FCER2
gene geneOn this page
Also known as CLEC4JCD23FCErIIFcepsilonRII
Summary
FCER2 (Fc epsilon receptor II, HGNC:3612) is a protein-coding gene on chromosome 19p13.2, encoding Low affinity immunoglobulin epsilon Fc receptor (P06734). Low-affinity receptor for immunoglobulin E (IgE) and CR2/CD21.
The protein encoded by this gene is a B-cell specific antigen, and a low-affinity receptor for IgE. It has essential roles in B cell growth and differentiation, and the regulation of IgE production. This protein also exists as a soluble secreted form, then functioning as a potent mitogenic growth factor. Alternatively spliced transcript variants encoding different isoforms have been described for this gene.
Source: NCBI Gene 2208 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 64 total
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001220500
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3612 |
| Approved symbol | FCER2 |
| Name | Fc epsilon receptor II |
| Location | 19p13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CLEC4J, CD23, FCErII, FcepsilonRII |
| Ensembl gene | ENSG00000104921 |
| Ensembl biotype | protein_coding |
| OMIM | 151445 |
| Entrez | 2208 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 4 protein_coding, 3 retained_intron
ENST00000346664, ENST00000360067, ENST00000593418, ENST00000597312, ENST00000597921, ENST00000597934, ENST00000598803
RefSeq mRNA: 3 — MANE Select: NM_001220500
NM_001207019, NM_001220500, NM_002002
CCDS: CCDS12184
Canonical transcript exons
ENST00000597921 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002978935 | 7702015 | 7702131 |
| ENSE00003182652 | 7688776 | 7689430 |
| ENSE00003487649 | 7696825 | 7696914 |
| ENSE00003515231 | 7697013 | 7697075 |
| ENSE00003529945 | 7699739 | 7699845 |
| ENSE00003537804 | 7698741 | 7698854 |
| ENSE00003584257 | 7698356 | 7698409 |
| ENSE00003609356 | 7697236 | 7697298 |
| ENSE00003622475 | 7697527 | 7697589 |
| ENSE00003628227 | 7690159 | 7690265 |
| ENSE00003672754 | 7690406 | 7690557 |
Expression profiles
Bgee: expression breadth ubiquitous, 147 present calls, max score 95.26.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 6.6674 / max 945.2110, expressed in 140 samples.
FANTOM5 promoters (14 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 178882 | 4.0229 | 74 |
| 178870 | 1.0905 | 81 |
| 178879 | 1.0310 | 46 |
| 178869 | 0.1198 | 31 |
| 178871 | 0.0913 | 15 |
| 178876 | 0.0772 | 16 |
| 178874 | 0.0768 | 12 |
| 178880 | 0.0548 | 19 |
| 178873 | 0.0287 | 11 |
| 178878 | 0.0224 | 8 |
Top tissues by expression
282 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 95.26 | gold quality |
| granulocyte | CL:0000094 | 92.62 | gold quality |
| spleen | UBERON:0002106 | 90.11 | gold quality |
| lymph node | UBERON:0000029 | 87.91 | gold quality |
| vermiform appendix | UBERON:0001154 | 81.06 | gold quality |
| frontal pole | UBERON:0002795 | 79.65 | gold quality |
| blood | UBERON:0000178 | 79.03 | gold quality |
| paraflocculus | UBERON:0005351 | 78.41 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 77.41 | gold quality |
| caecum | UBERON:0001153 | 77.21 | gold quality |
| leukocyte | CL:0000738 | 76.34 | gold quality |
| hair follicle | UBERON:0002073 | 76.15 | gold quality |
| buccal mucosa cell | CL:0002336 | 76.07 | gold quality |
| monocyte | CL:0000576 | 75.04 | gold quality |
| mononuclear cell | CL:0000842 | 74.94 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 72.76 | gold quality |
| endometrium epithelium | UBERON:0004811 | 70.46 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 70.34 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 70.34 | gold quality |
| bone marrow cell | CL:0002092 | 69.56 | gold quality |
| tonsil | UBERON:0002372 | 69.21 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 68.94 | gold quality |
| superficial temporal artery | UBERON:0001614 | 68.32 | silver quality |
| small intestine | UBERON:0002108 | 68.18 | gold quality |
| diaphragm | UBERON:0001103 | 67.88 | gold quality |
| bone marrow | UBERON:0002371 | 67.48 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 66.70 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 66.67 | gold quality |
| cerebellar vermis | UBERON:0004720 | 65.83 | gold quality |
| rectum | UBERON:0001052 | 65.73 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-4 | yes | 132.74 |
| E-CURD-122 | yes | 103.78 |
| E-HCAD-1 | yes | 98.11 |
| E-CURD-88 | yes | 53.32 |
| E-ANND-3 | yes | 13.57 |
| E-CURD-77 | no | 606.48 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): BCL6, EGR1, IRF4, NFATC3, NFKB2, NOTCH2, PAX5, PRDM1, RBPJ, REL, SPI1, SPIB, SPIC, STAT6, TCF3
miRNA regulators (miRDB)
39 targeting FCER2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-6772-5P | 99.94 | 67.01 | 577 |
| HSA-MIR-6857-5P | 99.87 | 65.32 | 985 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-516B-5P | 99.56 | 66.33 | 1495 |
