FFAR4
gene geneOn this page
Also known as PGR4
Summary
FFAR4 (free fatty acid receptor 4, HGNC:19061) is a protein-coding gene on chromosome 10q23.33, encoding Free fatty acid receptor 4 (Q5NUL3). G protein-coupled receptor for long-chain fatty acids (LCFAs) with a major role in adipogenesis, energy metabolism and inflammation.
This gene encodes a G protein-coupled receptor (GPR) which belongs to the rhodopsin family of GPRs. The encoded protein functions as a receptor for free fatty acids, including omega-3, and participates in suppressing anti-inflammatory responses and insulin sensitizing. Multiple transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 338557 — RefSeq curated summary.
At a glance
- GWAS associations: 16
- Clinical variants (ClinVar): 64 total — 1 likely-pathogenic
- GTEx eGene: eQTL in 20 tissues, sQTL in 0 (q < 0.05)
- ChEMBL bioactivity: 8 clinical-phase molecules tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 1.03 (unconstrained)
- MANE Select transcript:
NM_001195755 - Notable: 64 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:19061 |
| Approved symbol | FFAR4 |
| Name | free fatty acid receptor 4 |
| Location | 10q23.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PGR4 |
| Ensembl gene | ENSG00000186188 |
| Ensembl biotype | protein_coding |
| OMIM | 609044 |
| Entrez | 338557 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 4 protein_coding, 1 nonsense_mediated_decay
MANE Select: ENST00000371481
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 3: 1
ENST00000371481, ENST00000371483, ENST00000604414, ENST00000944863, ENST00001001553
RefSeq mRNA: 2 — MANE Select: NM_001195755
NM_001195755, NM_181745
CCDS: CCDS31248, CCDS55720
Canonical transcript exons
ENST00000371481 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001334565 | 93576091 | 93576219 |
| ENSE00003901935 | 93587220 | 93590072 |
| ENSE00003902173 | 93566665 | 93567287 |
Expression profiles
Bgee: expression breadth ubiquitous, 132 present calls, max score 81.68.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5467 / max 95.8970, expressed in 153 samples.
Highest expression (Bgee): mucosa of sigmoid colon, mucosa of transverse colon, rectum, colonic mucosa, adenohypophysis.
Genetic regulation across tissues (GTEx eQTL / sQTL)
FFAR4 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 20 tissues and its splicing (sQTL) in 0 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
20 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Pancreas | eqtl | 3.7e-25 | -0.80 | 10:93573306:A:G |
| Adipose Subcutaneous | eqtl | 9.6e-18 | -0.27 | 10:93557908:G:C |
| Lung | eqtl | 2.7e-12 | +0.26 | 10:93573306:A:G |
| Brain Nucleus accumbens basal ganglia | eqtl | 1.3e-09 | +0.48 | 10:93687720:C:G |
| Whole Blood | eqtl | 6.4e-09 | -0.24 | 10:93515215:C:A |
| Breast Mammary Tissue | eqtl | 3.1e-07 | +0.28 | 10:93573062:C:T |
| Adipose Visceral Omentum | eqtl | 4.8e-06 | +0.18 | 10:93550782:T:C |
| Brain Frontal Cortex BA9 | eqtl | 1.4e-04 | +0.22 | 10:93573306:A:G |
| Esophagus Muscularis | eqtl | 2.1e-04 | -0.24 | 10:93516137:C:G |
| Esophagus Gastroesophageal Junction | eqtl | 8.7e-04 | -0.29 | 10:93519084:C:T |
| Brain Cortex | eqtl | 2.7e-03 | +0.20 | 10:93564746:C:A |
| Brain Caudate basal ganglia | eqtl | 4.2e-03 | +0.26 | 10:93687720:C:G |
| Spleen | eqtl | 1.0e-02 | -0.35 | 10:93526960:C:A |
| Skin Sun Exposed Lower leg | eqtl | 1.1e-02 | +0.82 | 10:93802258:G:A |
| Testis | eqtl | 1.3e-02 | +0.35 | 10:93571844:C:T |
| Brain Anterior cingulate cortex BA24 | eqtl | 2.1e-02 | -0.47 | 10:93833357:G:A |
| Brain Substantia nigra | eqtl | 2.5e-02 | -0.35 | 10:93546920:C:T |
| Artery Tibial | eqtl | 2.6e-02 | +0.29 | 10:93514704:A:G |
| Brain Putamen basal ganglia | eqtl | 2.7e-02 | +0.37 | 10:93581054:T:G |
| Nerve Tibial | eqtl | 3.4e-02 | -0.15 | 10:93550955:T:C |
FANTOM5 promoters
2 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 106283 | 0.5169 | 152 |
| 106284 | 0.0298 | 5 |
Top tissues by expression
showing 100 of 238 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of sigmoid colon | UBERON:0004993 | 81.68 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 81.35 | gold quality |
| rectum | UBERON:0001052 | 80.55 | gold quality |
| colonic mucosa | UBERON:0000317 | 80.00 | gold quality |
| adenohypophysis | UBERON:0002196 | 79.02 | gold quality |
| pituitary gland | UBERON:0000007 | 76.76 | gold quality |
| islet of Langerhans | UBERON:0000006 | 76.71 | gold quality |
| transverse colon | UBERON:0001157 | 68.53 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 65.10 | silver quality |
| adipose tissue | UBERON:0001013 | 63.89 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 63.88 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 62.98 | gold quality |
| granulocyte | CL:0000094 | 61.72 | gold quality |
| prefrontal cortex | UBERON:0000451 | 61.59 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 61.36 | gold quality |
| omental fat pad | UBERON:0010414 | 61.13 | gold quality |
| peritoneum | UBERON:0002358 | 61.07 | gold quality |
| pancreas | UBERON:0001264 | 60.72 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 60.07 | gold quality |
| large intestine | UBERON:0000059 | 59.91 | gold quality |
| right lung | UBERON:0002167 | 59.85 | gold quality |
| colonic epithelium | UBERON:0000397 | 59.82 | silver quality |
| visceral pleura | UBERON:0002401 | 59.71 | gold quality |
| pancreatic ductal cell | CL:0002079 | 59.65 | silver quality |
| right frontal lobe | UBERON:0002810 | 59.39 | gold quality |
| colon | UBERON:0001155 | 59.32 | gold quality |
| leukocyte | CL:0000738 | 59.31 | gold quality |
| monocyte | CL:0000576 | 59.24 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 58.87 | silver quality |
| middle temporal gyrus | UBERON:0002771 | 58.83 | silver quality |
| ileal mucosa | UBERON:0000331 | 58.64 | silver quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 58.47 | gold quality |
| frontal cortex | UBERON:0001870 | 57.89 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 57.49 | gold quality |
| lower lobe of lung | UBERON:0008949 | 57.39 | silver quality |
| neocortex | UBERON:0001950 | 56.90 | gold quality |
| intestine | UBERON:0000160 | 56.62 | gold quality |
| upper lobe of lung | UBERON:0008948 | 55.94 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 55.86 | gold quality |
| vermiform appendix | UBERON:0001154 | 55.08 | gold quality |
| parietal pleura | UBERON:0002400 | 54.66 | gold quality |
| cerebral cortex | UBERON:0000956 | 54.44 | gold quality |
| right testis | UBERON:0004534 | 54.41 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 54.34 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 54.23 | gold quality |
