FFAR1
geneOn this page
Also known as FFA1R
Summary
FFAR1 (free fatty acid receptor 1, HGNC:4498) is a protein-coding gene on chromosome 19q13.12, encoding Free fatty acid receptor 1 (O14842). G-protein coupled receptor for medium and long chain saturated and unsaturated fatty acids that plays an important role in glucose homeostasis.
This gene encodes a member of the GP40 family of G protein-coupled receptors that are clustered together on chromosome 19. The encoded protein is a receptor for medium and long chain free fatty acids and may be involved in the metabolic regulation of insulin secretion. Polymorphisms in this gene may be associated with type 2 diabetes.
Source: NCBI Gene 2864 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 50 total — 2 pathogenic
- Druggable target: yes — 8 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_005303
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4498 |
| Approved symbol | FFAR1 |
| Name | free fatty acid receptor 1 |
| Location | 19q13.12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FFA1R |
| Ensembl gene | ENSG00000126266 |
| Ensembl biotype | protein_coding |
| OMIM | 603820 |
| Entrez | 2864 |
Gene structure
Transcript identifiers
Ensembl transcripts: 2 — 2 protein_coding
ENST00000246553, ENST00000950226
RefSeq mRNA: 1 — MANE Select: NM_005303
NM_005303
CCDS: CCDS12458
Canonical transcript exons
ENST00000246553 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000862788 | 35351205 | 35353864 |
| ENSE00003964439 | 35347902 | 35350838 |
Expression profiles
Bgee: expression breadth broad, 70 present calls, max score 81.57.
Top tissues by expression
213 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| islet of Langerhans | UBERON:0000006 | 81.57 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 72.70 | gold quality |
| pancreas | UBERON:0001264 | 68.82 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 65.74 | silver quality |
| buccal mucosa cell | CL:0002336 | 65.21 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 64.84 | gold quality |
| body of pancreas | UBERON:0001150 | 63.68 | gold quality |
| spinal cord | UBERON:0002240 | 63.65 | gold quality |
| sperm | CL:0000019 | 62.50 | gold quality |
| left ovary | UBERON:0002119 | 61.89 | gold quality |
| bone marrow | UBERON:0002371 | 61.15 | gold quality |
| parotid gland | UBERON:0001831 | 60.67 | gold quality |
| right ovary | UBERON:0002118 | 60.52 | gold quality |
| endothelial cell | CL:0000115 | 59.78 | gold quality |
| cerebellar vermis | UBERON:0004720 | 58.46 | gold quality |
| ovary | UBERON:0000992 | 58.43 | gold quality |
| granulocyte | CL:0000094 | 58.24 | gold quality |
| amniotic fluid | UBERON:0000173 | 58.15 | gold quality |
| medial globus pallidus | UBERON:0002477 | 57.72 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 56.51 | gold quality |
| oviduct epithelium | UBERON:0004804 | 56.42 | silver quality |
| globus pallidus | UBERON:0001875 | 56.38 | gold quality |
| decidua | UBERON:0002450 | 55.33 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 55.06 | gold quality |
| superficial temporal artery | UBERON:0001614 | 54.86 | gold quality |
| substantia nigra | UBERON:0002038 | 54.79 | gold quality |
| midbrain | UBERON:0001891 | 54.31 | gold quality |
| putamen | UBERON:0001874 | 54.30 | gold quality |
| skin of hip | UBERON:0001554 | 53.88 | silver quality |
| vena cava | UBERON:0004087 | 53.44 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-31 | yes | 20.37 |
| E-MTAB-5061 | yes | 17.34 |
| E-ANND-3 | yes | 4.57 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HR, PAX6, PDX1, ZGLP1
Literature-anchored findings (GeneRIF, showing 40)
- Free fatty acids regulate insulin secretion from pancreatic beta cells through GPR40 (PMID:12629551)
- Results suggest that GPR40 is implicated in the control of breast cancer cell growth by fatty acids and that GPR40 may provide a link between fat and cancer. (PMID:15695516)
- results suggest that the Arg211His polymorphism in the GPR40 protein gene may contribute to the variation of insulin secretory capacity in Japanese men (PMID:15736105)
- study provides evidence for GPR40 gene expression in pancreatic beta cells and implicates GPR40 in insulin secretion in humans. (PMID:16525841)
- GPR40 responded to fatty acids with different on-rates, and could be occupied by endogenous agonists before assay, masking the pharmacology of the receptor (PMID:17200419)
- This paper predicts the 5’ structure of the human GP40 gene based on alignments between mouse and human genomic DNA. (PMID:17525159)
- cell-specific expression of the GPR40 gene involves a characteristic chromatin organization of the locus and is controlled at the transcriptional level through HR2, a potent beta cell-specific enhancer (PMID:17525159)
- analysis of residues important for agonist recognition and activation in GPR40 (PMID:17699519)
- Variation in the FFAR1 gene may contribute to impaired beta cell function in type 2 diabetes (PMID:17987108)
- This newly identified GPR40 variant results in a loss of function that prevents the beta-cell ability to adequately sense lipids as an insulin secretory stimulus because of impaired intracellular Ca2+ concentration increase. (PMID:18583466)
- A flow cytometry-based binding assay for FFAR1 is reported. (PMID:18927207)
- In this review, the mechanism of receptor activation, pharmacology, and the physiological functions of the fatty acid binding receptors GPR40, GPR41, GPR43, and GPR119 are discussed. (PMID:19009545)
- Two arginine-glutamate ionic locks near the extracellular surface of FFAR1 gate receptor activation. (PMID:19068482)
- Transfection of GPR40 into mice may provide a novel insulin secretagogue beneficial for the treatment of type 2 diabetes. (PMID:19401434)
- results show expression of GPR40 in pancreatic islets which are regulated by FFA; finding that T2DM islets have lower GPR40 expression & correlation with insulin secretion raises possibility of involvement of GPR40 in diabetes beta-cell dysfunction (PMID:19758793)
- Results describe agonist-receptor interactions of GPR40 using molecular dynamics simulations. (PMID:20227312)
- differences in body composition and lipids associated with common SNPs in the FFAR1 gene (PMID:21552566)
- Phytanic acid and pristanic acid activate the free fatty acid receptor GPR40, a G-protein-coupled receptor which is involved in the Ca2+ signaling of fatty acids. (PMID:21570468)
- GPR40/FFA1 influences both insulin and glucagon secretion in rat islets, but only insulin secretion in human islets. (PMID:22106100)
- GPR41 gene expression is mediated by internal ribosome entry site (IRES)-dependent translation of bicistronic mRNA encoding GPR40 and GPR41 proteins (PMID:22493486)
- Propionate-stimulated GPR41 strongly coupled to ERK1/2 activation, while the coupling of linoleic acid-activated GPR40 and acetate-activated GPR43 was weaker. (PMID:22712802)
