FH
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Summary
FH (fumarate hydratase, HGNC:3700) is a protein-coding gene on chromosome 1q43, encoding Fumarate hydratase, mitochondrial (P07954). Catalyzes the reversible stereospecific interconversion of fumarate to L-malate. It is a selective cancer dependency (DepMap: 15.0% of cell lines) and haploinsufficient (ClinGen: sufficient evidence).
The protein encoded by this gene is an enzymatic component of the tricarboxylic acid (TCA) cycle, or Krebs cycle, and catalyzes the formation of L-malate from fumarate. It exists in both a cytosolic form and an N-terminal extended form, differing only in the translation start site used. The N-terminal extended form is targeted to the mitochondrion, where the removal of the extension generates the same form as in the cytoplasm. It is similar to some thermostable class II fumarases and functions as a homotetramer. Mutations in this gene can cause fumarase deficiency and lead to progressive encephalopathy.
Source: NCBI Gene 2271 — RefSeq curated summary.
At a glance
- Gene–disease (curated): hereditary leiomyomatosis and renal cell cancer (Definitive, ClinGen) — +4 more curated relationships
- GWAS associations: 3
- Clinical variants (ClinVar): 2,538 total — 280 pathogenic, 133 likely-pathogenic
- Phenotypes (HPO): 127
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 15.0% of screened cell lines
- Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_000143
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3700 |
| Approved symbol | FH |
| Name | fumarate hydratase |
| Location | 1q43 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000091483 |
| Ensembl biotype | protein_coding |
| OMIM | 136850 |
| Entrez | 2271 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 14 protein_coding, 3 retained_intron, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000366560, ENST00000493477, ENST00000497042, ENST00000682162, ENST00000682567, ENST00000683521, ENST00000684161, ENST00000684483, ENST00000865384, ENST00000865385, ENST00000865386, ENST00000865387, ENST00000865388, ENST00000865389, ENST00000865390, ENST00000932939, ENST00000958406, ENST00000958407, ENST00000958408, ENST00000958409
RefSeq mRNA: 1 — MANE Select: NM_000143
NM_000143
CCDS: CCDS1617
Canonical transcript exons
ENST00000366560 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000961688 | 241513603 | 241513713 |
| ENSE00000961689 | 241511967 | 241512143 |
| ENSE00000961690 | 241508603 | 241508785 |
| ENSE00001009258 | 241497603 | 241497970 |
| ENSE00001009262 | 241500437 | 241500590 |
| ENSE00001069121 | 241504042 | 241504245 |
| ENSE00001069122 | 241502443 | 241502570 |
| ENSE00001442032 | 241519591 | 241519755 |
| ENSE00001791261 | 241506003 | 241506168 |
| ENSE00003687860 | 241517182 | 241517316 |
Expression profiles
Bgee: expression breadth ubiquitous, 292 present calls, max score 98.35.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 79.7489 / max 1083.6356, expressed in 1826 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 18283 | 79.7489 | 1826 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| heart right ventricle | UBERON:0002080 | 98.35 | gold quality |
| body of tongue | UBERON:0011876 | 97.98 | gold quality |
| cardiac ventricle | UBERON:0002082 | 97.94 | gold quality |
| heart left ventricle | UBERON:0002084 | 97.93 | gold quality |
| apex of heart | UBERON:0002098 | 97.85 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.74 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 97.69 | gold quality |
| gastrocnemius | UBERON:0001388 | 97.66 | gold quality |
| right lobe of liver | UBERON:0001114 | 97.62 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 97.62 | gold quality |
| cardiac atrium | UBERON:0002081 | 97.59 | gold quality |
| muscle of leg | UBERON:0001383 | 97.55 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 97.49 | gold quality |
| muscle organ | UBERON:0001630 | 97.43 | gold quality |
| biceps brachii | UBERON:0001507 | 97.36 | gold quality |
| heart | UBERON:0000948 | 97.35 | gold quality |
| liver | UBERON:0002107 | 97.29 | gold quality |
| vastus lateralis | UBERON:0001379 | 97.25 | gold quality |
| quadriceps femoris | UBERON:0001377 | 97.21 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.17 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 97.14 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 97.11 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 97.08 | gold quality |
| rectum | UBERON:0001052 | 96.99 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 96.97 | gold quality |
| right adrenal gland | UBERON:0001233 | 96.92 | gold quality |
| myocardium | UBERON:0002349 | 96.92 | gold quality |
| colonic mucosa | UBERON:0000317 | 96.88 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 96.87 | gold quality |
| deltoid | UBERON:0001476 | 96.84 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 8.12 |
| E-MTAB-2983 | no | 215.46 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F1
miRNA regulators (miRDB)
21 targeting FH, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-369-3P | 99.85 | 70.52 | 2264 |
| HSA-MIR-374C-5P | 99.80 | 72.06 | 2910 |
| HSA-MIR-655-3P | 99.80 | 72.19 | 2909 |
| HSA-MIR-7856-5P | 99.75 | 69.99 | 2901 |
| HSA-MIR-7151-5P | 99.37 | 67.82 | 613 |
| HSA-MIR-6882-5P | 99.35 | 71.13 | 1206 |
| HSA-MIR-4528 | 99.18 | 69.77 | 1936 |
| HSA-MIR-376A-3P | 99.06 | 69.17 | 1128 |
| HSA-MIR-376B-3P | 99.06 | 69.17 | 1128 |
| HSA-MIR-3194-3P | 98.83 | 66.22 | 1167 |
| HSA-MIR-6728-3P | 98.63 | 67.63 | 1534 |