| lung | UBERON:0002048 | 54.19 | gold quality |
| gall bladder | UBERON:0002110 | 54.07 | gold quality |
| skin of hip | UBERON:0001554 | 53.94 | gold quality |
| kidney epithelium | UBERON:0004819 | 53.93 | gold quality |
| upper arm skin | UBERON:0004263 | 53.52 | gold quality |
| buccal mucosa cell | CL:0002336 | 53.38 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 53.36 | silver quality |
| body of pancreas | UBERON:0001150 | 53.26 | gold quality |
| left testis | UBERON:0004533 | 53.03 | gold quality |
| thoracic mammary gland | UBERON:0005200 | 52.39 | gold quality |
| mammary gland | UBERON:0001911 | 52.24 | gold quality |
| testis | UBERON:0000473 | 52.11 | gold quality |
| hypothalamus | UBERON:0001898 | 51.99 | gold quality |
| forebrain | UBERON:0001890 | 51.93 | gold quality |
| caecum | UBERON:0001153 | 51.76 | gold quality |
| endothelial cell | CL:0000115 | 51.55 | gold quality |
| primary visual cortex | UBERON:0002436 | 51.14 | silver quality |
| tibialis anterior | UBERON:0001385 | 50.57 | silver quality |
| myocardium | UBERON:0002349 | 50.25 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 49.33 | gold quality |
| brain | UBERON:0000955 | 49.31 | gold quality |
| upper leg skin | UBERON:0004262 | 49.20 | silver quality |
| cerebellar vermis | UBERON:0004720 | 48.93 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 48.52 | gold quality |
| occipital lobe | UBERON:0002021 | 48.30 | silver quality |
| small intestine Peyer’s patch | UBERON:0003454 | 48.03 | gold quality |
| left coronary artery | UBERON:0001626 | 47.96 | gold quality |
| small intestine | UBERON:0002108 | 47.64 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 47.52 | gold quality |
| lymph node | UBERON:0000029 | 47.37 | gold quality |
| coronary artery | UBERON:0001621 | 47.10 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 47.03 | gold quality |
| right lobe of liver | UBERON:0001114 | 47.01 | gold quality |
| quadriceps femoris | UBERON:0001377 | 46.87 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 46.86 | gold quality |
| sural nerve | UBERON:0015488 | 46.82 | gold quality |
| deltoid | UBERON:0001476 | 46.80 | gold quality |
| left adrenal gland | UBERON:0001234 | 46.77 | gold quality |
| adrenal cortex | UBERON:0001235 | 46.70 | gold quality |
| right adrenal gland | UBERON:0001233 | 46.69 | gold quality |
| skin of abdomen | UBERON:0001416 | 46.62 | gold quality |
| duodenum | UBERON:0002114 | 46.16 | gold quality |
| Ammon’s horn | UBERON:0001954 | 46.01 | gold quality |
| multicellular organism | UBERON:0000468 | 46.00 | gold quality |
| material anatomical entity | UBERON:0000465 | 45.99 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 45.94 | gold quality |
| adrenal gland | UBERON:0002369 | 45.84 | gold quality |
| zone of skin | UBERON:0000014 | 45.83 | gold quality |
| skin of leg | UBERON:0001511 | 45.74 | gold quality |
| nucleus accumbens | UBERON:0001882 | 45.60 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 45.59 | gold quality |
| anatomical system | UBERON:0000467 | 45.57 | gold quality |
| liver | UBERON:0002107 | 45.47 | silver quality |
| amygdala | UBERON:0001876 | 45.43 | gold quality |
| spinal cord | UBERON:0002240 | 45.43 | gold quality |
Single-cell (SCXA)
Detected in 7 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-125970 | yes | 19.25 |
| E-MTAB-5061 | yes | 13.49 |
| E-GEOD-81608 | yes | 7.68 |
| E-ENAD-27 | yes | 4.76 |
| E-GEOD-81547 | yes | 4.40 |
| E-MTAB-7303 | no | 5.38 |
| E-ANND-3 | no | 3.37 |
HPA expression
RNA tissue specificity: Group enriched
showing 60 of 66 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM |
|---|---|---|
| Rectum | tissue | 10.7 |
| Pituitary gland | tissue | 10.4 |
| Olfactory bulb | tissue | 9.6 |
| Prefrontal cortex | tissue | 9.3 |
| Cerebral cortex | tissue | 9.3 |
| Retrosplenial cortex | tissue | 9.3 |
| Retrosplenial and cingulate cortex | tissue | 9.2 |
| Insular cortex | tissue | 9.2 |
| Hippocampal formation | tissue | 9.1 |
| Entorhinal cortex | tissue | 9.1 |
| Cerebellum | tissue | 9.0 |
| Temporal cortex | tissue | 8.8 |
| Amygdala | tissue | 8.1 |
| Colon | tissue | 7.8 |
| Corpus callosum | tissue | 7.5 |
| Motor cortex | tissue | 7.3 |
| Occipital cortex | tissue | 7.2 |
| Ventral forebrain | tissue | 7.1 |
| Basal ganglia | tissue | 7.0 |
| Somatosensory cortex | tissue | 6.9 |
| Septum | tissue | 6.5 |
| Periaqueductal gray | tissue | 6.2 |
| Putamen | tissue | 6.1 |
| Substantia nigra | tissue | 6.0 |
| Hypothalamus | tissue | 5.4 |
| Midbrain | tissue | 4.9 |
| Medulla oblongata | tissue | 4.8 |
| Spinal cord | tissue | 4.8 |
| Superior colliculi | tissue | 4.3 |
| Thalamus | tissue | 4.1 |
| Pons | tissue | 3.9 |
| Adipose tissue | tissue | 3.8 |
| Lung | tissue | 3.4 |
| Hippocampus | tissue | 2.5 |
| Postcentral gyrus | tissue | 2.4 |
| Nucleus accumbens | tissue | 2.3 |
| Locus coeruleus | tissue | 2.3 |
| Choroid plexus | tissue | 2.2 |
| Fallopian tube | tissue | 0.9 |
| Skin 1 | tissue | 0.8 |
| Appendix | tissue | 0.6 |
| Stomach 1 | tissue | 0.5 |
| Pancreas | tissue | 0.5 |
| Testis | tissue | 0.4 |
| Liver | tissue | 0.4 |
| Small intestine | tissue | 0.4 |
| Gallbladder | tissue | 0.4 |
| Duodenum | tissue | 0.4 |
| Adrenal gland | tissue | 0.4 |
| Breast | tissue | 0.3 |
| Skeletal muscle | tissue | 0.3 |
| Lymph node | tissue | 0.2 |
| Heart muscle | tissue | 0.2 |
| Esophagus | tissue | 0.2 |
| Smooth muscle | tissue | 0.2 |
| Thymus | tissue | 0.2 |
| Retina | tissue | 0.1 |
| Salivary gland | tissue | 0.1 |
| Parathyroid gland | tissue | 0.1 |
| Urinary bladder | tissue | 0.1 |
Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — White matter (7.5), Subiculum (7.1), Ventromedial nucleus (7.1), Ventral hippocampus (6.8), Dorsal hippocampus (6.7).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting FFAR4 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 57 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-489-3P | 99.80 | 66.46 | 839 |
| HSA-MIR-4668-5P | 99.79 | 70.58 | 3782 |
| HSA-MIR-6817-3P | 99.79 | 68.35 | 2126 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-7157-5P | 99.66 | 69.33 | 1829 |
| HSA-MIR-497-3P | 99.61 | 69.71 | 1990 |
| HSA-MIR-4310 | 99.59 | 68.84 | 2527 |
| HSA-MIR-4762-5P | 99.57 | 68.54 | 1424 |
| HSA-MIR-5584-5P | 99.49 | 68.22 | 2814 |
| HSA-MIR-372-5P | 99.41 | 69.11 | 2299 |
| HSA-MIR-519D-5P | 99.41 | 69.30 | 2057 |
| HSA-MIR-5695 | 99.41 | 67.48 | 1047 |
Functional genomics
gnomAD constraint: pLI 2.43e-05, LOEUF 1.03, missense Z -0.128 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000371481 — one region, missense o/e 0.99.
