FHL1
gene geneOn this page
Also known as SLIM1KYO-TbA535K18.1FHL1BXMPMAFLH1AMGC111107
Summary
FHL1 (four and a half LIM domains 1, HGNC:3702) is a protein-coding gene on chromosome Xq26.3, encoding Four and a half LIM domains protein 1 (Q13642). May have an involvement in muscle development or hypertrophy.
This gene encodes a member of the four-and-a-half-LIM-only protein family. Family members contain two highly conserved, tandemly arranged, zinc finger domains with four highly conserved cysteines binding a zinc atom in each zinc finger. Expression of these family members occurs in a cell- and tissue-specific mode and these proteins are involved in many cellular processes. Mutations in this gene have been found in patients with Emery-Dreifuss muscular dystrophy. Multiple alternately spliced transcript variants which encode different protein isoforms have been described.
Source: NCBI Gene 2273 — RefSeq curated summary.
At a glance
- Gene–disease (curated): X-linked myopathy with postural muscle atrophy (Definitive, GenCC) — +5 more curated relationships
- Clinical variants (ClinVar): 673 total — 75 pathogenic, 22 likely-pathogenic
- Phenotypes (HPO): 120
- MANE Select transcript:
NM_001159699
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3702 |
| Approved symbol | FHL1 |
| Name | four and a half LIM domains 1 |
| Location | Xq26.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | SLIM1, KYO-T, bA535K18.1, FHL1B, XMPMA, FLH1A, MGC111107 |
| Ensembl gene | ENSG00000022267 |
| Ensembl biotype | protein_coding |
| OMIM | 300163 |
| Entrez | 2273 |
Gene structure
Transcript identifiers
Ensembl transcripts: 41 — 36 protein_coding, 3 retained_intron, 2 protein_coding_CDS_not_defined
ENST00000370674, ENST00000370676, ENST00000370683, ENST00000394153, ENST00000394155, ENST00000420362, ENST00000434885, ENST00000449474, ENST00000452016, ENST00000456445, ENST00000458357, ENST00000477080, ENST00000477204, ENST00000535737, ENST00000539015, ENST00000543669, ENST00000618438, ENST00000625935, ENST00000626004, ENST00000627383, ENST00000627578, ENST00000627812, ENST00000628032, ENST00000628443, ENST00000628568, ENST00000628919, ENST00000629039, ENST00000630084, ENST00000630278, ENST00000630677, ENST00000630684, ENST00000651089, ENST00000651256, ENST00000651929, ENST00000652457, ENST00000652745, ENST00000862283, ENST00000862284, ENST00000862285, ENST00000862286, ENST00000952767
RefSeq mRNA: 15 — MANE Select: NM_001159699
NM_001159699, NM_001159700, NM_001159701, NM_001159702, NM_001159703, NM_001159704, NM_001167819, NM_001330659, NM_001369326, NM_001369327, NM_001369328, NM_001369329, NM_001369330, NM_001369331, NM_001449
CCDS: CCDS14655, CCDS55505, CCDS55506, CCDS55507, CCDS76036, CCDS83493
Canonical transcript exons
ENST00000370683 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000676980 | 136208455 | 136208641 |
| ENSE00000890595 | 136207016 | 136207190 |
| ENSE00000890598 | 136207792 | 136207961 |
| ENSE00001453299 | 136197047 | 136197134 |
| ENSE00003570762 | 136206407 | 136206588 |
| ENSE00003764342 | 136209871 | 136211354 |
Expression profiles
Bgee: expression breadth ubiquitous, 291 present calls, max score 99.99.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 58.5651 / max 5480.9512, expressed in 1571 samples.
FANTOM5 promoters (29 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 197669 | 19.8255 | 424 |
| 197652 | 13.1920 | 1391 |
| 197651 | 8.8957 | 1480 |
| 197671 | 6.3772 | 279 |
| 197668 | 3.8050 | 250 |
| 197650 | 1.7176 | 1020 |
| 197653 | 0.9799 | 480 |
| 197649 | 0.4247 | 201 |
| 209826 | 0.4000 | 161 |
| 197659 | 0.3955 | 166 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 99.99 | gold quality |
| biceps brachii | UBERON:0001507 | 99.98 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 99.96 | gold quality |
| body of tongue | UBERON:0011876 | 99.96 | gold quality |
| vastus lateralis | UBERON:0001379 | 99.95 | gold quality |
| deltoid | UBERON:0001476 | 99.95 | gold quality |
| diaphragm | UBERON:0001103 | 99.94 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 99.94 | gold quality |
| quadriceps femoris | UBERON:0001377 | 99.94 | gold quality |
| urethra | UBERON:0000057 | 99.93 | gold quality |
| tibialis anterior | UBERON:0001385 | 99.93 | gold quality |
| triceps brachii | UBERON:0001509 | 99.93 | gold quality |
| synovial joint | UBERON:0002217 | 99.92 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 99.92 | gold quality |
| gastrocnemius | UBERON:0001388 | 99.90 | gold quality |
| muscle organ | UBERON:0001630 | 99.90 | gold quality |
| gluteal muscle | UBERON:0002000 | 99.89 | gold quality |
| blood vessel layer | UBERON:0004797 | 99.89 | gold quality |
| saphenous vein | UBERON:0007318 | 99.89 | gold quality |
| muscle of leg | UBERON:0001383 | 99.88 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.87 | gold quality |
| mucosa of stomach | UBERON:0001199 | 99.84 | gold quality |
| right coronary artery | UBERON:0001625 | 99.83 | gold quality |
| vena cava | UBERON:0004087 | 99.82 | gold quality |
| skin of hip | UBERON:0001554 | 99.80 | gold quality |
| ascending aorta | UBERON:0001496 | 99.79 | gold quality |
| thoracic aorta | UBERON:0001515 | 99.79 | gold quality |