| HSA-MIR-4720-3P | 98.50 | 68.88 | 988 |
| HSA-MIR-224-5P | 98.33 | 70.12 | 1256 |
| HSA-MIR-5691 | 98.23 | 67.02 | 1335 |
| HSA-MIR-6805-3P | 98.23 | 67.02 | 1334 |
| HSA-MIR-4708-5P | 97.77 | 67.82 | 831 |
| HSA-MIR-376A-5P | 97.70 | 65.61 | 863 |
| HSA-MIR-1468-5P | 94.18 | 69.04 | 176 |
Functional genomics
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
DepMap (CRISPR cell-line fitness): dependent in 15.0% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- Germline mutations in FH predispose to dominantly inherited uterine fibroids, skin leiomyomata and papillary renal cell cancer (PMID:11865300)
- changes in the turnover number and the cocrystal structure with bound citrate due to the human missense mutation G-955-C engineered in fumarase C from Escherichia coli (PMID:12021453)
- Our findings indicate that mutations in fumarate hydratase do not play a major role in the development of sporadic leiomyosarcomas or uterine leiomyomas (PMID:12177782)
- Review. Fumarate hydratase catalyses a step in the Krebs tricarboxylic-acid cycle. Inherited heterozygous mutations in the gene encoding this enzymes causes predisposition to inherited neoplasia syndromes. (PMID:12612654)
- five new mutations affecting highly conserved residues of the FH protein in cutaneous and uterine leiomyomata (PMID:14632190)
- fumarate hydratase has a role in nonsyndromic uterine leiomyomas (PMID:15334541)
- Highly penetrant Frameshift mutations underlie multiple cuatneous anduterine leiomyomatosis. (PMID:15724016)
- 31 different germline FH mutations in 56 families with Hereditary leiomyomatosis and renal cell cancer (HLRCC) (20 missense, eight frameshifts, two nonsense, and one splice site) was indentified. (PMID:15937070)
- Fumarate hydratase inhibition, together with elevated intracellular fumarate, coincides with hypoxia-indicible factors upregulation. (PMID:16098467)
- That all missense FH mutations associating with MCUL/hereditary leiomyomatosis and renal cell cancer showed diminished FH enzymatic activity suggests that the tumor suppressor role of fumarate hydratase may relate to its enzymatic function (PMID:16237213)
- FH mutations alter significantly the gene expression profiles of uterine fibroids, most strikingly increasing the expression of genes involved in glycolysis. (PMID:16319128)
- This study shows that FH germline mutations can occur in seemingly nonsyndromic cases of ULMS (1/67, 1.5%). It appears that on the population level hereditary FH defects do play a role in pathogenesis of sporadic early onset ULMSs, albeit rarely. (PMID:16477632)
- Lymphoblastoid cell lines (n = 20) and fibroblast cell lines (n = 11) from individuals with Hereditary leiomyomatosis and renal cell cancer (HLRCC) had lower Fumarate Hydratase enzyme activity than cells from normal controls (p<0.05). (PMID:16597677)
- two patients diagnosed with ovarian mucinous cystadenoma (two out of 33, 6%) were found to be FH germline mutation carriers; results suggest that benign ovarian tumors may be associated with hereditary leiomyomatosis and renal cell cancer (HLRCC) (PMID:16639410)
- study shows that some Leydig cell tumors are caused by fumarate hydratase mutations and represents one of the first reports of germline mutations in any type of adult testicular tumor (PMID:16757530)
- extramitochondrial presence of yeast fumarase is mainly caused by the poor mitochondrial targeting characteristics of its mitochondrial targeting sequence (PMID:16774737)
- In six unrelated Dutch and Spanish leiomyomatosis patients and their families, we identified six novel FH mutations, including one missense and one nonsense mutation, two deletions and two splice-site mutations. (PMID:16881969)
- a new mutation in the fumarate hydratase gene may have a role in cerebral cavernomas in a family with multiple cutaneous and uterine leiomyomas (PMID:17476294)
- Evidence for a founder effect of the germ-line FH gene mutation R58P causing hereditary leiomyomatosis and renal cell cancer is presented. (PMID:17908262)
- data demonstrate the dominant negative effect of the R190H missense mutation in the FH gene and suggest that the FH tumor-suppressing activity might be impaired in cells carrying a heterozygous mutation (PMID:17960613)
- characterization of a novel FH variant (FHv) that contains an alternative exon 1b, thus lacking the mitochondrial signal sequence (PMID:18257390)
- The cellular consequences of FH and respiratory chain (RC) deficiencies were studied, aiming to identify general responses to energy metabolism defect and those specific for FH-deficiency, suggestively connected to tumorigenesis. (PMID:18313410)
- finding, together with the two patients with whole FH gene deletion who had been detected previously, suggests that exonic or whole-gene FH deletions are not a frequent cause of HLRCC syndrome (PMID:18503824)
- Hereditary multiple cutaneous leiomyoma resulting from novel mutations in the fumarate hydratase gene are reported in two families. (PMID:18514489)
- Although the familial occurrence of these rare tumors might be coincidental, it cannot be ruled out that, beside FH, mutations in another as yet unknown gene could give rise to both leiomyosarcoma and kidney cancer (PMID:18986479)
- This study provides the first evidence that women with germline mutations in fumarate hydratase and with clinical HLRCC have an increased risk of developing uterine fibroids (PMID:19075141)
- FH-deficient fibroblasts share a common transcriptional fingerprint with FH-deficient and sporadic leiomyomas, highlighting the downregulation of serum response factor (SRF)-regulated transcripts, particularly the FOS-JUNB pathway (PMID:19151755)