Literature-anchored findings (GeneRIF, showing 40)
- possible significance of the alternate splice variant of GPR120 in human is discussed (PMID:19723586)
- These are the first results which demonstrate specific phosphorylation of GPR120 isoforms upon agonism by free fatty acids and the first which distinguish the phosphorylation profiles of the two GPR120 isoforms. (PMID:20471368)
- GPR120 may participate in human gustatory fatty acid perception. (PMID:21868624)
- agonist-stimulated GPR120S and GPR120L receptors both recruited beta-arrestin2 and underwent robust internalization. (PMID:22282525)
- GPR120 expression in adipose tissue is significantly higher in obese individuals than in lean controls; GPR120 exon sequencing in obese subjects reveals a deleterious non-synonymous mutation (p.R270H) that inhibits GPR120 signalling activity (PMID:22343897)
- Our data suggest that the combination of common genetic variations in the GPR120 gene and dietary fat intake is a possible determinant of body mass index. (PMID:23594480)
- Our results show that EPA, DHA and AA elicit the same signalling events, but with different kinetics and efficiency through GPR120 in Caco-2 cells. (PMID:23849180)
- these results demonstrate that GPR120 functions as a tumor-promoting receptor in colorectal carcinoma and, therefore, shows promise as a new potential target for cancer therapeutics. (PMID:23851494)
- this study demonstrates the expression of GPR120 in pancreas and shows the distribution of GPR120 in human and rat pancreas. (PMID:23993698)
- Free fatty acids and protein kinase C activation induce GPR120 phosphorylation. (PMID:24239485)
- Basal and heterologous phosphorylation of FFA4 is mediated by protein kinase C. (PMID:24412271)
- CD36 and GPR120 have nonoverlapping roles in taste bud cell signaling during orogustatory perception of dietary lipids; these are differentially regulated by obesity. (PMID:24412488)
- GPR120 is a nutrient sensor that is activated endogenously by both saturated and unsaturated long chain fatty acids. (PMID:24742677)
- G protein-coupled receptor 120 (GPR 120) levels are reduced in pediatric obstructive sleep apnea and obesity (particularly when both are present) and may play a role in modulating the degree of insulin resistance (PMID:24790272)
- Phosphorylation and structural elements within the C-terminal tail of FFA4 allow for the recruitment of arrestin-3. (PMID:24817122)
- GPR120 is predominantly expressed in the microvillous membrane (MVM) of placenta and the expression level of this receptor in MVM is not altered by maternal body mass index (PMID:24844436)
- detailed mode of binding of both long-chain fatty acid and synthetic agonist ligands at FFA4 by integrating molecular modeling, receptor mutagenesis, and ligand structure-activity relationship approaches in an iterative format (PMID:24860101)
- Authors show that oleic acid stimulates lipid droplet formation by activating the long-chain fatty acid receptor FFAR4, which signals through a pertussis-toxin-sensitive G-protein signalling pathway involving PI3-kinase, AKT and (PLD) activities. (PMID:24876224)
- Morbidly obese subjects had lower GPR120 mRNA and protein levels in visceral adipose tissue and a lower mRNA expression after a high-fat meal in peripheral blood mononuclear cells. (PMID:24913719)
- GPR120 may have a positive role in the management of diabetes;GPR120 activation supports metabolic homeostasis by inhibiting inflammation in macrophages and regulating glucose and/or lipid metabolism in adipose, liver, and muscle tissues (PMID:25114508)
- Characterizing pharmacological ligands to study the long-chain fatty acid receptors GPR40/FFA1 and GPR120/FFA4 (PMID:25131623)
- a significant interaction effect on alanine transaminase levels suggesting a driving effect of the PNPLA3 148M allele on liver injury in children with obesity carrying this variant. (PMID:25250621)
- TNFa decreases GLP-2 expression by up-regulating GPR120 in Crohn disease (PMID:25447053)
- Findings demonstrate the novel functional properties of GPR120 on human eosinophils and indicate the previously unrecognized link between nutrient metabolism and the immune system. (PMID:25790291)
- the low-frequency p.R270H variant which inhibits GPR120 activity might influence fasting glucose levels in a normal physiological range. (PMID:26025001)
- It promotes the secretion of glucagon-like peptide-1 (GLP-1) in the intestine, and also acts as a lipid sensor in adipose tissue to sense dietary fat and control energy balance.(review) (PMID:26028412)
- GPR120 functions as a receptor for omega-3 fatty acid, involving in regulating the secretion of gastrointestinal peptide hormone, adipogenesis, adipogenic differentiation and anti-inflammatory process. [review] (PMID:26230883)
- These results suggest that distinct effects of GPR120 and GPR40 are involved in the acquisition of malignant property in pancreatic cancer cells. (PMID:26282200)
- demonstrated a GPR120-mediated novel anti-inflammatory pathway in specific intestinal epithelial cell types that could be of therapeutic relevance to intestinal inflammatory disorders (PMID:26791484)
- Ligands for FFAR4 comprise the family of long chain polyunsaturated fatty acids, suggesting that many of the long-known beneficial effects of these fats may be receptor mediated. (Review) (PMID:26827942)
- GPR120 negatively and GPR40 positively regulate cellular functions during tumor progression in lung cancer cells. (PMID:26968637)
- P.R270H of FFAR4 impairs Gq and Gi signalling of FFAR4 in vitro. (PMID:27068006)
- p.R270H variant of GPR120 modulates the risk of type 2 diabetes in interaction with dietary fat intake. (PMID:27212621)
- Fatty acids are capable of directly acting on visceral adipocytes to modulate differently TNF-alpha, IL-6, IL-10 and adiponectin expression, with a different and greater effect in morbidly obese subjects. These effects are largely annulled when GPR120 expression was silenced, which suggests that they could be mediated by GPR120. (PMID:27299582)
- LPA1 plays a critical role in EGF responses and that FFA4 agonists inhibit proliferation by suppressing positive cross-talk between LPA1 and the EGF receptor (PMID:27474750)
- These results indicated that GPR120 enhanced and GPR40 inhibited the cell motile activity of highly migratory osteosarcoma cells. (PMID:28159555)
- G protein-coupled receptor 120 (GPR120) represents a promising target for the treatment of obesity-related metabolic disorders for its involvement in the regulation of adipogenesis, inflammation, glucose uptake, and insulin resistance. This review summarizes recent studies and advances regarding the systemic role of GPR120 in adipose tissue, including both white and brown adipocytes. [review] (PMID:28285320)
- Studied action of linoleic acid (LA) on cell migration and neoplasm invasiveness of breast cancer cells. Findings show Akt2 activation requires EGFR and PI3K activity, whereas migration and invasion are dependent on FFAR4, EGFR and PI3K/Akt activity. (PMID:28456993)
- Eicosapentaenoic acid prevents TNF-alpha-induced decrease of alpha-methylglucose uptake and AMPK phosphorylation in Caco-2 cells via GPR120 and AMPK activation. (PMID:28771713)
- Data suggest that cytokines TNFalpha and interleukin-1b markedly reduce GPR120/FFAR4 expression in adipocytes; in contrast, these cytokines induce expression of GPR84 and GPR41/FFAR3 in adipocytes. These studies were conducted in adipocytes cultured from subcutaneous adipose tissue. (GPR = G-protein coupled receptor; FFAR = free fatty acid receptor) (PMID:28835131)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Ffar4 | ENSMUSG00000054200 |
| rattus_norvegicus | Ffar4 | ENSRNOG00000021763 |
| drosophila_melanogaster | CCKLR-17D3 | FBGN0030954 |
| drosophila_melanogaster | CCKLR-17D1 | FBGN0259231 |
Paralogs (16): NPFFR2 (ENSG00000056291), GNRHR (ENSG00000109163), CCKBR (ENSG00000110148), HCRTR1 (ENSG00000121764), AVPR2 (ENSG00000126895), GALR3 (ENSG00000128310), HCRTR2 (ENSG00000137252), NPFFR1 (ENSG00000148734), CCKAR (ENSG00000163394), AVPR1A (ENSG00000166148), GALR1 (ENSG00000166573), GPR22 (ENSG00000172209), GPR150 (ENSG00000178015), OXTR (ENSG00000180914), QRFPR (ENSG00000186867), AVPR1B (ENSG00000198049)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:2147577) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 34 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| increased white adipose tissue amount | 1 |
| increased circulating LDL cholesterol level | 1 |
| abnormal lipid level | 1 |
| increased circulating HDL cholesterol level | 1 |
| abnormal gustatory system physiology | 1 |
| abnormal taste sensitivity | 1 |
| increased circulating insulin level | 1 |
| hepatic steatosis | 1 |
| increased circulating alanine transaminase level | 1 |
| abnormal white adipose tissue morphology | 1 |
| increased liver weight | 1 |
| abnormal insulin secretion | 1 |
| decreased energy expenditure | 1 |
| increased circulating cholesterol level | 1 |
| decreased oxygen consumption | 1 |
| impaired glucose tolerance | 1 |
| insulin resistance | 1 |
| increased circulating glucose level | 1 |
| increased susceptibility to diet-induced obesity | 1 |
| increased circulating leptin level | 1 |
| abnormal white adipose tissue physiology | 1 |
| decreased physiological sensitivity to xenobiotic | 1 |
| abnormal pancreatic somatostatin secretion | 1 |
| increased white fat cell size | 1 |
| enlarged pancreatic islets | 1 |
+9 more (showing top 25).