| aorta | UBERON:0000947 | 99.78 | gold quality |
| popliteal artery | UBERON:0002250 | 99.78 | gold quality |
| tibial artery | UBERON:0007610 | 99.78 | gold quality |
Single-cell (SCXA)
Detected in 15 experiment(s), a significant marker in 15.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-13 | yes | 1407.22 |
| E-GEOD-135922 | yes | 894.95 |
| E-HCAD-1 | yes | 80.14 |
| E-MTAB-10287 | yes | 67.38 |
| E-MTAB-8410 | yes | 52.42 |
| E-HCAD-11 | yes | 43.89 |
| E-HCAD-10 | yes | 36.57 |
| E-CURD-46 | yes | 25.25 |
| E-GEOD-84465 | yes | 22.27 |
| E-HCAD-5 | yes | 16.78 |
| E-CURD-112 | yes | 10.65 |
| E-MTAB-10553 | yes | 6.14 |
| E-HCAD-9 | yes | 5.03 |
| E-GEOD-130148 | yes | 4.19 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
72 targeting FHL1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-374A-5P | 99.90 | 71.34 | 2923 |
| HSA-MIR-374B-5P | 99.90 | 69.98 | 2734 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-544A | 99.84 | 68.66 | 1965 |
| HSA-MIR-8080 | 99.82 | 67.52 | 1342 |
| HSA-MIR-3133 | 99.81 | 70.92 | 3506 |
| HSA-MIR-4517 | 99.76 | 69.19 | 1867 |
| HSA-MIR-8084 | 99.73 | 69.57 | 1760 |
| HSA-MIR-1197 | 99.70 | 67.75 | 1027 |
| HSA-MIR-3059-5P | 99.70 | 69.93 | 2491 |
| HSA-MIR-1208 | 99.70 | 68.28 | 1533 |
| HSA-MIR-1205 | 99.65 | 66.76 | 1826 |
| HSA-MIR-10394-5P | 99.65 | 66.83 | 1852 |
| HSA-MIR-4666B | 99.64 | 68.69 | 1282 |
| HSA-MIR-298 | 99.63 | 67.56 | 1916 |
| HSA-MIR-5003-5P | 99.61 | 69.13 | 1624 |
| HSA-MIR-3682-3P | 99.58 | 67.63 | 865 |
| HSA-MIR-4649-3P | 99.56 | 66.90 | 1783 |
| HSA-MIR-7844-5P | 99.55 | 68.56 | 1428 |
| HSA-MIR-105-5P | 99.54 | 69.24 | 2060 |
| HSA-MIR-7853-5P | 99.54 | 69.30 | 2055 |
| HSA-MIR-12123 | 99.52 | 71.79 | 2990 |
| HSA-MIR-6081 | 99.48 | 66.07 | 1446 |
| HSA-MIR-4728-3P | 99.47 | 68.94 | 981 |
Literature-anchored findings (GeneRIF, showing 40)
- SLIM1 may play an important role during the early stages of skeletal muscle differentiation, specifically in alpha5beta1-integrin-mediated signaling pathways (PMID:12917103)
- FHL1 is a novel regulator of myosin-binding protein C activity that may have a role in sarcomere assembly (PMID:16407297)
- Fasting insulin and insulin sensitivity index responses to exercise training were associated with DNA sequence variation in FHL1 in white men. (PMID:17589823)
- These results characterize TLX1 as a dual function regulator whose activity in respect to FHL1 is critically dependent upon its cellular concentration, as well as cell type and promoter context. (PMID:18073142)
- Study characterized a new disorder, X-linked myopathy with postural muscle atrophy (XMPMA), and identified FHL1 as the causative gene. (PMID:18179888)
- In a large Italian-American pedigree with dominant Scapuloperoneal syndrome all of the affected individuals have a missense change (c.365G–>C) in the FHL1 gene encoding FHL1. (PMID:18179901)
- The results shows that HOXD13 gene mutation was not involved in outbreak in idiopathic congenital talipes equinovarus, but changes of HOXD13 and FHL1 gene expression related to the development of talipes equinovarus malformation. (PMID:18244901)
- a novel laser microdissection/proteomics approach has helped identify both inherited and de novo mutations in FHL1, thereby defining a new X-linked protein aggregation disorder of muscle. (PMID:18274675)
- Results support a role of FHL1 as a key molecular component in the I(Kur) complex in human atrium, where it likely regulates functional expression of KCNA5. (PMID:18281375)
- Fhl1 gene was underexpressed in clinical gastric cancer. (PMID:18465173)
- upregulated in various forms of PH, including idiopathic pulmonary arterial hypertension (PMID:18725486)
- Hoxd13 and Fhl1 were expressed in the interdigital tissues of E12.5 rat embryo. Luciferase assay and EMSA identified a novel promoter region of Fhl1 that directly interacts with Hoxd13 (PMID:18758158)
- FHL1 appears to modulate muscle mass and strength enhancement. (PMID:19075112)
- Human four-and-a-half LIM family members suppress tumor cell growth through a TGF-beta-like signaling pathway. (PMID:19139564)
- Four novel mutations are identified in FHL1: heterozygous missense mutations in patients 1 and 2 (fatal infantile form), in-frame deletion in patient 3, and hemizygous mutation in patient 4. All mutations are located in the second LIM domain of FHL1. (PMID:19171836)
- The mutations detected were exclusive to the second LIM domain of FHL1 and were found in both sporadic as well as familial cases of reducing body myopathy. (PMID:19181672)
- The results presented here suggested the cooperative transcriptional regulation of estrogen signaling by FHL1 and RIP140. (PMID:19401155)
- As a consequence of C terminal FHL1 gene mutations, the X-linked myopathy characterized by postural muscle atrophy (XMPMA) phenotype and morphotype with cytoplasmic bodies are found. (PMID:19687455)
- FHL1 should be considered as a gene associated with the X-linked Emery-Dreifuss muscular dystrophy phenotype, as well as with hypertrophic cardiomyopathy. (PMID:19716112)
- The pH-regulated antigen 1 (Pra1) protein was identified as a novel Factor H and FHL-1 binding protein. (PMID:19850343)
