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FFAR4

gene
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Also known as PGR4

Summary

FFAR4 (free fatty acid receptor 4, HGNC:19061) is a protein-coding gene on chromosome 10q23.33, encoding Free fatty acid receptor 4 (Q5NUL3). G protein-coupled receptor for long-chain fatty acids (LCFAs) with a major role in adipogenesis, energy metabolism and inflammation.

This gene encodes a G protein-coupled receptor (GPR) which belongs to the rhodopsin family of GPRs. The encoded protein functions as a receptor for free fatty acids, including omega-3, and participates in suppressing anti-inflammatory responses and insulin sensitizing. Multiple transcript variants encoding different isoforms have been found for this gene.

Source: NCBI Gene 338557 — RefSeq curated summary.

At a glance

  • GWAS associations: 16
  • Clinical variants (ClinVar): 64 total — 1 likely-pathogenic
  • GTEx eGene: eQTL in 20 tissues, sQTL in 0 (q < 0.05)
  • ChEMBL bioactivity: 8 clinical-phase molecules tested; no curated mechanism-of-action drug
  • Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 1.03 (unconstrained)
  • MANE Select transcript: NM_001195755
  • Notable: 64 clinical variants but no curated precision-oncology (CIViC) evidence yet

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:19061
Approved symbolFFAR4
Namefree fatty acid receptor 4
Location10q23.33
Locus typegene with protein product
StatusApproved
AliasesPGR4
Ensembl geneENSG00000186188
Ensembl biotypeprotein_coding
OMIM609044
Entrez338557

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 4 protein_coding, 1 nonsense_mediated_decay

MANE Select: ENST00000371481

Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 3: 1

ENST00000371481, ENST00000371483, ENST00000604414, ENST00000944863, ENST00001001553

RefSeq mRNA: 2 — MANE Select: NM_001195755 NM_001195755, NM_181745

CCDS: CCDS31248, CCDS55720

Canonical transcript exons

ENST00000371481 — 3 exons

ExonStartEnd
ENSE000013345659357609193576219
ENSE000039019359358722093590072
ENSE000039021739356666593567287

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 81.68.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5467 / max 95.8970, expressed in 153 samples.

Highest expression (Bgee): mucosa of sigmoid colon, mucosa of transverse colon, rectum, colonic mucosa, adenohypophysis.

Genetic regulation across tissues (GTEx eQTL / sQTL)

FFAR4 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 20 tissues and its splicing (sQTL) in 0 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.

20 significant tissue × QTL associations:

TissueQTLq-valueSlopeLead variant
Pancreaseqtl3.7e-25-0.8010:93573306:A:G
Adipose Subcutaneouseqtl9.6e-18-0.2710:93557908:G:C
Lungeqtl2.7e-12+0.2610:93573306:A:G
Brain Nucleus accumbens basal gangliaeqtl1.3e-09+0.4810:93687720:C:G
Whole Bloodeqtl6.4e-09-0.2410:93515215:C:A
Breast Mammary Tissueeqtl3.1e-07+0.2810:93573062:C:T
Adipose Visceral Omentumeqtl4.8e-06+0.1810:93550782:T:C
Brain Frontal Cortex BA9eqtl1.4e-04+0.2210:93573306:A:G
Esophagus Musculariseqtl2.1e-04-0.2410:93516137:C:G
Esophagus Gastroesophageal Junctioneqtl8.7e-04-0.2910:93519084:C:T
Brain Cortexeqtl2.7e-03+0.2010:93564746:C:A
Brain Caudate basal gangliaeqtl4.2e-03+0.2610:93687720:C:G
Spleeneqtl1.0e-02-0.3510:93526960:C:A
Skin Sun Exposed Lower legeqtl1.1e-02+0.8210:93802258:G:A
Testiseqtl1.3e-02+0.3510:93571844:C:T
Brain Anterior cingulate cortex BA24eqtl2.1e-02-0.4710:93833357:G:A
Brain Substantia nigraeqtl2.5e-02-0.3510:93546920:C:T
Artery Tibialeqtl2.6e-02+0.2910:93514704:A:G
Brain Putamen basal gangliaeqtl2.7e-02+0.3710:93581054:T:G
Nerve Tibialeqtl3.4e-02-0.1510:93550955:T:C

FANTOM5 promoters

2 alternative TSS:

Promoter IDTPM avgSamples expressed
1062830.5169152
1062840.02985

Top tissues by expression

showing 100 of 238 tissues by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
mucosa of sigmoid colonUBERON:000499381.68gold quality
mucosa of transverse colonUBERON:000499181.35gold quality
rectumUBERON:000105280.55gold quality
colonic mucosaUBERON:000031780.00gold quality
adenohypophysisUBERON:000219679.02gold quality
pituitary glandUBERON:000000776.76gold quality
islet of LangerhansUBERON:000000676.71gold quality
transverse colonUBERON:000115768.53gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099165.10silver quality
adipose tissueUBERON:000101363.89gold quality
epithelial cell of pancreasCL:000008363.88gold quality
subcutaneous adipose tissueUBERON:000219062.98gold quality
granulocyteCL:000009461.72gold quality
prefrontal cortexUBERON:000045161.59gold quality
adipose tissue of abdominal regionUBERON:000780861.36gold quality
omental fat padUBERON:001041461.13gold quality
peritoneumUBERON:000235861.07gold quality
pancreasUBERON:000126460.72gold quality
Brodmann (1909) area 9UBERON:001354060.07gold quality
large intestineUBERON:000005959.91gold quality
right lungUBERON:000216759.85gold quality
colonic epitheliumUBERON:000039759.82silver quality
visceral pleuraUBERON:000240159.71gold quality
pancreatic ductal cellCL:000207959.65silver quality
right frontal lobeUBERON:000281059.39gold quality
colonUBERON:000115559.32gold quality
leukocyteCL:000073859.31gold quality
monocyteCL:000057659.24gold quality
Brodmann (1909) area 23UBERON:001355458.87silver quality
middle temporal gyrusUBERON:000277158.83silver quality
ileal mucosaUBERON:000033158.64silver quality
dorsolateral prefrontal cortexUBERON:000983458.47gold quality
frontal cortexUBERON:000187057.89gold quality
anterior cingulate cortexUBERON:000983557.49gold quality
lower lobe of lungUBERON:000894957.39silver quality
neocortexUBERON:000195056.90gold quality
intestineUBERON:000016056.62gold quality
upper lobe of lungUBERON:000894855.94gold quality
upper lobe of left lungUBERON:000895255.86gold quality
vermiform appendixUBERON:000115455.08gold quality
parietal pleuraUBERON:000240054.66gold quality
cerebral cortexUBERON:000095654.44gold quality
right testisUBERON:000453454.41gold quality
cardiac muscle of right atriumUBERON:000337954.34gold quality
left ventricle myocardiumUBERON:000656654.23gold quality
lungUBERON:000204854.19gold quality
gall bladderUBERON:000211054.07gold quality
skin of hipUBERON:000155453.94gold quality
kidney epitheliumUBERON:000481953.93gold quality
upper arm skinUBERON:000426353.52gold quality
buccal mucosa cellCL:000233653.38gold quality
layer of synovial tissueUBERON:000761653.36silver quality
body of pancreasUBERON:000115053.26gold quality
left testisUBERON:000453353.03gold quality
thoracic mammary glandUBERON:000520052.39gold quality
mammary glandUBERON:000191152.24gold quality
testisUBERON:000047352.11gold quality
hypothalamusUBERON:000189851.99gold quality
forebrainUBERON:000189051.93gold quality
caecumUBERON:000115351.76gold quality
endothelial cellCL:000011551.55gold quality
primary visual cortexUBERON:000243651.14silver quality
tibialis anteriorUBERON:000138550.57silver quality
myocardiumUBERON:000234950.25gold quality
tendon of biceps brachiiUBERON:000818849.33gold quality
brainUBERON:000095549.31gold quality
upper leg skinUBERON:000426249.20silver quality
cerebellar vermisUBERON:000472048.93gold quality
right adrenal gland cortexUBERON:003582748.52gold quality
occipital lobeUBERON:000202148.30silver quality
small intestine Peyer’s patchUBERON:000345448.03gold quality
left coronary arteryUBERON:000162647.96gold quality
small intestineUBERON:000210847.64gold quality
superior frontal gyrusUBERON:000266147.52gold quality
lymph nodeUBERON:000002947.37gold quality
coronary arteryUBERON:000162147.10gold quality
nasal cavity epitheliumUBERON:000538447.03gold quality
right lobe of liverUBERON:000111447.01gold quality
quadriceps femorisUBERON:000137746.87gold quality
left adrenal gland cortexUBERON:003582546.86gold quality
sural nerveUBERON:001548846.82gold quality
deltoidUBERON:000147646.80gold quality
left adrenal glandUBERON:000123446.77gold quality
adrenal cortexUBERON:000123546.70gold quality
right adrenal glandUBERON:000123346.69gold quality
skin of abdomenUBERON:000141646.62gold quality
duodenumUBERON:000211446.16gold quality
Ammon’s hornUBERON:000195446.01gold quality
multicellular organismUBERON:000046846.00gold quality
material anatomical entityUBERON:000046545.99gold quality
C1 segment of cervical spinal cordUBERON:000646945.94gold quality
adrenal glandUBERON:000236945.84gold quality
zone of skinUBERON:000001445.83gold quality
skin of legUBERON:000151145.74gold quality
nucleus accumbensUBERON:000188245.60gold quality
germinal epithelium of ovaryUBERON:000130445.59gold quality
anatomical systemUBERON:000046745.57gold quality
liverUBERON:000210745.47silver quality
amygdalaUBERON:000187645.43gold quality
spinal cordUBERON:000224045.43gold quality