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Macaca fascicularis | C8YUV0 | 97.8% | Diamond |
| Sus scrofa | A0A287A2K5 | 94.9% | Diamond |
| Bos taurus | P79266 | 94.9% | Diamond |
| Canis lupus familiaris | P30552 | 91.2% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| MYOF | protein-coding | 26509 |
| CEP55 | protein-coding | 55165 |
| RBP4 | protein-coding | 5950 |
| PDE6C | protein-coding | 5146 |
| FRA10AC1 | protein-coding | 118924 |
Protein
Protein identifiers
Free fatty acid receptor 4 — Q5NUL3 (reviewed: Q5NUL3)
Alternative names: G protein-coupled receptor 120, G protein-coupled receptor 129, G protein-coupled receptor GT01, G protein-coupled receptor PGR4, Omega-3 fatty acid receptor 1
All UniProt accessions (2): Q5NUL3, S4R3L2
UniProt curated annotations — full annotation on UniProt →
Function. G protein-coupled receptor for long-chain fatty acids (LCFAs) with a major role in adipogenesis, energy metabolism and inflammation. Signals via G protein and beta-arrestin pathways. LCFAs sensing initiates activation of phosphoinositidase C-linked G proteins GNAQ and GNA11 (G(q)/G(11)), inducing a variety of cellular responses via second messenger pathways such as intracellular calcium mobilization, modulation of cyclic adenosine monophosphate (cAMP) production, and mitogen-activated protein kinases (MAPKs). After LCFAs binding, associates with beta-arrestin ARRB2 that acts as an adapter protein coupling the receptor to specific downstream signaling pathways, as well as mediating receptor endocytosis. In response to dietary fats, plays an important role in the regulation of adipocyte proliferation and differentiation. Acts as a receptor for omega-3 polyunsaturated fatty acids (PUFAs) at primary cilium of perivascular preadipocytes, initiating an adipogenic program via cAMP and CTCF-dependent chromatin remodeling that ultimately results in transcriptional activation of adipogenic genes and cell cycle entry. Induces differentiation of brown adipocytes probably via autocrine and endocrine functions of FGF21 hormone. Activates brown adipocytes by initiating intracellular calcium signaling that leads to mitochondrial depolarization and fission, and overall increased mitochondrial respiration. Consequently stimulates fatty acid uptake and oxidation in mitochondria together with UCP1-mediated thermogenic respiration, eventually reducing fat mass. Regulates bi-potential differentiation of bone marrow mesenchymal stem cells toward osteoblasts or adipocytes likely by up-regulating distinct integrins. In response to dietary fats regulates hormone secretion and appetite. Stimulates GIP and GLP1 secretion from enteroendocrine cells as well as GCG secretion in pancreatic alpha cells, thereby playing a role in the regulation of blood glucose levels. Negatively regulates glucose-induced SST secretion in pancreatic delta cells. Mediates LCFAs inhibition of GHRL secretion, an appetite-controlling hormone. In taste buds, contributes to sensing of dietary fatty acids by the gustatory system. During the inflammatory response, promotes anti-inflammatory M2 macrophage differentiation in adipose tissue. Mediates the anti-inflammatory effects of omega-3 PUFAs via inhibition of NLRP3 inflammasome activation. In this pathway, interacts with adapter protein ARRB2 and inhibits the priming step triggered by Toll-like receptors (TLRs) at the level of TAK1 and TAB1. Further inhibits the activation step when ARRB2 directly associates with NLRP3, leading to inhibition of pro-inflammatory cytokine release. Mediates LCFAs anti-apoptotic effects. Mediates VLCFAs-dependent liver-to-adipose tissue signaling and adipose tissue thermogenesis. Receptor for LCFAs decoupled from G protein signaling. May signal through beta-arrestin pathway. After LCFAs binding, associates with beta-arrestin ARRB2 that may act as an adapter protein coupling the receptor to specific downstream signaling pathways, as well as mediating receptor endocytosis.
Subunit / interactions. Interacts (via C-terminus) with ARRB2 following LCFAs stimulation. Interacts (via C-terminus) with ARRB2 following LCFAs stimulation.
Subcellular location. Cell membrane. Endosome membrane. Lysosome membrane Cell membrane. Lysosome membrane. Cell projection. Cilium membrane.
Tissue specificity. The predominant isoform in human tissues. Expressed in adipose tissue, pancreatic islets, lung and brain. Expressed in alpha cells of pancreatic islets. Expressed in primary cilia of perivascular preadipocytes of white adipose tissue (at protein level). Abundant expression in the intestinal tract. Expressed in colonic intraepithelial neuroendocrine cells.
Post-translational modifications. Phosphorylated at two clusters of Ser and Thr residues located in the intracellular C-terminus, a prerequisite for FFAR4 internalization via an ARRB2-dependent pathway.
Polymorphism. Genetic variations in FFAR4 define the body mass index quantitative trait locus 10 (BMIQ10) [MIM:607514]. Variance in body mass index is a susceptibility factor for obesity.