- A review of the physiological role of GPR40 and potential antidiabetic drugs targeting GPR40. [Review] (PMID:23023155)
- FFAR1 agonists support beta-cell function, but variation in FFAR1 influences NEFA effects on insulin secretion and therefore could affect therapeutic efficacy of FFAR1 agonists. (PMID:23378609)
- Potent free fatty acid 1 receptor agonist TUG-469 may be promising candidate for the treatment of type 2 diabetes mellitus. (PMID:23861168)
- It was concluded that FFAR1 in the pancreatic beta-cell plays a substantial role not only in acute potentiation of insulin secretion by palmitate but also in the negative long-term effects of palmitate on insulin metabolism. (PMID:24035997)
- In a neuroblastoma cell line, GPR40 was activated by docosahexaenoic acid and selective agonists, yet not by palmitic acid. Its activation provoked the phosphorylation of CREB. (PMID:24550142)
- arrestin-3 and GRK2 play an essential role in the regulation of agonist-mediated GPR40 internalization, but are not involved in the regulation of constitutive GPR40 internalization. (PMID:25038452)
- the crystal structure of hGPR40 receptor bound to TAK-875 at 2.3 A resolution (PMID:25043059)
- the activation of GPR40 attenuates cisplatin-induced apoptosis. (PMID:25092426)
- Characterizing pharmacological ligands to study the long-chain fatty acid receptors GPR40/FFA1 and GPR120/FFA4 (PMID:25131623)
- upregulation of GPR40 expression enhances the mitogenic response to epoxyeicosatrienoic acids (PMID:25679385)
- Palmitic acid boosted inflammatory response of microvascular endothelial cells to LPS via GPR40 and nSMase. (PMID:25795558)
- It regulates insulin secretion in pancreatic beta-cells. (review) (PMID:26028412)
- GPR40 and PPARgamma can function as an integrated two-receptor signal transduction pathway, a finding with implications for rational antidiabetic drug development. (PMID:26105050)
- GPR40 functions via both G protein-mediated and beta-arrestin-mediated mechanisms; endogenous and synthetic ligands differentially engage these pathways to promote insulin secretion. (PMID:26157145)
- These results suggest that distinct effects of GPR120 and GPR40 are involved in the acquisition of malignant property in pancreatic cancer cells. (PMID:26282200)
- Results show that GPR40 negatively regulated the cell motile and invasive activities of HT1080 cells suggesting that GPR40 negatively regulates the tumor progression of fibrosarcoma cells. (PMID:26331585)
- results suggest that FFAR1 is the functionally dominant free fatty acid receptor in both human and guinea pig airway smooth muscle. (PMID:26342087)
- knocking down the expression of the regulatory subunit PKAR1alpha, thereby reproducing the effects of IL-1beta and PGE on VSMCs, we demonstrated the contribution of PKA activity to the observed behavior of VSMCs (PMID:26408932)
- These data demonstrate that R104 in GPR40 is critically involved in the normal receptor functions. Interestingly, R104P is a registered single-nucleotide polymorphism of GPR40. (PMID:26505901)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Ffar1 | ENSMUSG00000044453 |
| rattus_norvegicus | Ffar1 | ENSRNOG00000024009 |
Paralogs (15): GPR31 (ENSG00000120436), GPR42 (ENSG00000126251), FFAR2 (ENSG00000126262), OXER1 (ENSG00000162881), OXGR1 (ENSG00000165621), P2RY1 (ENSG00000169860), P2RY6 (ENSG00000171631), GPR82 (ENSG00000171657), P2RY2 (ENSG00000175591), HCAR2 (ENSG00000182782), FFAR3 (ENSG00000185897), P2RY4 (ENSG00000186912), HCAR1 (ENSG00000196917), SUCNR1 (ENSG00000198829), HCAR3 (ENSG00000255398)
Protein
Protein identifiers
Free fatty acid receptor 1 — O14842 (reviewed: O14842)
Alternative names: G-protein coupled receptor 40
All UniProt accessions (1): O14842
UniProt curated annotations — full annotation on UniProt →
Function. G-protein coupled receptor for medium and long chain saturated and unsaturated fatty acids that plays an important role in glucose homeostasis. Fatty acid binding increases glucose-stimulated insulin secretion, and may also enhance the secretion of glucagon-like peptide 1 (GLP-1). May also play a role in bone homeostasis; receptor signaling activates pathways that inhibit osteoclast differentiation. Ligand binding leads to a conformation change that triggers signaling via G-proteins that activate phospholipase C, leading to an increase of the intracellular calcium concentration. Seems to act through a G(q) and G(i)-mediated pathway. Mediates the anti-inflammatory effects of omega-3 polyunsaturated fatty acids (PUFAs) via inhibition of NLRP3 inflammasome activation.
Subcellular location. Cell membrane.
Tissue specificity. Detected in brain and pancreas. Detected in pancreatic beta cells.
Activity regulation. The receptor is strongly activated by gamma-linolenic acid, while myristate gives a lower response. It is also activated by phytanic acid and pristanic acid. Is also activated by synthetic agonists, such as TAK-875 (fasiglifam); this compound is a partial agonist and potentiates the activity of the endogenous ligand gamma-linolenic acid.
Similarity. Belongs to the G-protein coupled receptor 1 family.
RefSeq proteins (1): NP_005294* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR013312 | GPR40-rel_orph | Family |
| IPR013313 | GPR40_recept_FA | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (51 total): mutagenesis site 13, helix 12, topological domain 8, transmembrane region 7, strand 3, site 2, chain 1, glycosylation site 1, disulfide bond 1, sequence variant 1, sequence conflict 1, turn 1
Structure
Experimental structures (PDB)
9 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5TZR | X-RAY DIFFRACTION | 2.2 |
| 4PHU | X-RAY DIFFRACTION | 2.33 |
| 5KW2 | X-RAY DIFFRACTION | 2.76 |
| 8EIT | ELECTRON MICROSCOPY | 2.8 |
| 8EJC | ELECTRON MICROSCOPY | 3 |
| 9K1C | ELECTRON MICROSCOPY | 3.2 |
| 5TZY | X-RAY DIFFRACTION | 3.22 |
| 8T3V | ELECTRON MICROSCOPY | 3.39 |
| 8EJK | ELECTRON MICROSCOPY | 3.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O14842-F1 | 89.85 | 0.79 |
Antibody-complex structures (SAbDab): 4 — 8EIT, 8EJC, 8EJK, 8T3V
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 145 (important for receptor activation); 172 (important for receptor activation)
Disulfide bonds (1): 79–170
Glycosylation sites (1): 155
Mutagenesis-validated functional residues (13):
| Position | Phenotype |
|---|---|
| 12 | reduces cell surface expression and response to linolenic acid and synthetic agonists. |
| 44 | reduces response to synthetic agonists. |
| 91 | reduces response to linolenic acid. reduces response to synthetic agonists. |
| 114 | reduces response to synthetic agonists. |
| 123 | reduces response to synthetic agonists. |
| 137 | reduces response to linolenic acid. reduces response to synthetic agonists. |