| HSA-MIR-6751-5P | 99.56 | 64.99 | 1145 |
| HSA-MIR-3147 | 99.52 | 66.34 | 388 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-4644 | 99.35 | 69.12 | 2514 |
| HSA-MIR-6803-5P | 99.19 | 63.90 | 1026 |
| HSA-MIR-6852-5P | 99.17 | 66.69 | 2073 |
| HSA-MIR-4784 | 99.15 | 67.41 | 1733 |
| HSA-MIR-7160-5P | 99.11 | 67.17 | 2207 |
| HSA-MIR-4651 | 99.06 | 67.57 | 2002 |
| HSA-MIR-452-3P | 99.01 | 66.25 | 1241 |
| HSA-MIR-608 | 98.93 | 67.83 | 2013 |
| HSA-MIR-3150B-3P | 98.81 | 67.21 | 1728 |
| HSA-MIR-5572 | 98.55 | 65.84 | 970 |
| HSA-MIR-6804-5P | 98.39 | 65.77 | 1084 |
| HSA-MIR-3179 | 98.22 | 65.90 | 1445 |
| HSA-MIR-4664-5P | 98.17 | 65.07 | 1020 |
| HSA-MIR-4691-3P | 98.11 | 66.83 | 1204 |
| HSA-MIR-6819-5P | 97.96 | 66.59 | 1071 |
| HSA-MIR-6737-5P | 97.75 | 66.54 | 1044 |
| HSA-MIR-6812-5P | 97.56 | 65.39 | 1059 |
| HSA-MIR-3189-5P | 97.55 | 66.71 | 655 |
| HSA-MIR-6855-5P | 97.51 | 66.03 | 830 |
| HSA-MIR-3157-5P | 97.41 | 67.61 | 998 |
| HSA-MIR-342-5P | 97.25 | 64.10 | 817 |
| HSA-MIR-1913 | 97.07 | 66.20 | 1417 |
Literature-anchored findings (GeneRIF, showing 40)
- cd23 negativity is rare in typical b-cell CLL; negativity in patients with CD19+/CD5+ is suggestive of mantle cell leukemia (PMID:11920534)
- prognostic significance of soluble CD23 in advanced stages of B-chronic lymphocytic leukemia and its role as an indicator for aggressive or indolent courses of disease. (PMID:12002758)
- a review on the domains and functions of the cd23 receptor (PMID:12022472)
- upstream regions of the CD23a and CD23b isoform coding sequences show distinct sensitivities to agents which induce CD23 protein expression at the plasma membrane (PMID:12070780)
- Investigation of several stimulators to promote CD23a expression on CLL vs. normal B-cells confirmed a different CD23 regulation in B-CLL. CD23a is always predominantly expressed (constant ratio of CD23a:CD23b). (PMID:12127553)
- CD23 expression in chronic lymphocytic leukemia was 53.9 times higher than in mantle-cell llymphoma. (PMID:12127555)
- At term, the percentage of CD21(+) and CD23(+) B cells was comparable to the adult (PMID:12149502)
- promoter is a target for NF-AT transcription factors in B-CLL cells (PMID:12379312)
- The data show that monocyte-derived DC express the P2X7 receptor whose activation opens a cation-selective channel, and which leads to rapid and near complete shedding of CD23. (PMID:12456589)
- Expression of this antigen may identify prognostically favorable subgroups of diffuse large B-cell lymphoma. (PMID:12576441)
- Pax-5 is a key regulator of the B-cell-restricted expression of the CD23a isoform. (PMID:12731041)
- ADAM8, ADAM15, and MDC-L, but not ADAM17, catalyzed ectodomain shedding of CD23, the low affinity IgE receptor. (PMID:12777399)
- role of the CD23/nitric oxide pathway in the control of the cytoadherence of Plasmodium falciparum parasitized red blood cells on endothelial cells (PMID:15272865)
- Data show that gamma-irradiation not only induced CD23 expression, but also augmented the interleukin-4-induced surface CD23 levels. (PMID:15469741)
- Downregulation of CD23 antigens activity are early steps in PI-induced apoptosis of B-cell chronic lymphocytic leukemia lymphocytes and may be part of the full apoptotic response. (PMID:15565166)
- Results suggest that CD23 should be included in the panel of antibodies currently used to characterize mediastinal large B-cell lymphomas. (PMID:15569053)
- review of mechanisms leading to the upregulation of CD23 in the leukemic cells and review of the potential functions of CD23 as well as its regulation by Notch2 in B-CLL (PMID:15621797)
- CD21 and CD23a are common targets for B lymphotropic gammaherpesviruses. (PMID:15795251)
- In humans, in contrast to what was previously found in mice, intestinal cells coexpress CD23a and CD23b, and the two splice forms show different localizations in polarized cells. (PMID:15843555)
- Retinoic acid inhibits CD40 plus IL-4 mediated IgE production through alterations of sCD23, sCD54 and IL-6 production (PMID:15883744)
- marked inhibition of cell cluster formation and proliferation is achieved by antibody treatment against the CD23 mature B cell surface marker expressed in LCL41 cells (PMID:16009564)
- Results describe the production of a recombinant form of human soluble CD23 with similar proinflammatory properties as the native protein. (PMID:16083870)
- CD23 encodes a functional IgE receptor on human intestinal epithelial cells and this epithelial receptor is likely to play an important role in food allergies. (PMID:16143132)
- CD23 is involved in both up- and down-regulation of IgE; CD23 can bind both its ligands, IgE and CD21, simultaneously. (PMID:16172256)
- The high-resolution crystal structures of the human CD23 lectin domain in the presence and absence of Ca2+ was solved. (PMID:16765898)