Similarity. Belongs to the G protein-coupled receptor 1 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q5NUL3-2 | 2 | yes |
| Q5NUL3-1 | 1 |
RefSeq proteins (2): NP_001182684, NP_859529 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (54 total): helix 14, topological domain 8, transmembrane region 7, modified residue 5, turn 5, mutagenesis site 3, sequence conflict 3, strand 3, sequence variant 2, chain 1, glycosylation site 1, disulfide bond 1, splice variant 1
Structure
Experimental structures (PDB)
16 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 8G59 | Cryo-EM structure of the TUG891 bound GPR120-Giq complex | ELECTRON MICROSCOPY | 2.64 |
| 24XB | Cryo-EM Structure of the Apo FFAR4-Gq Complex | ELECTRON MICROSCOPY | 2.65 |
| 24QH | Cryo-EM Structure of the FFAR4-Gi complex with unknown density | ELECTRON MICROSCOPY | 2.74 |
| 8ID6 | Cryo-EM structure of the oleic acid bound GPR120-Gi complex | ELECTRON MICROSCOPY | 2.8 |
| 8IYS | TUG891-bound FFAR4 in complex with Gq | ELECTRON MICROSCOPY | 2.95 |
| 9XFI | Cryo-EM structure of the Bavachalcone bound FFAR4-Giq complex | ELECTRON MICROSCOPY | 2.99 |
| 8ID8 | Cryo-EM structure of the TUG891 bound GPR120-Gi complex | ELECTRON MICROSCOPY | 3 |
| 8ID9 | Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi complex | ELECTRON MICROSCOPY | 3 |
| 8H4I | DHA-bound FFAR4 in complex with Gs | ELECTRON MICROSCOPY | 3.06 |
| 8T3O | Cryo-EM structure of the TUG-891 bound FFA4-Gq complex | ELECTRON MICROSCOPY | 3.06 |
| 8H4L | DHA-bound FFAR4 in complex with Gq | ELECTRON MICROSCOPY | 3.07 |
| 8H4K | GW9508-bound FFAR4 in complex with Gq | ELECTRON MICROSCOPY | 3.1 |
| 8ID3 | Cryo-EM structure of the 9-hydroxystearic acid bound GPR120-Gi complex | ELECTRON MICROSCOPY | 3.1 |
| 8ID4 | Cryo-EM structure of the linoleic acid bound GPR120-Gi complex | ELECTRON MICROSCOPY | 3.1 |
| 8T3Q | Cryo-EM structure of the DHA bound FFA4-Gq complex | ELECTRON MICROSCOPY | 3.14 |
| 9XFJ | Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement) | ELECTRON MICROSCOPY | 3.25 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q5NUL3-F1 | 79.16 | 0.46 |
Antibody-complex structures (SAbDab)
12 antibodies co-crystallized with this protein: 8G59, 8H4I, 8H4K, 8H4L, 8ID3, 8ID4, 8ID6, 8ID8, 8ID9, 8IYS, 8T3O, 8T3Q
Human Protein Atlas
Protein class: Transporters, G-protein coupled receptors, GPCRs excl olfactory receptors, Predicted membrane proteins, GPCRHMM predicted membrane proteins, FDA approved drug targets, Biotech drugs, Human disease related genes
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): plasma membrane; basal body; vesicles
Antibody reliability (HPA): IF supported
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (5)
| Type | Positions |
|---|---|
| Phosphothreonine | 347, 349 |
| Phosphoserine | 350, 357, 360 |
Disulfide bonds (1)
| Type | Positions |
|---|---|
| Disulfide bond | 111–194 |
Glycosylation sites (1)
| Type | Positions |
|---|---|
| N-linked (glcnac…) asparagine | 21 |
Mutagenesis-validated functional residues (3)
| Position | Phenotype |
|---|---|
| 99 | impairs lcfa-induced intracellular calcium release. |
| 178 | has no effect on lcfa-induced intracellular calcium release. |
| 347–360 | impairs lcfa-mediated phosphorylation and interaction with arrb2. |
Function
Pathways and Gene Ontology
Reactome pathways
2 curated (TAS) of 11; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
11 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-416476 | G alpha (q) signalling events | curated |
| R-HSA-381771 | Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1) | curated |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) | — |
| R-HSA-444209 | Free fatty acid receptors | electronic |
| R-HSA-388396 | GPCR downstream signalling | — |
| R-HSA-500792 | GPCR ligand binding | — |
| R-HSA-400508 | Incretin synthesis, secretion, and inactivation | — |
| R-HSA-392499 | Metabolism of proteins | — |
| R-HSA-2980736 | Peptide hormone metabolism | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-372790 | Signaling by GPCR | — |
MSigDB gene sets: 184 (showing top):
GSE45365_NK_CELL_VS_CD8_TCELL_DN, GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_UP, GOBP_CARBOHYDRATE_TRANSPORT, GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, BENPORATH_ES_WITH_H3K27ME3, GOBP_NEGATIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION, GOBP_INFLAMMATORY_RESPONSE, GOCC_VACUOLAR_MEMBRANE, GOBP_POSITIVE_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOBP_WHITE_FAT_CELL_DIFFERENTIATION, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_NEGATIVE_REGULATION_OF_PEPTIDE_SECRETION, GOBP_OSTEOBLAST_DIFFERENTIATION, GOBP_SENSORY_PERCEPTION_OF_CHEMICAL_STIMULUS
GO Biological Process (24): negative regulation of cytokine production (GO:0001818), inflammatory response (GO:0006954), G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), positive regulation of cytosolic calcium ion concentration (GO:0007204), regulation of D-glucose transmembrane transport (GO:0010827), negative regulation of interleukin-1 beta production (GO:0032691), ghrelin secretion (GO:0036321), negative regulation of apoptotic process (GO:0043066), positive regulation of osteoblast differentiation (GO:0045669), hormone secretion (GO:0046879), negative regulation of inflammatory response (GO:0050728), white fat cell differentiation (GO:0050872), brown fat cell differentiation (GO:0050873), positive regulation of glucagon secretion (GO:0070094), positive regulation of ERK1 and ERK2 cascade (GO:0070374), negative regulation of somatostatin secretion (GO:0090275), positive regulation of brown fat cell differentiation (GO:0090336), positive regulation of cold-induced thermogenesis (GO:0120162), signal transduction (GO:0007165), cell differentiation (GO:0030154), fat cell differentiation (GO:0045444), detection of chemical stimulus involved in sensory perception of taste (GO:0050912)
GO Molecular Function (6): G protein-coupled receptor activity (GO:0004930), fatty acid binding (GO:0005504), taste receptor activity (GO:0008527), arrestin family protein binding (GO:1990763), protein binding (GO:0005515), lipid binding (GO:0008289)
GO Cellular Component (7): lysosomal membrane (GO:0005765), plasma membrane (GO:0005886), cilium (GO:0005929), endosome membrane (GO:0010008), endocytic vesicle (GO:0030139), ciliary membrane (GO:0060170), membrane (GO:0016020)
Reactome top-level categories
8 top-level categories:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| Incretin synthesis, secretion, and inactivation | 1 |
| GPCR downstream signalling | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
| Metabolism of proteins | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Peptide hormone metabolism | 1 |
GO top-level categories
showing 60 of 66 GO namespaces:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 2 |
| fat cell differentiation | 2 |
| transmembrane signaling receptor activity | 2 |
| binding | 2 |
| bounding membrane of organelle | 2 |
| cytokine production | 1 |
| regulation of cytokine production | 1 |
| negative regulation of gene expression | 1 |
| negative regulation of multicellular organismal process | 1 |
| defense response | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| phospholipase C activator activity | 1 |
| regulation of biological quality | 1 |
| regulation of transmembrane transport | 1 |
| D-glucose transmembrane transport | 1 |
| interleukin-1 beta production | 1 |
| regulation of interleukin-1 beta production | 1 |
| negative regulation of interleukin-1 production | 1 |
| peptide hormone secretion | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| osteoblast differentiation | 1 |
| positive regulation of cell differentiation | 1 |
| regulation of osteoblast differentiation | 1 |
| hormone transport | 1 |
| signal release | 1 |
| inflammatory response | 1 |
| negative regulation of defense response | 1 |
| negative regulation of response to external stimulus | 1 |
| regulation of inflammatory response | 1 |
| glucagon secretion | 1 |
| regulation of glucagon secretion | 1 |
| positive regulation of peptide hormone secretion | 1 |
| positive regulation of MAPK cascade | 1 |
| ERK1 and ERK2 cascade | 1 |
| regulation of ERK1 and ERK2 cascade | 1 |
| somatostatin secretion | 1 |
| regulation of somatostatin secretion | 1 |
| negative regulation of peptide hormone secretion | 1 |
| positive regulation of fat cell differentiation | 1 |
| brown fat cell differentiation | 1 |
| regulation of brown fat cell differentiation | 1 |
| positive regulation of multicellular organismal process | 1 |
| cold-induced thermogenesis | 1 |
| regulation of cold-induced thermogenesis | 1 |
| lipid binding | 1 |
| monocarboxylic acid binding | 1 |
| detection of chemical stimulus involved in sensory perception of taste | 1 |
| protein binding | 1 |
| lysosome | 1 |
| lytic vacuole membrane | 1 |
| membrane | 1 |
| cell periphery | 1 |
| intraciliary transport particle | 1 |
| membrane-bounded organelle | 1 |
| plasma membrane bounded cell projection | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 9 of 37 annotations. The rest are phylogenetic / computational / electronic (IEA).