Single-cell (SCXA)

Detected in 7 experiment(s), a significant marker in 5.

ExperimentMarker?Max mean expression
E-GEOD-125970yes19.25
E-MTAB-5061yes13.49
E-GEOD-81608yes7.68
E-ENAD-27yes4.76
E-GEOD-81547yes4.40
E-MTAB-7303no5.38
E-ANND-3no3.37

HPA expression

RNA tissue specificity: Group enriched

showing 60 of 66 HPA tissues / cells by nTPM:

Tissue / cellAxisnTPM
Rectumtissue10.7
Pituitary glandtissue10.4
Olfactory bulbtissue9.6
Prefrontal cortextissue9.3
Cerebral cortextissue9.3
Retrosplenial cortextissue9.3
Retrosplenial and cingulate cortextissue9.2
Insular cortextissue9.2
Hippocampal formationtissue9.1
Entorhinal cortextissue9.1
Cerebellumtissue9.0
Temporal cortextissue8.8
Amygdalatissue8.1
Colontissue7.8
Corpus callosumtissue7.5
Motor cortextissue7.3
Occipital cortextissue7.2
Ventral forebraintissue7.1
Basal gangliatissue7.0
Somatosensory cortextissue6.9
Septumtissue6.5
Periaqueductal graytissue6.2
Putamentissue6.1
Substantia nigratissue6.0
Hypothalamustissue5.4
Midbraintissue4.9
Medulla oblongatatissue4.8
Spinal cordtissue4.8
Superior colliculitissue4.3
Thalamustissue4.1
Ponstissue3.9
Adipose tissuetissue3.8
Lungtissue3.4
Hippocampustissue2.5
Postcentral gyrustissue2.4
Nucleus accumbenstissue2.3
Locus coeruleustissue2.3
Choroid plexustissue2.2
Fallopian tubetissue0.9
Skin 1tissue0.8
Appendixtissue0.6
Stomach 1tissue0.5
Pancreastissue0.5
Testistissue0.4
Livertissue0.4
Small intestinetissue0.4
Gallbladdertissue0.4
Duodenumtissue0.4
Adrenal glandtissue0.4
Breasttissue0.3
Skeletal muscletissue0.3
Lymph nodetissue0.2
Heart muscletissue0.2
Esophagustissue0.2
Smooth muscletissue0.2
Thymustissue0.2
Retinatissue0.1
Salivary glandtissue0.1
Parathyroid glandtissue0.1
Urinary bladdertissue0.1

Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — White matter (7.5), Subiculum (7.1), Ventromedial nucleus (7.1), Ventral hippocampus (6.8), Dorsal hippocampus (6.7).

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

Targeting FFAR4 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).

showing 30 of 57 miRNAs:

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-3646100.0073.565283
HSA-MIR-7110-3P100.0073.182486
HSA-MIR-6833-3P100.0070.633197
HSA-MIR-340-5P100.0072.504437
HSA-MIR-6873-3P100.0071.422626
HSA-MIR-4768-5P100.0069.492861
HSA-MIR-1250-3P99.9670.044038
HSA-MIR-6778-3P99.9667.292693
HSA-MIR-548AA99.9670.643753
HSA-MIR-548AP-3P99.9670.643753
HSA-MIR-548T-3P99.9670.643753
HSA-MIR-23A-3P99.9574.243163
HSA-MIR-23B-3P99.9574.243163
HSA-MIR-23C99.9573.923192
HSA-MIR-6809-3P99.9171.453814
HSA-MIR-7-1-3P99.9171.534384
HSA-MIR-7-2-3P99.9171.404394
HSA-MIR-153-5P99.8973.866317
HSA-MIR-489-3P99.8066.46839
HSA-MIR-4668-5P99.7970.583782
HSA-MIR-6817-3P99.7968.352126
HSA-MIR-431999.7669.832586
HSA-MIR-7157-5P99.6669.331829
HSA-MIR-497-3P99.6169.711990
HSA-MIR-431099.5968.842527
HSA-MIR-4762-5P99.5768.541424
HSA-MIR-5584-5P99.4968.222814
HSA-MIR-372-5P99.4169.112299
HSA-MIR-519D-5P99.4169.302057
HSA-MIR-569599.4167.481047

Functional genomics

gnomAD constraint: pLI 2.43e-05, LOEUF 1.03, missense Z -0.128 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD

Regional missense constraint (gnomAD RMC): no regional variation along ENST00000371481 — one region, missense o/e 0.99.