- Our finding expands the phenotypic spectrum of the recently identified FHL1-associated myopathies and widens the differential diagnosis of Emery-Dreifuss-like syndromes. (PMID:20186852)
- This study reported a novel LIM2 domain mutation in FHL1 in a family with Reducing body myopathy with cytoplasmic bodies and spinal rigidity. (PMID:20571991)
- Expression levels of FHL1 mRNA increased in all cell lines tested, as shown by RT-PCR. The methylation index of FHL1 in our samples was significantly higher in 70 BC specimens than in 10 normal bladder epithelium specimens. (PMID:20596604)
- A novel missense mutation in the LIM2 domain of FHL1 co-segregated with X-linked scapuloperoneal myopathy in the family (PMID:20633900)
- FHL1B/PP2A(Cbeta) interaction may illustrate a novel cell-cycle regulatory pathway. (PMID:20969868)
- FHL1 protein expression is downregulated in thoracic aortic dissection. (PMID:21126853)
- These results indicate that USP15 is involved in the regulation of hypertrophic responses in cardiac muscle through transcriptional and post-translational modulation of SLIM1. (PMID:21219870)
- This review will profile each of the FHL1, with a comprehensive analysis of mutations, a comparison of the clinical and histopathological features and will present several hypotheses for the possible disease mechanism(s)–{REVIEW} (PMID:21310615)
- We report on three British families with a heterogeneous myopathy clinical presentation segregating a single FHL1 gene mutation and haplotype, suggesting that this represents a founder mutation. (PMID:21629301)
- reduced expression of FHL1 may play an important role in the development and progression of lung cancer. (PMID:21702045)
- In order to substantiate a possible relation between K(v1.5) and FHL1C, a pull-down assay was performed. (PMID:22053194)
- FHL-1 may regulate estrogen receptor signaling function through regulation of AKT activation besides the physical and functional interaction with Estrogen receptor alpha. (PMID:22094188)
- FHL1 dystrophies are associated with myofibrillar myopathies pathology; mutations in the LIM2 domain are associated with reducing bodies composed of distinct tubulofilaments. (PMID:22094483)
- The decrease in or loss of FHL1 expression may be related to the incidence, progression, invasiveness, and metastatic potential of gastric cancer. (PMID:22143536)
- FHL1-3 inhibit HIF-1 transcriptional activity and HIF-1alpha transactivation domain function by oxygen-independent mechanisms. (PMID:22219185)
- FHL1 is a novel disease gene for hypertrophic cardiomyopathy. (PMID:22523091)
- A mother, daughter, and son suffering from FHL1 myopathy have a mutation in the second LIM domain of fhl1 with musculoskeletal involvement. (PMID:22541254)
- FHL1 is a methylation-silenced tumor-suppressor gene on chromosome X in gastrointestinal cancers, and that its silencing contributes to the formation of an epigenetic field for cancerization. (PMID:22689052)
- A novel mechanism involving four-and-a-half LIM domain protein-1 and extracellular signal-regulated kinase-2 regulates titin phosphorylation and mechanics. (PMID:22778266)
- C224W mutation of FHLi protein had slightly elevated pulmonary artery pressure (PMID:22923418)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | fhl1b | ENSDARG00000056653 |
| danio_rerio | fhl1a | ENSDARG00000071498 |
| mus_musculus | Fhl1 | ENSMUSG00000023092 |
| mus_musculus | Fhl4 | ENSMUSG00000050035 |
| rattus_norvegicus | Fhl4 | ENSRNOG00000006998 |
Paralogs (20): LMO3 (ENSG00000048540), LHX5 (ENSG00000089116), ZFHX4 (ENSG00000091656), LHX2 (ENSG00000106689), LHX6 (ENSG00000106852), LHX3 (ENSG00000107187), LHX4 (ENSG00000121454), LMO2 (ENSG00000135363), ZFHX2 (ENSG00000136367), LMX1B (ENSG00000136944), ZFHX3 (ENSG00000140836), LMO4 (ENSG00000143013), LHX9 (ENSG00000143355), CRIP3 (ENSG00000146215), LHX8 (ENSG00000162624), LMX1A (ENSG00000162761), LMO1 (ENSG00000166407), CRIP2 (ENSG00000182809), CRIP1 (ENSG00000213145), LHX1 (ENSG00000273706)
Protein
Protein identifiers
Four and a half LIM domains protein 1 — Q13642 (reviewed: Q13642)
Alternative names: Skeletal muscle LIM-protein 1
All UniProt accessions (18): A0A0D9SEY7, A0A0D9SFB0, A0A0D9SFI6, A0A0D9SFZ9, A0A0D9SGB2, A0A0D9SGC5, A0A0D9SGD1, A0A494C0D6, A0A494C0J3, A0A494C1G1, Q13642, Q5JXH7, Q5JXH8, Q5JXH9, Q5JXI0, Q5JXI2, Q5JXI3, Q5JXI8
UniProt curated annotations — full annotation on UniProt →
Function. May have an involvement in muscle development or hypertrophy.
Subunit / interactions. (Microbial infection) Interacts (via LIM domain 1) with Chikungunya virus non-structural protein 3 (via C-terminus); this interaction is required for viral RNA replication.
Subcellular location. Cytoplasm Cytoplasm. Nucleus Nucleus. Cytoplasm. Cytosol.
Tissue specificity. Isoform 1 is highly expressed in skeletal muscle and to a lesser extent in heart, placenta, ovary, prostate, testis, small intestine, colon and spleen. Expression is barely detectable in brain, lung, liver, kidney, pancreas, thymus and peripheral blood leukocytes. Isoform 2 is expressed in brain, skeletal muscle and to a lesser extent in heart, colon, prostate and small intestine. Isoform 3 is expressed in testis, heart and skeletal muscle.