- CD23a is expressed normally on human IECs, and in the presence of IgE can function as an antigen-sampling mechanism capable of activating subepithelial mast cells. (PMID:16831589)
- low levels of c-Rel are the underlying cause of aberrant CD23 expression in non-X-linked hyper-IgM syndrome B cells (PMID:16896156)
- Our results indicate that CD23 expression in these human intestinal epithelial cells is mediated through the p38 MAPK pathway. (PMID:16899715)
- R62W influences the stability of membrane CD23 molecules due to possibly diminished N-glycosylation. (PMID:17301828)
- There is an unexpectedly high frequency of CD23 expression in follicular lymphomas in general, which is even more pronounced in inguinal nodes. (PMID:17493235)
- The interaction between alphavbeta5 and sCD23 indicates that integrins deliver to cells important signals initiated by soluble ligands without the requirement for interactions with RGD motifs in their common ligands. (PMID:17540777)
- the CD23 monomers inhibit and the oligomer stimulates IgE synthesis in human B cells after heavy chain switching to IgE (PMID:17576766)
- Transgenic CD23 enhances antibody and T-cell responses to IgE-complexed antigen, while it negatively regulates the total antibody response to a variety of antigens. (PMID:17635803)
- lumiliximab may be an effective treatment alone or in combination with rituximab or chemotherapy agents in chronic lymphocytic leukemia or other CD23-overexpressing B-cell malignancies (PMID:18032710)
- correlation of CD23 expression in B-chronic lymphocytic leukaemia & clinical parameters; CD23 expression is significantly decreased in patients with extremely high lymphocyte counts (PBL counts of >100 x 10(9)/l) & in the advanced stages of disease (PMID:18183502)
- The distinct punctate CD23 staining for Merkel cell carcinoma may be helpful in differentiating it from small cell carcinoma. (PMID:18616759)
- higher expression levels in adenoid tissue of children with house dust mite allergies (PMID:18657051)
- CD23 is a useful marker in distinguishing mediastinal diffuse large B-cell lymphoma and classical Hodgkin lymphoma in mediastinal biopsies. (PMID:19223373)
- The absolute number of B lymphocytes and the percentage of naive cells (CD23-/CD27-) decreased with age whereas there was an increase in memory cells (CD27+). (PMID:19290077)
- MyD88-dependent Toll-like receptor (TLR)4 agonists may enhance allergic responses by inducing the production of both CD23 and MMP9, resulting in increased cleavage of membrane CD23 and soluble CD23 accumulation. (PMID:19635918)
Cross-species orthologs
22 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | asgr1c.2 | ENSDARG00000046092 |
| danio_rerio | asgrl1 | ENSDARG00000046142 |
| danio_rerio | si:dkey-61f9.1 | ENSDARG00000070414 |
| danio_rerio | asgr1a | ENSDARG00000095963 |
| danio_rerio | si:cabz01007816.2 | ENSDARG00000102537 |
| danio_rerio | asgr1b | ENSDARG00000103480 |
| danio_rerio | si:ch211-283g2.5 | ENSDARG00000108953 |
| danio_rerio | ENSDARG00000111755 | |
| danio_rerio | ENSDARG00000112842 | |
| mus_musculus | Fcer2a | ENSMUSG00000005540 |
| rattus_norvegicus | Fcer2 | ENSRNOG00000001005 |
| drosophila_melanogaster | tfc | FBGN0035199 |
| drosophila_melanogaster | CG14866 | FBGN0038315 |
| drosophila_melanogaster | lectin-46Cb | FBGN0040092 |
| drosophila_melanogaster | lectin-46Ca | FBGN0040093 |
| drosophila_melanogaster | lectin-33A | FBGN0040096 |
| drosophila_melanogaster | CG34033 | FBGN0054033 |
| caenorhabditis_elegans | clec-87 | WBGENE00007709 |
| caenorhabditis_elegans | clec-91 | WBGENE00014117 |
| caenorhabditis_elegans | WBGENE00016088 | |
| caenorhabditis_elegans | WBGENE00018692 | |
| caenorhabditis_elegans | WBGENE00019606 |
Paralogs (14): CD209 (ENSG00000090659), CLEC4M (ENSG00000104938), CLEC4A (ENSG00000111729), CD207 (ENSG00000116031), CLEC10A (ENSG00000132514), ASGR1 (ENSG00000141505), CLEC4F (ENSG00000152672), ASGR2 (ENSG00000161944), CLEC4E (ENSG00000166523), CLEC4D (ENSG00000166527), CLEC4G (ENSG00000182566), CLEC17A (ENSG00000187912), CLEC4C (ENSG00000198178), CLEC6A (ENSG00000205846)
Protein
Protein identifiers
Low affinity immunoglobulin epsilon Fc receptor — P06734 (reviewed: P06734)
Alternative names: BLAST-2, C-type lectin domain family 4 member J, Fc-epsilon-RII, Immunoglobulin E-binding factor, Lymphocyte IgE receptor
All UniProt accessions (3): P06734, K3W4U1, M0R1R5
UniProt curated annotations — full annotation on UniProt →
Function. Low-affinity receptor for immunoglobulin E (IgE) and CR2/CD21. Has essential roles in the regulation of IgE production and in the differentiation of B cells. On B cells, initiates IgE-dependent antigen uptake and presentation to T cells. On macrophages, upon IgE binding and antigen cross-linking induces intracellular killing of parasites through activation of L-Arginine-nitric oxide pathway.