Literature-anchored findings (GeneRIF, showing 40)

  • possible significance of the alternate splice variant of GPR120 in human is discussed (PMID:19723586)
  • These are the first results which demonstrate specific phosphorylation of GPR120 isoforms upon agonism by free fatty acids and the first which distinguish the phosphorylation profiles of the two GPR120 isoforms. (PMID:20471368)
  • GPR120 may participate in human gustatory fatty acid perception. (PMID:21868624)
  • agonist-stimulated GPR120S and GPR120L receptors both recruited beta-arrestin2 and underwent robust internalization. (PMID:22282525)
  • GPR120 expression in adipose tissue is significantly higher in obese individuals than in lean controls; GPR120 exon sequencing in obese subjects reveals a deleterious non-synonymous mutation (p.R270H) that inhibits GPR120 signalling activity (PMID:22343897)
  • Our data suggest that the combination of common genetic variations in the GPR120 gene and dietary fat intake is a possible determinant of body mass index. (PMID:23594480)
  • Our results show that EPA, DHA and AA elicit the same signalling events, but with different kinetics and efficiency through GPR120 in Caco-2 cells. (PMID:23849180)
  • these results demonstrate that GPR120 functions as a tumor-promoting receptor in colorectal carcinoma and, therefore, shows promise as a new potential target for cancer therapeutics. (PMID:23851494)
  • this study demonstrates the expression of GPR120 in pancreas and shows the distribution of GPR120 in human and rat pancreas. (PMID:23993698)
  • Free fatty acids and protein kinase C activation induce GPR120 phosphorylation. (PMID:24239485)
  • Basal and heterologous phosphorylation of FFA4 is mediated by protein kinase C. (PMID:24412271)
  • CD36 and GPR120 have nonoverlapping roles in taste bud cell signaling during orogustatory perception of dietary lipids; these are differentially regulated by obesity. (PMID:24412488)
  • GPR120 is a nutrient sensor that is activated endogenously by both saturated and unsaturated long chain fatty acids. (PMID:24742677)
  • G protein-coupled receptor 120 (GPR 120) levels are reduced in pediatric obstructive sleep apnea and obesity (particularly when both are present) and may play a role in modulating the degree of insulin resistance (PMID:24790272)
  • Phosphorylation and structural elements within the C-terminal tail of FFA4 allow for the recruitment of arrestin-3. (PMID:24817122)
  • GPR120 is predominantly expressed in the microvillous membrane (MVM) of placenta and the expression level of this receptor in MVM is not altered by maternal body mass index (PMID:24844436)
  • detailed mode of binding of both long-chain fatty acid and synthetic agonist ligands at FFA4 by integrating molecular modeling, receptor mutagenesis, and ligand structure-activity relationship approaches in an iterative format (PMID:24860101)
  • Authors show that oleic acid stimulates lipid droplet formation by activating the long-chain fatty acid receptor FFAR4, which signals through a pertussis-toxin-sensitive G-protein signalling pathway involving PI3-kinase, AKT and (PLD) activities. (PMID:24876224)
  • Morbidly obese subjects had lower GPR120 mRNA and protein levels in visceral adipose tissue and a lower mRNA expression after a high-fat meal in peripheral blood mononuclear cells. (PMID:24913719)
  • GPR120 may have a positive role in the management of diabetes;GPR120 activation supports metabolic homeostasis by inhibiting inflammation in macrophages and regulating glucose and/or lipid metabolism in adipose, liver, and muscle tissues (PMID:25114508)
  • Characterizing pharmacological ligands to study the long-chain fatty acid receptors GPR40/FFA1 and GPR120/FFA4 (PMID:25131623)
  • a significant interaction effect on alanine transaminase levels suggesting a driving effect of the PNPLA3 148M allele on liver injury in children with obesity carrying this variant. (PMID:25250621)
  • TNFa decreases GLP-2 expression by up-regulating GPR120 in Crohn disease (PMID:25447053)
  • Findings demonstrate the novel functional properties of GPR120 on human eosinophils and indicate the previously unrecognized link between nutrient metabolism and the immune system. (PMID:25790291)
  • the low-frequency p.R270H variant which inhibits GPR120 activity might influence fasting glucose levels in a normal physiological range. (PMID:26025001)
  • It promotes the secretion of glucagon-like peptide-1 (GLP-1) in the intestine, and also acts as a lipid sensor in adipose tissue to sense dietary fat and control energy balance.(review) (PMID:26028412)
  • GPR120 functions as a receptor for omega-3 fatty acid, involving in regulating the secretion of gastrointestinal peptide hormone, adipogenesis, adipogenic differentiation and anti-inflammatory process. [review] (PMID:26230883)
  • These results suggest that distinct effects of GPR120 and GPR40 are involved in the acquisition of malignant property in pancreatic cancer cells. (PMID:26282200)
  • demonstrated a GPR120-mediated novel anti-inflammatory pathway in specific intestinal epithelial cell types that could be of therapeutic relevance to intestinal inflammatory disorders (PMID:26791484)
  • Ligands for FFAR4 comprise the family of long chain polyunsaturated fatty acids, suggesting that many of the long-known beneficial effects of these fats may be receptor mediated. (Review) (PMID:26827942)
  • GPR120 negatively and GPR40 positively regulate cellular functions during tumor progression in lung cancer cells. (PMID:26968637)
  • P.R270H of FFAR4 impairs Gq and Gi signalling of FFAR4 in vitro. (PMID:27068006)
  • p.R270H variant of GPR120 modulates the risk of type 2 diabetes in interaction with dietary fat intake. (PMID:27212621)
  • Fatty acids are capable of directly acting on visceral adipocytes to modulate differently TNF-alpha, IL-6, IL-10 and adiponectin expression, with a different and greater effect in morbidly obese subjects. These effects are largely annulled when GPR120 expression was silenced, which suggests that they could be mediated by GPR120. (PMID:27299582)
  • LPA1 plays a critical role in EGF responses and that FFA4 agonists inhibit proliferation by suppressing positive cross-talk between LPA1 and the EGF receptor (PMID:27474750)
  • These results indicated that GPR120 enhanced and GPR40 inhibited the cell motile activity of highly migratory osteosarcoma cells. (PMID:28159555)
  • G protein-coupled receptor 120 (GPR120) represents a promising target for the treatment of obesity-related metabolic disorders for its involvement in the regulation of adipogenesis, inflammation, glucose uptake, and insulin resistance. This review summarizes recent studies and advances regarding the systemic role of GPR120 in adipose tissue, including both white and brown adipocytes. [review] (PMID:28285320)
  • Studied action of linoleic acid (LA) on cell migration and neoplasm invasiveness of breast cancer cells. Findings show Akt2 activation requires EGFR and PI3K activity, whereas migration and invasion are dependent on FFAR4, EGFR and PI3K/Akt activity. (PMID:28456993)
  • Eicosapentaenoic acid prevents TNF-alpha-induced decrease of alpha-methylglucose uptake and AMPK phosphorylation in Caco-2 cells via GPR120 and AMPK activation. (PMID:28771713)
  • Data suggest that cytokines TNFalpha and interleukin-1b markedly reduce GPR120/FFAR4 expression in adipocytes; in contrast, these cytokines induce expression of GPR84 and GPR41/FFAR3 in adipocytes. These studies were conducted in adipocytes cultured from subcutaneous adipose tissue. (GPR = G-protein coupled receptor; FFAR = free fatty acid receptor) (PMID:28835131)

Cross-species orthologs

4 orthologs

OrganismSymbolGene ID
mus_musculusFfar4ENSMUSG00000054200
rattus_norvegicusFfar4ENSRNOG00000021763
drosophila_melanogasterCCKLR-17D3FBGN0030954
drosophila_melanogasterCCKLR-17D1FBGN0259231

Paralogs (16): NPFFR2 (ENSG00000056291), GNRHR (ENSG00000109163), CCKBR (ENSG00000110148), HCRTR1 (ENSG00000121764), AVPR2 (ENSG00000126895), GALR3 (ENSG00000128310), HCRTR2 (ENSG00000137252), NPFFR1 (ENSG00000148734), CCKAR (ENSG00000163394), AVPR1A (ENSG00000166148), GALR1 (ENSG00000166573), GPR22 (ENSG00000172209), GPR150 (ENSG00000178015), OXTR (ENSG00000180914), QRFPR (ENSG00000186867), AVPR1B (ENSG00000198049)

Mouse-model phenotypes

Observed phenotypes of the mouse ortholog (MGI:2147577) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 34 distinct phenotype terms.