| 145 | constitutive receptor signaling. |
| 172 | constitutive receptor signaling. |
| 183 | reduces response to linolenic acid. strongly reduces response to synthetic agonists. |
| 240 | reduces response to linolenic acid. reduces response to synthetic agonists. |
| 244 | reduces response to linolenic acid. reduces response to synthetic agonists. |
| 258 | strongly reduces response to linolenic acid. strongly reduces response to synthetic agonists. |
| 258 | reduces response to linolenic acid. strongly reduces response to synthetic agonists. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-381771 | Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1) |
| R-HSA-400511 | Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-434316 | Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion |
| R-HSA-444209 | Free fatty acid receptors |
MSigDB gene sets: 87 (showing top):
GSE45365_HEALTHY_VS_MCMV_INFECTION_CD8_TCELL_IFNAR_KO_UP, GOBP_POSITIVE_REGULATION_OF_CALCIUM_ION_TRANSPORT, GOBP_NEGATIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION, GOBP_INSULIN_SECRETION, GOBP_POSITIVE_REGULATION_OF_PROTEIN_LOCALIZATION, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_HORMONE_TRANSPORT, GOBP_INTERLEUKIN_1_PRODUCTION, GOBP_MONOATOMIC_CATION_TRANSPORT, GOBP_CELL_CELL_SIGNALING, GOBP_POSITIVE_REGULATION_OF_INSULIN_SECRETION, GOBP_REGULATION_OF_PROTEIN_SECRETION, GOBP_NEGATIVE_REGULATION_OF_MULTICELLULAR_ORGANISMAL_PROCESS, GOBP_POSITIVE_REGULATION_OF_MONOATOMIC_ION_TRANSPORT, GOBP_CYTOKINE_PRODUCTION
GO Biological Process (11): G protein-coupled receptor signaling pathway (GO:0007186), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), positive regulation of cytosolic calcium ion concentration (GO:0007204), insulin secretion (GO:0030073), positive regulation of insulin secretion (GO:0032024), negative regulation of interleukin-1 beta production (GO:0032691), glucose homeostasis (GO:0042593), positive regulation of calcium ion transport (GO:0051928), response to fatty acid (GO:0070542), ligand-gated ion channel signaling pathway (GO:1990806), signal transduction (GO:0007165)
GO Molecular Function (3): G protein-coupled receptor activity (GO:0004930), lipid binding (GO:0008289), bioactive lipid receptor activity (GO:0045125)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| Incretin synthesis, secretion, and inactivation | 2 |
| GPCR downstream signalling | 1 |
| Free fatty acids regulate insulin secretion | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor activity | 2 |
| signal transduction | 2 |
| G protein-coupled receptor signaling pathway | 2 |
| phospholipase C activator activity | 1 |
| regulation of biological quality | 1 |
| protein secretion | 1 |
| peptide hormone secretion | 1 |
| insulin secretion | 1 |
| positive regulation of protein secretion | 1 |
| regulation of insulin secretion | 1 |
| positive regulation of peptide hormone secretion | 1 |
| interleukin-1 beta production | 1 |
| regulation of interleukin-1 beta production | 1 |
| negative regulation of interleukin-1 production | 1 |
| carbohydrate homeostasis | 1 |
| calcium ion transport | 1 |
| positive regulation of monoatomic ion transport | 1 |
| regulation of calcium ion transport | 1 |
| response to lipid | 1 |
| response to oxygen-containing compound | 1 |
| ligand-gated monoatomic ion channel activity | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| transmembrane signaling receptor activity | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
940 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FFAR1 | FFAR4 | Q5NUL3 | 938 |
| FFAR1 | GNAQ | P50148 | 898 |
| FFAR1 | GCG | P01275 | 867 |
| FFAR1 | GPR84 | Q9NQS5 | 831 |
| FFAR1 | GALR2 | O43603 | 829 |
| FFAR1 | GALR1 | P47211 | 818 |
| FFAR1 | GPR119 | Q8TDV5 | 814 |
| FFAR1 | GAL | P22466 | 800 |
| FFAR1 | CD22 | P20273 | 791 |
| FFAR1 | GIP | P09681 | 718 |
| FFAR1 | GLP1R | P43220 | 713 |
| FFAR1 | PPARG | P37231 | 702 |
| FFAR1 | ARRB2 | P32121 | 700 |
| FFAR1 | GPR142 | Q7Z601 | 689 |
| FFAR1 | INS | P01308 | 661 |
IntAct
2 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FFAR1 | SLC12A8 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (236): TNPO3 (Affinity Capture-MS), TOMM22 (Affinity Capture-MS), NTSR1 (Affinity Capture-MS), VKORC1L1 (Affinity Capture-MS), RAB18 (Affinity Capture-MS), RMND1 (Affinity Capture-MS), TMCO3 (Affinity Capture-MS), COX6C (Affinity Capture-MS), ABHD17B (Affinity Capture-MS), FBXO2 (Affinity Capture-MS), COX6A1 (Affinity Capture-MS), ND4 (Affinity Capture-MS), DECR2 (Affinity Capture-MS), RAB14 (Affinity Capture-MS), ERGIC2 (Affinity Capture-MS)
ESM2 similar proteins: A0A6I8PUB9, O00155, O00270, O14842, O14843, O15529, O43603, O46685, O60755, O88626, O88634, O88853, O88854, O88855, P0C5I1, P46092, P46093, P50132, Q149R9, Q15722, Q15743, Q1JQB3, Q3T181, Q3UFD7, Q3ZC80, Q4KLH9, Q6XKD3, Q76JU8, Q76JU9, Q76JV1, Q86VZ1, Q8BUD0, Q8BYC4, Q8HYC3, Q8K3T4, Q8TDS5, Q8TDU9, Q920E0, Q924U0, Q96G91
Diamond homologs: A0A4W3GG95, A0A6I8PUB9, B2GV46, B5X337, D4A7K7, E7FEL0, E9QJ73, F8VQN3, O00270, O08726, O08858, O14842, O14843, O15529, O42179, O43603, O46685, O60755, O77408, O88410, O88626, O88634, O88853, P21109, P23944, P25024, P25025, P35344, P35383, P35414, P41231, P41232, P46092, P46093, P49652, P49682, P49683, P50132, P51675, P51679
SIGNOR signaling
8 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| TAK-875 | up-regulates | FFAR1 | “chemical activation” |
| FFAR1 | “up-regulates activity” | GNAS | binding |
| FFAR1 | “up-regulates activity” | GNAL | binding |
| FFAR1 | “up-regulates activity” | GNAI1 | binding |
| FFAR1 | “up-regulates activity” | GNAO1 | binding |
| FFAR1 | “up-regulates activity” | GNAQ | binding |
| FFAR1 | “up-regulates activity” | GNA12 | binding |
| “hexadecanoic acid” | “up-regulates activity” | FFAR1 | “chemical activation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
50 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 0 |
| Uncertain significance | 46 |
| Likely benign | 2 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 394109 | GRCh37/hg19 19q12-13.12(chr19:30735448-36120396)x3 | Pathogenic |
| 4070957 | NM_005303.3(FFAR1):c.69_70insTTT (p.Asn23_Val24insPhe) | Pathogenic |
SpliceAI
63 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:35352725:C:G | acceptor_gain | 0.7200 |
| 19:35352657:G:C | donor_loss | 0.4600 |
| 19:35352658:T:A | donor_loss | 0.4600 |
| 19:35352749:G:A | acceptor_gain | 0.4600 |
| 19:35352652:GGGAG:G | donor_gain | 0.4100 |
| 19:35352653:GGAGG:G | donor_gain | 0.4100 |
| 19:35352724:A:AG | acceptor_gain | 0.3600 |
| 19:35352312:G:GT | donor_gain | 0.3500 |
| 19:35352721:T:TA | acceptor_gain | 0.3400 |
| 19:35352748:T:TA | acceptor_gain | 0.3400 |
| 19:35352943:AAG:A | acceptor_gain | 0.3300 |
| 19:35352653:GGAG:G | donor_gain | 0.3200 |
| 19:35352654:GAGG:G | donor_gain | 0.3200 |