- LDH-A knockdown in the background of FH knockdown results in significant reduction in tumor growth in a xenograft mouse model. (PMID:19276158)
- Data demonstrate that stable knockdown of FH in immortalized renal epithelial cells results in ROS-dependent HIF-1alpha stabilization. (PMID:19470762)
- These data suggest a novel role for fumarate metabolism in salt-induced hypertension and renal medullary oxidative stress (PMID:19546378)
- findings indicate that the severe compromise of oxidative phosphorylation and rapid glycolytic flux in UOK 262 are an essential feature of this fumarate hydratase deficient form of kidney cancer (PMID:19963135)
- Data suggest that fumarase and fumaric acid are critical elements of the DNA damage response, which underlies the tumor suppressor role of fumarase in human cells and which is most probably HIF independent. (PMID:20231875)
- first case of fumaric aciduria described in Brazil, which presented with some interesting clinical and biochemical findings such as colpocephaly, hepatic alterations, and marked metabolic acidosis since birth (PMID:20549362)
- 4 novel mutations and 1 whole-gene deletion of fumarate hydratase in families with an autosomal dominant syndrome characterized by multiple cutaneous piloleiomyomas, uterine leiomyomas and papillary type 2 renal cance (PMID:20618355)
- These experiments demonstrated that upregulation of HIF-1alpha occurs as a direct consequence of FH inactivation. (PMID:20660115)
- Novel mutations within the FH gene are associated with hereditary leiomyomatosis and renal cell cancer. (PMID:21398687)
- The crystal structure of human fumarate hydratase shows that mutations can be grouped into two distinct classes either affecting structural integrity of the core enzyme architecture, or are localized around the enzyme active site. (PMID:21445611)
- These results extend the range of clinical and biochemical variation associated with fumarase deficiency. (PMID:21560188)
- reduced FH leads to the accumulation of hypoxia inducible factor- 2alpha (HIF-2alpha) (PMID:21695080)
- Inactivation of the TCA cycle enzyme, fumarate hydratase (FH), drives a metabolic shift to aerobic glycolysis in FH-de fi cient kidney tumors (PMID:21907923)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | fh | ENSDARG00000075132 |
| ENSDARG00000109774 | ||
| mus_musculus | Fh1 | ENSMUSG00000026526 |
| rattus_norvegicus | Fh | ENSRNOG00000003653 |
| drosophila_melanogaster | Fum2 | FBGN0029890 |
| drosophila_melanogaster | Fum3 | FBGN0036162 |
| drosophila_melanogaster | Fum4 | FBGN0051874 |
| drosophila_melanogaster | Fum1 | FBGN0286222 |
| caenorhabditis_elegans | WBGENE00001503 |
Paralogs (2): ASL (ENSG00000126522), ADSL (ENSG00000239900)
Protein
Protein identifiers
Fumarate hydratase, mitochondrial — P07954 (reviewed: P07954)
All UniProt accessions (5): P07954, A0A0S2Z4C3, A0A804HI24, A0A804HKE6, A0A804HL52
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the reversible stereospecific interconversion of fumarate to L-malate. Experiments in other species have demonstrated that specific isoforms of this protein act in defined pathways and favor one direction over the other. Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH. Catalyzes the dehydration of L-malate to fumarate. Fumarate metabolism in the cytosol plays a role during urea cycle and arginine metabolism; fumarate being a by-product of the urea cycle and amino-acid catabolism. Also plays a role in DNA repair by promoting non-homologous end-joining (NHEJ). In response to DNA damage and phosphorylation by PRKDC, translocates to the nucleus and accumulates at DNA double-strand breaks (DSBs): acts by catalyzing formation of fumarate, an inhibitor of KDM2B histone demethylase activity, resulting in enhanced dimethylation of histone H3 ‘Lys-36’ (H3K36me2).
Subunit / interactions. Homotetramer. Interacts with H2AZ1.
Subcellular location. Mitochondrion Cytoplasm. Cytosol. Nucleus. Chromosome.
Tissue specificity. Expressed in red blood cells; underexpressed in red blood cells (cytoplasm) of patients with hereditary non-spherocytic hemolytic anemia of unknown etiology.
Post-translational modifications. Phosphorylation at Thr-236 by PRKDC in response to DNA damage promotes translocation to the nucleus and recruitment to DNA double-strand breaks (DSBs).
Disease relevance. Fumarase deficiency (FMRD) [MIM:606812] A severe autosomal recessive metabolic disorder characterized by early-onset hypotonia, profound psychomotor retardation, and brain abnormalities, such as agenesis of the corpus callosum, gyral defects, and ventriculomegaly. Many patients show neonatal distress, metabolic acidosis, and/or encephalopathy. The disease is caused by variants affecting the gene represented in this entry. Hereditary leiomyomatosis and renal cell cancer (HLRCC) [MIM:150800] A disorder characterized by predisposition to cutaneous and uterine leiomyomas, and papillary type 2 renal cancer which occurs in about 20% of patients. The disease is caused by variants affecting the gene represented in this entry. Isoform Cytoplasmic: HLRCC is probably caused by an accumulation of fumarate. Accumulation of fumarate coupled with protonation promotes the formation of non-enzymatic post-translational modification cysteine S-succination (S-(2-succinyl)cysteine) on proteins, such as SMARCC1.
Pathway. Carbohydrate metabolism; tricarboxylic acid cycle; (S)-malate from fumarate: step 1/1.
Miscellaneous. There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.