9 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| negative regulation of interleukin-1 beta production | BP | mutant phenotype |
| phospholipase C-activating G protein-coupled receptor signaling pathway | BP | mutant phenotype |
| positive regulation of cytosolic calcium ion concentration | BP | direct assay |
| white fat cell differentiation | BP | direct assay |
| cilium | CC | direct assay |
| endosome membrane | CC | direct assay |
| lysosomal membrane | CC | direct assay |
| plasma membrane | CC | direct assay |
| arrestin family protein binding | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 954 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FFAR4 | FFAR1 | O14842 | 891 |
| FFAR4 | TAS1R3 | Q7RTX0 | 791 |
| FFAR4 | FFAR2 | O15552 | 787 |
| FFAR4 | FFAR3 | O14843 | 779 |
| FFAR4 | TAS1R2 | Q8TE23 | 775 |
| FFAR4 | GPR119 | Q8TDV5 | 773 |
| FFAR4 | PYY | P10082 | 731 |
| FFAR4 | GPR84 | Q9NQS5 | 725 |
| FFAR4 | SLC5A1 | P13866 | 701 |
| FFAR4 | GCG | P01275 | 679 |
| FFAR4 | MC3R | P41968 | 677 |
| FFAR4 | GLP1R | P43220 | 668 |
| FFAR4 | PCSK1 | P29120 | 661 |
| FFAR4 | GLP2R | O95838 | 659 |
| FFAR4 | FTO | Q9C0B1 | 653 |
IntAct
Human interaction partners of FFAR4 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
3 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| RAMP1 | physical association | 0.400 | 1 |
| RAMP2 | physical association | 0.400 | 1 |
| RAMP3 | physical association | 0.400 | 1 |
SIGNOR signaling
9 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| FFAR4 | “up-regulates activity” | GNAS | binding |
| FFAR4 | “up-regulates activity” | GNAL | binding |
| FFAR4 | “up-regulates activity” | GNAI1 | binding |
| FFAR4 | “up-regulates activity” | GNAI3 | binding |
| FFAR4 | “up-regulates activity” | GNAO1 | binding |
| FFAR4 | “up-regulates activity” | GNAZ | binding |
| FFAR4 | “up-regulates activity” | GNAQ | binding |
| FFAR4 | “up-regulates activity” | GNA14 | binding |
| “3-(4-{[5-Fluoro-2-(4-methylphenyl)phenyl]methoxy}phenyl)propanoic acid” | “up-regulates activity” | FFAR4 | “chemical activation” |
Disease & clinical
Genetic variants
Variant evidence for FFAR4: 64 ClinVar records (1 pathogenic / likely pathogenic); 16 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
64 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 1 |
| Uncertain significance | 50 |
| Likely benign | 6 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 13068 | NM_006744.4(RBP4):c.278G>A (p.Gly93Asp) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
Per-variant reference — Sugi Variant
Explore FFAR4’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 27 predictions of 201):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 10:93576220–93576221 | donor_loss | 1.0000 | 4 |
| 10:93576089–93576090 | acceptor_loss | 0.9900 | 6 |
| 10:93576220 | donor_loss | 0.9900 | |
| 10:93567288–93567289 | donor_loss | 0.9800 | 5 |
| 10:93576086 | acceptor_gain | 0.9800 | |
| 10:93587218–93587219 | acceptor_loss | 0.9800 | 6 |
| 10:93567289 | donor_loss | 0.9600 | |
| 10:93576221 | donor_loss | 0.9600 | |
| 10:93587217 | acceptor_loss | 0.9500 | |
| 10:93576082 | acceptor_gain | 0.9400 |
AlphaMissense
702 missense substitutions predicted likely pathogenic (of 2,313 scored), across 204 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D85 | 8 | 0.962 | 0.980 |
| N58 | 8 | 0.905 | 0.985 |
| F88 | 8 | 0.894 | 0.970 |
| N317 | 8 | 0.889 | 0.976 |
| D259 | 8 | 0.814 | 0.887 |
| C194 | 7 | 0.982 | 0.991 |
| W104 | 7 | 0.974 | 0.993 |
| C111 | 7 | 0.973 | 0.988 |
| W198 | 7 | 0.962 | 0.994 |
| F25 | 7 | 0.956 | 0.984 |
| W277 | 7 | 0.945 | 0.992 |
| F177 | 7 | 0.937 | 0.979 |
| W207 | 7 | 0.935 | 0.983 |
| F27 | 7 | 0.933 | 0.979 |
| F28 | 7 | 0.932 | 0.968 |
| F273 | 7 | 0.922 | 0.992 |
| E43 | 7 | 0.904 | 0.958 |
| W163 | 7 | 0.896 | 0.984 |
| F303 | 7 | 0.883 | 0.939 |
| S133 | 7 | 0.872 | 0.995 |
HPA cancer prognostics
RNA cancer specificity: Cancer enhanced (Colon Adenocarcinoma, Rectum Adenocarcinoma)
Disease associations
OMIM: gene MIM:609044 | disease phenotypes: MIM:615147
GenCC curated gene-disease
Mondo (1): progressive retinal dystrophy due to retinol transport defect (MONDO:0014060)
Orphanet (1): Progressive retinal dystrophy due to retinol transport defect (Orphanet:352718)
GWAS associations
16 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST010244_84 | Triglyceride levels | 2e-23 |
| GCST010242_201 | HDL cholesterol levels | 2e-16 |
| GCST90020025_1071 | Waist-to-hip ratio adjusted for BMI | 8e-15 |
| GCST90020027_597 | Waist-hip index | 1e-14 |
| GCST90020024_819 | A body shape index | 7e-13 |
| GCST90020025_1069 | Waist-to-hip ratio adjusted for BMI | 7e-11 |
| GCST90020027_595 | Waist-hip index | 7e-11 |
| GCST90020025_1070 | Waist-to-hip ratio adjusted for BMI | 1e-10 |
| GCST90020027_576 | Waist-hip index | 1e-10 |
| GCST90020027_596 | Waist-hip index | 1e-10 |
| GCST90020025_1067 | Waist-to-hip ratio adjusted for BMI | 2e-10 |
| GCST90020029_1491 | Waist circumference adjusted for body mass index | 2e-10 |
| GCST90020027_577 | Waist-hip index | 7e-10 |
| GCST90020025_1068 | Waist-to-hip ratio adjusted for BMI | 1e-9 |
| GCST90002405_537 | Reticulocyte count | 2e-9 |
| GCST009174_2 | Response to (pegylated) interferon in chronic hepatitis B | 1e-6 |
EFO canonical traits (from GWAS)
6 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0007859 | response to interferon |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004530 | triglyceride measurement |
| EFO:0007986 | reticulocyte count |
| EFO:0007789 | BMI-adjusted waist circumference |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5339 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 396,972 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
8 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1200517 | DIHYDROERGOTAMINE MESYLATE | 4 | 2,721 |
| CHEMBL502182 | ELAGOLIX SODIUM | 4 | 219 |
| CHEMBL1707 | LOPERAMIDE HYDROCHLORIDE | 4 | 59,642 |
| CHEMBL1722209 | TOLTERODINE TARTRATE | 4 | 3,939 |
| CHEMBL344159 | TOLVAPTAN | 4 | 3,719 |
| CHEMBL9506 | DEVAZEPIDE | 2 | 613 |
| CHEMBL267476 | LINOLEIC ACID | 2 | 325,752 |
| CHEMBL419667 | RELCOVAPTAN | 2 | 367 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Free fatty acid receptors
Most potent curated ligand interactions (11 total), top 11:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound A [PMID 24997608] | Agonist | 7.62 | pEC50 |
| TUG-891 | Full agonist | 7.0 | pEC50 |
| TUG-1197 | Agonist | 6.63 | pEC50 |
| NCG21 | Full agonist | 5.92 | pEC50 |
| linoleic acid | Full agonist | 5.89 | pEC50 |
| α-linolenic acid | Full agonist | 5.5 | pEC50 |
| GW9508 | Partial agonist | 5.46 | pEC50 |
| myristic acid | Full agonist | 5.2 | pEC50 |
