FCRL3-AS1

Summary

FCRL3-AS1 (FCRL3 antisense RNA 1, HGNC:40842) is a long non-coding RNA gene on chromosome 1q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40842
Approved symbol	FCRL3-AS1
Name	FCRL3 antisense RNA 1
Location	1q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227217
Ensembl biotype	lncRNA
Entrez	139355230
RNAcentral	URS0002A1E6F7 — lncRNA, 834 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000453692, ENST00000780133

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453692 — 2 exons

Exon	Start	End
ENSE00001705096	157695965	157696459
ENSE00001708155	157691762	157692024

Expression profiles

Bgee: expression breadth broad, 76 present calls, max score 67.56.

Top tissues by expression

76 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	67.56	gold quality
tonsil	UBERON:0002372	67.37	gold quality
lymph node	UBERON:0000029	67.30	gold quality
left testis	UBERON:0004533	66.93	gold quality
testis	UBERON:0000473	66.51	gold quality
vermiform appendix	UBERON:0001154	63.48	gold quality
ganglionic eminence	UBERON:0004023	62.82	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.54	gold quality
blood	UBERON:0000178	60.11	gold quality
spleen	UBERON:0002106	58.55	gold quality
monocyte	CL:0000576	56.21	gold quality
prefrontal cortex	UBERON:0000451	55.65	gold quality
multicellular organism	UBERON:0000468	55.61	gold quality
anterior cingulate cortex	UBERON:0009835	55.24	gold quality
granulocyte	CL:0000094	55.16	gold quality
bone marrow	UBERON:0002371	53.65	gold quality
small intestine Peyer’s patch	UBERON:0003454	52.86	gold quality
small intestine	UBERON:0002108	52.81	gold quality
liver	UBERON:0002107	52.73	gold quality
islet of Langerhans	UBERON:0000006	51.83	gold quality
pancreas	UBERON:0001264	51.66	gold quality
putamen	UBERON:0001874	49.30	gold quality
Ammon’s horn	UBERON:0001954	49.05	gold quality
myometrium	UBERON:0001296	48.64	silver quality
urinary bladder	UBERON:0001255	48.47	gold quality
saliva-secreting gland	UBERON:0001044	48.22	gold quality
kidney	UBERON:0002113	48.22	silver quality
frontal cortex	UBERON:0001870	48.03	gold quality
placenta	UBERON:0001987	47.26	gold quality
lung	UBERON:0002048	47.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.