Mouse phenotype (MP)Records
increased white adipose tissue amount1
increased circulating LDL cholesterol level1
abnormal lipid level1
increased circulating HDL cholesterol level1
abnormal gustatory system physiology1
abnormal taste sensitivity1
increased circulating insulin level1
hepatic steatosis1
increased circulating alanine transaminase level1
abnormal white adipose tissue morphology1
increased liver weight1
abnormal insulin secretion1
decreased energy expenditure1
increased circulating cholesterol level1
decreased oxygen consumption1
impaired glucose tolerance1
insulin resistance1
increased circulating glucose level1
increased susceptibility to diet-induced obesity1
increased circulating leptin level1
abnormal white adipose tissue physiology1
decreased physiological sensitivity to xenobiotic1
abnormal pancreatic somatostatin secretion1
increased white fat cell size1
enlarged pancreatic islets1

+9 more (showing top 25).

Additional cross-species homologs

Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.

OrganismUniProtIdentityMethod
Macaca fascicularisC8YUV097.8%Diamond
Sus scrofaA0A287A2K594.9%Diamond
Bos taurusP7926694.9%Diamond
Canis lupus familiarisP3055291.2%Diamond

Genomic neighbors (locus context)

Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).

SymbolTypeEntrez
MYOFprotein-coding26509
CEP55protein-coding55165
RBP4protein-coding5950
PDE6Cprotein-coding5146
FRA10AC1protein-coding118924

Protein

Protein identifiers

Free fatty acid receptor 4 — Q5NUL3 (reviewed: Q5NUL3)

Alternative names: G protein-coupled receptor 120, G protein-coupled receptor 129, G protein-coupled receptor GT01, G protein-coupled receptor PGR4, Omega-3 fatty acid receptor 1

All UniProt accessions (2): Q5NUL3, S4R3L2

UniProt curated annotations — full annotation on UniProt →

Function. G protein-coupled receptor for long-chain fatty acids (LCFAs) with a major role in adipogenesis, energy metabolism and inflammation. Signals via G protein and beta-arrestin pathways. LCFAs sensing initiates activation of phosphoinositidase C-linked G proteins GNAQ and GNA11 (G(q)/G(11)), inducing a variety of cellular responses via second messenger pathways such as intracellular calcium mobilization, modulation of cyclic adenosine monophosphate (cAMP) production, and mitogen-activated protein kinases (MAPKs). After LCFAs binding, associates with beta-arrestin ARRB2 that acts as an adapter protein coupling the receptor to specific downstream signaling pathways, as well as mediating receptor endocytosis. In response to dietary fats, plays an important role in the regulation of adipocyte proliferation and differentiation. Acts as a receptor for omega-3 polyunsaturated fatty acids (PUFAs) at primary cilium of perivascular preadipocytes, initiating an adipogenic program via cAMP and CTCF-dependent chromatin remodeling that ultimately results in transcriptional activation of adipogenic genes and cell cycle entry. Induces differentiation of brown adipocytes probably via autocrine and endocrine functions of FGF21 hormone. Activates brown adipocytes by initiating intracellular calcium signaling that leads to mitochondrial depolarization and fission, and overall increased mitochondrial respiration. Consequently stimulates fatty acid uptake and oxidation in mitochondria together with UCP1-mediated thermogenic respiration, eventually reducing fat mass. Regulates bi-potential differentiation of bone marrow mesenchymal stem cells toward osteoblasts or adipocytes likely by up-regulating distinct integrins. In response to dietary fats regulates hormone secretion and appetite. Stimulates GIP and GLP1 secretion from enteroendocrine cells as well as GCG secretion in pancreatic alpha cells, thereby playing a role in the regulation of blood glucose levels. Negatively regulates glucose-induced SST secretion in pancreatic delta cells. Mediates LCFAs inhibition of GHRL secretion, an appetite-controlling hormone. In taste buds, contributes to sensing of dietary fatty acids by the gustatory system. During the inflammatory response, promotes anti-inflammatory M2 macrophage differentiation in adipose tissue. Mediates the anti-inflammatory effects of omega-3 PUFAs via inhibition of NLRP3 inflammasome activation. In this pathway, interacts with adapter protein ARRB2 and inhibits the priming step triggered by Toll-like receptors (TLRs) at the level of TAK1 and TAB1. Further inhibits the activation step when ARRB2 directly associates with NLRP3, leading to inhibition of pro-inflammatory cytokine release. Mediates LCFAs anti-apoptotic effects. Mediates VLCFAs-dependent liver-to-adipose tissue signaling and adipose tissue thermogenesis. Receptor for LCFAs decoupled from G protein signaling. May signal through beta-arrestin pathway. After LCFAs binding, associates with beta-arrestin ARRB2 that may act as an adapter protein coupling the receptor to specific downstream signaling pathways, as well as mediating receptor endocytosis.

Subunit / interactions. Interacts (via C-terminus) with ARRB2 following LCFAs stimulation. Interacts (via C-terminus) with ARRB2 following LCFAs stimulation.

Subcellular location. Cell membrane. Endosome membrane. Lysosome membrane Cell membrane. Lysosome membrane. Cell projection. Cilium membrane.

Tissue specificity. The predominant isoform in human tissues. Expressed in adipose tissue, pancreatic islets, lung and brain. Expressed in alpha cells of pancreatic islets. Expressed in primary cilia of perivascular preadipocytes of white adipose tissue (at protein level). Abundant expression in the intestinal tract. Expressed in colonic intraepithelial neuroendocrine cells.

Post-translational modifications. Phosphorylated at two clusters of Ser and Thr residues located in the intracellular C-terminus, a prerequisite for FFAR4 internalization via an ARRB2-dependent pathway.

Polymorphism. Genetic variations in FFAR4 define the body mass index quantitative trait locus 10 (BMIQ10) [MIM:607514]. Variance in body mass index is a susceptibility factor for obesity.

Similarity. Belongs to the G protein-coupled receptor 1 family.

Isoforms (2)

UniProt IDNamesCanonical?
Q5NUL3-22yes
Q5NUL3-11

RefSeq proteins (2): NP_001182684, NP_859529 (=MANE)

Domains & families (InterPro)

IDNameType
IPR000276GPCR_RhodpsnFamily
IPR017452GPCR_Rhodpsn_7TMDomain

Pfam: PF00001

UniProt features (54 total): helix 14, topological domain 8, transmembrane region 7, modified residue 5, turn 5, mutagenesis site 3, sequence conflict 3, strand 3, sequence variant 2, chain 1, glycosylation site 1, disulfide bond 1, splice variant 1

Structure

Experimental structures (PDB)

16 structures by resolution:

PDBTitleMethodResolution (Å)
8G59Cryo-EM structure of the TUG891 bound GPR120-Giq complexELECTRON MICROSCOPY2.64
24XBCryo-EM Structure of the Apo FFAR4-Gq ComplexELECTRON MICROSCOPY2.65
24QHCryo-EM Structure of the FFAR4-Gi complex with unknown densityELECTRON MICROSCOPY2.74
8ID6Cryo-EM structure of the oleic acid bound GPR120-Gi complexELECTRON MICROSCOPY2.8
8IYSTUG891-bound FFAR4 in complex with GqELECTRON MICROSCOPY2.95
9XFICryo-EM structure of the Bavachalcone bound FFAR4-Giq complexELECTRON MICROSCOPY2.99
8ID8Cryo-EM structure of the TUG891 bound GPR120-Gi complexELECTRON MICROSCOPY3
8ID9Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi complexELECTRON MICROSCOPY3
8H4IDHA-bound FFAR4 in complex with GsELECTRON MICROSCOPY3.06
8T3OCryo-EM structure of the TUG-891 bound FFA4-Gq complexELECTRON MICROSCOPY3.06
8H4LDHA-bound FFAR4 in complex with GqELECTRON MICROSCOPY3.07
8H4KGW9508-bound FFAR4 in complex with GqELECTRON MICROSCOPY3.1
8ID3Cryo-EM structure of the 9-hydroxystearic acid bound GPR120-Gi complexELECTRON MICROSCOPY3.1
8ID4Cryo-EM structure of the linoleic acid bound GPR120-Gi complexELECTRON MICROSCOPY3.1
8T3QCryo-EM structure of the DHA bound FFA4-Gq complexELECTRON MICROSCOPY3.14
9XFJCryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)ELECTRON MICROSCOPY3.25

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q5NUL3-F179.160.46

Antibody-complex structures (SAbDab)

12 antibodies co-crystallized with this protein: 8G59, 8H4I, 8H4K, 8H4L, 8ID3, 8ID4, 8ID6, 8ID8, 8ID9, 8IYS, 8T3O, 8T3Q

Human Protein Atlas

Protein class: Transporters, G-protein coupled receptors, GPCRs excl olfactory receptors, Predicted membrane proteins, GPCRHMM predicted membrane proteins, FDA approved drug targets, Biotech drugs, Human disease related genes

Protein evidence: Evidence at protein level

Subcellular location (HPA, imaging): plasma membrane; basal body; vesicles

Antibody reliability (HPA): IF supported

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (5)

TypePositions
Phosphothreonine347, 349
Phosphoserine350, 357, 360

Disulfide bonds (1)

TypePositions
Disulfide bond111–194

Glycosylation sites (1)

TypePositions
N-linked (glcnac…) asparagine21

Mutagenesis-validated functional residues (3)

PositionPhenotype
99impairs lcfa-induced intracellular calcium release.
178has no effect on lcfa-induced intracellular calcium release.
347–360impairs lcfa-mediated phosphorylation and interaction with arrb2.

Function

Pathways and Gene Ontology

Reactome pathways

2 curated (TAS) of 11; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).

11 pathways:

IDPathwayEvidence
R-HSA-416476G alpha (q) signalling eventscurated
R-HSA-381771Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)curated
R-HSA-373076Class A/1 (Rhodopsin-like receptors)—
R-HSA-444209Free fatty acid receptorselectronic
R-HSA-388396GPCR downstream signalling—
R-HSA-500792GPCR ligand binding—
R-HSA-400508Incretin synthesis, secretion, and inactivation—
R-HSA-392499Metabolism of proteins—
R-HSA-2980736Peptide hormone metabolism—
R-HSA-162582Signal Transduction—
R-HSA-372790Signaling by GPCR—

MSigDB gene sets: 184 (showing top): GSE45365_NK_CELL_VS_CD8_TCELL_DN, GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_UP, GOBP_CARBOHYDRATE_TRANSPORT, GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, BENPORATH_ES_WITH_H3K27ME3, GOBP_NEGATIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION, GOBP_INFLAMMATORY_RESPONSE, GOCC_VACUOLAR_MEMBRANE, GOBP_POSITIVE_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOBP_WHITE_FAT_CELL_DIFFERENTIATION, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_NEGATIVE_REGULATION_OF_PEPTIDE_SECRETION, GOBP_OSTEOBLAST_DIFFERENTIATION, GOBP_SENSORY_PERCEPTION_OF_CHEMICAL_STIMULUS

GO Biological Process (24): negative regulation of cytokine production (GO:0001818), inflammatory response (GO:0006954), G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), positive regulation of cytosolic calcium ion concentration (GO:0007204), regulation of D-glucose transmembrane transport (GO:0010827), negative regulation of interleukin-1 beta production (GO:0032691), ghrelin secretion (GO:0036321), negative regulation of apoptotic process (GO:0043066), positive regulation of osteoblast differentiation (GO:0045669), hormone secretion (GO:0046879), negative regulation of inflammatory response (GO:0050728), white fat cell differentiation (GO:0050872), brown fat cell differentiation (GO:0050873), positive regulation of glucagon secretion (GO:0070094), positive regulation of ERK1 and ERK2 cascade (GO:0070374), negative regulation of somatostatin secretion (GO:0090275), positive regulation of brown fat cell differentiation (GO:0090336), positive regulation of cold-induced thermogenesis (GO:0120162), signal transduction (GO:0007165), cell differentiation (GO:0030154), fat cell differentiation (GO:0045444), detection of chemical stimulus involved in sensory perception of taste (GO:0050912)

GO Molecular Function (6): G protein-coupled receptor activity (GO:0004930), fatty acid binding (GO:0005504), taste receptor activity (GO:0008527), arrestin family protein binding (GO:1990763), protein binding (GO:0005515), lipid binding (GO:0008289)

GO Cellular Component (7): lysosomal membrane (GO:0005765), plasma membrane (GO:0005886), cilium (GO:0005929), endosome membrane (GO:0010008), endocytic vesicle (GO:0030139), ciliary membrane (GO:0060170), membrane (GO:0016020)

Reactome top-level categories

8 top-level categories:

CategoryPathways
Signaling by GPCR2
Incretin synthesis, secretion, and inactivation1
GPCR downstream signalling1
Class A/1 (Rhodopsin-like receptors)1
Metabolism of proteins1
Signal Transduction1
GPCR ligand binding1
Peptide hormone metabolism1

GO top-level categories

showing 60 of 66 GO namespaces:

CategoryTerms
G protein-coupled receptor signaling pathway2
fat cell differentiation2
transmembrane signaling receptor activity2
binding2
bounding membrane of organelle2
cytokine production1
regulation of cytokine production1
negative regulation of gene expression1
negative regulation of multicellular organismal process1
defense response1
G protein-coupled receptor activity1
signal transduction1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway1
adenylate cyclase activator activity1
phospholipase C activator activity1
regulation of biological quality1
regulation of transmembrane transport1
D-glucose transmembrane transport1
interleukin-1 beta production1
regulation of interleukin-1 beta production1
negative regulation of interleukin-1 production1
peptide hormone secretion1
apoptotic process1
regulation of apoptotic process1
negative regulation of programmed cell death1
osteoblast differentiation1
positive regulation of cell differentiation1
regulation of osteoblast differentiation1
hormone transport1
signal release1
inflammatory response1
negative regulation of defense response1
negative regulation of response to external stimulus1
regulation of inflammatory response1
glucagon secretion1
regulation of glucagon secretion1
positive regulation of peptide hormone secretion1
positive regulation of MAPK cascade1
ERK1 and ERK2 cascade1
regulation of ERK1 and ERK2 cascade1
somatostatin secretion1
regulation of somatostatin secretion1
negative regulation of peptide hormone secretion1
positive regulation of fat cell differentiation1
brown fat cell differentiation1
regulation of brown fat cell differentiation1
positive regulation of multicellular organismal process1
cold-induced thermogenesis1
regulation of cold-induced thermogenesis1
lipid binding1
monocarboxylic acid binding1
detection of chemical stimulus involved in sensory perception of taste1
protein binding1
lysosome1
lytic vacuole membrane1
membrane1
cell periphery1
intraciliary transport particle1
membrane-bounded organelle1
plasma membrane bounded cell projection1

Experimentally-supported GO annotations

GO terms backed by direct experimental evidence (ECO experimental codes) — 9 of 37 annotations. The rest are phylogenetic / computational / electronic (IEA).