| grifolic acid methyl ether | Partial agonist | 5.01 | pA2 |
| grifolic acid | Partial agonist | 4.95 | pA2 |
| oleic acid | Full agonist | 4.7 | pEC50 |
Binding affinities (BindingDB)
772 measured of 896 human assays (926 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL4859651 | EC50 | 0.04 nM | |
| CHEMBL4847662 | EC50 | 0.417 nM | |
| CHEMBL4637969 | EC50 | 6 nM | |
| CHEMBL4646784 | EC50 | 6 nM | |
| CHEMBL2164239 | EC50 | 9.33 nM | |
| 3-(4(2’-Methylbiphenyl-3-ylmethylamino)phenyl)propanoic acid | EC50 | 11 nM | |
| 3-{4-[(2’,6’-Dimethylbiphenyl-3-yl)methoxy]-2-fluorophenyl}propanoic Acid | EC50 | 14 nM | |
| CHEMBL2164242 | EC50 | 14 nM | |
| 3-{4-[(2’-Methylbiphenyl-3-yl)methoxy]phenyl}propanic Acid | EC50 | 16.6 nM | |
| CHEMBL2386363 | EC50 | 17 nM | |
| CHEMBL2163924 | EC50 | 17.4 nM | |
| CHEMBL2164241 | EC50 | 17.8 nM | |
| CHEMBL2386355 | EC50 | 18 nM | |
| CHEMBL2386364 | EC50 | 18 nM | |
| CHEMBL2386353 | EC50 | 19 nM | |
| CHEMBL3785637 | EC50 | 20 nM | |
| CHEMBL2315528 | EC50 | 20 nM | |
| CHEMBL5268316 | EC50 | 20 nM | |
| CHEMBL2386362 | EC50 | 22 nM | |
| CHEMBL2164240 | EC50 | 23.4 nM | |
| CHEMBL4162566 | EC50 | 31 nM | |
| CHEMBL3288346 | EC50 | 32 nM | |
| 3-(4-(o-Tolylethynyl)phenyl)propanoic acid | EC50 | 32 nM | |
| CHEMBL2386361 | EC50 | 33 nM | |
| CHEMBL4161536 | EC50 | 34 nM | |
| 3-{4-[(3-Phenoxybenzyl)oxy]phenyl}propanoic Acid | EC50 | 34 nM | |
| CHEMBL2386359 | EC50 | 35 nM | |
| CHEMBL3785764 | EC50 | 37 nM | |
| CHEMBL2386365 | EC50 | 38 nM | |
| CHEMBL4212409 | EC50 | 40 nM | |
| CHEMBL4209308 | EC50 | 43 nM | |
| CHEMBL4639009 | EC50 | 45 nM | |
| CHEMBL3787072 | EC50 | 48 nM | |
| CHEMBL4091723 | EC50 | 50 nM | |
| CHEMBL5272316 | EC50 | 50 nM | |
| CHEMBL4205429 | EC50 | 50 nM | |
| CHEMBL4159180 | EC50 | 51 nM | |
| CHEMBL3963542 | EC50 | 55 nM | |
| CHEMBL4086174 | EC50 | 57 nM | |
| CHEMBL3600993 | EC50 | 58 nM | |
| Trans-(2-((2′-fluoro-5′-isopropoxy-[1,1′-biphenyl]-4-yl)methyl)cyclopropyl)acetic acid (Enantiomer 2) | EC50 | 60 nM | US-9938222: Cyclopropanecarboxylic acid GPR120 modulators |
| CHEMBL4646553 | EC50 | 61 nM | |
| (1R)-2-[[2-fluoro-4-[2-fluoro-5-(3-fluorophenoxy)phenyl]phenoxy]methyl]cyclopropane-1-carboxylic acid | EC50 | 70 nM | US-9938222: Cyclopropanecarboxylic acid GPR120 modulators |
| CHEMBL4164509 | EC50 | 71 nM | |
| CHEMBL4642324 | EC50 | 71 nM | |
| CHEMBL2386354 | EC50 | 74 nM | |
| CHEMBL4169851 | EC50 | 75 nM | |
| CHEMBL1773254 | EC50 | 75.9 nM | |
| CHEMBL3926143 | EC50 | 77 nM | |
| (1R,2R)-2-(((2′,3-Difluoro-5′-phenoxy-[1,1′-biphenyl]-4-yl)oxy)methyl) cyclopropanecarboxylic acid (Enantiomer 1; absolute stereochemistry drawn in an arbitrary manner) | EC50 | 80 nM | US-9938222: Cyclopropanecarboxylic acid GPR120 modulators |
ChEMBL bioactivities
1212 potent at pChembl≥5 of 1312 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
567 with measured affinity, of 1436 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-[(2R)-6-[3-fluoro-4-methoxy-6-(3-methoxycyclobutyl)oxy-2-pyridinyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0050 | uM |
| 2-(3-ethynyl-5-pyridin-3-yloxyphenyl)-3H-1,2-benzothiazole 1,1-dioxide | 1924330: Agonist activity at human GPR120 expressed in CHO-K1 cells by beta-arrestin assay | ec50 | 0.0053 | uM |
| 3-[(2R)-6-[3-chloro-2-fluoro-5-[(5-methyl-1,3-thiazol-2-yl)oxy]phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0056 | uM |
| (3S)-3-cyclopropyl-3-[4-[[5-(2-fluoro-5-methoxyphenyl)-6-(3,3,3-trifluoropropoxy)pyrazin-2-yl]methoxy]phenyl]propanoic acid | 1662190: Agonist activity at GPR120 (unknown origin) | ec50 | 0.0060 | uM |
| 3-[4-[2-[2-(cyanomethyl)phenyl]ethynyl]-2-fluorophenyl]propanoic acid | 2087778: Agonist activity at human GPR120 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | ec50 | 0.0060 | uM |
| 3-[3-chloro-4-[[6-(cyclopropylmethylsulfanyl)-2-pyridinyl]methoxy]phenyl]propanoic acid | 1662190: Agonist activity at GPR120 (unknown origin) | ec50 | 0.0060 | uM |
| 3-[(2R)-6-(6-cyclobutyloxy-3-fluoro-4-methoxy-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0062 | uM |
| cis-(1R,2R)-2-[(2R)-6-(6-cyclobutyloxy-3-fluoro-4-methoxy-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0078 | uM |
| cis-(1R,2R)-2-[(2R)-6-(5-cyclobutyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0080 | uM |
| 3-[(2R)-6-(3-chloro-5-cyclobutyloxy-2-fluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0083 | uM |
| 3-[(2R)-6-(5-cyclobutyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0090 | uM |
| 3-[(2R)-6-(5-cyclobutyloxy-2-fluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0100 | uM |
| 3-[(2R)-6-[2-fluoro-3-methoxy-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0110 | uM |
| 3-[(2R)-6-[2-fluoro-3-methoxy-5-[(5-methyl-1,3-thiazol-2-yl)oxy]phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0130 | uM |
| 3-[(2R)-6-(5-cyclobutyloxy-2,3-difluorophenyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0130 | uM |
| 3-[5-[2-fluoro-5-(trifluoromethoxy)phenyl]-1-benzofuran-2-yl]propanoic acid | 1335045: Agonist activity at human GPR120 assessed as induction of beta-arrestin recruitment | ec50 | 0.0160 | uM |
| 3-[(2R)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0170 | uM |
| 3-[(2R)-6-[3-chloro-2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0170 | uM |
| cis-(1R,2R)-2-[(2R)-6-[2,3-difluoro-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0170 | uM |
| 4-[2,6-difluoro-4-[2-fluoro-5-(trifluoromethoxy)phenyl]phenoxy]butanoic acid | 1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assay | ec50 | 0.0200 | uM |
| 3-[(2R)-6-(6-cyclobutyloxy-3-fluoro-2-pyridinyl)-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0210 | uM |
| 3-[(2R)-6-[3,4-difluoro-6-(3-methoxycyclobutyl)oxy-2-pyridinyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0240 | uM |
| 3-[4-[[3-(4-chloro-3-fluorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0250 | uM |
| 3-[3-bromo-4-[[3-(4-chlorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]phenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0310 | uM |
| 5-[2-[(2R)-6-(5-cyclopropyloxy-2-fluoro-3-methoxyphenyl)-3,4-dihydro-2H-chromen-2-yl]ethyl]-2H-tetrazole | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0320 | uM |
| cis-(1R,2R)-2-[(2R)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0330 | uM |
| 3-[4-[[3-(4-ethylphenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0340 | uM |
| 2-(3-chloro-5-pyridin-2-yloxyphenyl)-3H-1,2-benzothiazole 1,1-dioxide | 1321312: Agonist activity at human FFA4 expressed in human Flp-In T-REx293 cells by Fura2-AM dye based calcium mobilization assay | ec50 | 0.0389 | uM |
| 3-[3-methyl-4-[(3-methyl-5-phenoxyphenyl)methoxy]phenyl]propanoic acid | 1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assay | ec50 | 0.0398 | uM |