Subunit / interactions. Homotrimer. Interacts (via C-type lectin domain) with IGHE (via CH3 region); this interaction regulates IgE homeostasis. Interacts (via the C-terminus) with CR2/CD21 (via Sushi domain 1 and 2).
Subcellular location. Cell membrane. Secreted.
Tissue specificity. Detected in urine (at protein level).
Post-translational modifications. N- and O-glycosylated. The secreted form sCD23 is produced by ADAM10-mediated ectodomain shedding.
Miscellaneous. There are two kinds of Fc receptors for IgE, which differ in both structure and function: high affinity receptors on basophils and mast cells and low affinity receptors on lymphocytes and monocytes.
RefSeq proteins (3): NP_001193948, NP_001207429, NP_001993 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001304 | C-type_lectin-like | Domain |
| IPR016186 | C-type_lectin-like/link_sf | Homologous_superfamily |
| IPR016187 | CTDL_fold | Homologous_superfamily |
| IPR018378 | C-type_lectin_CS | Conserved_site |
| IPR033989 | CD209-like_CTLD | Domain |
| IPR050111 | C-type_lectin/snaclec_domain | Family |
Pfam: PF00059
UniProt features (47 total): strand 14, binding site 4, disulfide bond 4, sequence variant 3, turn 3, repeat 3, chain 2, region of interest 2, lipid moiety-binding region 2, glycosylation site 2, topological domain 2, helix 2, site 1, sequence conflict 1, transmembrane region 1, domain 1
Structure
Experimental structures (PDB)
23 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2H2T | X-RAY DIFFRACTION | 1.3 |
| 2H2R | X-RAY DIFFRACTION | 1.5 |
| 6Y0M | X-RAY DIFFRACTION | 1.5 |
| 6Y0L | X-RAY DIFFRACTION | 1.65 |
| 4J6J | X-RAY DIFFRACTION | 1.9 |
| 4J6P | X-RAY DIFFRACTION | 1.9 |
| 4GJ0 | X-RAY DIFFRACTION | 1.95 |
| 4G9A | X-RAY DIFFRACTION | 2 |
| 4GK1 | X-RAY DIFFRACTION | 2.24 |
| 4G96 | X-RAY DIFFRACTION | 2.25 |
| 4GI0 | X-RAY DIFFRACTION | 2.27 |
| 4J6K | X-RAY DIFFRACTION | 2.3 |
| 4J6M | X-RAY DIFFRACTION | 2.48 |
| 4J6Q | X-RAY DIFFRACTION | 2.54 |
| 4GJX | X-RAY DIFFRACTION | 2.8 |
| 4J6N | X-RAY DIFFRACTION | 2.85 |
| 4EZM | X-RAY DIFFRACTION | 3.1 |
| 4J6L | X-RAY DIFFRACTION | 3.15 |
| 4KI1 | X-RAY DIFFRACTION | 3.2 |
| 4GKO | X-RAY DIFFRACTION | 3.3 |
| 5LGK | X-RAY DIFFRACTION | 3.5 |
| 1T8C | SOLUTION NMR | |
| 1T8D | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P06734-F1 | 86.76 | 0.70 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 149–150 (cleavage)
Ligand- & substrate-binding residues (4): 249; 251; 269; 270
Post-translational modifications (2): 17, 18
Disulfide bonds (4): 160–288, 163–174, 191–282, 259–273
Glycosylation sites (2): 63, 296
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-2197563 | NOTCH2 intracellular domain regulates transcription |
| R-HSA-6783783 | Interleukin-10 signaling |
| R-HSA-6785807 | Interleukin-4 and Interleukin-13 signaling |
MSigDB gene sets: 262 (showing top):
REACTOME_SIGNALING_BY_NOTCH, LU_IL4_SIGNALING, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, MODULE_64, GOCC_CELL_SURFACE, MODULE_478, CROONQUIST_NRAS_SIGNALING_UP, GOBP_VESICLE_MEDIATED_TRANSPORT, GOBP_LEUKOCYTE_MEDIATED_IMMUNITY, GOBP_B_CELL_MEDIATED_IMMUNITY, GOBP_REGULATION_OF_IMMUNE_RESPONSE, GOBP_LYMPHOCYTE_MEDIATED_IMMUNITY, GOBP_FC_EPSILON_RECEPTOR_SIGNALING_PATHWAY, GOBP_MYELOID_LEUKOCYTE_ACTIVATION, GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION
GO Biological Process (9): B cell antigen processing and presentation (GO:0002450), positive regulation of humoral immune response mediated by circulating immunoglobulin (GO:0002925), immune response (GO:0006955), positive regulation of gene expression (GO:0010628), Fc-gamma receptor signaling pathway involved in phagocytosis (GO:0038096), macrophage activation (GO:0042116), defense response to bacterium (GO:0042742), Fc receptor-mediated immune complex endocytosis (GO:0160006), Fc-epsilon receptor signaling pathway (GO:0038095)
GO Molecular Function (8): protease binding (GO:0002020), integrin binding (GO:0005178), low-affinity IgE receptor activity (GO:0019769), IgE binding (GO:0019863), carbohydrate binding (GO:0030246), pattern recognition receptor activity (GO:0038187), metal ion binding (GO:0046872), protein binding (GO:0005515)
GO Cellular Component (5): plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), extracellular exosome (GO:0070062), extracellular region (GO:0005576), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Signaling by Interleukins | 2 |
| Signaling by NOTCH2 | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| binding | 2 |
| cellular anatomical structure | 2 |
| B cell mediated immunity | 1 |
| antigen processing and presentation | 1 |
| humoral immune response mediated by circulating immunoglobulin | 1 |
| positive regulation of immunoglobulin mediated immune response | 1 |
| positive regulation of humoral immune response | 1 |
| regulation of humoral immune response mediated by circulating immunoglobulin | 1 |
| immune system process | 1 |