| 19:35352659:AAGT:A | donor_loss | 0.3100 |
| 19:35352135:T:TA | acceptor_gain | 0.3000 |
| 19:35352655:AG:A | donor_gain | 0.3000 |
| 19:35352656:GG:G | donor_gain | 0.3000 |
| 19:35352943:AAGG:A | acceptor_gain | 0.3000 |
| 19:35352448:G:GT | donor_gain | 0.2800 |
| 19:35352661:G:C | donor_loss | 0.2800 |
| 19:35352944:A:G | acceptor_gain | 0.2700 |
| 19:35353772:T:A | acceptor_gain | 0.2700 |
| 19:35352646:G:GA | donor_gain | 0.2600 |
| 19:35352654:GAG:G | donor_gain | 0.2500 |
| 19:35352657:G:GG | donor_gain | 0.2500 |
| 19:35352696:T:TA | donor_gain | 0.2400 |
| 19:35352325:G:GT | donor_gain | 0.2300 |
| 19:35352724:AC:A | acceptor_gain | 0.2300 |
| 19:35352942:CA:C | acceptor_gain | 0.2300 |
| 19:35352943:AA:A | acceptor_gain | 0.2300 |
AlphaMissense
1862 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:35352350:T:A | W267R | 0.987 |
| 19:35352350:T:C | W267R | 0.987 |
| 19:35351767:G:C | W72C | 0.986 |
| 19:35351767:G:T | W72C | 0.986 |
| 19:35351852:A:C | S101R | 0.984 |
| 19:35351854:T:A | S101R | 0.984 |
| 19:35351854:T:G | S101R | 0.984 |
| 19:35351737:G:C | K62N | 0.983 |
| 19:35351737:G:T | K62N | 0.983 |
| 19:35351606:G:C | G19R | 0.975 |
| 19:35352274:C:A | N241K | 0.975 |
| 19:35352274:C:G | N241K | 0.975 |
| 19:35352353:A:C | S268R | 0.973 |
| 19:35352355:T:A | S268R | 0.973 |
| 19:35352355:T:G | S268R | 0.973 |
| 19:35352073:G:C | W174C | 0.972 |
| 19:35352073:G:T | W174C | 0.972 |
| 19:35352122:T:C | F191L | 0.970 |
| 19:35352124:T:A | F191L | 0.970 |
| 19:35352124:T:G | F191L | 0.970 |
| 19:35351931:G:A | C127Y | 0.969 |
| 19:35351864:T:G | Y105D | 0.968 |
| 19:35352104:A:C | S185R | 0.968 |
| 19:35352106:C:A | S185R | 0.968 |
| 19:35352106:C:G | S185R | 0.968 |
| 19:35351932:C:G | C127W | 0.966 |
| 19:35351607:G:A | G19D | 0.965 |
| 19:35352152:T:C | C201R | 0.963 |
| 19:35352263:G:A | G238R | 0.963 |
| 19:35352263:G:C | G238R | 0.963 |
dbSNP variants (sampled 300 via entrez): RS1000167582 (19:35351730 C>T), RS1000902013 (19:35354162 T>TTTTTG), RS1001174421 (19:35348539 C>T), RS1001789199 (19:35348784 C>A,G), RS1002232282 (19:35347301 G>A,T), RS1002373980 (19:35353505 C>T), RS1002424595 (19:35353184 G>A), RS1003048896 (19:35351122 G>A), RS1003238790 (19:35346285 G>A,T), RS1003438044 (19:35352122 T>C), RS1003512240 (19:35350977 G>A,T), RS1003765756 (19:35353350 G>A,C,T), RS1004220590 (19:35346473 C>A,G,T), RS1004309946 (19:35347357 A>G), RS1004377720 (19:35353180 T>A,C)
Disease associations
OMIM: gene MIM:603820 | disease phenotypes: MIM:143890
GenCC curated gene-disease
Mondo (1): hypercholesterolemia, familial, 1 (MONDO:0007750)
Orphanet (1): Homozygous familial hypercholesterolemia (Orphanet:391665)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL4422 (SINGLE PROTEIN), CHEMBL5482994 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
8 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 503,719 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL121 | ROSIGLITAZONE | 4 | 58,849 |
| CHEMBL1829174 | FASIGLIFAM | 3 | 815 |
| CHEMBL367149 | DOCONEXENT | 3 | 63,817 |
| CHEMBL464982 | GAMOLENIC ACID | 3 | 26,552 |
| CHEMBL267476 | LINOLEIC ACID | 2 | 323,195 |
| CHEMBL277522 | FENBUFEN | 2 | 30,447 |
| CHEMBL3915620 | LY2881835 | 1 | 10 |
| CHEMBL4297471 | MK-8666 | 1 | 34 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Free fatty acid receptors
Most potent curated ligand interactions (20 total), top 20:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| AMG-837 | Agonist | 8.5 | pEC50 |
| compound 4 [PMID: 27074625] | Agonist | 8.4 | pKd |
| TUG-770 | Full agonist | 8.2 | pEC50 |
| TUG-905 | Agonist | 8.05 | pEC50 |
| HWL-088 | Agonist | 7.72 | pEC50 |
| TUG-424 | Full agonist | 7.5 | pEC50 |
| ZYDG2 | Agonist | 7.39 | pEC50 |
| GW9508 | Partial agonist | 7.3 | pEC50 |
| fasiglifam | Agonist | 7.1 | pEC50 |
| compound B [PMID:18477808] | Full agonist | 6.1 | pEC50 |
| docosahexaenoic acid | Full agonist | 6.0 | pEC50 |
| GW1100 | Antagonist | 6.0 | pIC50 |
| medica 16 | Full agonist | 5.9 | pEC50 |
| α-linolenic acid | Full agonist | 5.7 | pEC50 |
| linoleic acid | Full agonist | 5.7 | pEC50 |
| oleic acid | Full agonist | 5.7 | pEC50 |
| rosiglitazone | Full agonist | 5.6 | pEC50 |
| palmitic acid | Full agonist | 5.3 | pEC50 |
| myristic acid | Full agonist | 5.1 | pEC50 |
| setogepram | Agonist | 2.98 | pEC50 |
Binding affinities (BindingDB)
577 measured of 639 human assays (639 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (2S,3R)-3-[3-[[1-[1-[2,5-bis(trifluoromethyl)phenyl]ethyl]azetidin-3-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 0.3 nM | US-10059667: Antidiabetic compounds |
| (3S)-3-[3-[[1-[1-[2,5-bis(trifluoromethyl)phenyl]ethyl]azetidin-3-yl]methoxy]phenyl]-3-cyclopropylpropanoic acid | EC50 | 0.6 nM | US-10059667: Antidiabetic compounds |
| (2S,3R)-3-[3-[[1-[[2,5-bis(trifluoromethyl)phenyl]methyl]-3-fluoroazetidin-3-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 0.9 nM | US-10059667: Antidiabetic compounds |
| (2S,3R)-3-[3-[[1-[[2,5-bis(trifluoromethyl)phenyl]methyl]piperidin-4-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 1 nM | US-10059667: Antidiabetic compounds |
| 3-(4-methoxy-2-methylphenyl)-5-[[4-[(2S)-1-(2H-tetrazol-5-yl)pent-3-yn-2-yl]phenoxy]methyl]thieno[2,3-c]pyridine | EC50 | 1 nM | US-10106553: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (2S,3R)-3-[3-[[1-[[2,5-bis(trifluoromethyl)phenyl]methyl]azetidin-3-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 1.4 nM | US-10059667: Antidiabetic compounds |
| (2S,3R)-3-[3-[[(3R)-1-[[2,5-bis(trifluoromethyl)phenyl]methyl]pyrrolidin-3-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 1.5 nM | US-10059667: Antidiabetic compounds |
| (2S,3R)-3-(3-(((S)-1-(2,5-bis(trifluoromethyl)benzyl)piperidin-3-yl)oxy)phenyl)-3-cyclopropyl-2-methylpropanoic acid | EC50 | 1.9 nM | US-10059667: Antidiabetic compounds |
| (3S)-3-[3-[[6-butan-2-yl-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]-3-cyclopropylpropanoic acid | EC50 | 2 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (3S)-3-[3-[[6-butyl-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]-3-cyclopropylpropanoic acid | EC50 | 2 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (3S)-3-cyclopropyl-3-[3-[[6-(2,2-dimethylpropyl)-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | EC50 | 2 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (3S)-3-cyclopropyl-3-[3-[[5-(5-fluoro-2-methoxy-4-pyridinyl)-6-(2-methylpropyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | EC50 | 2 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (2S,3R)-3-[3-[(3R)-1-[[2,5-bis(trifluoromethyl)phenyl]methyl]piperidin-3-yl]oxyphenyl]-3-cyclopropyl-2-methylpropanoic acid | EC50 | 2 nM | US-10059667: Antidiabetic compounds |