Similarity. Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P07954-1 | Mitochondrial | yes |
| P07954-2 | Cytoplasmic |
RefSeq proteins (1): NP_000134* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000362 | Fumarate_lyase_fam | Family |
| IPR005677 | Fum_hydII | Family |
| IPR008948 | L-Aspartase-like | Homologous_superfamily |
| IPR018951 | Fumarase_C_C | Domain |
| IPR020557 | Fumarate_lyase_CS | Conserved_site |
| IPR022761 | Fumarate_lyase_N | Domain |
| IPR024083 | Fumarase/histidase_N | Homologous_superfamily |
Pfam: PF00206, PF10415
Enzyme classification (BRENDA):
- EC 4.2.1.2 — fumarate hydratase (BRENDA: 53 organisms, 85 substrates, 96 inhibitors, 200 Km, 90 kcat entries)
Substrate kinetics (BRENDA)
15 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| FUMARATE | 0.0039–8.8 | 64 |
| (S)-MALATE | 0.0256–32 | 50 |
| L-MALATE | 0.0025–57 | 39 |
| MESACONATE | 0.03–3.2 | 10 |
| (S)-CITRAMALATE | 0.52–1.08 | 8 |
| S-MALATE | 0.005–12.6 | 6 |
| (2S,3S)-TARTRATE | 0.8–6.2 | 4 |
| (S,S)-TARTRATE | 0.8–6.2 | 4 |
| D-TARTRATE | 0.51–0.8 | 3 |
| ACETYLENE DICARBOXYLATE | 0.145–0.9 | 2 |
| FLUOROFUMARATE | 0.027–1.7 | 2 |
| BROMOFUMARATE | 0.11 | 1 |
| CHLOROFUMARATE | 0.11 | 1 |
| IODOFUMARATE | 0.12 | 1 |
| L-TARTRATE | 1.3 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- (S)-malate = fumarate + H2O (RHEA:12460)
UniProt features (92 total): modified residue 24, helix 24, sequence variant 12, strand 8, binding site 6, turn 6, mutagenesis site 5, active site 2, transit peptide 1, chain 1, site 1, splice variant 1, initiator methionine 1
Structure
Experimental structures (PDB)
7 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5UPP | X-RAY DIFFRACTION | 1.8 |
| 6VBE | X-RAY DIFFRACTION | 1.9 |
| 3E04 | X-RAY DIFFRACTION | 1.95 |
| 5D6B | X-RAY DIFFRACTION | 2.1 |
| 7LUB | X-RAY DIFFRACTION | 2.15 |
| 6EBT | X-RAY DIFFRACTION | 2.3 |
| 6V8F | X-RAY DIFFRACTION | 2.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P07954-F1 | 92.92 | 0.89 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 378 (important for catalytic activity); 235 (proton donor/acceptor); 365
Ligand- & substrate-binding residues (6): 145–147; 176–179 (in site b); 186–188; 234; 366; 371–373
Post-translational modifications (24): 61, 61, 66, 66, 80, 80, 85, 90, 94, 115, 115, 122, 122, 213, 223, 223, 236, 256, 292, 292 …
Mutagenesis-validated functional residues (5):
| Position | Phenotype |
|---|---|
| 46 | does not affect phosphorylation by prkdc. |
| 147 | does not affect phosphorylation by prkdc. |
| 187 | does not affect phosphorylation by prkdc. |
| 236 | abolished interaction with h2az1 and localization to chromatin in response to dna damage. |
| 236 | phosphomimetic mutant; promotes interaction with h2az1, leading to increased localization to chromatin in response to dn |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-71403 | Citric acid cycle (TCA cycle) |
| R-HSA-9837999 | Mitochondrial protein degradation |
MSigDB gene sets: 560 (showing top):
GOBP_REGULATION_OF_DOUBLE_STRAND_BREAK_REPAIR, MORF_DNMT1, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, MORF_RRM1, TGACCTY_ERR1_Q2, MORF_HDAC2, GOBP_REGULATION_OF_DNA_REPAIR, GNF2_RRM1, GOBP_DICARBOXYLIC_ACID_METABOLIC_PROCESS, OUELLET_OVARIAN_CANCER_INVASIVE_VS_LMP_UP, GOBP_GENERATION_OF_PRECURSOR_METABOLITES_AND_ENERGY, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP, HOSHIDA_LIVER_CANCER_SUBCLASS_S3
GO Biological Process (11): urea cycle (GO:0000050), obsolete regulation of arginine metabolic process (GO:0000821), tricarboxylic acid cycle (GO:0006099), fumarate metabolic process (GO:0006106), malate metabolic process (GO:0006108), DNA repair (GO:0006281), arginine metabolic process (GO:0006525), DNA damage response (GO:0006974), homeostasis of number of cells within a tissue (GO:0048873), positive regulation of cold-induced thermogenesis (GO:0120162), positive regulation of double-strand break repair via nonhomologous end joining (GO:2001034)
GO Molecular Function (5): fumarate hydratase activity (GO:0004333), histone binding (GO:0042393), catalytic activity (GO:0003824), protein binding (GO:0005515), lyase activity (GO:0016829)
GO Cellular Component (8): nucleus (GO:0005634), chromosome (GO:0005694), cytoplasm (GO:0005737), mitochondrion (GO:0005739), mitochondrial matrix (GO:0005759), cytosol (GO:0005829), site of double-strand break (GO:0035861), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Aerobic respiration and respiratory electron transport | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| dicarboxylic acid metabolic process | 2 |
| intracellular membrane-bounded organelle | 2 |
| cellular anatomical structure | 2 |
| cytoplasm | 2 |
| biosynthetic process | 1 |
| urea metabolic process | 1 |
| aerobic respiration | 1 |
| primary metabolic process | 1 |
| DNA metabolic process | 1 |
| DNA damage response | 1 |
| amino acid metabolic process | 1 |
| carboxylic acid metabolic process | 1 |
| cellular response to stress | 1 |
| tissue homeostasis | 1 |
| homeostasis of number of cells | 1 |
| positive regulation of multicellular organismal process | 1 |
| cold-induced thermogenesis | 1 |