| response to stimulus | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| Fc receptor mediated stimulatory signaling pathway | 1 |
| phagocytosis | 1 |
| Fc-gamma receptor signaling pathway | 1 |
| myeloid leukocyte activation | 1 |
| defense response | 1 |
| response to bacterium | 1 |
| receptor-mediated endocytosis | 1 |
| Fc receptor signaling pathway | 1 |
| enzyme binding | 1 |
| signaling receptor binding | 1 |
| protein-containing complex binding | 1 |
| cell adhesion molecule binding | 1 |
| IgE receptor activity | 1 |
| immunoglobulin binding | 1 |
| signaling receptor activity | 1 |
| cation binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane | 1 |
| cell surface | 1 |
| side of membrane | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
1092 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FCER2 | CR2 | P20023 | 936 |
| FCER2 | FCGR1A | P12314 | 674 |
| FCER2 | RBMS1 | P29558 | 640 |
| FCER2 | FCGR3A | P08637 | 615 |
| FCER2 | PAX5 | Q02548 | 615 |
| FCER2 | FCGR3B | O75015 | 601 |
| FCER2 | IL4 | P05112 | 593 |
| FCER2 | ADAM10 | O14672 | 551 |
| FCER2 | CXCL16 | Q9H2A7 | 549 |
| FCER2 | PDCL | Q13371 | 542 |
| FCER2 | GLCCI1 | Q86VQ1 | 540 |
| FCER2 | FCAR | P24071 | 511 |
| FCER2 | CD5 | P06127 | 507 |
| FCER2 | EFNA2 | O43921 | 497 |
| FCER2 | NOTCH2 | Q04721 | 490 |
IntAct
10 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FCER2 | CDH2 | psi-mi:“MI:0407”(direct interaction) | 0.600 |
| CDH2 | FCER2 | psi-mi:“MI:0403”(colocalization) | 0.600 |
| FCER2 | ATF7 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FGFR2 | FCER2 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| FCER2 | FGFR2 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CR2 | FCER2 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
BioGRID (9): ATF7 (Two-hybrid), FCER2 (Reconstituted Complex), XRCC6 (Reconstituted Complex), FCER2 (Affinity Capture-Western), RNF144B (Affinity Capture-Western), NOTCH2 (Affinity Capture-Western), FCER2 (Affinity Capture-Western), FCER2 (Affinity Capture-RNA), FCER2 (Affinity Capture-RNA)
ESM2 similar proteins: A3FM55, A7X401, A7X406, A7X409, A7X413, B0VXV0, B0VXV1, B4XSY7, B4XSY8, B4XSZ1, B4XT08, C0HKZ6, D3ZWT9, I7JUQ0, J3RY43, J3S3U6, J3SBN9, P02707, P06734, P0DJL4, P14371, P17346, P20693, P25031, P81017, P81116, Q38L02, Q4PRD2, Q64335, Q67EQ0, Q67EQ1, Q696W1, Q69FH1, Q6EIG7, Q6T7B5, Q71RQ9, Q7LZK5, Q7T2Q0, Q7T2Q1, Q8CJ91
Diamond homologs: A0ZT93, B0VXV2, B4XT08, B5U6Y6, B5U6Y7, C0HKZ7, O60449, P05140, P06027, P06734, P0DJL5, P10716, P13611, P14371, P20693, P34472, P55066, P55067, P81018, P81282, P81996, Q01758, Q02988, Q26627, Q28062, Q28670, Q28858, Q4PRD0, Q4TU93, Q4V885, Q61830, Q62059, Q64449, Q66S03, Q6X5S2, Q6X5S3, Q6X5S5, Q6X5S6, Q6X5S7, Q6X5S8
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRDM1 | “down-regulates quantity by repression” | FCER2 | “transcriptional regulation” |
| BCL6 | “down-regulates quantity by repression” | FCER2 | “transcriptional regulation” |
| IRF4 | “up-regulates quantity by expression” | FCER2 | “transcriptional regulation” |
| EGR1 | “down-regulates quantity by repression” | FCER2 | “transcriptional regulation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
64 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 50 |
| Likely benign | 7 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1391 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:7689426:AGTTG:A | acceptor_gain | 1.0000 |
| 19:7689427:GTTG:G | acceptor_gain | 1.0000 |
| 19:7689428:TTG:T | acceptor_gain | 1.0000 |
| 19:7689429:TG:T | acceptor_gain | 1.0000 |
| 19:7689431:C:CC | acceptor_gain | 1.0000 |
| 19:7690153:CCTCA:C | donor_loss | 1.0000 |
| 19:7690154:CTCAC:C | donor_loss | 1.0000 |
| 19:7690155:TCAC:T | donor_loss | 1.0000 |
| 19:7690156:CA:C | donor_loss | 1.0000 |
| 19:7690264:TC:T | acceptor_gain | 1.0000 |
| 19:7690265:CC:C | acceptor_gain | 1.0000 |
| 19:7690265:CCTGG:C | acceptor_loss | 1.0000 |
| 19:7690266:C:CC | acceptor_gain | 1.0000 |
| 19:7690512:C:CT | acceptor_gain | 1.0000 |
| 19:7696816:CACA:C | donor_gain | 1.0000 |
| 19:7696824:CCG:C | donor_gain | 1.0000 |
| 19:7696916:T:C | acceptor_gain | 1.0000 |
| 19:7697234:AC:A | donor_gain | 1.0000 |
| 19:7697235:CC:C | donor_gain | 1.0000 |
| 19:7697299:C:CC | acceptor_gain | 1.0000 |
| 19:7697303:T:TC | acceptor_gain | 1.0000 |
| 19:7702013:A:AC | donor_gain | 1.0000 |
| 19:7702014:C:CC | donor_gain | 1.0000 |
| 19:7702014:CT:C | donor_gain | 1.0000 |
| 19:7702014:CTCA:C | donor_gain | 1.0000 |
| 19:7702017:A:AC | donor_gain | 1.0000 |
| 19:7702018:C:CC | donor_gain | 1.0000 |
| 19:7689424:CCAGT:C | acceptor_gain | 0.9900 |
| 19:7689425:CAGT:C | acceptor_gain | 0.9900 |
| 19:7689428:T:C | acceptor_gain | 0.9900 |
AlphaMissense
2109 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:7689355:C:A | W268C | 0.999 |
| 19:7689355:C:G | W268C | 0.999 |
| 19:7689424:C:A | W245C | 0.999 |
| 19:7689424:C:G | W245C | 0.999 |
