSG00000090659), CLEC4M (ENSG00000104938), CLEC4A (ENSG00000111729), CD207 (ENSG00000116031), CLEC10A (ENSG00000132514), ASGR1 (ENSG00000141505), CLEC4F (ENSG00000152672), ASGR2 (ENSG00000161944), CLEC4E (ENSG00000166523), CLEC4D (ENSG00000166527), CLEC4G (ENSG00000182566), CLEC17A (ENSG00000187912), CLEC4C (ENSG00000198178), CLEC6A (ENSG00000205846)

Protein

Protein identifiers

Low affinity immunoglobulin epsilon Fc receptorP06734 (reviewed: P06734)

Alternative names: BLAST-2, C-type lectin domain family 4 member J, Fc-epsilon-RII, Immunoglobulin E-binding factor, Lymphocyte IgE receptor

All UniProt accessions (3): P06734, K3W4U1, M0R1R5

UniProt curated annotations — full annotation on UniProt →

Function. Low-affinity receptor for immunoglobulin E (IgE) and CR2/CD21. Has essential roles in the regulation of IgE production and in the differentiation of B cells. On B cells, initiates IgE-dependent antigen uptake and presentation to T cells. On macrophages, upon IgE binding and antigen cross-linking induces intracellular killing of parasites through activation of L-Arginine-nitric oxide pathway.

Subunit / interactions. Homotrimer. Interacts (via C-type lectin domain) with IGHE (via CH3 region); this interaction regulates IgE homeostasis. Interacts (via the C-terminus) with CR2/CD21 (via Sushi domain 1 and 2).

Subcellular location. Cell membrane. Secreted.

Tissue specificity. Detected in urine (at protein level).

Post-translational modifications. N- and O-glycosylated. The secreted form sCD23 is produced by ADAM10-mediated ectodomain shedding.

Miscellaneous. There are two kinds of Fc receptors for IgE, which differ in both structure and function: high affinity receptors on basophils and mast cells and low affinity receptors on lymphocytes and monocytes.

RefSeq proteins (3): NP_001193948, NP_001207429, NP_001993 (=MANE)

Domains & families (InterPro)

IDNameType
IPR001304C-type_lectin-likeDomain
IPR016186C-type_lectin-like/link_sfHomologous_superfamily
IPR016187CTDL_foldHomologous_superfamily
IPR018378C-type_lectin_CSConserved_site
IPR033989CD209-like_CTLDDomain
IPR050111C-type_lectin/snaclec_domainFamily

Pfam: PF00059

UniProt features (47 total): strand 14, binding site 4, disulfide bond 4, sequence variant 3, turn 3, repeat 3, chain 2, region of interest 2, lipid moiety-binding region 2, glycosylation site 2, topological domain 2, helix 2, site 1, sequence conflict 1, transmembrane region 1, domain 1

Structure

Experimental structures (PDB)

23 structures.

PDBMethodResolution (Å)
2H2TX-RAY DIFFRACTION1.3
2H2RX-RAY DIFFRACTION1.5
6Y0MX-RAY DIFFRACTION1.5
6Y0LX-RAY DIFFRACTION1.65
4J6JX-RAY DIFFRACTION1.9
4J6PX-RAY DIFFRACTION1.9
4GJ0X-RAY DIFFRACTION1.95
4G9AX-RAY DIFFRACTION2
4GK1X-RAY DIFFRACTION2.24
4G96X-RAY DIFFRACTION2.25
4GI0X-RAY DIFFRACTION2.27
4J6KX-RAY DIFFRACTION2.3
4J6MX-RAY DIFFRACTION2.48
4J6QX-RAY DIFFRACTION2.54
4GJXX-RAY DIFFRACTION2.8
4J6NX-RAY DIFFRACTION2.85
4EZMX-RAY DIFFRACTION3.1
4J6LX-RAY DIFFRACTION3.15
4KI1X-RAY DIFFRACTION3.2
4GKOX-RAY DIFFRACTION3.3
5LGKX-RAY DIFFRACTION3.5
1T8CSOLUTION NMR
1T8DSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P06734-F186.760.70

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 149–150 (cleavage)