| regulation of cold-induced thermogenesis | 1 |
| double-strand break repair via nonhomologous end joining | 1 |
| positive regulation of double-strand break repair | 1 |
| regulation of double-strand break repair via nonhomologous end joining | 1 |
| hydro-lyase activity | 1 |
| protein binding | 1 |
| molecular_function | 1 |
| binding | 1 |
| catalytic activity | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
| mitochondrion | 1 |
| intracellular organelle lumen | 1 |
| site of DNA damage | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
3366 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FH | CS | O75390 | 945 |
| FH | IDH1 | O75874 | 939 |
| FH | IDH2 | P48735 | 907 |
| FH | ACO2 | Q99798 | 903 |
| FH | SDHB | P21912 | 893 |
| FH | ACO1 | P21399 | 892 |
| FH | MDH2 | P40926 | 810 |
| FH | EPAS1 | Q99814 | 800 |
| FH | SDHD | O14521 | 776 |
| FH | SDHA | P31040 | 769 |
| FH | OGDH | Q02218 | 747 |
| FH | PC | P11498 | 744 |
| FH | EIF5B | O60841 | 742 |
| FH | HIF1A | Q16665 | 731 |
| FH | ACLY | P53396 | 725 |
IntAct
107 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| FH | EXOSC5 | psi-mi:“MI:0915”(physical association) | 0.660 |
| FH | H2AZ1 | psi-mi:“MI:0914”(association) | 0.620 |
| FH | H2AZ1 | psi-mi:“MI:0915”(physical association) | 0.620 |
| PIM1 | FH | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | PIM1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | MRP8 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MRP8 | FH | psi-mi:“MI:0915”(physical association) | 0.560 |
| TNPO2 | FH | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | CCDC57 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | DGCR6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | CCDC102B | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | LMNB2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | SAT1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | CSTPP1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | TTC19 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FH | KLHL6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| POLR1C | FH | psi-mi:“MI:0915”(physical association) | 0.560 |
| DDX21 | MED19 | psi-mi:“MI:2364”(proximity) | 0.480 |
| FH | psi-mi:“MI:0945”(oxidoreductase activity electron transfer reaction) | 0.440 | |
| SAE1 | FH | psi-mi:“MI:0915”(physical association) | 0.400 |
| FH | DBT | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (236): PIM1 (Two-hybrid), ANXA11 (Co-fractionation), ASS1 (Co-fractionation), C11orf54 (Co-fractionation), C9orf64 (Co-fractionation), CAB39 (Co-fractionation), CBR1 (Co-fractionation), CRIP1 (Co-fractionation), ENO1 (Co-fractionation), FAHD2A (Co-fractionation), FH (Co-fractionation), FH (Co-fractionation), FH (Co-fractionation), FH (Co-fractionation), FH (Co-fractionation)
ESM2 similar proteins: O17214, O69294, O94552, P05042, P07343, P07954, P08417, P10173, P14408, P55250, P71384, P93033, P97807, Q49YP8, Q54VA2, Q60HF9, Q6G884, Q6GFK5, Q71XE0, Q7N4H8, Q7SX99, Q7W0A2, Q7W4N9, Q7WG65, Q81SA0, Q822D5, Q83CL8, Q83ML8, Q89XM2, Q8FHA7, Q8FQP8, Q8FX90, Q8KTE1, Q8NRN8, Q8NVV1, Q8TS07, Q8UEY7, Q8X769, Q8Y551, Q8YB50
Diamond homologs: A0A3Q0KQY7, O17214, O25883, O66271, O69294, O84863, O94552, P05042, P07343, P07954, P08417, P10173, P14408, P28894, P55250, P64172, P64173, P71384, P93033, P95331, P97807, P9WN92, P9WN93, Q1RHL6, Q49YP8, Q4L7F5, Q4UMT4, Q51404, Q54VA2, Q55674, Q5HES4, Q5HN85, Q60022, Q60HF9, Q68W74, Q6G884, Q6GFK5, Q71XE0, Q72VY3, Q7N4H8
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| FH | “down-regulates quantity” | fumarate(2-) | “chemical modification” |
| FH | “up-regulates quantity” | (S)-malate(2-) | “chemical modification” |
| PAK4 | “down-regulates quantity” | FH | phosphorylation |
| p38 | “up-regulates activity” | FH | phosphorylation |
| AMPK | “up-regulates activity” | FH | phosphorylation |
| FH | “up-regulates activity” | ATF2 | binding |
| PRKDC | “up-regulates activity” | FH | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 77 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| epidermal growth factor receptor signaling pathway | 5 | 19.4× | 5e-03 |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
2538 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 280 |
| Likely pathogenic | 133 |
| Uncertain significance | 984 |
| Likely benign | 545 |
| Benign | 47 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1010275 | NM_000143.4(FH):c.1497del (p.Glu499fs) | Pathogenic |
| 1011241 | NM_000143.4(FH):c.1176_1181del (p.Ala393_Val394del) | Pathogenic |
| 1060809 | NM_000143.4(FH):c.1177G>C (p.Ala393Pro) | Pathogenic |
| 1067347 | NM_000143.4(FH):c.827G>A (p.Gly276Asp) | Pathogenic |
| 1069140 | NM_000143.4(FH):c.102del (p.Ser35fs) | Pathogenic |
| 1070254 | NM_000143.4(FH):c.735_736delinsTT (p.Gln246Ter) | Pathogenic |
| 1070679 | NM_000143.4(FH):c.109del (p.Trp37fs) | Pathogenic |
| 1070792 | NM_000143.4(FH):c.1280del (p.Ala426_Ser427insTer) | Pathogenic |
| 1072328 | NM_000143.4(FH):c.267+1G>T | Pathogenic |
| 1072523 | NM_000143.4(FH):c.102_120del (p.Ser35fs) | Pathogenic |
| 1072934 | NM_000143.4(FH):c.688A>C (p.Lys230Gln) | Pathogenic |