| 19:7690227:C:A | W220C | 0.998 |
| 19:7690227:C:G | W220C | 0.998 |
| 19:7690475:C:A | W184C | 0.998 |
| 19:7690475:C:G | W184C | 0.998 |
| 19:7690185:C:A | W234C | 0.997 |
| 19:7690185:C:G | W234C | 0.997 |
| 19:7690526:C:A | W167C | 0.997 |
| 19:7690526:C:G | W167C | 0.997 |
| 19:7689357:A:G | W268R | 0.996 |
| 19:7689357:A:T | W268R | 0.996 |
| 19:7690455:C:T | C191Y | 0.995 |
| 19:7689319:C:A | W280C | 0.994 |
| 19:7689319:C:G | W280C | 0.994 |
| 19:7690455:C:G | C191S | 0.992 |
| 19:7690456:A:T | C191S | 0.992 |
| 19:7690506:C:G | C174S | 0.992 |
| 19:7690507:A:T | C174S | 0.992 |
| 19:7689356:C:G | W268S | 0.991 |
| 19:7690229:A:G | W220R | 0.991 |
| 19:7690229:A:T | W220R | 0.991 |
| 19:7690260:G:C | F209L | 0.991 |
| 19:7690260:G:T | F209L | 0.991 |
| 19:7690261:A:C | F209C | 0.991 |
| 19:7690262:A:G | F209L | 0.991 |
| 19:7690454:A:C | C191W | 0.991 |
| 19:7689314:C:G | C282S | 0.990 |
dbSNP variants (sampled 300 via entrez): RS1000025918 (19:7700671 T>A,C), RS1000285709 (19:7703464 T>C), RS1000451044 (19:7703889 C>A), RS1000481356 (19:7698611 A>G,T), RS1000558528 (19:7696659 C>G), RS1000608019 (19:7700260 A>AGTTTTCCCCTCT), RS1000623508 (19:7701897 C>T), RS1000675696 (19:7694012 G>A), RS1000746650 (19:7692126 G>A,T), RS1001046174 (19:7693719 G>A,T), RS1001079797 (19:7701713 T>C), RS1001196356 (19:7688526 T>C,G), RS1001558559 (19:7697871 A>C), RS1001783718 (19:7693102 A>G), RS1002181926 (19:7699885 AT>A)
Disease associations
OMIM: gene MIM:151445 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003262_344 | Post bronchodilator FEV1 | 2.000000e-06 |
| GCST006585_918 | Blood protein levels | 2.000000e-25 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004314 | forced expiratory volume |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2940 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 21,247 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL279786 | BATIMASTAT | 2 | 21,247 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs28364072 | FCER2 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — Fc epsilon receptors
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| IgE heavy chain | Binding | 7.0 | pKd |
ChEMBL bioactivities
63 potent at pChembl≥5 of 65 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.92 | IC50 | 12 | nM | CHEMBL115348 |
| 7.89 | IC50 | 13 | nM | CHEMBL118054 |
| 7.80 | IC50 | 16 | nM | CHEMBL324564 |
| 7.70 | IC50 | 20 | nM | CHEMBL115326 |
| 7.70 | IC50 | 20 | nM | CHEMBL323228 |
| 7.70 | IC50 | 20 | nM | CHEMBL432583 |
| 7.70 | IC50 | 20 | nM | CHEMBL322050 |
| 7.52 | IC50 | 30 | nM | CHEMBL424251 |
| 7.52 | IC50 | 30 | nM | CHEMBL115211 |
| 7.40 | IC50 | 40 | nM | CHEMBL114657 |
| 7.40 | IC50 | 40 | nM | CHEMBL114427 |
| 7.30 | IC50 | 50 | nM | CHEMBL320799 |
| 7.22 | IC50 | 60 | nM | CHEMBL326148 |
| 7.16 | IC50 | 70 | nM | CHEMBL2112477 |
| 7.16 | IC50 | 70 | nM | CHEMBL2111687 |
| 7.10 | IC50 | 80 | nM | CHEMBL116506 |
| 7.10 | IC50 | 80 | nM | CHEMBL110713 |
| 7.00 | IC50 | 100 | nM | CHEMBL116435 |
| 7.00 | IC50 | 100 | nM | CHEMBL324205 |
| 7.00 | IC50 | 100 | nM | CHEMBL316550 |
| 7.00 | IC50 | 100 | nM | BATIMASTAT |
| 7.00 | IC50 | 100 | nM | CHEMBL115046 |
| 7.00 | IC50 | 100 | nM | CHEMBL326555 |
| 7.00 | IC50 | 100 | nM | CHEMBL320798 |
| 7.00 | IC50 | 100 | nM | CHEMBL110546 |
| 7.00 | EC50 | 100 | nM | CHEMBL318079 |
| 6.96 | EC50 | 110 | nM | CHEMBL104519 |
| 6.89 | IC50 | 130 | nM | CHEMBL326814 |
| 6.89 | IC50 | 130 | nM | CHEMBL324723 |
| 6.89 | IC50 | 130 | nM | CHEMBL114332 |
| 6.80 | IC50 | 160 | nM | CHEMBL113764 |
| 6.70 | IC50 | 200 | nM | CHEMBL420077 |
| 6.68 | IC50 | 210 | nM | CHEMBL325608 |
| 6.66 | IC50 | 220 | nM | CHEMBL108412 |
| 6.64 | IC50 | 230 | nM | CHEMBL108737 |
| 6.50 | EC50 | 313 | nM | CHEMBL104279 |
| 6.50 | IC50 | 320 | nM | CHEMBL110667 |
| 6.42 | IC50 | 380 | nM | CHEMBL433197 |
| 6.40 | IC50 | 400 | nM | CHEMBL322138 |
| 6.22 | IC50 | 600 | nM | CHEMBL108842 |
| 6.12 | IC50 | 760 | nM | CHEMBL106444 |
| 6.00 | IC50 | 1000 | nM | CHEMBL440712 |
| 6.00 | IC50 | 1000 | nM | CHEMBL106233 |
| 6.00 | IC50 | 1000 | nM | CHEMBL11306 |
| 6.00 | IC50 | 1000 | nM | CHEMBL92762 |
| 5.85 | EC50 | 1400 | nM | CHEMBL104333 |
| 5.80 | IC50 | 1600 | nM | CHEMBL94368 |
| 5.72 | IC50 | 1900 | nM | CHEMBL96654 |
| 5.71 | EC50 | 1940 | nM | CHEMBL104691 |
| 5.52 | IC50 | 3000 | nM | CHEMBL326985 |
PubChem BioAssay actives
63 with measured affinity, of 92 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S,3R)-N-hydroxy-2-[[(2E)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0120 | uM |
| methyl 2-[(2S,3R)-3-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]carbamoyl]-2-(hydroxycarbamoyl)-5-methylhexyl]sulfanylacetate | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0130 | uM |
| (2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(phenacylsulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0160 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-(1-benzothiophen-2-ylmethyl)-N’,3-dihydroxybutanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0200 | uM |