Disease relevance. Emery-Dreifuss muscular dystrophy 6, X-linked (EDMD6) [MIM:300696] A form of Emery-Dreifuss muscular dystrophy, a degenerative myopathy characterized by weakness and atrophy of muscle without involvement of the nervous system, early contractures of the elbows, Achilles tendons and spine, and cardiomyopathy associated with cardiac conduction defects. The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry. Scapuloperoneal myopathy, X-linked dominant (SPM) [MIM:300695] A disease characterized by progressive muscle weakness and wasting, upper and lower limbs weakness, foot drop, scapular winging, and myopathic changes on muscle biopsy. Most affected individuals become wheelchair-bound. The disease is caused by variants affecting the gene represented in this entry. Myopathy, X-linked, with postural muscle atrophy (XMPMA) [MIM:300696] A progressive muscular dystrophy with onset in adulthood. Affected individuals develop a proximal myopathy characterized by specific atrophy of postural muscles, limited neck flexion, bent spine, contractures of the Achilles tendon, respiratory problems, and cardiomyopathy. Patients may show muscle hypertrophy in the early stages of the disorder. The disease is caused by variants affecting the gene represented in this entry. Reducing body myopathy, X-linked 1A, severe, with infantile or early childhood onset (RBMX1A) [MIM:300717] A rare myopathy clinically characterized by rapidly progressive muscular weakness, and pathologically by the presence of intracytoplasmic inclusion bodies strongly stained by menadione-linked alpha-glycerophosphate dehydrogenase in the absence of substrate, alpha-glycerophosphate. The term ‘reducing body’ refers to the reducing activity of the inclusions to nitroblue tetrazolium in the absence of substrate. This condition is also commonly associated with rimmed vacuoles and cytoplasmic bodies. Death in childhood is frequent in the severe form of the disease, due to respiratory failure. The disease is caused by variants affecting the gene represented in this entry. Reducing body myopathy, X-linked 1B, with late childhood or adult onset (RBMX1B) [MIM:300718] A rare myopathy clinically characterized by rapidly progressive muscular weakness, and pathologically by the presence of intracytoplasmic inclusion bodies strongly stained by menadione-linked alpha-glycerophosphate dehydrogenase in the absence of substrate, alpha-glycerophosphate. The term ‘reducing body’ refers to the reducing activity of the inclusions to nitroblue tetrazolium in the absence of substrate. This condition is also commonly associated with rimmed vacuoles and cytoplasmic bodies. The disease is caused by variants affecting the gene represented in this entry. Uruguay faciocardiomusculoskeletal syndrome (FCMSU) [MIM:300280] An X-linked recessive syndrome characterized by brachyturricephaly, pugilistic coarse facies, a muffled voice, cardiomyopathy, muscular hypertrophy, broad hands, wide feet with progressive pes cavus deformities, dislocation of toes, variable congenital hip dislocation, and scoliosis. The disease is caused by variants affecting the gene represented in this entry.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13642-2 | 2, FHL1B, SLIMMER | yes |
| Q13642-1 | 1, FHL1, FHL1A, SLIM1 | |
| Q13642-3 | 3, FHL1C | |
| Q13642-4 | 4 | |
| Q13642-5 | 5 |
RefSeq proteins (15): NP_001153171, NP_001153172, NP_001153173, NP_001153174, NP_001153175, NP_001153176, NP_001161291, NP_001317588, NP_001356255, NP_001356256, NP_001356257, NP_001356258, NP_001356259, NP_001356260, NP_001440 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001781 | Znf_LIM | Domain |
| IPR042997 | Fhl1 | Family |
| IPR056807 | LIM_FHL1/2/3/5_N | Domain |
Pfam: PF00412, PF25076
UniProt features (63 total): sequence variant 20, strand 19, sequence conflict 5, splice variant 4, turn 4, domain 3, helix 3, initiator methionine 1, chain 1, zinc finger region 1, modified residue 1, cross-link 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1X63 | SOLUTION NMR | |
| 2CUP | SOLUTION NMR | |
| 2CUR | SOLUTION NMR | |
| 2EGQ | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13642-F1 | 73.11 | 0.40 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2): 4, 86
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 594 (showing top):
GOBP_POTASSIUM_ION_TRANSPORT, VERHAAK_AML_WITH_NPM1_MUTATED_DN, GOBP_MEMBRANE_DEPOLARIZATION, ZHAN_LATE_DIFFERENTIATION_GENES_UP, CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_DN, TSENG_IRS1_TARGETS_UP, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN, CHIARETTI_T_ALL_REFRACTORY_TO_THERAPY, GOBP_NEGATIVE_REGULATION_OF_CELL_GROWTH, GOBP_CELL_CYCLE_PHASE_TRANSITION, GOBP_GROWTH, HSIAO_HOUSEKEEPING_GENES, MCBRYAN_PUBERTAL_TGFB1_TARGETS_UP, TGACCTY_ERR1_Q2, GOBP_REGULATION_OF_MEMBRANE_DEPOLARIZATION
GO Biological Process (8): muscle organ development (GO:0007517), animal organ morphogenesis (GO:0009887), negative regulation of G2/M transition of mitotic cell cycle (GO:0010972), cell differentiation (GO:0030154), negative regulation of cell growth (GO:0030308), regulation of atrial cardiac muscle cell membrane depolarization (GO:0060371), positive regulation of potassium ion transmembrane transport (GO:1901381), negative regulation of G1/S transition of mitotic cell cycle (GO:2000134)