Ligand- & substrate-binding residues (4): 249; 251; 269; 270

Post-translational modifications (2): 17, 18

Disulfide bonds (4): 160–288, 163–174, 191–282, 259–273

Glycosylation sites (2): 63, 296

Function

Pathways and Gene Ontology

Reactome pathways

3 pathways

IDPathway
R-HSA-2197563NOTCH2 intracellular domain regulates transcription
R-HSA-6783783Interleukin-10 signaling
R-HSA-6785807Interleukin-4 and Interleukin-13 signaling

MSigDB gene sets: 262 (showing top): REACTOME_SIGNALING_BY_NOTCH, LU_IL4_SIGNALING, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, MODULE_64, GOCC_CELL_SURFACE, MODULE_478, CROONQUIST_NRAS_SIGNALING_UP, GOBP_VESICLE_MEDIATED_TRANSPORT, GOBP_LEUKOCYTE_MEDIATED_IMMUNITY, GOBP_B_CELL_MEDIATED_IMMUNITY, GOBP_REGULATION_OF_IMMUNE_RESPONSE, GOBP_LYMPHOCYTE_MEDIATED_IMMUNITY, GOBP_FC_EPSILON_RECEPTOR_SIGNALING_PATHWAY, GOBP_MYELOID_LEUKOCYTE_ACTIVATION, GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION

GO Biological Process (9): B cell antigen processing and presentation (GO:0002450), positive regulation of humoral immune response mediated by circulating immunoglobulin (GO:0002925), immune response (GO:0006955), positive regulation of gene expression (GO:0010628), Fc-gamma receptor signaling pathway involved in phagocytosis (GO:0038096), macrophage activation (GO:0042116), defense response to bacterium (GO:0042742), Fc receptor-mediated immune complex endocytosis (GO:0160006), Fc-epsilon receptor signaling pathway (GO:0038095)

GO Molecular Function (8): protease binding (GO:0002020), integrin binding (GO:0005178), low-affinity IgE receptor activity (GO:0019769), IgE binding (GO:0019863), carbohydrate binding (GO:0030246), pattern recognition receptor activity (GO:0038187), metal ion binding (GO:0046872), protein binding (GO:0005515)

GO Cellular Component (5): plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), extracellular exosome (GO:0070062), extracellular region (GO:0005576), membrane (GO:0016020)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Signaling by Interleukins2
Signaling by NOTCH21

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
binding2
cellular anatomical structure2
B cell mediated immunity1
antigen processing and presentation1
humoral immune response mediated by circulating immunoglobulin1
positive regulation of immunoglobulin mediated immune response1
positive regulation of humoral immune response1
regulation of humoral immune response mediated by circulating immunoglobulin1
immune system process1
response to stimulus1
gene expression1
regulation of gene expression1
positive regulation of macromolecule biosynthetic process1
Fc receptor mediated stimulatory signaling pathway1
phagocytosis1
Fc-gamma receptor signaling pathway1
myeloid leukocyte activation1
defense response1
response to bacterium1
receptor-mediated endocytosis1
Fc receptor signaling pathway1
enzyme binding1
signaling receptor binding1
protein-containing complex binding1
cell adhesion molecule binding1
IgE receptor activity1
immunoglobulin binding1
signaling receptor activity1
cation binding1
membrane1
cell periphery1
plasma membrane1
cell surface1
side of membrane1
extracellular vesicle1

Protein interactions and networks

STRING

1092 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
FCER2CR2P20023936
FCER2FCGR1AP12314674
FCER2RBMS1P29558640
FCER2FCGR3AP08637615
FCER2PAX5Q02548615
FCER2FCGR3BO75015601
FCER2IL4P05112593
FCER2ADAM10O14672551
FCER2CXCL16Q9H2A7549
FCER2PDCLQ13371542
FCER2GLCCI1Q86VQ1540
FCER2FCARP24071511
FCER2CD5P06127507
FCER2EFNA2O43921497
FCER2NOTCH2Q04721490

IntAct

10 interactions, top by confidence:

ABTypeScore
FCER2CDH2psi-mi:“MI:0407”(direct interaction)0.600
CDH2FCER2psi-mi:“MI:0403”(colocalization)0.600
FCER2ATF7psi-mi:“MI:0915”(physical association)0.560
FGFR2FCER2psi-mi:“MI:0407”(direct interaction)0.560
FCER2FGFR2psi-mi:“MI:0407”(direct interaction)0.560
CR2FCER2psi-mi:“MI:0407”(direct interaction)0.440

BioGRID (9): ATF7 (Two-hybrid), FCER2 (Reconstituted Complex), XRCC6 (Reconstituted Complex), FCER2 (Affinity Capture-Western), RNF144B (Affinity Capture-Western), NOTCH2 (Affinity Capture-Western), FCER2 (Affinity Capture-Western), FCER2 (Affinity Capture-RNA), FCER2 (Affinity Capture-RNA)

ESM2 similar proteins: A3FM55, A7X401, A7X406, A7X409, A7X413, B0VXV0, B0VXV1, B4XSY7, B4XSY8, B4XSZ1, B4XT08, C0HKZ6, D3ZWT9, I7JUQ0, J3RY43, J3S3U6, J3SBN9, P02707, P06734, P0DJL4, P14371, P17346, P20693, P25031, P81017, P81116, Q38L02, Q4PRD2, Q64335, Q67EQ0, Q67EQ1, Q696W1, Q69FH1, Q6EIG7, Q6T7B5, Q71RQ9, Q7LZK5, Q7T2Q0, Q7T2Q1, Q8CJ91

Diamond homologs: A0ZT93, B0VXV2, B4XT08, B5U6Y6, B5U6Y7, C0HKZ7, O60449, P05140, P06027, P06734, P0DJL5, P10716, P13611, P14371, P20693, P34472, P55066, P55067, P81018, P81282, P81996, Q01758, Q02988, Q26627, Q28062, Q28670, Q28858, Q4PRD0, Q4TU93, Q4V885, Q61830, Q62059, Q64449, Q66S03, Q6X5S2, Q6X5S3, Q6X5S5, Q6X5S6, Q6X5S7, Q6X5S8

SIGNOR signaling

4 interactions.

AEffectBMechanism
PRDM1“down-regulates quantity by repression”FCER2“transcriptional regulation”
BCL6“down-regulates quantity by repression”FCER2“transcriptional regulation”
IRF4“up-regulates quantity by expression”FCER2“transcriptional regulation”
EGR1“down-regulates quantity by repression”FCER2“transcriptional regulation”

Disease & clinical

Clinical variants and AI predictions

ClinVar

64 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance50
Likely benign7
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

1391 predictions. Top by Δscore:

VariantEffectΔscore
19:7689426:AGTTG:Aacceptor_gain1.0000
19:7689427:GTTG:Gacceptor_gain1.0000
19:7689428:TTG:Tacceptor_gain1.0000
19:7689429:TG:Tacceptor_gain1.0000
19:7689431:C:CCacceptor_gain1.0000
19:7690153:CCTCA:Cdonor_loss1.0000
19:7690154:CTCAC:Cdonor_loss1.0000
19:7690155:TCAC:Tdonor_loss1.0000
19:7690156:CA:Cdonor_loss1.0000
19:7690264:TC:Tacceptor_gain1.0000
19:7690265:CC:Cacceptor_gain1.0000
19:7690265:CCTGG:Cacceptor_loss1.0000
19:7690266:C:CCacceptor_gain1.0000
19:7690512:C:CTacceptor_gain1.0000
19:7696816:CACA:Cdonor_gain1.0000
19:7696824:CCG:Cdonor_gain1.0000
19:7696916:T:Cacceptor_gain1.0000
19:7697234:AC:Adonor_gain1.0000
19:7697235:CC:Cdonor_gain1.0000
19:7697299:C:CCacceptor_gain1.0000
19:7697303:T:TCacceptor_gain1.0000
19:7702013:A:ACdonor_gain1.0000
19:7702014:C:CCdonor_gain1.0000
19:7702014:CT:Cdonor_gain1.0000
19:7702014:CTCA:Cdonor_gain1.0000
19:7702017:A:ACdonor_gain1.0000
19:7702018:C:CCdonor_gain1.0000
19:7689424:CCAGT:Cacceptor_gain0.9900
19:7689425:CAGT:Cacceptor_gain0.9900
19:7689428:T:Cacceptor_gain0.9900