| 5-[(2S)-2-[4-[[3-(2-methylphenyl)-1-benzothiophen-5-yl]methoxy]phenyl]pent-3-ynyl]-2H-tetrazole | EC50 | 2 nM | US-10106553: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (3S)-3-(4-((3-(2-Methyl-4- ((tetrahydro-2H-pyran-4- yl)oxy)phenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 2 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| 3-(4-((3-(2- Methylphenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 2 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| trans-(1S,2S)-2-[5-[[(1R)-4-[2,6-dimethyl-4-(2-methyltetrazol-5-yl)phenyl]-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 2 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| (3S)-3-cyclopropyl-3-[3-[[6-(2,2-dimethylpropoxy)-5-(5-fluoro-2-methoxy-4-pyridinyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | EC50 | 3 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| 3-(2-methylphenyl)-5-[[4-[(2S)-1-(2H-tetrazol-5-yl)pent-3-yn-2-yl]phenoxy]methyl]thieno[2,3-c]pyridine | EC50 | 3 nM | US-10106553: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (3S)-3-[4-[[3-[2-Methyl-4-(3- methylsulfonylpropoxy)phenyl] benzo[b]thiophen-5- yl]methoxy]phenyl] hex-4-ynoic acid | EC50 | 3 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| [(S)-6-{(R)-7-Fluoro-4-[4-(2-methyl-2H-tetrazol-5-yl)-phenoxy]-indan-1-yloxy}-2,3-dihydro-benzofuran-3-yl]-acetic acid | EC50 | 3 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| (1S,2S)-2-(5-{(R)-4-[2,6-Dimethyl-4-(2-methyl-2H-tetrazol-5-yl)-phenyl]-indan-1-ylamino}-pyrazin-2-yl)-cyclopropanecarboxylic acid | EC50 | 3 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-7-fluoro-4-[4-[1-(2-hydroxy-2-methylpropyl)tetrazol-5-yl]-2,6-dimethylphenyl]-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 3 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| (2S,3R)-3-cyclopropyl-3-[2-[4-(5-fluoro-2-methoxy-4-pyridinyl)phenyl]-2,3,4,5-tetrahydro-1-benzoxepin-8-yl]-2-methylpropanoic acid | EC50 | 3.1 nM | US-10131651: [7,6]-fused bicyclic antidiabetic compounds |
| (3S)-3-(4-((3-(2-Methyl-4- (piperidin-4- ylmethyl)phenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl)hex-4- ynoic acid | EC50 | 4 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| ((S)-6-{(R)-7-Fluoro-4-[2-fluoro-4-(tetrahydro-2H-pyran-4-yloxy)phenoxy]-indan-1-yloxy}-2,3-dihydrobenzofuran-3-yl)-acetic acid | EC50 | 4 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| ((S)-6-{(R)-7-Fluoro-4-[4-(2-methylthiazol-4-yl)phenoxy]-indan-1-yloxy}-2,3-dihydrobenzofuran-3-yl)-acetic acid methyl ester | EC50 | 4 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| (1S,2S)-2-(5-{(R)-7-Fluoro-4-[4-(3-hydroxy-3-methyl-butoxy)-2,6-dimethyl-phenyl]-indan-1-ylamino}-pyrazin-2-yl)-cyclopropanecarboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| (1S,2S)-2-(5-{(R)-4-[4-(3-Hydroxy-3-methyl-butoxy)-2,6-dimethyl-phenyl]-indan-1-ylamino}-pyrazin-2-yl)-cyclopropanecarboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-4-[2,6-dimethyl-4-(oxan-4-ylmethoxy)phenyl]-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-4-(2,6-dichloro-3-methylphenyl)-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-4-[2,6-dimethyl-4-(5-methylpyrimidin-2-yl)phenyl]-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-4-(2,6-diethylphenyl)-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-4-(2,6-dimethyl-4-pyrazin-2-ylphenyl)-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 4 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| sodium (2S,3R)-3-cyclobutyl-3-[2-[4-(2-fluoro-5-methoxyphenyl)phenyl]-2,3,4,5-tetrahydro-1-benzoxepin-8-yl]-2-methylpropanoate | EC50 | 4.6 nM | US-10131651: [7,6]-fused bicyclic antidiabetic compounds |
| (3S)-3-[3-[[6-(2-azaspiro[3.3]heptan-2-yl)-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]-3-cyclopropylpropanoic acid | EC50 | 5 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (3S)-3-cyclopropyl-3-[3-[[6-(2,2-dimethylpropoxy)-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | EC50 | 5 nM | US-9688642: Substituted pyrazines as GPR40 agonists |
| (3S)-3-[4-[[3-(2- Methylphenyl)benzo[b]thiophen- 5-yl]methoxy]phenyl] hex-4-ynoic acid | EC50 | 5 nM | US-10195178: GPR40 agonists in anti-diabetic drug combinations |
| (3S)-3-[4-[[3-[4-[(4-Hydroxy- 1,1-dioxo-thian-4-yl)methoxy]- 2-methyl-phenyl]benzo[b] thiophen-5-yl]methoxy]phenyl] hex-4-ynoic acid | EC50 | 5 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (3S)-3-(4-((3-(4-(2- Methoxyethoxy)-2- methylphenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 5 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (3S)-3-(4-((3-(2- Bromophenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 5 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| [(S)-6-{(R)-7-Fluoro-4-[4-(3-hydroxy-3-methyl-butoxy)-phenoxy]-indan-1-yloxy}-2,3-dihydro-benzofuran-3-yl]-acetic acid | EC50 | 5 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| [(S)-6-{(R)-7-Fluoro-4-[4-(2-methyl-thiazol-5-yl)-phenoxy]-indan-1-yloxy}-2,3-dihydro-benzofuran-3-yl]-acetic acid | EC50 | 5 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| [(S)-6-((R)-7-Fluoro-4-{4-[(tetrahydro-2H-pyran-4-yl)methyl]phenoxy}-indan-1-yloxy)-2,3-dihydrobenzofuran-3-yl]-acetic acid | EC50 | 5 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
| trans-(1S,2S)-2-[5-[[(1R)-4-(2,6-dichloro-3,5-dimethoxyphenyl)-7-fluoro-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 5 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| trans-(1S,2S)-2-[5-[[(1R)-7-fluoro-4-[4-(2-methoxy-4-pyridinyl)-2,6-dimethylphenyl]-2,3-dihydro-1H-inden-1-yl]amino]pyrazin-2-yl]cyclopropane-1-carboxylic acid | EC50 | 5 nM | US-10253004: Indanylaminopyrazinylcyclopropanecarboxylic acids, pharmaceutical compositions and uses thereof |
| (3S)-3-(4-((3-(4-((1,1- Dioxidotetrahydro-2H- thiopyran-4-yl)methoxy)-2- methylphenyl)benzo[b]thiophen- 5-yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 6 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| 2-(3-Oxo-1-(4-((3-(2- methylphenyl) benzo[b]thiophen-5- yl)methoxy)phenyl)cyclobutyl) acetic acid | EC50 | 6 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| (3S)-3-(4-((3-(6-(2- Methoxyethoxy)-4- methylpyridin-3- yl)benzo[b]thiophen-5- yl)methoxy)phenyl) hex-4-ynoic acid | EC50 | 6 nM | US-10131648: Substituted benzothiophenyl derivatives as GPR40 agonists for the treatment of type II diabetes |
| {(S)-6-[(R)-4-(2,3-Dihydro-benzofuran-5-yloxy)-7-fluoro-indan-1-yloxy]-2,3-dihydro-benzofuran-3-yl}-acetic acid | EC50 | 6 nM | US-9597310: Indanyloxydihydrobenzofuranylacetic acids |
ChEMBL bioactivities
3247 potent at pChembl≥5 of 3394 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.40 | EC50 | 0.04 | nM | CHEMBL4859651 |
| 10.00 | EC50 | 0.1 | nM | CHEMBL475027 |
| 9.96 | EC50 | 0.11 | nM | CHEMBL4541658 |
| 9.70 | EC50 | 0.2 | nM | CHEMBL4463571 |
| 9.70 | EC50 | 0.2 | nM | CHEMBL6063201 |
| 9.60 | EC50 | 0.25 | nM | CHEMBL4457303 |
| 9.60 | EC50 | 0.25 | nM | CHEMBL4854804 |
| 9.52 | EC50 | 0.3 | nM | CHEMBL3944424 |