GO Molecular Function (6): zinc ion binding (GO:0008270), transmembrane transporter binding (GO:0044325), channel activator activity (GO:0099103), potassium channel activator activity (GO:0099104), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (5): nucleus (GO:0005634), cytoplasm (GO:0005737), cytosol (GO:0005829), plasma membrane (GO:0005886), focal adhesion (GO:0005925)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| animal organ development | 2 |
| negative regulation of mitotic cell cycle phase transition | 2 |
| cellular anatomical structure | 2 |
| muscle structure development | 1 |
| anatomical structure morphogenesis | 1 |
| G2/M transition of mitotic cell cycle | 1 |
| regulation of G2/M transition of mitotic cell cycle | 1 |
| negative regulation of cell cycle G2/M phase transition | 1 |
| cellular developmental process | 1 |
| regulation of cell growth | 1 |
| cell growth | 1 |
| negative regulation of growth | 1 |
| negative regulation of cellular process | 1 |
| regulation of membrane depolarization | 1 |
| positive regulation of potassium ion transport | 1 |
| potassium ion transmembrane transport | 1 |
| regulation of potassium ion transmembrane transport | 1 |
| positive regulation of cation transmembrane transport | 1 |
| G1/S transition of mitotic cell cycle | 1 |
| negative regulation of cell cycle G1/S phase transition | 1 |
| regulation of G1/S transition of mitotic cell cycle | 1 |
| transition metal ion binding | 1 |
| protein binding | 1 |
| channel activity | 1 |
| channel regulator activity | 1 |
| transporter activator activity | 1 |
| potassium channel activity | 1 |
| potassium channel regulator activity | 1 |
| channel activator activity | 1 |
| binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cell-substrate junction | 1 |
Protein interactions and networks
STRING
1092 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FHL1 | RBPJ | Q06330 | 846 |
| FHL1 | INPP5A | Q14642 | 762 |
| FHL1 | EMD | P50402 | 707 |
| FHL1 | MYBPC3 | Q14896 | 690 |
| FHL1 | TTN | Q8WZ42 | 688 |
| FHL1 | MYBPC2 | Q14324 | 591 |
| FHL1 | IGFBP5 | P24593 | 588 |
| FHL1 | ENO1 | P06733 | 500 |
| FHL1 | MYOD1 | P15172 | 496 |
| FHL1 | FHL2 | Q14192 | 480 |
| FHL1 | DCUN1D5 | Q9BTE7 | 461 |
| FHL1 | MYOT | Q9UBF9 | 450 |
| FHL1 | GRIN2D | O15399 | 433 |
| FHL1 | TMEM43 | Q9BTV4 | 417 |
| FHL1 | PXN | P49023 | 411 |
IntAct
94 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PDLIM7 | BAG3 | psi-mi:“MI:0914”(association) | 0.800 |
| MAPK14 | OBSL1 | psi-mi:“MI:0914”(association) | 0.790 |
| CNOT3 | CNOT1 | psi-mi:“MI:0914”(association) | 0.740 |
| RHOA | CTSA | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| AKAP12 | FHL1 | psi-mi:“MI:0915”(physical association) | 0.670 |
| FHL1 | NRIP1 | psi-mi:“MI:0915”(physical association) | 0.630 |
| NRIP1 | FHL1 | psi-mi:“MI:0407”(direct interaction) | 0.630 |
| NRIP1 | FHL1 | psi-mi:“MI:0915”(physical association) | 0.630 |
| AKAP12 | HSPA12A | psi-mi:“MI:0914”(association) | 0.530 |
| ZNF71 | DKC1 | psi-mi:“MI:0914”(association) | 0.530 |
| GPS1 | PXDNL | psi-mi:“MI:0914”(association) | 0.530 |
| MANSC1 | SMPD2 | psi-mi:“MI:0914”(association) | 0.530 |
| FHL1 | SRPK1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| FHL1 | ESR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| FHL1 | ZNF16 | psi-mi:“MI:0915”(physical association) | 0.370 |
| FHL1 | DBN1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| FHL1 | DEAF1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| EED | FHL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| HES1 | FHL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| PDE4DIP | FHL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TXNIP | FHL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| C | FHL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| RBPJ | SAMD1 | psi-mi:“MI:0914”(association) | 0.350 |
| RBPJ | RPA2 | psi-mi:“MI:0914”(association) | 0.350 |
| JUN | psi-mi:“MI:0914”(association) | 0.350 | |
| JUN | TPM3 | psi-mi:“MI:0914”(association) | 0.350 |
| TANK | CNOT1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (245): SRF (Reconstituted Complex), EP300 (Affinity Capture-Western), CREBBP (Affinity Capture-Western), Nfatc1 (Reconstituted Complex), Nfatc1 (Affinity Capture-Western), Nfatc1 (Co-localization), TTN (Two-hybrid), FHL1 (Two-hybrid), MYBPC1 (Two-hybrid), MYBPC1 (Affinity Capture-Western), FHL1 (Reconstituted Complex), ESR1 (Affinity Capture-Western), AKT1 (Affinity Capture-Western), FHL1 (Affinity Capture-MS), FHL1 (Affinity Capture-MS)
ESM2 similar proteins: A0M8R4, O04193, O35115, O70433, O80839, P21291, P29675, P47875, P50238, P50461, P50462, P50463, P50464, P53777, P63254, P63255, P67966, P67967, P97315, P97447, Q07DY3, Q07DZ4, Q09YI0, Q13642, Q13643, Q14192, Q16527, Q1ECF5, Q2IBA3, Q2KI95, Q2QLF4, Q2YDK0, Q32LE9, Q3MHY1, Q3ZBI6, Q4R7A4, Q4U0T9, Q500W4, Q56K04, Q5RC52
Diamond homologs: A0A1L8F1M4, A0M8R4, A0M8S5, A0M8U6, A1Z6W3, A8WH69, O35115, O43294, O43900, O60711, O70433, O94929, P47226, P48059, P49023, P49024, P50464, P97447, Q00PK1, Q07DW1, Q07DX3, Q07DY3, Q07DZ4, Q07E27, Q07E40, Q07E51, Q09476, Q09YI0, Q09YJ2, Q09YK3, Q09YL5, Q09YN8, Q108U9, Q13642, Q13643, Q14192, Q174I2, Q17QE2, Q28FG2, Q292U2
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| RING1 | up-regulates | FHL1 | binding |
| PIAS1 | down-regulates | FHL1 | sumoylation |
| SRC | “up-regulates activity” | FHL1 | phosphorylation |
| FHL1 | down-regulates | RBPJ | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
673 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 75 |
| Likely pathogenic | 22 |
| Uncertain significance | 263 |
| Likely benign | 186 |
| Benign | 17 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1071343 | NM_001159699.2(FHL1):c.243C>A (p.Cys81Ter) | Pathogenic |
