FCHO2-DT

Summary

FCHO2-DT (FCHO2 divergent transcript, HGNC:55232) is a long non-coding RNA gene on chromosome 5q13.2.

Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition. Predicted to be part of signal recognition particle, endoplasmic reticulum targeting.

Source: NCBI Gene 118597832 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55232
Approved symbol	FCHO2-DT
Name	FCHO2 divergent transcript
Location	5q13.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00010375
Ensembl gene	ENSG00000272081
Ensembl biotype	lncRNA
Entrez	118597832
RNAcentral	URS00026A2033 — lncRNA, 2773 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000606587, ENST00000819922

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606587 — 2 exons

Exon	Start	End
ENSE00004225340	72955014	72955923
ENSE00004225343	72940349	72941050

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 87.41.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	87.41	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.62	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.71	gold quality
lower esophagus mucosa	UBERON:0035834	78.56	gold quality
left testis	UBERON:0004533	76.96	gold quality
right testis	UBERON:0004534	76.80	gold quality
testis	UBERON:0000473	76.76	gold quality
placenta	UBERON:0001987	72.97	gold quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
sural nerve	UBERON:0015488	68.62	gold quality
lymph node	UBERON:0000029	68.39	gold quality
esophagus mucosa	UBERON:0002469	68.32	gold quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
gall bladder	UBERON:0002110	66.40	gold quality
skeletal muscle tissue	UBERON:0001134	65.84	gold quality
ventricular zone	UBERON:0003053	65.79	gold quality
smooth muscle tissue	UBERON:0001135	65.07	gold quality
spleen	UBERON:0002106	65.03	gold quality
tonsil	UBERON:0002372	64.33	gold quality
ganglionic eminence	UBERON:0004023	64.29	gold quality
thoracic aorta	UBERON:0001515	63.55	gold quality
ascending aorta	UBERON:0001496	63.39	gold quality
descending thoracic aorta	UBERON:0002345	63.30	gold quality
right lung	UBERON:0002167	63.06	gold quality
right coronary artery	UBERON:0001625	63.00	gold quality
left coronary artery	UBERON:0001626	62.61	gold quality
endometrium	UBERON:0001295	62.32	gold quality
mucosa of stomach	UBERON:0001199	61.35	gold quality
calcaneal tendon	UBERON:0003701	61.07	gold quality
esophagus	UBERON:0001043	61.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.