| 1072957 | NM_000143.3(FH):c.1392delG | Pathogenic |
| 1073160 | NM_000143.4(FH):c.1259_1262dup (p.Arg421fs) | Pathogenic |
| 1073357 | NM_000143.4(FH):c.936del (p.Phe312fs) | Pathogenic |
| 1073831 | NC_000001.10:g.(?241682881)(241683022_?)del | Pathogenic |
| 1073832 | NC_000001.10:g.(?241661128)(241661280_?)del | Pathogenic |
| 1074128 | NM_000143.4(FH):c.1457C>A (p.Ala486Asp) | Pathogenic |
| 1074129 | NM_000143.4(FH):c.950C>T (p.Ala317Val) | Pathogenic |
| 1074197 | NM_000143.4(FH):c.823G>T (p.Gly275Ter) | Pathogenic |
| 1076097 | NM_000143.4(FH):c.1457del (p.Ala486fs) | Pathogenic |
| 1076451 | NM_000143.4(FH):c.32_69del (p.Ser11fs) | Pathogenic |
| 1076604 | NM_000143.4(FH):c.734_735del (p.Gly245fs) | Pathogenic |
| 1076641 | NM_000143.4(FH):c.1499G>A (p.Trp500Ter) | Pathogenic |
| 1298467 | NM_000143.4(FH):c.634del (p.Gln212fs) | Pathogenic |
| 1322912 | NM_000143.4(FH):c.1237-2A>G | Pathogenic |
| 1324397 | NM_000143.4(FH):c.922G>A (p.Ala308Thr) | Pathogenic |
| 1373577 | NM_000143.4(FH):c.674_675del (p.Phe225fs) | Pathogenic |
| 1384577 | NM_000143.4(FH):c.822dup (p.Gly275fs) | Pathogenic |
| 1387287 | NM_000143.4(FH):c.887_888del (p.Lys296fs) | Pathogenic |
| 1391292 | NM_000143.4(FH):c.667A>T (p.Lys223Ter) | Pathogenic |
SpliceAI
1746 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:241497969:CC:C | acceptor_gain | 1.0000 |
| 1:241497970:CC:C | acceptor_gain | 1.0000 |
| 1:241497971:C:T | acceptor_gain | 1.0000 |
| 1:241500432:CTTA:C | donor_loss | 1.0000 |
| 1:241500433:TTA:T | donor_loss | 1.0000 |
| 1:241500435:A:AC | donor_gain | 1.0000 |
| 1:241500435:ACCTA:A | donor_loss | 1.0000 |
| 1:241500436:C:A | donor_loss | 1.0000 |
| 1:241500436:C:CT | donor_gain | 1.0000 |
| 1:241500436:CCT:C | donor_gain | 1.0000 |
| 1:241500436:CCTA:C | donor_gain | 1.0000 |
| 1:241500436:CCTAT:C | donor_gain | 1.0000 |
| 1:241500589:ATC:A | acceptor_loss | 1.0000 |
| 1:241500591:C:CC | acceptor_gain | 1.0000 |
| 1:241500591:CTTTG:C | acceptor_loss | 1.0000 |
| 1:241500592:T:C | acceptor_gain | 1.0000 |
| 1:241500593:T:C | acceptor_gain | 1.0000 |
| 1:241500593:T:TC | acceptor_gain | 1.0000 |
| 1:241500597:G:C | acceptor_gain | 1.0000 |
| 1:241500597:G:GC | acceptor_gain | 1.0000 |
| 1:241500601:G:C | acceptor_gain | 1.0000 |
| 1:241500601:G:GC | acceptor_gain | 1.0000 |
| 1:241502436:AGCTT:A | donor_loss | 1.0000 |
| 1:241502437:GCTTA:G | donor_loss | 1.0000 |
| 1:241502438:CTTA:C | donor_loss | 1.0000 |
| 1:241502439:TTACC:T | donor_loss | 1.0000 |
| 1:241502440:TA:T | donor_loss | 1.0000 |
| 1:241502441:A:AC | donor_gain | 1.0000 |
| 1:241502442:C:CC | donor_gain | 1.0000 |
| 1:241502442:CCAT:C | donor_gain | 1.0000 |
AlphaMissense
3341 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:241502560:G:C | N373K | 1.000 |
| 1:241502560:G:T | N373K | 1.000 |
| 1:241504047:A:G | M368T | 1.000 |
| 1:241504052:A:C | S366R | 1.000 |
| 1:241504052:A:T | S366R | 1.000 |
| 1:241504054:T:G | S366R | 1.000 |
| 1:241504055:G:C | S365R | 1.000 |
| 1:241504055:G:T | S365R | 1.000 |
| 1:241504057:T:G | S365R | 1.000 |
| 1:241508629:C:G | D238H | 1.000 |
| 1:241508777:A:C | N188K | 1.000 |
| 1:241508777:A:T | N188K | 1.000 |
| 1:241508783:G:C | S186R | 1.000 |
| 1:241508783:G:T | S186R | 1.000 |
| 1:241508785:T:G | S186R | 1.000 |
| 1:241512066:A:C | N152K | 1.000 |
| 1:241512066:A:T | N152K | 1.000 |
| 1:241512069:C:A | M151I | 1.000 |
| 1:241512069:C:G | M151I | 1.000 |
| 1:241512069:C:T | M151I | 1.000 |
| 1:241512085:C:T | G146E | 1.000 |
| 1:241512091:C:T | G144E | 1.000 |
| 1:241512101:A:G | W141R | 1.000 |
| 1:241512101:A:T | W141R | 1.000 |
| 1:241517212:A:C | F79L | 1.000 |
| 1:241517212:A:T | F79L | 1.000 |
| 1:241517214:A:G | F79L | 1.000 |
| 1:241517227:T:A | R74S | 1.000 |
| 1:241517227:T:G | R74S | 1.000 |
| 1:241517228:C:G | R74T | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000205644 (1:241497295 T>C), RS1000382827 (1:241500212 C>T), RS1000426999 (1:241503916 T>G), RS1000435396 (1:241499934 T>C), RS1000589147 (1:241508394 T>C), RS1000655833 (1:241506801 A>C), RS1000657431 (1:241497401 T>C), RS1000697960 (1:241501781 G>T), RS1000857946 (1:241516676 C>A,T), RS1000918122 (1:241508802 A>C,G), RS1001118630 (1:241516455 A>G), RS1001147432 (1:241502828 A>C,G), RS1001334367 (1:241509486 A>G), RS1001387952 (1:241509142 A>G), RS1001643704 (1:241512880 G>C)
Disease associations
OMIM: gene MIM:136850 | disease phenotypes: MIM:606812, MIM:150800, MIM:167000, MIM:617769, MIM:150699, MIM:114550, MIM:115310
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| hereditary leiomyomatosis and renal cell cancer | Definitive | Autosomal dominant |
| fumaric aciduria | Definitive | Autosomal recessive |
| pheochromocytoma-paraganglioma | Strong | Autosomal dominant |
| leiomyosarcoma | Moderate | Autosomal dominant |
| hereditary pheochromocytoma-paraganglioma | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| hereditary leiomyomatosis and renal cell cancer | Definitive | AD |