9 experimentally-supported GO terms:

GO termNSEvidence
negative regulation of interleukin-1 beta productionBPmutant phenotype
phospholipase C-activating G protein-coupled receptor signaling pathwayBPmutant phenotype
positive regulation of cytosolic calcium ion concentrationBPdirect assay
white fat cell differentiationBPdirect assay
ciliumCCdirect assay
endosome membraneCCdirect assay
lysosomal membraneCCdirect assay
plasma membraneCCdirect assay
arrestin family protein bindingMFdirect assay

Protein interactions and networks

STRING

showing 15 of 954 interactions by confidence (×1000):

Protein AProtein BPartner UniProtScore
FFAR4FFAR1O14842891
FFAR4TAS1R3Q7RTX0791
FFAR4FFAR2O15552787
FFAR4FFAR3O14843779
FFAR4TAS1R2Q8TE23775
FFAR4GPR119Q8TDV5773
FFAR4PYYP10082731
FFAR4GPR84Q9NQS5725
FFAR4SLC5A1P13866701
FFAR4GCGP01275679
FFAR4MC3RP41968677
FFAR4GLP1RP43220668
FFAR4PCSK1P29120661
FFAR4GLP2RO95838659
FFAR4FTOQ9C0B1653

IntAct

Human interaction partners of FFAR4 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).

3 partners by confidence:

PartnerInteraction typeMIscoreRecords
RAMP1physical association0.4001
RAMP2physical association0.4001
RAMP3physical association0.4001

SIGNOR signaling

9 signaling interactions:

AEffectBMechanism
FFAR4“up-regulates activity”GNASbinding
FFAR4“up-regulates activity”GNALbinding
FFAR4“up-regulates activity”GNAI1binding
FFAR4“up-regulates activity”GNAI3binding
FFAR4“up-regulates activity”GNAO1binding
FFAR4“up-regulates activity”GNAZbinding
FFAR4“up-regulates activity”GNAQbinding
FFAR4“up-regulates activity”GNA14binding
“3-(4-{[5-Fluoro-2-(4-methylphenyl)phenyl]methoxy}phenyl)propanoic acid”“up-regulates activity”FFAR4“chemical activation”

Disease & clinical

Genetic variants

Variant evidence for FFAR4: 64 ClinVar records (1 pathogenic / likely pathogenic); 16 GWAS associations. Per-variant detail is on Sugi Variant.

ClinVar

64 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic1
Uncertain significance50
Likely benign6
Benign2

Top pathogenic / likely-pathogenic (1)

Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.

Variant IDHGVSClassificationReviewSubmitters
13068NM_006744.4(RBP4):c.278G>A (p.Gly93Asp)Likely pathogeniccriteria provided, multiple submitters, no conflicts3

Per-variant reference — Sugi Variant

Explore FFAR4’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.

SpliceAI

Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 27 predictions of 201):

Position(s)EffectΔscoreSites
10:93576220–93576221donor_loss1.00004
10:93576089–93576090acceptor_loss0.99006
10:93576220donor_loss0.9900
10:93567288–93567289donor_loss0.98005
10:93576086acceptor_gain0.9800
10:93587218–93587219acceptor_loss0.98006
10:93567289donor_loss0.9600
10:93576221donor_loss0.9600
10:93587217acceptor_loss0.9500
10:93576082acceptor_gain0.9400

AlphaMissense

702 missense substitutions predicted likely pathogenic (of 2,313 scored), across 204 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:

ResidueLikely-pathogenic substitutionsMean am_pathogenicityMax am_pathogenicity
D8580.9620.980
N5880.9050.985
F8880.8940.970
N31780.8890.976
D25980.8140.887
C19470.9820.991
W10470.9740.993
C11170.9730.988
W19870.9620.994
F2570.9560.984
W27770.9450.992
F17770.9370.979
W20770.9350.983
F2770.9330.979
F2870.9320.968
F27370.9220.992
E4370.9040.958
W16370.8960.984
F30370.8830.939
S13370.8720.995

HPA cancer prognostics

RNA cancer specificity: Cancer enhanced (Colon Adenocarcinoma, Rectum Adenocarcinoma)

Disease associations

OMIM: gene MIM:609044 | disease phenotypes: MIM:615147

GenCC curated gene-disease

Mondo (1): progressive retinal dystrophy due to retinol transport defect (MONDO:0014060)

Orphanet (1): Progressive retinal dystrophy due to retinol transport defect (Orphanet:352718)

GWAS associations

16 associations:

StudyTraitp-value
GCST010244_84Triglyceride levels2e-23
GCST010242_201HDL cholesterol levels2e-16
GCST90020025_1071Waist-to-hip ratio adjusted for BMI8e-15
GCST90020027_597Waist-hip index1e-14
GCST90020024_819A body shape index7e-13
GCST90020025_1069Waist-to-hip ratio adjusted for BMI7e-11
GCST90020027_595Waist-hip index7e-11
GCST90020025_1070Waist-to-hip ratio adjusted for BMI1e-10
GCST90020027_576Waist-hip index1e-10
GCST90020027_596Waist-hip index1e-10
GCST90020025_1067Waist-to-hip ratio adjusted for BMI2e-10
GCST90020029_1491Waist circumference adjusted for body mass index2e-10
GCST90020027_577Waist-hip index7e-10
GCST90020025_1068Waist-to-hip ratio adjusted for BMI1e-9
GCST90002405_537Reticulocyte count2e-9
GCST009174_2Response to (pegylated) interferon in chronic hepatitis B1e-6

EFO canonical traits (from GWAS)

6 canonical traits:

EFO IDTrait name
EFO:0007859response to interferon
EFO:0004612high density lipoprotein cholesterol measurement
EFO:0004530triglyceride measurement
EFO:0007986reticulocyte count
EFO:0007789BMI-adjusted waist circumference
EFO:0007788BMI-adjusted waist-hip ratio

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5339 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 396,972 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

8 molecules by phase:

MoleculeNamePhasePatents
CHEMBL1200517DIHYDROERGOTAMINE MESYLATE42,721
CHEMBL502182ELAGOLIX SODIUM4219
CHEMBL1707LOPERAMIDE HYDROCHLORIDE459,642
CHEMBL1722209TOLTERODINE TARTRATE43,939
CHEMBL344159TOLVAPTAN43,719
CHEMBL9506DEVAZEPIDE2613
CHEMBL267476LINOLEIC ACID2325,752
CHEMBL419667RELCOVAPTAN2367

PharmGKB: 1 entry (CPIC guideline: no)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: gpcr — Free fatty acid receptors

Most potent curated ligand interactions (11 total), top 11:

LigandActionAffinityParameter
compound A [PMID 24997608]Agonist7.62pEC50
TUG-891Full agonist7.0pEC50
TUG-1197Agonist6.63pEC50
NCG21Full agonist5.92pEC50
linoleic acidFull agonist5.89pEC50
α-linolenic acidFull agonist5.5pEC50
GW9508Partial agonist5.46pEC50
myristic acidFull agonist5.2pEC50
grifolic acid methyl etherPartial agonist5.01pA2
grifolic acidPartial agonist4.95pA2
oleic acidFull agonist4.7pEC50

Binding affinities (BindingDB)

