FIGNL2-DT

Summary

FIGNL2-DT (FIGNL2 divergent transcript, HGNC:53299) is a long non-coding RNA gene on chromosome 12q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53299
Approved symbol	FIGNL2-DT
Name	FIGNL2 divergent transcript
Location	12q13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259887
Ensembl biotype	lncRNA
Entrez	105369971
RNAcentral	URS00001EA289 — lncRNA, 427 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000562996, ENST00000782988, ENST00000782989, ENST00000782990, ENST00000782991, ENST00000782992

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562996 — 3 exons

Exon	Start	End
ENSE00002580245	51848223	51848563
ENSE00002616804	51850261	51850310
ENSE00002618905	51852694	51852729

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 78.00.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	78.00	gold quality
metanephros cortex	UBERON:0010533	71.64	gold quality
tibial nerve	UBERON:0001323	70.66	gold quality
colonic epithelium	UBERON:0000397	70.33	gold quality
cortex of kidney	UBERON:0001225	67.97	gold quality
kidney	UBERON:0002113	62.61	gold quality
adult mammalian kidney	UBERON:0000082	62.20	gold quality
lymph node	UBERON:0000029	60.92	gold quality
ectocervix	UBERON:0012249	60.77	gold quality
skeletal muscle tissue	UBERON:0001134	60.69	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.53	gold quality
uterine cervix	UBERON:0000002	60.43	gold quality
gall bladder	UBERON:0002110	59.69	gold quality
endocervix	UBERON:0000458	59.08	gold quality
Brodmann (1909) area 9	UBERON:0013540	58.06	gold quality
liver	UBERON:0002107	58.02	gold quality
right lung	UBERON:0002167	57.90	gold quality
myometrium	UBERON:0001296	57.18	gold quality
thoracic mammary gland	UBERON:0005200	57.15	gold quality
right lobe of liver	UBERON:0001114	56.90	gold quality
prefrontal cortex	UBERON:0000451	56.33	gold quality
calcaneal tendon	UBERON:0003701	56.32	gold quality
stromal cell of endometrium	CL:0002255	56.30	gold quality
primary visual cortex	UBERON:0002436	56.09	gold quality
smooth muscle tissue	UBERON:0001135	55.90	gold quality
blood	UBERON:0000178	55.44	gold quality
duodenum	UBERON:0002114	55.44	gold quality
body of uterus	UBERON:0009853	55.42	gold quality
bone marrow	UBERON:0002371	55.14	gold quality
subcutaneous adipose tissue	UBERON:0002190	54.84	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.52

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.