| 3-[4-[[1-(4-ethylphenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]-2,3-difluorophenyl]propanoic acid | 1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assay | ec50 | 0.0400 | uM |
| 3-[(2S)-6-[2-fluoro-5-(trifluoromethoxy)phenyl]-3,4-dihydro-2H-chromen-2-yl]propanoic acid | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0420 | uM |
| 3-[4-[[3-(4-chloro-2-fluorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0420 | uM |
| 5-[2-[(2R)-6-[2-fluoro-3-methoxy-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]ethyl]-2H-tetrazole | 1332302: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as beta-arrestin recruitment after 90 mins by luminescence assay | ec50 | 0.0430 | uM |
| 3-[4-[[1-(4-chlorophenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]-3,5-difluorophenyl]propan-1-ol | 1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assay | ec50 | 0.0430 | uM |
| 3-[4-[[5-fluoro-2-(4-methylphenyl)phenyl]methoxy]phenyl]propanoic acid | 673111: Agonist activity at GPR120 expressed in HEK 293 cells assessed as beta-arrestin recruitment after 5 mins by BRET assay | ec50 | 0.0437 | uM |
| 3-[8-(2-chloro-5-cyclobutyloxyphenyl)-8-azaspiro[4.5]decan-3-yl]propanoic acid | 1662190: Agonist activity at GPR120 (unknown origin) | ec50 | 0.0448 | uM |
| 4-[4-[[2-(5,6,7,8-tetrahydronaphthalen-2-yl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid | 1924333: Agonist activity at human GPR120 expressed in CHO-K1 cells by BRET assay | ec50 | 0.0500 | uM |
| 4-[4-[[2-(4-cyclopropylphenyl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid | 1662190: Agonist activity at GPR120 (unknown origin) | ec50 | 0.0500 | uM |
| 4-[4-[[2-(4-methylphenyl)cyclohexen-1-yl]methoxy]phenyl]butanoic acid | 1924333: Agonist activity at human GPR120 expressed in CHO-K1 cells by BRET assay | ec50 | 0.0500 | uM |
| 3-[3,5-difluoro-4-[[1-(4-methylphenyl)-3-(trifluoromethyl)pyrrol-2-yl]methoxy]phenyl]propanoic acid | 1374591: Agonist activity at recombinant human GPR120 short isoform expressed in HEK293 cells assessed as intracellular calcium flux measured for 300 secs at 1 sec time interval by Fluo-4 NW based FLIPR assay | ec50 | 0.0500 | uM |
| 3-[4-[(2-bromo-5-methylphenyl)methoxy]-3-methylphenyl]propanoic acid | 1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assay | ec50 | 0.0501 | uM |
| 3-[4-[[3-(4-chlorophenyl)-5-(trifluoromethyl)-1,2-thiazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0510 | uM |
| 3-[3,5-difluoro-4-[[5-(trifluoromethyl)-3-[4-(trifluoromethyl)phenyl]-1,2-thiazol-4-yl]methoxy]phenyl]propanoic acid | 1502443: Agonist activity at PK-tagged human GPR120 long isoform expressed in CHOK1 cells co-expressing EA-tagged beta-arrestin assessed as beta-gal enzyme complex formation after 90 mins by enzyme fragment complementation assay | ec50 | 0.0510 | uM |
| cis-(1R,2R)-2-[(2R)-6-[2-fluoro-3-methoxy-5-(3-methoxycyclobutyl)oxyphenyl]-3,4-dihydro-2H-chromen-2-yl]cyclopropane-1-carboxylic acid | 1332301: Agonist activity at human GPR120 short isoform expressed in CHOK1 cells assessed as increase in IP1 accumulation after 60 mins by HTRF assay | ec50 | 0.0550 | uM |
| 3-[4-[[3-chloro-5-(4-ethylphenyl)-1,2-thiazol-4-yl]methoxy]-2,3-dimethylphenyl]propanoic acid | 1502442: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux incubated for 30 mins measured for 300 secs at 1 sec interval by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0560 | uM |
| 4-[4-[2-chloro-5-(trifluoromethoxy)phenyl]phenoxy]butanoic acid | 1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assay | ec50 | 0.0570 | uM |
| 3-[4-[[3-(4-ethylphenyl)-5-(trifluoromethyl)-1,2-oxazol-4-yl]methoxy]-3,5-difluorophenyl]propanoic acid | 1486912: Agonist activity at human GPR120 short splice variant expressed in HEK293 cells assessed as increase in intracellular calcium flux by Fluo-4 NW dye based FLIPR assay | ec50 | 0.0570 | uM |
| 4-[4-[2-fluoro-5-(3-fluorophenoxy)phenyl]phenoxy]butanoic acid | 1328635: Agonist activity at human GPR120 expressed in CHOK1 cells measured after 60 mins by IP1-HTRF assay | ec50 | 0.0600 | uM |
| 3-[4-[(3,5-dimethylphenyl)methoxy]-3-methylphenyl]propanoic acid | 1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assay | ec50 | 0.0600 | uM |
| 3-[3-methyl-4-[(3-methyl-5-propan-2-yloxyphenyl)methoxy]phenyl]propanoic acid | 1430002: Agonist activity at human FFA4 receptor expressed in human U2OS cells co-expressing Galpha16 assessed as calcium mobilization by Fluo-4 dye based FLIPR assay | ec50 | 0.0600 | uM |
CTD chemical–gene interactions
12 total (human), top 12 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol F | increases methylation | 1 |
| sodium arsenite | increases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| abrine | decreases expression | 1 |
| GW9508 | affects binding, increases activity, increases reaction | 1 |
| Allergens | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Methapyrilene | decreases methylation | 1 |
| Silicon Dioxide | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Endocannabinoids | increases reaction, affects binding, increases activity | 1 |
ChEMBL screening assays
121 unique, capped per target: 71 functional, 50 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2060785 | Functional | Agonist activity at GPR120 expressed in HEK 293 cells assessed as beta-arrestin recruitment after 5 mins by BRET assay | Discovery of a potent and selective GPR120 agonist. — *J Med Chem* |
| CHEMBL2320499 | Binding | Agonist activity at GPR120 (unknown origin) | Discovery of a potent and selective free fatty acid receptor 1 agonist with low lipophilicity and high oral bioavailability. — *J Med Chem* |
Cellosaurus cell lines
8 cell lines: 5 spontaneously immortalized cell line, 2 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_F4SA | HyCyte A-549 stable cell line for hFFAR4 overexpression | Cancer cell line | Male |
| CVCL_H443 | CHO-K1/GPR120/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KX25 | PathHunter CHO-K1 GPR120L beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_KX26 | PathHunter CHO-K1 GPR120S beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_KX27 | PathHunter CHO-K1 GPR120S beta-arrestin-1 | Spontaneously immortalized cell line | Female |
| CVCL_KZ51 | PathHunter HEK 293 GPR120L Total GPCR Internalization | Transformed cell line | Female |
| CVCL_U007 | CHO-GPR120 | Spontaneously immortalized cell line | Female |
| CVCL_ZK31 | Tango GPR120-bla U2OS | Cancer cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for FFAR4 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): progressive retinal dystrophy due to retinol transport defect