| 9.46 | EC50 | 0.35 | nM | FASIGLIFAM |
| 9.42 | EC50 | 0.38 | nM | CHEMBL4848974 |
| 9.39 | EC50 | 0.41 | nM | CHEMBL4859407 |
| 9.38 | EC50 | 0.417 | nM | CHEMBL4847662 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL3265149 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL4782004 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL5808987 |
| 9.14 | EC50 | 0.73 | nM | CHEMBL4857550 |
| 9.14 | EC50 | 0.729 | nM | CHEMBL4872298 |
| 9.10 | EC50 | 0.8 | nM | CHEMBL3922381 |
| 9.10 | EC50 | 0.8 | nM | CHEMBL4165147 |
| 9.10 | EC50 | 0.79 | nM | CHEMBL6063201 |
| 9.10 | EC50 | 0.8 | nM | CHEMBL5948561 |
| 9.10 | EC50 | 0.8 | nM | CHEMBL5873005 |
| 9.05 | EC50 | 0.9 | nM | CHEMBL4163182 |
| 9.05 | EC50 | 0.9 | nM | CHEMBL6041065 |
| 9.03 | EC50 | 0.94 | nM | CHEMBL4591657 |
| 9.01 | EC50 | 0.98 | nM | CHEMBL4797124 |
| 9.00 | EC50 | 1 | nM | CHEMBL4097527 |
| 9.00 | EC50 | 1 | nM | CHEMBL5847542 |
| 9.00 | EC50 | 1 | nM | CHEMBL5829303 |
| 9.00 | EC50 | 1 | nM | CHEMBL5998605 |
| 8.96 | EC50 | 1.1 | nM | CHEMBL3884803 |
| 8.96 | EC50 | 1.1 | nM | CHEMBL4159416 |
| 8.96 | EC50 | 1.1 | nM | CHEMBL4534836 |
| 8.96 | Ki | 1.1 | nM | CHEMBL4787010 |
| 8.96 | EC50 | 1.1 | nM | CHEMBL4787010 |
| 8.96 | EC50 | 1.11 | nM | CHEMBL4794409 |
| 8.92 | EC50 | 1.2 | nM | CHEMBL4160527 |
| 8.92 | EC50 | 1.2 | nM | LY2881835 |
| 8.89 | EC50 | 1.3 | nM | CHEMBL3287571 |
| 8.89 | Ki | 1.3 | nM | CHEMBL4793371 |
| 8.89 | EC50 | 1.3 | nM | CHEMBL1829173 |
| 8.89 | EC50 | 1.3 | nM | CHEMBL2385460 |
| 8.85 | EC50 | 1.4 | nM | CHEMBL3904378 |
| 8.85 | EC50 | 1.4 | nM | CHEMBL5944756 |
| 8.82 | Ki | 1.5 | nM | CHEMBL4798993 |
| 8.82 | Ki | 1.5 | nM | CHEMBL4797858 |
| 8.82 | EC50 | 1.5 | nM | CHEMBL4797858 |
| 8.82 | EC50 | 1.5 | nM | CHEMBL5802483 |
| 8.80 | EC50 | 1.6 | nM | CHEMBL4165008 |
| 8.80 | EC50 | 1.6 | nM | CHEMBL4166625 |
PubChem BioAssay actives
2335 with measured affinity, of 5005 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-[2-(4-fluoro-2-methylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | <0.0001 | uM |
| (3S)-3-cyclopropyl-3-[3-[[4-(2-fluoro-5-methoxyphenyl)cyclohexyl]methoxy]phenyl]-2,2-dimethylpropanoic acid | 1586862: Agonist activity at human GPR40 expressed in HEK293 cells assessed as induction of intracellular calcium mobilization by Fluo-8 dye based FLIPR assay | ec50 | 0.0001 | uM |
| (1R,1aR,6bS)-4-[2-chloro-4-(trifluoromethyl)phenoxy]-1a,6b-dihydro-1H-cyclopropa[b][1]benzofuran-1-carboxylic acid | 371568: Agonist activity at GPR40 expressed in CHO cells by FLIPR assay | ec50 | 0.0001 | uM |
| (2S,3R)-3-cyclopropyl-3-[3-[[4-(2-fluoro-5-methoxyphenyl)cyclohexyl]methoxy]phenyl]-2-methylpropanoic acid | 1586862: Agonist activity at human GPR40 expressed in HEK293 cells assessed as induction of intracellular calcium mobilization by Fluo-8 dye based FLIPR assay | ec50 | 0.0002 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[5-(5-fluoro-2-methoxy-4-pyridinyl)-2-pyridinyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0002 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[2-fluoro-4-(5-fluoro-2-methoxy-4-pyridinyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0002 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[4-(5-fluoro-2-methoxy-4-pyridinyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0002 | uM |
| (2R,3S)-3-cyclopropyl-2-fluoro-3-[3-[[4-(2-fluoro-5-methoxyphenyl)cyclohexyl]methoxy]phenyl]-2-methylpropanoic acid | 1586862: Agonist activity at human GPR40 expressed in HEK293 cells assessed as induction of intracellular calcium mobilization by Fluo-8 dye based FLIPR assay | ec50 | 0.0003 | uM |
| 3-[2-(4-chloro-2-methylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0003 | uM |
| 2-[(3S)-6-[[3-[2,6-dimethyl-4-(3-methylsulfonylpropoxy)phenyl]phenyl]methoxy]-2,3-dihydro-1-benzofuran-3-yl]acetic acid | 1734879: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in inositol phosphate accumulation in presence of terbium cryptate-labeled anti IP1/d2-labelled IP1 measured after 120 mins by HTRF assay | ec50 | 0.0003 | uM |
| (2S,3R)-3-[3-[[1-[1-[2,5-bis(trifluoromethyl)phenyl]ethyl]azetidin-3-yl]methoxy]phenyl]-3-cyclopropyl-2-methylpropanoic acid | 1328824: Agonist activity at human GPR40 expressed in CHO cells coexpressing NFAT BLA assessed as increase in intracellular Ca2+ flux by fluo-4-AM dye based FLIPR assay | ec50 | 0.0003 | uM |
| 3-[2-(2,5-dimethylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0004 | uM |
| 3-[2-(3-chloro-2-methylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0004 | uM |
| 3-[2-(2,4-dimethylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0004 | uM |
| (3S)-3-[4-[[5-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)thiophen-2-yl]methoxy]phenyl]hex-4-ynoic acid | 1734879: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in inositol phosphate accumulation in presence of terbium cryptate-labeled anti IP1/d2-labelled IP1 measured after 120 mins by HTRF assay | ec50 | 0.0006 | uM |
| (3S)-3-cyclopropyl-3-[2-[[4-(5-fluoro-2-methoxy-4-pyridinyl)-3-[(1R)-1-methoxy-2,2-dimethylpropyl]phenyl]methoxy]-4-pyridinyl]propanoic acid | 1137750: Agonist activity at GPR40 (unknown origin) expressed in mouse A9 cells assessed as inositol phosphate accumulation using [myo-3H]inositol after 1 hr by scintillation counting in presence of 0.3% human serum albumin | ec50 | 0.0006 | uM |
| 3-[2-(4-bromo-2-methylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0007 | uM |
| 3-[2-(2,6-dimethylphenyl)-1H-indol-5-yl]propanoic acid | 1750089: Agonist activity at GPR40 (unknown origin) expressed in CHO cells co-expressing luc2P/SRE assessed as firefly luciferase activity incubated for 24 hrs by Bright-Glo based serum response element (SRE) luciferase reporter assay | ec50 | 0.0007 | uM |
| (3S)-3-[4-[[3-[[thiophen-3-ylmethyl(2,2,2-trifluoroethyl)amino]methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1326120: Agonist activity at human GPR40 expressed in HEK293 cells measured after 18 to 20 hrs by beta-gal based luciferase reporter gene assay | ec50 | 0.0008 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[(2S)-2-[2-fluoro-4-(2-methoxy-4-pyridinyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0008 | uM |
| (3S)-3-cyclopropyl-3-[3-[[4-(2-fluoro-5-methoxyphenyl)cyclohexyl]methoxy]phenyl]propanoic acid | 1586862: Agonist activity at human GPR40 expressed in HEK293 cells assessed as induction of intracellular calcium mobilization by Fluo-8 dye based FLIPR assay | ec50 | 0.0009 | uM |
| (3S)-3-[4-[[2-[4-(difluoromethoxy)phenyl]-[1,2,4]triazolo[1,5-a]pyridin-6-yl]methoxy]phenyl]hex-4-ynoic acid | 1472502: Agonist activity at human GPR40 receptor expressed in HEK293 cells assessed as increase in intracellular calcium flux after 2.5 hrs measured over 3 mins by calcium 4 dye-based FLIPR assay | ec50 | 0.0010 | uM |