Mondo (15): fumaric aciduria (MONDO:0011730), hereditary neoplastic syndrome (MONDO:0015356), hereditary leiomyomatosis and renal cell cancer (MONDO:0007888), ovarian cancer (MONDO:0008170), spinocerebellar ataxia 45 (MONDO:0033480), leiomyoma cutis (MONDO:0003291), uterine corpus leiomyoma (MONDO:0007886), hepatocellular carcinoma (MONDO:0007256), pheochromocytoma/paraganglioma syndrome 4 (MONDO:0007273), hepatoblastoma (MONDO:0018666), microcephaly (MONDO:0001149), breast cancer (MONDO:0007254), pheochromocytoma-paraganglioma (MONDO:0035540), leiomyosarcoma (MONDO:0005058), hereditary pheochromocytoma-paraganglioma (MONDO:0017366)
Orphanet (8): Inherited cancer-predisposing syndrome (Orphanet:140162), Fumaric aciduria (Orphanet:24), Hereditary leiomyomatosis and renal cell cancer (Orphanet:523), Rare ovarian cancer (Orphanet:213500), Spinocerebellar ataxia type 45 (Orphanet:589527), Hepatocellular carcinoma (Orphanet:88673), Hereditary pheochromocytoma-paraganglioma (Orphanet:29072), Hepatoblastoma (Orphanet:449)
HPO phenotypes
127 total (30 of 127 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000093 | Proteinuria |
| HP:0000096 | Glomerular sclerosis |
| HP:0000131 | Uterine leiomyoma |
| HP:0000218 | High palate |
| HP:0000252 | Microcephaly |
| HP:0000316 | Hypertelorism |
| HP:0000405 | Conductive hearing impairment |
| HP:0000463 | Anteverted nares |
| HP:0000505 | Visual impairment |
| HP:0000518 | Cataract |
| HP:0000526 | Aniridia |
| HP:0000648 | Optic atrophy |
| HP:0000740 | Episodic paroxysmal anxiety |
| HP:0000790 | Hematuria |
| HP:0000817 | Reduced eye contact |
| HP:0000980 | Pallor |
| HP:0000989 | Pruritus |
| HP:0001069 | Episodic hyperhidrosis |
| HP:0001095 | Hypertensive retinopathy |
| HP:0001250 | Seizure |
| HP:0001252 | Hypotonia |
| HP:0001254 | Lethargy |
| HP:0001259 | Coma |
| HP:0001263 | Global developmental delay |
| HP:0001273 | Abnormal corpus callosum morphology |
| HP:0001274 | Agenesis of corpus callosum |
| HP:0001290 | Generalized hypotonia |
| HP:0001293 | Cranial nerve compression |
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003518_79 | Daytime sleep phenotypes | 4.000000e-06 |
| GCST006041_42 | Major depressive disorder | 3.000000e-06 |
| GCST009391_1703 | Metabolite levels | 2.000000e-06 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007828 | daytime rest measurement |
| EFO:0010340 | cholesteryl ester 14:0 measurement |
MeSH disease descriptors (8)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D006528 | Carcinoma, Hepatocellular | C04.557.470.200.025.255; C04.588.274.623.160; C06.301.623.160; C06.552.697.160 |
| D018197 | Hepatoblastoma | C04.557.435.380 |
| D007890 | Leiomyosarcoma | C04.557.450.590.455; C04.557.450.795.455 |
| D008831 | Microcephaly | C05.660.207.620; C10.500.507.400.500; C16.131.621.207.620; C16.131.666.507.400.500 |
| D009386 | Neoplastic Syndromes, Hereditary | C04.700; C16.320.700 |
| D010051 | Ovarian Neoplasms | C04.588.322.455; C12.050.351.500.056.630.705; C12.050.351.937.418.685; C12.100.250.056.630.705; C12.900.418.685; C19.344.410; C19.391.630.705 |
| C538191 | Fumaric aciduria (supp.) | |
| C535516 | Hereditary leiomyomatosis and renal cell cancer (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066495 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
80 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, affects expression | 6 |
| bisphenol A | decreases expression, increases expression | 4 |
| sodium arsenite | affects response to substance, affects expression, decreases expression, decreases reaction, affects reaction (+2 more) | 4 |
| bisphenol F | increases expression, affects cotreatment, decreases expression | 3 |
| trichostatin A | affects cotreatment, increases expression | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 2 |
| bisphenol S | increases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| ML-265 | decreases expression, decreases reaction | 1 |
| dicrotophos | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| lasiocarpine | decreases expression | 1 |
| nobiletin | decreases expression, decreases reaction | 1 |
| sodium arsenate | decreases expression, decreases reaction | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, increases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| 2,6-dichloro-4-nitrophenol | decreases expression | 1 |
| 11-nor-delta(9)-tetrahydrocannabinol-9-carboxylic acid | affects methylation, increases abundance | 1 |
| cobaltous chloride | decreases expression | 1 |
| pinosylvin | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| macrosphelide A | affects binding, decreases activity | 1 |
| erucylphospho-N,N,N-trimethylpropylammonium | decreases expression | 1 |
| erastin | decreases response to substance | 1 |
| ICG 001 | decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| hexabrominated diphenyl ether 153 | increases expression | 1 |
| olaparib | increases response to substance | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5651427 | Binding | Binding affinity to human FH incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
6 cell lines: 6 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_1D72 | UOK262 | Cancer cell line | Female |
| CVCL_1D73 | UOK268 | Cancer cell line | Female |
| CVCL_E7RC | UOK271 | Cancer cell line | Female |
| CVCL_E7RD | UOK348 | Cancer cell line | Female |