| 1071860 | NC_000023.10:g.(?135288556)(135293528_?)del | Pathogenic |
| 1074316 | NM_001159699.2(FHL1):c.590G>A (p.Trp197Ter) | Pathogenic |
| 11547 | NM_001159699.2(FHL1):c.413G>C (p.Trp138Ser) | Pathogenic |
| 11549 | NM_001159699.2(FHL1):c.428_430dup (p.Phe143_Thr144insIle) | Pathogenic |
| 11550 | NM_001159699.2(FHL1):c.415C>T (p.His139Tyr) | Pathogenic |
| 11551 | NM_001159699.2(FHL1):c.443G>T (p.Cys148Phe) | Pathogenic |
| 11554 | NM_001159699.2(FHL1):c.497G>A (p.Cys166Tyr) | Pathogenic |
| 11555 | NM_001159699.2(FHL1):c.358T>C (p.Cys120Arg) | Pathogenic |
| 11556 | NM_001159699.2(FHL1):c.889T>G (p.Ter297Glu) | Pathogenic |
| 11557 | NM_001159699.2(FHL1):c.673T>C (p.Cys225Arg) | Pathogenic |
| 11558 | NM_001159699.2(FHL1):c.865dup (p.Cys289fs) | Pathogenic |
| 11559 | NM_001159702.3(FHL1):c.838G>A (p.Val280Met) | Pathogenic |
| 11560 | NM_001159699.2(FHL1):c.736+1G>A | Pathogenic |
| 11561 | NM_001159699.2(FHL1):c.416A>T (p.His139Leu) | Pathogenic |
| 11562 | NM_001159699.2(FHL1):c.417C>G (p.His139Gln) | Pathogenic |
| 11563 | NM_001159699.2(FHL1):c.499_507del (p.Val167_Cys169del) | Pathogenic |
| 1184470 | NM_001159699.2(FHL1):c.708_736+22del | Pathogenic |
| 1322915 | NM_001159699.2(FHL1):c.519dup (p.Phe174fs) | Pathogenic |
| 1359487 | NM_001159699.2(FHL1):c.55G>T (p.Glu19Ter) | Pathogenic |
| 1363228 | NM_001159699.2(FHL1):c.414del (p.Trp138fs) | Pathogenic |
| 1392309 | NM_001159699.2(FHL1):c.417C>A (p.His139Gln) | Pathogenic |
| 1404846 | NM_001159699.2(FHL1):c.505T>A (p.Cys169Ser) | Pathogenic |
| 1457116 | NM_001159699.2(FHL1):c.618del (p.Cys207fs) | Pathogenic |
| 1457827 | NM_001159699.2(FHL1):c.288del (p.Phe96fs) | Pathogenic |
| 1458011 | NM_001159699.2(FHL1):c.441del (p.Cys148fs) | Pathogenic |
| 1459000 | NM_001159699.2(FHL1):c.875G>A (p.Cys292Tyr) | Pathogenic |
| 1500210 | NM_001159699.2(FHL1):c.736+1G>C | Pathogenic |
| 1506742 | NM_001159699.2(FHL1):c.863_864dup (p.Cys289fs) | Pathogenic |
| 1958260 | NM_001159699.2(FHL1):c.801delinsAA (p.His267fs) | Pathogenic |
SpliceAI
1036 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:136206404:CAGGT:C | acceptor_loss | 1.0000 |
| X:136206405:A:AG | acceptor_gain | 1.0000 |
| X:136206405:A:C | acceptor_loss | 1.0000 |
| X:136206406:G:GA | acceptor_gain | 1.0000 |
| X:136206406:GGT:G | acceptor_gain | 1.0000 |
| X:136206406:GGTC:G | acceptor_gain | 1.0000 |
| X:136206588:GGTA:G | donor_loss | 1.0000 |
| X:136206589:GTA:G | donor_loss | 1.0000 |
| X:136206590:T:A | donor_loss | 1.0000 |
| X:136207006:T:TA | acceptor_gain | 1.0000 |
| X:136207007:G:A | acceptor_gain | 1.0000 |
| X:136207011:TCCA:T | acceptor_loss | 1.0000 |
| X:136207014:A:AG | acceptor_gain | 1.0000 |
| X:136207014:AG:A | acceptor_gain | 1.0000 |
| X:136207014:AGGAG:A | acceptor_gain | 1.0000 |
| X:136207015:G:GT | acceptor_gain | 1.0000 |
| X:136207015:GG:G | acceptor_gain | 1.0000 |
| X:136207015:GGA:G | acceptor_gain | 1.0000 |
| X:136207015:GGAGG:G | acceptor_gain | 1.0000 |
| X:136207188:CAG:C | donor_loss | 1.0000 |
| X:136207189:AG:A | donor_loss | 1.0000 |
| X:136207191:G:GA | donor_loss | 1.0000 |
| X:136207192:T:A | donor_loss | 1.0000 |
| X:136207787:T:TA | acceptor_gain | 1.0000 |
| X:136207788:GCA:G | acceptor_loss | 1.0000 |
| X:136207789:CA:C | acceptor_loss | 1.0000 |
| X:136207790:A:AC | acceptor_loss | 1.0000 |
| X:136207790:A:AG | acceptor_gain | 1.0000 |
| X:136207791:G:GT | acceptor_gain | 1.0000 |
| X:136207791:GGA:G | acceptor_gain | 1.0000 |
AlphaMissense
1998 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:136206552:T:G | C40W | 1.000 |
| X:136208515:T:C | C188R | 1.000 |
| X:136208517:T:G | C188W | 1.000 |
| X:136208551:T:C | F200L | 1.000 |
| X:136208553:C:A | F200L | 1.000 |
| X:136208553:C:G | F200L | 1.000 |
| X:136206451:T:A | C7S | 0.999 |
| X:136206451:T:C | C7R | 0.999 |
| X:136206452:G:C | C7S | 0.999 |
| X:136206453:C:G | C7W | 0.999 |
| X:136206514:T:C | C28R | 0.999 |
| X:136206523:T:A | C31S | 0.999 |
| X:136206523:T:C | C31R | 0.999 |
| X:136206524:G:C | C31S | 0.999 |
| X:136206525:C:G | C31W | 0.999 |
| X:136206526:T:C | F32L | 0.999 |
| X:136206528:T:A | F32L | 0.999 |
| X:136206528:T:G | F32L | 0.999 |
| X:136206550:T:A | C40S | 0.999 |
| X:136206550:T:C | C40R | 0.999 |
| X:136206551:G:A | C40Y | 0.999 |
| X:136206551:G:C | C40S | 0.999 |
| X:136206551:G:T | C40F | 0.999 |
| X:136206559:T:A | C43S | 0.999 |
| X:136206559:T:C | C43R | 0.999 |
| X:136206560:G:C | C43S | 0.999 |
| X:136207040:T:A | W61R | 0.999 |
| X:136207040:T:C | W61R | 0.999 |
| X:136207052:T:C | C65R | 0.999 |
| X:136207053:G:A | C65Y | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000001684 (X:136167626 T>G), RS1000063544 (X:136150756 C>T), RS1000095235 (X:136160748 A>C,G), RS1000169066 (X:136160299 C>T), RS1000224196 (X:136173751 T>G), RS1000246296 (X:136186274 C>G), RS1000284030 (X:136171945 C>T), RS1000365223 (X:136178034 T>A,G), RS1000369998 (X:136182935 A>G), RS1000419246 (X:136177568 T>C), RS1000552873 (X:136147686 C>T), RS1000596854 (X:136186669 A>G), RS1000637400 (X:136196279 C>T), RS1000689875 (X:136195430 G>A), RS1000736016 (X:136169269 G>A)
Disease associations
OMIM: gene MIM:300163 | disease phenotypes: MIM:300696, MIM:300280, MIM:300695, MIM:300717, MIM:300718, MIM:300243, MIM:160150, MIM:267700, MIM:192600, MIM:310300
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| X-linked myopathy with postural muscle atrophy | Definitive | X-linked |
| myopathy, reducing body, X-linked, early-onset, severe | Strong | X-linked |
| FHL1-related myopathy | Strong | X-linked |