| (3S)-3-[4-[[4-methyl-5-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)thiophen-2-yl]methoxy]phenyl]hex-4-ynoic acid | 1734879: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in inositol phosphate accumulation in presence of terbium cryptate-labeled anti IP1/d2-labelled IP1 measured after 120 mins by HTRF assay | ec50 | 0.0010 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[4-(2-fluoro-5-methoxyphenyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0011 | uM |
| (2R,3S)-3-cyclopropyl-2-fluoro-3-[3-[[4-(2-fluoro-5-methoxyphenyl)cyclohexyl]methoxy]phenyl]propanoic acid | 1586862: Agonist activity at human GPR40 expressed in HEK293 cells assessed as induction of intracellular calcium mobilization by Fluo-8 dye based FLIPR assay | ec50 | 0.0011 | uM |
| (3S)-3-[4-[[4-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)-3-(trifluoromethyl)phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734870: Displacement of [3H]-TAK-875 from human recombinant full-length GPR40 expressed in human HEK293 cell membrane incubated for 2 hrs by solid scintillation counting method | ki | 0.0011 | uM |
| (2S,3R)-3-cyclopropyl-3-[(2S)-2-[4-(2-fluoro-5-methoxyphenyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoic acid | 1337107: Positive allosteric modulation of human GPR40 expressed in HEK293 cells assessed as IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0011 | uM |
| (3S)-3-[4-[[4-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734879: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in inositol phosphate accumulation in presence of terbium cryptate-labeled anti IP1/d2-labelled IP1 measured after 120 mins by HTRF assay | ec50 | 0.0012 | uM |
| (3S)-3-[4-[[3-(4-chloro-2-methylphenyl)phenyl]methoxy]phenyl]-3-(1-methyltetrazol-5-yl)propanoic acid | 1154882: Agonist activity at human GPR40 expressed in mouse A9 cells by inositol phosphate accumulation assay | ec50 | 0.0013 | uM |
| (3S)-3-[4-[[3-methyl-4-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734870: Displacement of [3H]-TAK-875 from human recombinant full-length GPR40 expressed in human HEK293 cell membrane incubated for 2 hrs by solid scintillation counting method | ki | 0.0013 | uM |
| (1’R,3R)-5-[[3-[(1R)-2,2-dimethylcyclopentyl]-4-(2-fluoro-5-methoxyphenyl)phenyl]methoxy]spiro[1,2-dihydroindene-3,2’-cyclopropane]-1’-carboxylic acid | 1936902: Agonist activity at FFAR1 (unknown origin) | ec50 | 0.0013 | uM |
| (3S)-3-[4-[[3-[4-(trifluoromethyl)phenyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734879: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in inositol phosphate accumulation in presence of terbium cryptate-labeled anti IP1/d2-labelled IP1 measured after 120 mins by HTRF assay | ec50 | 0.0013 | uM |
| (3S)-3-[4-[[3-[[2-methylpropyl(thiophen-3-ylmethyl)amino]methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1326120: Agonist activity at human GPR40 expressed in HEK293 cells measured after 18 to 20 hrs by beta-gal based luciferase reporter gene assay | ec50 | 0.0014 | uM |
| (3S)-3-[4-[[3-chloro-4-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734870: Displacement of [3H]-TAK-875 from human recombinant full-length GPR40 expressed in human HEK293 cell membrane incubated for 2 hrs by solid scintillation counting method | ki | 0.0015 | uM |
| (3S)-3-[4-[[4-[(1-phenylspiro[2H-indole-3,4’-piperidine]-1’-yl)methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1734870: Displacement of [3H]-TAK-875 from human recombinant full-length GPR40 expressed in human HEK293 cell membrane incubated for 2 hrs by solid scintillation counting method | ki | 0.0015 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[4-(2-methoxy-4-pyridinyl)phenyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0016 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[3-fluoro-5-(5-fluoro-2-methoxy-4-pyridinyl)-2-pyridinyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0016 | uM |
| (3S)-3-[4-[[5-(spiro[indene-1,4’-piperidine]-1’-ylmethyl)furan-2-yl]methoxy]phenyl]hex-4-ynoic acid | 1734871: Agonist activity at human recombinant full length GPR40 overexpressed in human HEK293 cells assessed as increase in intracellular calcium level measured over 3 mins by calcium 4 dye based FLIPR assay | ec50 | 0.0016 | uM |
| (2S,3R)-3-cyclopropyl-3-[2-[5-(2-fluoro-5-methoxyphenyl)-2-pyridinyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoic acid | 1337107: Positive allosteric modulation of human GPR40 expressed in HEK293 cells assessed as IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0017 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[5-(2-fluoro-5-methoxyphenyl)-2-pyridinyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0017 | uM |
| (3S)-3-cyclopropyl-3-[2-[[3-[(1R)-2,2-dimethylcyclopentyl]-4-(5-fluoro-2-methoxy-4-pyridinyl)phenyl]methoxy]-4-pyridinyl]propanoic acid | 1137750: Agonist activity at GPR40 (unknown origin) expressed in mouse A9 cells assessed as inositol phosphate accumulation using [myo-3H]inositol after 1 hr by scintillation counting in presence of 0.3% human serum albumin | ec50 | 0.0017 | uM |
| (3S)-3-[4-[[3-[[pyridin-4-ylmethyl(thiophen-3-ylmethyl)amino]methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1326120: Agonist activity at human GPR40 expressed in HEK293 cells measured after 18 to 20 hrs by beta-gal based luciferase reporter gene assay | ec50 | 0.0019 | uM |
| (3S)-3-[4-[[3-[[cyclopropyl(thiophen-3-ylmethyl)amino]methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1326120: Agonist activity at human GPR40 expressed in HEK293 cells measured after 18 to 20 hrs by beta-gal based luciferase reporter gene assay | ec50 | 0.0019 | uM |
| sodium (2S,3R)-3-cyclopropyl-3-[2-[5-(2-methoxy-4-pyridinyl)-2-pyridinyl]-3,4-dihydro-2H-chromen-7-yl]-2-methylpropanoate | 1356361: Agonist activity at recombinant human GPR40 expressed in HEK293 cells assessed as increase in IP1 accumulation measured after 60 mins by HTRF assay | ec50 | 0.0019 | uM |
| (3S)-3-[4-[[2-(4-propan-2-ylphenyl)-[1,2,4]triazolo[1,5-a]pyridin-6-yl]methoxy]phenyl]hex-4-ynoic acid | 1472502: Agonist activity at human GPR40 receptor expressed in HEK293 cells assessed as increase in intracellular calcium flux after 2.5 hrs measured over 3 mins by calcium 4 dye-based FLIPR assay | ec50 | 0.0020 | uM |
| (3S)-3-cyclopropyl-3-[3-[[6-(2,2-dimethylpropyl)-5-(2-fluoro-5-methoxyphenyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | 1679417: Agonist activity at human GPR40 transfected in HEK293 cells assessed as increase in intracellular calcium level incubated for 1 hr by Fluo-8 dye based fluorescence analysis | ec50 | 0.0020 | uM |
| (3S)-3-cyclopropyl-3-[3-[[5-(5-fluoro-2-methoxy-4-pyridinyl)-6-(2-methylpropyl)pyrazin-2-yl]methoxy]phenyl]propanoic acid | 1679417: Agonist activity at human GPR40 transfected in HEK293 cells assessed as increase in intracellular calcium level incubated for 1 hr by Fluo-8 dye based fluorescence analysis | ec50 | 0.0020 | uM |