AlphaMissense

2109 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
19:7689355:C:AW268C0.999
19:7689355:C:GW268C0.999
19:7689424:C:AW245C0.999
19:7689424:C:GW245C0.999
19:7690227:C:AW220C0.998
19:7690227:C:GW220C0.998
19:7690475:C:AW184C0.998
19:7690475:C:GW184C0.998
19:7690185:C:AW234C0.997
19:7690185:C:GW234C0.997
19:7690526:C:AW167C0.997
19:7690526:C:GW167C0.997
19:7689357:A:GW268R0.996
19:7689357:A:TW268R0.996
19:7690455:C:TC191Y0.995
19:7689319:C:AW280C0.994
19:7689319:C:GW280C0.994
19:7690455:C:GC191S0.992
19:7690456:A:TC191S0.992
19:7690506:C:GC174S0.992
19:7690507:A:TC174S0.992
19:7689356:C:GW268S0.991
19:7690229:A:GW220R0.991
19:7690229:A:TW220R0.991
19:7690260:G:CF209L0.991
19:7690260:G:TF209L0.991
19:7690261:A:CF209C0.991
19:7690262:A:GF209L0.991
19:7690454:A:CC191W0.991
19:7689314:C:GC282S0.990

dbSNP variants (sampled 300 via entrez): RS1000025918 (19:7700671 T>A,C), RS1000285709 (19:7703464 T>C), RS1000451044 (19:7703889 C>A), RS1000481356 (19:7698611 A>G,T), RS1000558528 (19:7696659 C>G), RS1000608019 (19:7700260 A>AGTTTTCCCCTCT), RS1000623508 (19:7701897 C>T), RS1000675696 (19:7694012 G>A), RS1000746650 (19:7692126 G>A,T), RS1001046174 (19:7693719 G>A,T), RS1001079797 (19:7701713 T>C), RS1001196356 (19:7688526 T>C,G), RS1001558559 (19:7697871 A>C), RS1001783718 (19:7693102 A>G), RS1002181926 (19:7699885 AT>A)

Disease associations

OMIM: gene MIM:151445 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

2 associations (top):

StudyTraitp-value
GCST003262_344Post bronchodilator FEV12.000000e-06
GCST006585_918Blood protein levels2.000000e-25

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0004314forced expiratory volume

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2940 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 21,247 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL279786BATIMASTAT221,247

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

1 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs28364072FCER20.000

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: catalytic receptor — Fc epsilon receptors

Most potent curated ligand interactions (1 total), top 1:

LigandActionAffinityParameter
IgE heavy chainBinding7.0pKd

ChEMBL bioactivities

63 potent at pChembl≥5 of 65 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
7.92IC5012nMCHEMBL115348
7.89IC5013nMCHEMBL118054
7.80IC5016nMCHEMBL324564
7.70IC5020nMCHEMBL115326
7.70IC5020nMCHEMBL323228
7.70IC5020nMCHEMBL432583
7.70IC5020nMCHEMBL322050
7.52IC5030nMCHEMBL424251
7.52IC5030nMCHEMBL115211
7.40IC5040nMCHEMBL114657
7.40IC5040nMCHEMBL114427
7.30IC5050nMCHEMBL320799
7.22IC5060nMCHEMBL326148
7.16IC5070nMCHEMBL2112477
7.16IC5070nMCHEMBL2111687
7.10IC5080nMCHEMBL116506
7.10IC5080nMCHEMBL110713
7.00IC50100nMCHEMBL116435
7.00IC50100nMCHEMBL324205
7.00IC50100nMCHEMBL316550
7.00IC50100nMBATIMASTAT
7.00IC50100nMCHEMBL115046
7.00IC50100nMCHEMBL326555
7.00IC50100nMCHEMBL320798
7.00IC50100nMCHEMBL110546
7.00EC50100nMCHEMBL318079
6.96EC50110nMCHEMBL104519
6.89IC50130nMCHEMBL326814
6.89IC50130nMCHEMBL324723
6.89IC50130nMCHEMBL114332
6.80IC50160nMCHEMBL113764
6.70IC50200nMCHEMBL420077
6.68IC50210nMCHEMBL325608
6.66IC50220nMCHEMBL108412
6.64IC50230nMCHEMBL108737
6.50EC50313nMCHEMBL104279
6.50IC50320nMCHEMBL110667
6.42IC50380nMCHEMBL433197
6.40IC50400nMCHEMBL322138
6.22IC50600nMCHEMBL108842
6.12IC50760nMCHEMBL106444
6.00IC501000nMCHEMBL440712
6.00IC501000nMCHEMBL106233
6.00IC501000nMCHEMBL11306
6.00IC501000nMCHEMBL92762
5.85EC501400nMCHEMBL104333
5.80IC501600nMCHEMBL94368
5.72IC501900nMCHEMBL96654
5.71EC501940nMCHEMBL104691
5.52IC503000nMCHEMBL326985