772 measured of 896 human assays (926 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
CHEMBL4859651EC500.04 nM
CHEMBL4847662EC500.417 nM
CHEMBL4637969EC506 nM
CHEMBL4646784EC506 nM
CHEMBL2164239EC509.33 nM
3-(4(2’-Methylbiphenyl-3-ylmethylamino)phenyl)propanoic acidEC5011 nM
3-{4-[(2’,6’-Dimethylbiphenyl-3-yl)methoxy]-2-fluorophenyl}propanoic AcidEC5014 nM
CHEMBL2164242EC5014 nM
3-{4-[(2’-Methylbiphenyl-3-yl)methoxy]phenyl}propanic AcidEC5016.6 nM
CHEMBL2386363EC5017 nM
CHEMBL2163924EC5017.4 nM
CHEMBL2164241EC5017.8 nM
CHEMBL2386355EC5018 nM
CHEMBL2386364EC5018 nM
CHEMBL2386353EC5019 nM
CHEMBL3785637EC5020 nM
CHEMBL2315528EC5020 nM
CHEMBL5268316EC5020 nM
CHEMBL2386362EC5022 nM
CHEMBL2164240EC5023.4 nM
CHEMBL4162566EC5031 nM
CHEMBL3288346EC5032 nM
3-(4-(o-Tolylethynyl)phenyl)propanoic acidEC5032 nM
CHEMBL2386361EC5033 nM
CHEMBL4161536EC5034 nM
3-{4-[(3-Phenoxybenzyl)oxy]phenyl}propanoic AcidEC5034 nM
CHEMBL2386359EC5035 nM
CHEMBL3785764EC5037 nM
CHEMBL2386365EC5038 nM
CHEMBL4212409EC5040 nM
CHEMBL4209308EC5043 nM
CHEMBL4639009EC5045 nM
CHEMBL3787072EC5048 nM
CHEMBL4091723EC5050 nM
CHEMBL5272316EC5050 nM
CHEMBL4205429EC5050 nM
CHEMBL4159180EC5051 nM
CHEMBL3963542EC5055 nM
CHEMBL4086174EC5057 nM
CHEMBL3600993EC5058 nM
Trans-(2-((2′-fluoro-5′-isopropoxy-[1,1′-biphenyl]-4-yl)methyl)cyclopropyl)acetic acid (Enantiomer 2)EC5060 nMUS-9938222: Cyclopropanecarboxylic acid GPR120 modulators
CHEMBL4646553EC5061 nM
(1R)-2-[[2-fluoro-4-[2-fluoro-5-(3-fluorophenoxy)phenyl]phenoxy]methyl]cyclopropane-1-carboxylic acidEC5070 nMUS-9938222: Cyclopropanecarboxylic acid GPR120 modulators
CHEMBL4164509EC5071 nM
CHEMBL4642324EC5071 nM
CHEMBL2386354EC5074 nM
CHEMBL4169851EC5075 nM
CHEMBL1773254EC5075.9 nM
CHEMBL3926143EC5077 nM
(1R,2R)-2-(((2′,3-Difluoro-5′-phenoxy-[1,1′-biphenyl]-4-yl)oxy)methyl) cyclopropanecarboxylic acid (Enantiomer 1; absolute stereochemistry drawn in an arbitrary manner)EC5080 nMUS-9938222: Cyclopropanecarboxylic acid GPR120 modulators

ChEMBL bioactivities

1212 potent at pChembl≥5 of 1312 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
8.30EC505nMCHEMBL3952043
8.28EC505.3nMCHEMBL5286838
8.25EC505.6nMCHEMBL3972870
8.22EC506nMCHEMBL4637969
8.22EC506nMCHEMBL4646784
8.22EC506nMCHEMBL2386353
8.21EC506.2nMCHEMBL3960738
8.11EC507.8nMCHEMBL3898962
8.10EC508nMCHEMBL3970166
8.08EC508.3nMCHEMBL3909773
8.05EC509nMCHEMBL3940429
8.00EC5010nMCHEMBL3970238
7.96EC5011nMCHEMBL3890089
7.89EC5013nMCHEMBL3943315
7.89EC5013nMCHEMBL3947070
7.85EC5014nMCHEMBL3972870
7.85EC5014nMCHEMBL3952043
7.82EC5015nMCHEMBL3960738
7.82EC5015nMCHEMBL3940429
7.80EC5016nMCHEMBL3896657
7.77EC5017nMCHEMBL3959068
7.77EC5017nMCHEMBL3959144
7.77EC5017nMCHEMBL3960231
7.75EC5018nMCHEMBL3898962
7.70EC5020nMCHEMBL3973101
7.68EC5021nMCHEMBL3946820
7.68EC5021nMCHEMBL3947070
7.62EC5024nMCHEMBL3980898
7.60EC5025nMCHEMBL3970166
7.60EC5025nMCHEMBL3890089
7.60EC5025nMCHEMBL4171724
7.55EC5028nMCHEMBL3970238
7.52EC5030nMCHEMBL3946820
7.51EC5031nMCHEMBL4162566
7.50EC5032nMCHEMBL3932664
7.48EC5033nMCHEMBL3971308
7.47EC5034nMCHEMBL4161536
7.46EC5035nMCHEMBL3980898
7.43EC5037nMCHEMBL3943315
7.41EC5038.9nMCHEMBL3910333
7.40EC5040nMCHEMBL3910333
7.40EC5040nMCHEMBL3909773
7.40EC5040nMCHEMBL4103243
7.40EC5039.81nMCHEMBL4103243
7.40EC5040nMCHEMBL4212409
7.38EC5042nMCHEMBL3941726
7.38EC5042nMCHEMBL4165366
7.37EC5043nMCHEMBL3907996
7.37EC5043nMCHEMBL4209308
7.36EC5043.65nMCHEMBL2058533