| (3S)-3-[4-[[3-[[cyclohexyl(thiophen-3-ylmethyl)amino]methyl]phenyl]methoxy]phenyl]hex-4-ynoic acid | 1326120: Agonist activity at human GPR40 expressed in HEK293 cells measured after 18 to 20 hrs by beta-gal based luciferase reporter gene assay | ec50 | 0.0020 | uM |
| trans-(1S,2S)-2-[5-[[(1R)-7-fluoro-4-[4-[2-(2-hydroxy-2-methylpropyl)tetrazol-5-yl]-2,6-dimethylphenyl]-2,3-dihydro-1H-inden-1-yl]amino]-2-pyridinyl]cyclopropane-1-carboxylic acid | 1387535: Agonist activity at human GPR40 expressed in human 1321N1 cells assessed as IP1 accumulation after 1 hr by HTRF assay | ec50 | 0.0020 | uM |
| (2S,3R)-3-cyclopropyl-3-[2-fluoro-3-[[(1R)-5-(5-fluoro-2-methoxy-4-pyridinyl)-2,3-dihydro-1H-inden-1-yl]oxy]phenyl]-2-methylpropanoic acid | 1590251: Positive allosteric modulation of recombinant human GPR40 expressed in HEK293 cells assessed as increase in [3H]-myo-inositol phosphate accumulation measured after 60 mins in absence of human serum by microbeta counting method | ec50 | 0.0020 | uM |
CTD chemical–gene interactions
11 total (human), top 11 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation | 2 |
| fluorene-9-bisphenol | decreases expression | 1 |
| abrine | increases expression | 1 |
| TAK-875 | affects binding, increases activity | 1 |
| 3-(4-((2,6-dichloropyridin-4-yl)ethynyl)phenyl)propanoic acid | increases response to substance, affects binding, increases activity | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| Antirheumatic Agents | decreases expression | 1 |
| Cadmium Chloride | increases abundance, increases expression | 1 |
ChEMBL screening assays
444 unique, capped per target: 320 functional, 124 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1069231 | Functional | Agonist activity at FFA1 receptor up to 30 uM | The first synthetic agonists of FFA2: Discovery and SAR of phenylacetamides as allosteric modulators. — Bioorg Med Chem Lett |
| CHEMBL1780444 | Binding | Inhibition of human GPR40 expressed in CHO cells by SPA based binding assay | 3-Substituted 3-(4-aryloxyaryl)-propanoic acids as GPR40 agonists. — Bioorg Med Chem Lett |
Cellosaurus cell lines
6 cell lines: 3 spontaneously immortalized cell line, 2 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_H429 | CHO-K1/FFA1/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KT02 | 1321N1/FFAR1 | Cancer cell line | Male |
| CVCL_KU56 | CHO-K1 FFAR1 Gq | Spontaneously immortalized cell line | Female |
| CVCL_KZ27 | PathHunter DLD1 FFAR1 beta-arrestin | Cancer cell line | Male |
| CVCL_KZ48 | PathHunter HEK 293 FFAR1 beta-arrestin-1 | Transformed cell line | Female |
| CVCL_RQ12 | CHO-K1 AequoScreen FFAR1 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
28 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT06231459 | PHASE4 | COMPLETED | Expression of Pro- and Anti-inflammatory Cytokines During Anti-PCSK9 in Familial Hypercholesterolemia |
| NCT00000594 | PHASE3 | COMPLETED | NHLBI Type II Coronary Intervention Study |
| NCT00092833 | PHASE3 | TERMINATED | Investigational Drug in Patients With Hypercholesterolemia or in Patients With Sitosterolemia (0653-026)(COMPLETED) |
| NCT00134485 | PHASE3 | COMPLETED | Study To Evaluate The Safety And Efficacy Of Torcetrapib/Atorvastatin In Subjects With Familial Hypercholerolemia |
| NCT00134511 | PHASE3 | COMPLETED | Study To Evaluate The Effect Of Torcetrapib/Atorvastatin In Patients With Genetic High Cholesterol Disorder |
| NCT00136981 | PHASE3 | COMPLETED | Carotid B-Mode Ultrasound Study to Compare Anti-Atherosclerotic Effect of Torcetrpib/Atorvastatin to Atorvastatin Alone. |
| NCT00384293 | PHASE3 | TERMINATED | Carotid IMT (Intima Media Thickening) Study (0524A-041)(TERMINATED) |
| NCT01524289 | PHASE3 | COMPLETED | Study to Assess the Tolerability and Efficacy of Anacetrapib (MK-0859) Co-Administered With Statin in Participants With Heterozygous Familial Hypercholesterolemia (MK-0859-020) |
| NCT00280995 | PHASE2 | COMPLETED | Dose-escalating Safety Study of ISIS 301012 in Homozygous Familial Hypercholesterolemia Subjects on Lipid Lowering Therapy |
| NCT00281008 | PHASE2 | COMPLETED | Study of ISIS 301012 (Mipomersen) in Heterozygous Familial Hypercholesterolemia Subjects on Lipid Lowering Therapy |
| NCT01375751 | PHASE2 | COMPLETED | Reduction of Low-Density Lipoprotein Cholesterol (LDL-C) With PCSK9 Inhibition in Heterozygous Familial Hypercholesterolemia Disorder Study |
| NCT00515307 | PHASE1 | COMPLETED | Bone Marrow Stem Cells as a Source of Allogenic Hepatocyte Transplantation in Homozygous Familial Hypercholesterolemia |
| NCT01583647 | PHASE1 | TERMINATED | A Study of Extended-release (ER) Niacin/Laropiprant in Adolescents With Heterozygous Familial Hypercholesterolemia (MK-0524A-158) |
| NCT00005168 | Not specified | COMPLETED | Hyperapo B and Coronary Heart Disease |
| NCT01753232 | Not specified | COMPLETED | Safety and Efficacy of the DALI LDL-adsorber and MONET Lipoprotein Filter |
| NCT03018678 | Not specified | COMPLETED | Screening Protocol for a Gene Therapy Trial in Subjects With Homozygous Familial Hypercholesterolemia |
| NCT03110432 | Not specified | COMPLETED | Prospective German Very High Cardiovascular Risk Patients Dyslipidemia Treatment Indication Registry |
| NCT03795038 | Not specified | COMPLETED | Comparison of the Plasma Lipoprotein Apheresis Systems DIAMED and MONET vs. the Whole Blood Apheresis System DALI |
| NCT03989167 | Not specified | RECRUITING | Clinical Decision Support for Familial Hypercholesterolemia |
| NCT04073797 | Not specified | RECRUITING | PET Imaging of Inflammation and Lipid Lowering Study |
| NCT04118348 | Not specified | COMPLETED | Evaluating the Efficacy of Pediatric Lipid Screening Alerts |
| NCT04313270 | Not specified | UNKNOWN | Subclinical Atherosclerosis in Patients With Familial Hypercholesterolemia Treated With Evolocumab® |
| NCT04526457 | Not specified | COMPLETED | Is Family Screening Improved by Genetic Testing of Familial Hypercholesterolemia |
| NCT04656028 | Not specified | ACTIVE_NOT_RECRUITING | Genetic Testing and Motivational Counseling for FH |
| NCT04722068 | Not specified | COMPLETED | Regeneron 1331 Kinetics Sub-Study HoFH |
| NCT04837638 | Not specified | UNKNOWN | Diet Quality and Coronary Artery Calcification in Adults With Heterozygous Familial Hypercholesterolemia |
| NCT06555120 | Not specified | RECRUITING | Screening for Familial Hypercholesterolemia in Children |
| NCT07543731 | Not specified | NOT_YET_RECRUITING | A Real-World Study of Long-Term Adherence and Persistence to Inclisiran, Evolocumab, and Alirocumab |
Related Atlas pages
- Targeted by drugs: Doconexent, Fasiglifam, Rosiglitazone, Triglycerides, Medium-Chain
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): hypercholesterolemia, familial, 1