| (2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0200 | uM |
| (2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(quinolin-3-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0200 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(phenacylsulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0200 | uM |
| (2S,3R)-2-(benzylsulfanylmethyl)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide | 44538: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 30-100 | ic50 | 0.0300 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(thiophen-2-ylsulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0300 | uM |
| (2S,3R)-N-hydroxy-2-[(4-hydroxyphenyl)sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide | 44539: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 40-80 | ic50 | 0.0400 | uM |
| (2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(phenylsulfanylmethyl)butanediamide | 44539: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 40-80 | ic50 | 0.0400 | uM |
| methyl 4-[(2S,3R)-2-(hydroxycarbamoyl)-5-methyl-3-[[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]carbamoyl]hexyl]sulfanylbenzoate | 44670: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 50-150 | ic50 | 0.0500 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-3-[[(2E)-2-(4-chlorophenyl)-2-hydroxyiminoethyl]sulfanylmethyl]-N’-hydroxy-2-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0600 | uM |
| (3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-[[(2S)-1,2,3,4-tetrahydronaphthalen-2-yl]methyl]butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0700 | uM |
| (3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-[[(2R)-1,2,3,4-tetrahydronaphthalen-2-yl]methyl]butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0700 | uM |
| (2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-2-[(7-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.0800 | uM |
| (2S,3R)-N-hydroxy-2-[[(2E)-2-methoxyimino-2-phenylethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.0800 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-[(7-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.1000 | uM |
| (2S,3R)-3-(1-benzofuran-2-ylmethyl)-N,2-dihydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.1000 | uM |
| (2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-[(4-nitrophenyl)sulfanylmethyl]butanediamide | 44534: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-300 | ic50 | 0.1000 | uM |
| methyl 2-[(2S,3R)-2-(hydroxycarbamoyl)-5-methyl-3-[[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]carbamoyl]hexyl]sulfanylbenzoate | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1000 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-3-[[(2E)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]-2-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1000 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-[[(2Z)-2-methoxyimino-2-phenylethyl]sulfanylmethyl]butanediamide | 44534: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-300 | ic50 | 0.1000 | uM |
| (2R,3S)-3-[(2-amino-2-oxoethyl)sulfanylmethyl]-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide | 44533: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 100-200 | ic50 | 0.1000 | uM |
| (2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-(thiophen-2-ylsulfanylmethyl)butanediamide | 44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line) | ic50 | 0.1000 | uM |
| (3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-N-methyl-2-oxo-1H-indole-5-carboxamide | 166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | ec50 | 0.1000 | uM |
| (3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-N-methyl-2-oxo-1H-indole-5-sulfonamide | 166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | ec50 | 0.1100 | uM |
| (2S,3R)-N-hydroxy-2-[[(2E)-2-hydroxyimino-2-(4-phenylphenyl)ethyl]sulfanylmethyl]-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1300 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)-3-(sulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1300 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-[[(2Z)-2-hydroxyimino-2-phenylethyl]sulfanylmethyl]butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1300 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-(thiophen-2-ylsulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.1600 | uM |
| (2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-2-(cyclopentylmethyl)-N’-hydroxybutanediamide | 44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line) | ic50 | 0.2000 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-benzyl-N’-hydroxy-3-(phenacylsulfanylmethyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.2100 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-[(6-fluoronaphthalen-2-yl)methyl]-N’,3-dihydroxybutanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.2200 | uM |