PubChem BioAssay actives

63 with measured affinity, of 92 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
(2S,3R)-N-hydroxy-2-[[(2E)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0120uM
methyl 2-[(2S,3R)-3-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]carbamoyl]-2-(hydroxycarbamoyl)-5-methylhexyl]sulfanylacetate44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0130uM
(2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(phenacylsulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0160uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-(1-benzothiophen-2-ylmethyl)-N’,3-dihydroxybutanediamide91698: Inhibitory activity against IgE receptoric500.0200uM
(2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric500.0200uM
(2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(quinolin-3-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric500.0200uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(phenacylsulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0200uM
(2S,3R)-2-(benzylsulfanylmethyl)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide44538: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 30-100ic500.0300uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(thiophen-2-ylsulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0300uM
(2S,3R)-N-hydroxy-2-[(4-hydroxyphenyl)sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide44539: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 40-80ic500.0400uM
(2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(phenylsulfanylmethyl)butanediamide44539: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 40-80ic500.0400uM
methyl 4-[(2S,3R)-2-(hydroxycarbamoyl)-5-methyl-3-[[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]carbamoyl]hexyl]sulfanylbenzoate44670: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 50-150ic500.0500uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-3-[[(2E)-2-(4-chlorophenyl)-2-hydroxyiminoethyl]sulfanylmethyl]-N’-hydroxy-2-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0600uM
(3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-[[(2S)-1,2,3,4-tetrahydronaphthalen-2-yl]methyl]butanediamide91698: Inhibitory activity against IgE receptoric500.0700uM
(3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-[[(2R)-1,2,3,4-tetrahydronaphthalen-2-yl]methyl]butanediamide91698: Inhibitory activity against IgE receptoric500.0700uM
(2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-2-[(7-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide91698: Inhibitory activity against IgE receptoric500.0800uM
(2S,3R)-N-hydroxy-2-[[(2E)-2-methoxyimino-2-phenylethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.0800uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-[(7-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide91698: Inhibitory activity against IgE receptoric500.1000uM
(2S,3R)-3-(1-benzofuran-2-ylmethyl)-N,2-dihydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]butanediamide91698: Inhibitory activity against IgE receptoric500.1000uM
(2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-[(4-nitrophenyl)sulfanylmethyl]butanediamide44534: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-300ic500.1000uM
methyl 2-[(2S,3R)-2-(hydroxycarbamoyl)-5-methyl-3-[[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]carbamoyl]hexyl]sulfanylbenzoate44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1000uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-3-[[(2E)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]-2-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1000uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-[[(2Z)-2-methoxyimino-2-phenylethyl]sulfanylmethyl]butanediamide44534: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-300ic500.1000uM
(2R,3S)-3-[(2-amino-2-oxoethyl)sulfanylmethyl]-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide44533: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-200ic500.1000uM
(2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(thiophen-2-ylsulfanylmethyl)butanediamide44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line)ic500.1000uM
(3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-N-methyl-2-oxo-1H-indole-5-carboxamide166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releaseec500.1000uM
(3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-N-methyl-2-oxo-1H-indole-5-sulfonamide166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releaseec500.1100uM
(2S,3R)-N-hydroxy-2-[[(2E)-2-hydroxyimino-2-(4-phenylphenyl)ethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1300uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(sulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1300uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-[[(2Z)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1300uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-(thiophen-2-ylsulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.1600uM
(2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-2-(cyclopentylmethyl)-N’-hydroxybutanediamide44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line)ic500.2000uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-(phenacylsulfanylmethyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.2100uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-[(6-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide91698: Inhibitory activity against IgE receptoric500.2200uM
(2R,3S)-N-[(2S)-3,3-dimethyl-1-(methylamino)-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric500.2300uM
(3Z)-3-[(1-methylindol-3-yl)methylidene]-2-oxo-1H-indole-5-sulfonamide166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releaseec500.3130uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-(1,3-benzothiazol-2-ylmethyl)-N’,3-dihydroxybutanediamide91698: Inhibitory activity against IgE receptoric500.3200uM
(2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-[[2-oxo-2-(4-phenylphenyl)ethyl]sulfanylmethyl]butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic500.3800uM
(2S,3R)-N,2-dihydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(naphthalen-2-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric500.4000uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric500.6000uM
(2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’,3-dihydroxy-2-[(7-hydroxynaphthalen-2-yl)methyl]butanediamide91698: Inhibitory activity against IgE receptoric500.7600uM
(2R)-N’-hydroxy-N-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-2-(2-methylpropyl)butanediamide44536: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 1000-4000ic501.0000uM
(2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(naphthalen-2-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric501.0000uM
(2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(quinolin-6-ylmethyl)butanediamide91698: Inhibitory activity against IgE receptoric501.0000uM
S-[(2S,3R)-3-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]carbamoyl]-2-(hydroxycarbamoyl)-5-methylhexyl] ethanethioate44535: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 1000-3000ic501.0000uM
(3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-2-oxo-1H-indole-5-sulfonamide166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releaseec501.4000uM
(2S)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-phenylbutanediamide44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line)ic501.6000uM
(2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line)ic501.9000uM
2-[[(3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-2-oxo-1H-indol-5-yl]sulfonylamino]acetic acid166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releaseec501.9400uM
(2R)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cellsic503.0000uM