| CVCL_E7RE | UOK350 | Cancer cell line | Male |
| CVCL_RN43 | UOK262-WT | Cancer cell line | Female |
Clinical trials (associated diseases)
402 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00190697 | PHASE4 | COMPLETED | A Study of LY353381 (Arzoxifene) for Patients Who Benefitted From This Drug in Other Oncology Trials and Wished to Continue Treatment |
| NCT00277160 | PHASE4 | COMPLETED | A Study of Primary Prophylaxis With Neulasta (Pegfilgrastim) Versus Secondary Prophylaxis After Chemotherapy in Elderly Subjects (>/= 65 Years Old) With Cancer |
| NCT00727961 | PHASE4 | COMPLETED | A Study to Evaluate Efficacy and Tolerance of Caelyx in Patients With Epithelial Ovarian Cancer. (Study P04072)(COMPLETED) |
| NCT00740116 | PHASE4 | COMPLETED | Tranexamic Acid in Surgery of Advanced Ovarian Cancer |
| NCT00817479 | PHASE4 | COMPLETED | Tumor Gene Expression in Women With Ovarian Cancer |
| NCT01432015 | PHASE4 | COMPLETED | Fosaprepitant Versus Aprepitant in the Prevention of Chemotherapy Induced Nausea and Vomiting |
| NCT01706120 | PHASE4 | UNKNOWN | Study of Clinical and Biological Prognostic Factors in Patients With Ovarian Cancer Receiving Carboplatin +Paclitaxel With Bevacizumab |
| NCT01932125 | PHASE4 | COMPLETED | An Interventional Study of Avastin (Bevacizumab) in Patients With Advanced/Metastatic Epithelial Ovarian Cancer, Fallopian Tube Cancer or Primary Peritoneal Cancer |
| NCT01953107 | PHASE4 | COMPLETED | Oral Iron vs. Placebo in Newly Diagnosed Gynecologic Oncology Patients Who Are Surgical Candidates. |
| NCT02035345 | PHASE4 | TERMINATED | Slowed Carboplatin Infusion for Ovarian Cancer Patients Receiving Carboplatin Re-Treatment |
| NCT02243059 | PHASE4 | WITHDRAWN | Magnetic Resonance Imaging for Lymph Node Staging in Ovarian Cancer |
| NCT03164980 | PHASE4 | TERMINATED | QoL-Comparison Between Trabectedin/PLD and Pt-based Therapy in Patients With Pt-sensitive Recurrent Ovarian Cancer |
| NCT03384511 | PHASE4 | COMPLETED | The Use of 18F-ALF-NOTA-PRGD2 PET/CT Scan to Predict the Efficacy and Adverse Events of Apatinib in Malignancies. |
| NCT03543462 | PHASE4 | COMPLETED | Diaphragmatic Resection And Gynecological Ovarian Neoplasm |
| NCT03752216 | PHASE4 | COMPLETED | NIraparib and Quality of LifE is a Longitudinal Study Evaluating in Real Life the Tolerability of Niraparib. |
| NCT03858166 | PHASE4 | TERMINATED | Efficacy and Safety of PEG-rhG-CSF Secondary Prophylaxis vs. Therapeutic Administration in Patients With Ovarian Cancer |
| NCT04024254 | PHASE4 | COMPLETED | A Study of Serum Folate Levels in Patients Treated With Olaparib |
| NCT04330040 | PHASE4 | COMPLETED | Prospective Multicentre Phase-IV Clinical Trial of Olaparib in Indian Patients With Ovarian and Metastatic Breast Cancer |
| NCT04352439 | PHASE4 | COMPLETED | Aspirin for Prevention of Venous Thromboembolism Among Ovarian Cancer Patients Receiving Neoadjuvant Chemotherapy |
| NCT05187208 | PHASE4 | UNKNOWN | PARP Inhibitor Oral Maintenance in Low-Risk Ovarian Cancer |
| NCT05606692 | PHASE4 | RECRUITING | Influences of Propofol and Sevoflurane Anesthesia in Ovarian Cancer (Anesthetics) |
| NCT05926336 | PHASE4 | RECRUITING | The Effects of Using Different Anesthetics on the Prognosis of Primary Tumors and Its Mechanism of Action |
| NCT06412120 | PHASE4 | RECRUITING | Study Evaluating Safety, Tolerability, and Metabolism of Niraparib |
| NCT06871787 | PHASE4 | NOT_YET_RECRUITING | Near-Infrared Fluorescence Imaging With Indocyanine Green to Evaluate Bowel Anastomoses in Gynecologic Oncology Surgery |
| NCT06887933 | PHASE4 | NOT_YET_RECRUITING | A Trial to Evaluate the Safety of Niraparib Tablets in Adult Female Participants With Advanced or Relapsed Epithelial Ovarian Cancer |
| NCT07469202 | PHASE4 | NOT_YET_RECRUITING | CYTALUX Dose Extension Study |
| NCT01343277 | PHASE3 | COMPLETED | A Study of Trabectedin or Dacarbazine for the Treatment of Patients With Advanced Liposarcoma or Leiomyosarcoma |
| NCT01692678 | PHASE3 | COMPLETED | A Study of Trabectedin (YONDELIS) in Patients With Locally Advanced or Metastatic Liposarcoma or Leiomyosarcoma |
| NCT03016819 | PHASE3 | RECRUITING | Phase III Trial of Anlotinib, Catequentinib in Advanced Alveolar Soft Part Sarcoma, Leiomyosarcoma, Synovial Sarcoma (APROMISS) |
| NCT03773510 | PHASE3 | WITHDRAWN | Study on Leiomyosarcoma, Liposarcomas and Synovial Sarcoma With Trabectedin |
| NCT04031677 | PHASE3 | RECRUITING | Surgery With or Without Neoadjuvant Chemotherapy in High Risk RetroPeritoneal Sarcoma |
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Related Atlas pages
- Associated diseases: hereditary leiomyomatosis and renal cell cancer, pheochromocytoma-paraganglioma, fumaric aciduria, leiomyosarcoma, hereditary pheochromocytoma-paraganglioma
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): fumaric aciduria, hepatoblastoma, hepatocellular carcinoma, hereditary leiomyomatosis and renal cell cancer, hereditary pheochromocytoma-paraganglioma, leiomyoma cutis, leiomyosarcoma, pheochromocytoma-paraganglioma, pheochromocytoma/paraganglioma syndrome 4, spinocerebellar ataxia 45, uterine corpus leiomyoma