FHIP1A-DT

Summary

FHIP1A-DT (FHIP1A divergent transcript, HGNC:53123) is a long non-coding RNA gene on chromosome 4q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53123
Approved symbol	FHIP1A-DT
Name	FHIP1A divergent transcript
Location	4q31.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-610P16.1
Ensembl gene	ENSG00000251611
Ensembl biotype	lncRNA
Entrez	105377486
RNAcentral	URS00026A20A5 — lncRNA, 2392 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000508847, ENST00000603264, ENST00000716600, ENST00000833596, ENST00000833597, ENST00000833598, ENST00000833599, ENST00000833600, ENST00000833601, ENST00000833602, ENST00000833603, ENST00000833604, ENST00000833605, ENST00000833606, ENST00000833607, ENST00000833608, ENST00000833609, ENST00000833610

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508847 — 4 exons

Exon	Start	End
ENSE00002031035	151407489	151407707
ENSE00002064258	151408635	151408835
ENSE00004250343	151380804	151381216
ENSE00004250360	151405523	151405608

Expression profiles

Bgee: expression breadth ubiquitous, 122 present calls, max score 94.11.

FANTOM5 (CAGE): breadth broad, TPM avg 0.6266 / max 65.9368, expressed in 334 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
54353	0.6266	334

Top tissues by expression

122 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	94.11	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.39	gold quality
right uterine tube	UBERON:0001302	79.29	gold quality
rectum	UBERON:0001052	73.19	gold quality
skin of leg	UBERON:0001511	70.92	gold quality
zone of skin	UBERON:0000014	70.81	gold quality
skin of abdomen	UBERON:0001416	70.55	gold quality
islet of Langerhans	UBERON:0000006	70.51	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	70.36	gold quality
colonic epithelium	UBERON:0000397	70.18	silver quality
thyroid gland	UBERON:0002046	68.95	gold quality
left lobe of thyroid gland	UBERON:0001120	68.63	gold quality
skeletal muscle tissue	UBERON:0001134	68.29	gold quality
fallopian tube	UBERON:0003889	68.24	gold quality
gall bladder	UBERON:0002110	68.10	gold quality
urinary bladder	UBERON:0001255	67.59	gold quality
mucosa of transverse colon	UBERON:0004991	67.21	gold quality
right lobe of thyroid gland	UBERON:0001119	66.90	gold quality
pancreas	UBERON:0001264	65.83	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.79	gold quality
duodenum	UBERON:0002114	65.73	gold quality
lymph node	UBERON:0000029	65.01	gold quality
transverse colon	UBERON:0001157	64.98	gold quality
pituitary gland	UBERON:0000007	64.19	gold quality
tonsil	UBERON:0002372	63.90	gold quality
monocyte	CL:0000576	63.81	gold quality
muscle of leg	UBERON:0001383	63.47	gold quality
body of pancreas	UBERON:0001150	63.12	gold quality
endocervix	UBERON:0000458	62.58	gold quality
gastrocnemius	UBERON:0001388	62.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.