CTD chemical–gene interactions

20 total (human), top 20 by PubMed support.

ChemicalActions (top 5)PubMed papers
Benzo(a)pyreneincreases mutagenesis, affects methylation2
pimagedinedecreases reaction, increases expression1
perfluorooctanoic acidincreases expression1
ethinyl estradiol-desogestrel combinationincreases expression1
2,2’,4,4’-tetrabromodiphenyl etherincreases expression1
Decitabineaffects expression1
Acetaminophendecreases expression1
Arsenicdecreases methylation1
Cadmiumincreases abundance, increases expression1
Cisplatinaffects expression1
Ethyl Methanesulfonatedecreases expression1
Formaldehydedecreases expression1
Leaddecreases expression1
Methyl Methanesulfonatedecreases expression1
Methylprednisoloneaffects binding, decreases reaction, increases reaction, increases expression1
Nitritesaffects chemical synthesis1
Tretinoinincreases expression1
Methacholine Chlorideincreases expression1
Cadmium Chlorideincreases expression, increases abundance1
Particulate Matterincreases expression, increases reaction1

ChEMBL screening assays

14 unique, capped per target: 13 binding, 1 functional

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL651875BindingTested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 50-150Selective inhibition of low affinity IgE receptor (CD23) processing. — Bioorg Med Chem Lett
CHEMBL769865FunctionalEffect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT releasePotent small molecule inhibitors of spleen tyrosine kinase (Syk). — Bioorg Med Chem Lett

Cellosaurus cell lines

4 cell lines: 4 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B1S1Abcam HeLa FCER2 KOCancer cell lineFemale
CVCL_B8FVAbcam HCT 116 FCER2 KOCancer cell lineMale
CVCL_B8VPAbcam MCF-7 FCER2 KOCancer cell lineFemale
CVCL_B9I2Abcam A-549 FCER2 KOCancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.