| X-linked scapuloperoneal muscular dystrophy | Supportive | X-linked |
| reducing body myopathy | Supportive | X-linked |
| X-linked Emery-Dreifuss muscular dystrophy | Supportive | X-linked |
Mondo (15): X-linked myopathy with postural muscle atrophy (MONDO:0010401), Uruguay Faciocardiomusculoskeletal syndrome (MONDO:0010292), X-linked scapuloperoneal muscular dystrophy (MONDO:0010400), myopathy, reducing body, X-linked, early-onset, severe (MONDO:0010414), myopathy, reducing body, X-linked, childhood-onset (MONDO:0010415), Christianson syndrome (MONDO:0010278), centronuclear myopathy (MONDO:0018947), Emery-Dreifuss muscular dystrophy 6, X-linked (MONDO:0800318), familial hemophagocytic lymphohistiocytosis type 1 (MONDO:0009974), familial hypertrophic cardiomyopathy (MONDO:0024573), Emery-Dreifuss muscular dystrophy (MONDO:0016830), hypertrophic cardiomyopathy (MONDO:0005045), reducing body myopathy (MONDO:0019948), X-linked Emery-Dreifuss muscular dystrophy (MONDO:0010680), FHL1-related myopathy (MONDO:0800462)
Orphanet (10): X-linked myopathy with postural muscle atrophy (Orphanet:178461), X-linked scapuloperoneal muscular dystrophy (Orphanet:431272), Reducing body myopathy (Orphanet:97239), Christianson syndrome (Orphanet:85278), Centronuclear myopathy (Orphanet:595), Familial hemophagocytic lymphohistiocytosis (Orphanet:540), Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Emery-Dreifuss muscular dystrophy (Orphanet:261), Rare hypertrophic cardiomyopathy (Orphanet:217569), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155)
HPO phenotypes
120 total (30 of 120 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000232 | Everted lower lip vermilion |
| HP:0000244 | Brachyturricephaly |
| HP:0000278 | Retrognathia |
| HP:0000336 | Prominent supraorbital ridges |
| HP:0000339 | Pugilistic facies |
| HP:0000358 | Posteriorly rotated ears |
| HP:0000369 | Low-set ears |
| HP:0000445 | Wide nose |
| HP:0000448 | Prominent nose |
| HP:0000470 | Short neck |
| HP:0000475 | Broad neck |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000508 | Ptosis |
| HP:0000574 | Thick eyebrow |
| HP:0000664 | Synophrys |
| HP:0000767 | Pectus excavatum |
| HP:0000912 | Sprengel anomaly |
| HP:0001169 | Broad palm |
| HP:0001249 | Intellectual disability |
| HP:0001252 | Hypotonia |
| HP:0001265 | Hyporeflexia |
| HP:0001284 | Areflexia |
| HP:0001288 | Gait disturbance |
| HP:0001315 | Reduced tendon reflexes |
| HP:0001371 | Flexion contracture |
| HP:0001374 | Congenital hip dislocation |
| HP:0001387 | Joint stiffness |
| HP:0001417 | X-linked inheritance |
| HP:0001419 | X-linked recessive inheritance |
| HP:0001423 | X-linked dominant inheritance |
GWAS associations
0 associations (top):
MeSH disease descriptors (8)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002312 | Cardiomyopathy, Hypertrophic | C14.280.238.100; C14.280.484.048.750.070.160 |
| D024741 | Cardiomyopathy, Hypertrophic, Familial | C14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160 |
| D020389 | Muscular Dystrophy, Emery-Dreifuss | C05.651.534.500.350; C10.668.491.175.500.350; C16.320.322.625; C16.320.577.350 |
| D000083143 | X-Linked Emery-Dreifuss Muscular Dystrophy | C05.651.534.500.350.500; C10.668.491.175.500.350.500; C16.320.322.625.500; C16.320.577.350.500 |
| C567484 | Mental Retardation, X-Linked, Syndromic, Christianson Type (supp.) | |
| C567468 | Myopathy, Reducing Body, X-Linked, Childhood-Onset (supp.) | |
| C567469 | Myopathy, Reducing Body, X-Linked, Early-Onset, Severe (supp.) | |
| C564544 | Uruguay Faciocardiomusculoskeletal Syndrome (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
79 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, increases methylation | 4 |
| Valproic Acid | affects expression, decreases methylation, increases expression | 4 |
| bisphenol S | decreases methylation, increases expression | 2 |
| Doxorubicin | decreases expression, affects expression | 2 |
| Estradiol | affects cotreatment, decreases expression, increases expression, decreases reaction | 2 |
| Nickel | decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| 6-hydroxy-5-((p- sulfophenyl)azo)-2-naphthalenesulfonic acid disodium salt | affects cotreatment, increases expression | 1 |
| pirinixic acid | affects binding, increases activity, increases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| beta-lapachone | increases expression | 1 |
| sulforaphane | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| doxifluridine | decreases response to substance | 1 |
| manganese chloride | decreases expression | 1 |
| potassium chromate(VI) | decreases expression | 1 |
| 1-UFT protocol | decreases response to substance | 1 |
| S-(1,2-dichlorovinyl)cysteine | decreases expression, affects cotreatment | 1 |
| S 1 (combination) | decreases response to substance | 1 |
| CGP 52608 | increases reaction, affects binding | 1 |
| chloropicrin | decreases expression | 1 |
| entinostat | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | decreases expression | 1 |
Cellosaurus cell lines
7 cell lines: 4 cancer cell line, 2 induced pluripotent stem cell, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1S4 | Abcam HeLa FHL1 KO | Cancer cell line | Female |
| CVCL_C9LI | INEUi003-A | Induced pluripotent stem cell | Male |
| CVCL_C9LJ | INEUi004-A | Induced pluripotent stem cell | Female |
| CVCL_D7PW | Ubigene A-549 FHL1 KO | Cancer cell line | Male |
| CVCL_D8LE | Ubigene HCT 116 FHL1 KO | Cancer cell line | Male |
| CVCL_D9EW | Ubigene HEK293 FHL1 KO | Transformed cell line | Female |