| (2R,3S)-N-[(2S)-3,3-dimethyl-1-(methylamino)-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.2300 | uM |
| (3Z)-3-[(1-methylindol-3-yl)methylidene]-2-oxo-1H-indole-5-sulfonamide | 166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | ec50 | 0.3130 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-2-(1,3-benzothiazol-2-ylmethyl)-N’,3-dihydroxybutanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.3200 | uM |
| (2S,3R)-N-hydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(2-methylpropyl)-2-[[2-oxo-2-(4-phenylphenyl)ethyl]sulfanylmethyl]butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 0.3800 | uM |
| (2S,3R)-N,2-dihydroxy-N’-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-3-(naphthalen-2-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.4000 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’,3-dihydroxy-2-(naphthalen-2-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.6000 | uM |
| (2R,3S)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’,3-dihydroxy-2-[(7-hydroxynaphthalen-2-yl)methyl]butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 0.7600 | uM |
| (2R)-N’-hydroxy-N-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-2-(2-methylpropyl)butanediamide | 44536: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 1000-4000 | ic50 | 1.0000 | uM |
| (2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(naphthalen-2-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 1.0000 | uM |
| (2R,3S)-N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-N’,3-dihydroxy-2-(quinolin-6-ylmethyl)butanediamide | 91698: Inhibitory activity against IgE receptor | ic50 | 1.0000 | uM |
| S-[(2S,3R)-3-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]carbamoyl]-2-(hydroxycarbamoyl)-5-methylhexyl] ethanethioate | 44535: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 1000-3000 | ic50 | 1.0000 | uM |
| (3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-2-oxo-1H-indole-5-sulfonamide | 166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | ec50 | 1.4000 | uM |
| (2S)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-phenylbutanediamide | 44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line) | ic50 | 1.6000 | uM |
| (2R)-N-[(2S)-1-(benzylamino)-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide | 44531: Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line) | ic50 | 1.9000 | uM |
| 2-[[(3Z)-3-[(5-methoxy-1-methylindol-3-yl)methylidene]-2-oxo-1H-indol-5-yl]sulfonylamino]acetic acid | 166535: Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | ec50 | 1.9400 | uM |
| (2R)-N-[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-N’-hydroxy-2-(2-methylpropyl)butanediamide | 44532: Inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells | ic50 | 3.0000 | uM |
CTD chemical–gene interactions
20 total (human), top 20 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases mutagenesis, affects methylation | 2 |
| pimagedine | decreases reaction, increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| ethinyl estradiol-desogestrel combination | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | increases expression | 1 |
| Decitabine | affects expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Arsenic | decreases methylation | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Cisplatin | affects expression | 1 |
| Ethyl Methanesulfonate | decreases expression | 1 |
| Formaldehyde | decreases expression | 1 |
| Lead | decreases expression | 1 |
| Methyl Methanesulfonate | decreases expression | 1 |
| Methylprednisolone | affects binding, decreases reaction, increases reaction, increases expression | 1 |
| Nitrites | affects chemical synthesis | 1 |
| Tretinoin | increases expression | 1 |
| Methacholine Chloride | increases expression | 1 |
| Cadmium Chloride | increases expression, increases abundance | 1 |
| Particulate Matter | increases expression, increases reaction | 1 |
ChEMBL screening assays
14 unique, capped per target: 13 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL651875 | Binding | Tested for inhibition against CD23 (IgE receptor) proteolysis in membranes derived from RPM18866 cells ( a human B-cell line); value ranges from 50-150 | Selective inhibition of low affinity IgE receptor (CD23) processing. — Bioorg Med Chem Lett |
| CHEMBL769865 | Functional | Effect on IgE/Fcepsilon RI triggered rat basophil cell (RBL-2H3) degranulation assessed by measuring the amount of 5-HT release | Potent small molecule inhibitors of spleen tyrosine kinase (Syk). — Bioorg Med Chem Lett |
Cellosaurus cell lines
4 cell lines: 4 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1S1 | Abcam HeLa FCER2 KO | Cancer cell line | Female |
| CVCL_B8FV | Abcam HCT 116 FCER2 KO | Cancer cell line | Male |
| CVCL_B8VP | Abcam MCF-7 FCER2 KO | Cancer cell line | Female |
| CVCL_B9I2 | Abcam A-549 FCER2 KO | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.