PubChem BioAssay actives

567 with measured affinity, of 1436 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
3-[(2R)-6-[3-fluoro-4-methoxy-6-(3-methoxycyclobutyl)oxy-2-pyridinyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0050uM
2-(3-ethynyl-5-pyridin-3-yloxyphenyl)-3H-1,2-benzothiazole 1,1-dioxide1924330: Agonist activity at human GPR120 expressed in CHO-K1 cells by beta-arrestin assayec500.0053uM
3-[(2R)-6-[3-chloro-2-fluoro-5-[(5-methyl-1,3-thiazol-2-yl)oxy]phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0056uM
(3S)-3-cyclopropyl-3-[4-[[5-(2-fluoro-5-methoxyphenyl)-6-(3,3,3-trifluoropropoxy)pyrazin-2-yl]methoxy]phenyl]propanoic acid1662190: Agonist activity at GPR120 (unknown origin)ec500.0060uM
3-[4-[2-[2-(cyanomethyl)phenyl]ethynyl]-2-fluorophenyl]propanoic acid2087778: Agonist activity at human GPR120 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assayec500.0060uM
3-[3-chloro-4-[[6-(cyclopropylmethylsulfanyl)-2-pyridinyl]methoxy]phenyl]propanoic acid1662190: Agonist activity at GPR120 (unknown origin)ec500.0060uM
3-[(2R)-6-(6-cyclobutyloxy-3-fluoro-4-methoxy-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0062uM
cis-(1R,2R)-2-[(2R)-6-(6-cyclobutyloxy-3-fluoro-4-methoxy-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0078uM
cis-(1R,2R)-2-[(2R)-6-(5-cyclobutyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0080uM
3-[(2R)-6-(3-chloro-5-cyclobutyloxy-2-fluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0083uM
3-[(2R)-6-(5-cyclobutyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0090uM
3-[(2R)-6-(5-cyclobutyloxy-2-fluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0100uM
3-[(2R)-6-[2-fluoro-3-methoxy-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0110uM
3-[(2R)-6-[2-fluoro-3-methoxy-5-[(5-methyl-1,3-thiazol-2-yl)oxy]phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0130uM
3-[(2R)-6-(5-cyclobutyloxy-2,3-difluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0130uM
3-[5-[2-fluoro-5-(trifluoromethoxy)phenyl]-1-benzofuran-2-yl]propanoic acid1335045: Agonist activity at human GPR120 assessed as induction of beta-arrestin recruitmentec500.0160uM
3-[(2R)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0170uM
3-[(2R)-6-[3-chloro-2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0170uM
cis-(1R,2R)-2-[(2R)-6-[2,3-difluoro-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0170uM
4-[2,6-difluoro-4-[2-fluoro-5-(trifluoromethoxy)phenyl]phenoxy]butanoic acid1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assayec500.0200uM
3-[(2R)-6-(6-cyclobutyloxy-3-fluoro-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0210uM
3-[(2R)-6-[3,4-difluoro-6-(3-methoxycyclobutyl)oxy-2-pyridinyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0240uM
3-[4-[[3-(4-chloro-3-fluorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0250uM
3-[3-bromo-4-[[3-(4-chlorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]phenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0310uM
5-[2-[(2R)-6-(5-cyclopropyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]ethyl]-2H-tetrazole1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0320uM
cis-(1R,2R)-2-[(2R)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0330uM
3-[4-[[3-(4-ethylphenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0340uM
2-(3-chloro-5-pyridin-2-yloxyphenyl)-3H-1,2-benzothiazole 1,1-dioxide1321312: Agonist activity at human FFA4 expressed in human Flp-In T-REx293 cells by Fura2-AM dye based calcium mobilization assayec500.0389uM
3-[3-methyl-4-[(3-methyl-5-phenoxyphenyl)methoxy]phenyl]propanoic acid1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assayec500.0398uM
3-[4-[[1-(4-ethylphenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]-2,3-difluorophenyl]propanoic acid1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assayec500.0400uM
3-[(2S)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0420uM
3-[4-[[3-(4-chloro-2-fluorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0420uM
5-[2-[(2R)-6-[2-fluoro-3-methoxy-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]ethyl]-2H-tetrazole1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assayec500.0430uM
3-[4-[[1-(4-chlorophenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]-3,5-difluorophenyl]propan-1-ol1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assayec500.0430uM
3-[4-[[5-fluoro-2-(4-methylphenyl)phenyl]methoxy]phenyl]propanoic acid673111: Agonist activity at GPR120 expressed in HEK 293 cells assessed as beta-arrestin recruitment after 5 mins by BRET assayec500.0437uM
3-[8-(2-chloro-5-cyclobutyloxyphenyl)-8-azaspiro[4.5]decan-3-yl]propanoic acid1662190: Agonist activity at GPR120 (unknown origin)ec500.0448uM
4-[4-[[2-(5,6,7,8-tetrahydronaphthalen-2-yl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid1924333: Agonist activity at human GPR120 expressed in CHO-K1 cells by BRET assayec500.0500uM
4-[4-[[2-(4-cyclopropylphenyl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid1662190: Agonist activity at GPR120 (unknown origin)ec500.0500uM
4-[4-[[2-(4-methylphenyl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid1924333: Agonist activity at human GPR120 expressed in CHO-K1 cells by BRET assayec500.0500uM
3-[3,5-difluoro-4-[[1-(4-methylphenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]phenyl]propanoic acid1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assayec500.0500uM
3-[4-[(2-bromo-5-methylphenyl)methoxy]-3-methylphenyl]propanoic acid1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assayec500.0501uM
3-[4-[[3-(4-chlorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0510uM
3-[3,5-difluoro-4-[[5-(trifluoromethyl)-3-[4-(trifluoromethyl)phenyl]-1,2-thiazol-4-yl]methoxy]phenyl]propanoic acid1502443: Agonist activity at PK-tagged human GPR120 long isoform expressed in CHOK1 cells co-expressing EA-tagged beta-arrestin assessed as beta-gal enzyme complex formation after 90 mins by enzyme fragment complementation assayec500.0510uM
cis-(1R,2R)-2-[(2R)-6-[2-fluoro-3-methoxy-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid1332301: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as increase in IP1 accumulation after 60 mins by HTRF assayec500.0550uM
3-[4-[[3-chloro-5-(4-ethylphenyl)-1,2-thiazol-4-yl]methoxy]-2,3-dimethylphenyl]propanoic acid1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assayec500.0560uM
4-[4-[2-chloro-5-(trifluoromethoxy)phenyl]phenoxy]butanoic acid1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assayec500.0570uM
3-[4-[[3-(4-ethylphenyl)-5-(trifluoromethyl)-1,2-oxazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid1486912: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux by Fluo-4 NW dye based FLIPR assayec500.0570uM
4-[4-[2-fluoro-5-(3-fluorophenoxy)phenyl]phenoxy]butanoic acid1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assayec500.0600uM
3-[4-[(3,5-dimethylphenyl)methoxy]-3-methylphenyl]propanoic acid1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assayec500.0600uM
3-[3-methyl-4-[(3-methyl-5-propan-2-yloxyphenyl)methoxy]phenyl]propanoic acid1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assayec500.0600uM

CTD chemical–gene interactions

12 total (human), top 12 by PubMed support.

ChemicalActions (top 5)PubMed papers
bisphenol Fincreases methylation1
sodium arseniteincreases expression1
benzo(e)pyrenedecreases methylation1
CGP 52608affects binding, increases reaction1
abrinedecreases expression1
GW9508affects binding, increases activity, increases reaction1
Allergensdecreases expression1
Benzo(a)pyreneaffects methylation, increases methylation1
Methapyrilenedecreases methylation1
Silicon Dioxidedecreases expression1
Tretinoindecreases expression1
Endocannabinoidsincreases reaction, affects binding, increases activity1

ChEMBL screening assays

121 unique, capped per target: 71 functional, 50 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2060785FunctionalAgonist activity at GPR120 expressed in HEK 293 cells assessed as beta-arrestin recruitment after 5 mins by BRET assayDiscovery of a potent and selective GPR120 agonist. — *J Med Chem*
CHEMBL2320499BindingAgonist activity at GPR120 (unknown origin)Discovery of a potent and selective free fatty acid receptor 1 agonist with low lipophilicity and high oral bioavailability. — *J Med Chem*

Cellosaurus cell lines

8 cell lines: 5 spontaneously immortalized cell line, 2 cancer cell line, 1 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_F4SAHyCyte A-549 stable cell line for hFFAR4 overexpressionCancer cell lineMale
CVCL_H443CHO-K1/GPR120/Galpha15Spontaneously immortalized cell lineFemale
CVCL_KX25PathHunter CHO-K1 GPR120L beta-arrestinSpontaneously immortalized cell lineFemale
CVCL_KX26PathHunter CHO-K1 GPR120S beta-arrestinSpontaneously immortalized cell lineFemale
CVCL_KX27PathHunter CHO-K1 GPR120S beta-arrestin-1Spontaneously immortalized cell lineFemale
CVCL_KZ51PathHunter HEK 293 GPR120L Total GPCR InternalizationTransformed cell lineFemale
CVCL_U007CHO-GPR120Spontaneously immortalized cell lineFemale
CVCL_ZK31Tango GPR120-bla U2OSCancer cell lineFemale

Clinical trials (associated diseases)

Via MONDO — disease-level, not drug-specific.

Predicted chemistry — Sugi Predict

The predicted patent-compound landscape for FFAR4 across ~30M SureChEMBL compounds — explore on Sugi Predict.