| CVCL_E0D3 | Ubigene HeLa FHL1 KO | Cancer cell line | Female |
Clinical trials (associated diseases)
243 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00879060 | PHASE4 | COMPLETED | Clinical and Therapeutic Implications of Fibrosis in Hypertrophic Cardiomyopathy |
| NCT01721967 | PHASE4 | COMPLETED | Ranolazine for the Treatment of Chest Pain in HCM Patients |
| NCT02948998 | PHASE4 | UNKNOWN | Evaluating the Effect of Spironolactone on Hypertrophic Cardiomyopathy |
| NCT03249272 | PHASE4 | TERMINATED | Microvascular Dysfunction in Nonischemic Cardiomyopathy: Insights From CMR Assessment of Coronary Flow Reserve |
| NCT04133532 | PHASE4 | COMPLETED | Effect of Metoprolol in Post Alcohol Septal Ablation Patients With Hypertrophic Cardiomyopathy |
| NCT06401343 | PHASE4 | RECRUITING | Use of SGLT2i in noHCM With HFpEF |
| NCT07103655 | PHASE4 | NOT_YET_RECRUITING | The Therapeutic Value of Mavacamten in Hypertrophic Cardiomyopathy With Mid-to-Apical Left Ventricular Obstruction |
| NCT07600177 | PHASE4 | RECRUITING | Mavacamten to Aficamten Transition in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT00317967 | PHASE3 | COMPLETED | Study to Determine if Atorvastatin Reduces Size and Stiffness of Muscle in the Left Ventricle of the Heart |
| NCT00698074 | PHASE3 | UNKNOWN | Diastolic Ventricular Interaction and the Effects of Biventricular Pacing in Hypertrophic Cardiomyopathy |
| NCT00821353 | PHASE3 | COMPLETED | Antiarrhythmic Therapy Versus Catheter Ablation for Atrial Fibrillation in Hypertrophic Cardiomyopathy |
| NCT02431221 | PHASE3 | WITHDRAWN | Efficacy, Safety, and Tolerability of Perhexiline in Subjects With Hypertrophic Cardiomyopathy and Heart Failure |
| NCT03470545 | PHASE3 | COMPLETED | Clinical Study to Evaluate Mavacamten (MYK-461) in Adults With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT05174416 | PHASE3 | COMPLETED | A Study to Evaluate the Efficacy and Safety of Mavacamten in Chinese Adults With Symptomatic Obstructive HCM |
| NCT05182658 | PHASE3 | ACTIVE_NOT_RECRUITING | Empagliflozin in Hypertrophic Cardiomyopathy |
| NCT05186818 | PHASE3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Placebo in Adults With Symptomatic oHCM |
| NCT05767346 | PHASE3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Metoprolol Succinate in Adults With Symptomatic oHCM |
| NCT06116968 | PHASE3 | COMPLETED | An Open-Label Study of Aficamten for Chinese Patients With Symptomatic oHCM |
| NCT06873828 | PHASE3 | NOT_YET_RECRUITING | Evaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter MonitoringEvaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter Monitoring |
| NCT07021976 | PHASE3 | RECRUITING | A Phase III Trial of HRS-1893 in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT07023341 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study to Learn More About How Well Aficamten Works in Japanese Participants With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT07202897 | PHASE3 | NOT_YET_RECRUITING | LA-HCM Study : Rivaroxaban for Antithrombotic Prevention in Hypertrophic Cardiomyopathy Patients With Abnormal Left Atrial Strain. |
| NCT00368355 | PHASE2 | COMPLETED | T Cell Depletion for Recipients of HLA Haploidentical Related Donor Stem Cell Grafts |
| NCT00001631 | PHASE2 | COMPLETED | Study of Blood Flow in Heart Muscle |
| NCT00001894 | PHASE2 | COMPLETED | A Comparison of Two Treatments: Pacemaker and Percutaneous Transluminal Septal Ablation for Hypertrophic Cardiomyopathy |
| NCT00001960 | PHASE2 | COMPLETED | Studying the Effectiveness of Pacemaker Therapy in Children Who Have Thickened Heart Muscle |
| NCT00011076 | PHASE2 | COMPLETED | Pirfenidone to Treat Hypertrophic Cardiomyopathy |
| NCT00035386 | PHASE2 | COMPLETED | Alcohol Septal Ablation in Obstructive Hypertrophic Cardiomyopathy: A Pilot Study |
| NCT00430833 | PHASE2 | UNKNOWN | CHANCE - Candesartan in Hypertrophic Cardiomyopathy |
| NCT00500552 | PHASE2 | COMPLETED | Perhexiline Therapy in Patients With Hypertrophic Cardiomyopathy |
| NCT01150461 | PHASE2 | COMPLETED | Effect of Losartan in Patients With Nonobstructive Hypertrophic Cardiomyopathy |
| NCT01230918 | PHASE2 | TERMINATED | Study to Develop a Non-invasive Marker for Monitoring Myocardial Fibrosis |
| NCT01447654 | PHASE2 | COMPLETED | Inhibition of the Renin Angiotensin System With Losartan in Patients With Hypertrophic Cardiomyopathy |
| NCT01696370 | PHASE2 | UNKNOWN | Trimetazidine Therapy in Hypertrophic Cardiomyopathy |
| NCT01912534 | PHASE2 | COMPLETED | Valsartan for Attenuating Disease Evolution In Early Sarcomeric HCM |
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Related Atlas pages
- Associated diseases: X-linked myopathy with postural muscle atrophy, myopathy, reducing body, X-linked, early-onset, severe, X-linked scapuloperoneal muscular dystrophy, reducing body myopathy, X-linked Emery-Dreifuss muscular dystrophy, FHL1-related myopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): centronuclear myopathy, Christianson syndrome, Emery-Dreifuss muscular dystrophy, Emery-Dreifuss muscular dystrophy 6, X-linked, familial hemophagocytic lymphohistiocytosis type 1, familial hypertrophic cardiomyopathy, FHL1-related myopathy, myopathy, reducing body, X-linked, childhood-onset, myopathy, reducing body, X-linked, early-onset, severe, reducing body myopathy, Uruguay Faciocardiomusculoskeletal syndrome, X-linked Emery-Dreifuss muscular dystrophy, X-linked myopathy with postural muscle atrophy, X-linked scapuloperoneal muscular dystrophy