FKBP1B

gene
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Also known as OTK4FKBP12.6PPIaseFKBP9

Summary

FKBP1B (FKBP prolyl isomerase 1B, HGNC:3712) is a protein-coding gene on chromosome 2p23.3, encoding Peptidyl-prolyl cis-trans isomerase FKBP1B (P68106). Has the potential to contribute to the immunosuppressive and toxic effects of FK506 and rapamycin.

The protein encoded by this gene is a member of the immunophilin protein family, which play a role in immunoregulation and basic cellular processes involving protein folding and trafficking. This encoded protein is a cis-trans prolyl isomerase that binds the immunosuppressants FK506 and rapamycin. It is highly similar to the FK506-binding protein 1A. Its physiological role is thought to be in excitation-contraction coupling in cardiac muscle. There are two alternatively spliced transcript variants of this gene encoding different isoforms.

Source: NCBI Gene 2281 — RefSeq curated summary.

At a glance

  • GWAS associations: 11
  • Clinical variants (ClinVar): 123 total
  • Druggable target: yes — 3 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_004116

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:3712
Approved symbolFKBP1B
NameFKBP prolyl isomerase 1B
Location2p23.3
Locus typegene with protein product
StatusApproved
AliasesOTK4, FKBP12.6, PPIase, FKBP9
Ensembl geneENSG00000119782
Ensembl biotypeprotein_coding
OMIM600620
Entrez2281

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 3 protein_coding, 2 nonsense_mediated_decay, 1 retained_intron

ENST00000380986, ENST00000380991, ENST00000421839, ENST00000438630, ENST00000452109, ENST00000496149

RefSeq mRNA: 4 — MANE Select: NM_004116 NM_001322963, NM_001322964, NM_004116, NM_054033

CCDS: CCDS1706, CCDS33153, CCDS82423

Canonical transcript exons

ENST00000380986 — 4 exons

ExonStartEnd
ENSE000016302052404974124049886
ENSE000034721532406081424060926
ENSE000035083252406306424063681
ENSE000036487492405390224053949

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 96.73.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 12.2486 / max 203.0264, expressed in 1482 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter IDTPM avgSamples expressed
191699.27321425
191682.97541039

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
cortical plateUBERON:000534396.73gold quality
nucleus accumbensUBERON:000188295.85gold quality
caudate nucleusUBERON:000187395.51gold quality
putamenUBERON:000187495.39gold quality
Ammon’s hornUBERON:000195494.91gold quality
anterior cingulate cortexUBERON:000983594.76gold quality
temporal lobeUBERON:000187194.25gold quality
amygdalaUBERON:000187694.22gold quality
dorsolateral prefrontal cortexUBERON:000983494.00gold quality
right frontal lobeUBERON:000281093.86gold quality
cerebral cortexUBERON:000095693.71gold quality
superior frontal gyrusUBERON:000266193.57gold quality
frontal cortexUBERON:000187093.24gold quality
Brodmann (1909) area 9UBERON:001354093.23gold quality
prefrontal cortexUBERON:000045192.90gold quality
brainUBERON:000095591.89gold quality
cerebellar cortexUBERON:000212991.55gold quality
cerebellar hemisphereUBERON:000224591.55gold quality
cerebellumUBERON:000203791.52gold quality
right hemisphere of cerebellumUBERON:001489091.35gold quality
hypothalamusUBERON:000189891.10gold quality
duodenumUBERON:000211490.25gold quality
primary visual cortexUBERON:000243690.05gold quality
substantia nigraUBERON:000203889.65gold quality
ganglionic eminenceUBERON:000402387.46gold quality
lower esophagus mucosaUBERON:003583486.50gold quality
body of stomachUBERON:000116186.49gold quality
right lungUBERON:000216786.15gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099184.69gold quality
fundus of stomachUBERON:000116084.50gold quality

Single-cell (SCXA)

Detected in 3 experiment(s), a significant marker in 3.

ExperimentMarker?Max mean expression
E-HCAD-56yes1307.41
E-HCAD-13yes8.56
E-ANND-3yes7.47

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): SP3

miRNA regulators (miRDB)

37 targeting FKBP1B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6867-5P100.0082.213464
HSA-MIR-449A99.9971.051776
HSA-MIR-34A-5P99.9971.211784
HSA-MIR-449B-5P99.9770.261580
HSA-MIR-34C-5P99.9770.451577
HSA-MIR-3663-3P99.8470.39798
HSA-MIR-34B-5P99.7867.561175
HSA-MIR-449C-5P99.7867.631168
HSA-MIR-548AG99.7769.251492
HSA-MIR-2682-5P99.7367.381055
HSA-MIR-548AI99.6969.241494
HSA-MIR-548BA99.6969.141514
HSA-MIR-570-5P99.6969.241494
HSA-MIR-5004-5P99.6866.631294
HSA-MIR-4690-5P99.6566.24813
HSA-MIR-182799.6368.573265
HSA-MIR-451B99.5568.281380
HSA-MIR-3120-3P99.5470.282669
HSA-MIR-766-3P99.4765.241811
HSA-MIR-4797-5P99.3968.011354
HSA-MIR-542-3P99.3467.581270
HSA-MIR-149-5P99.2567.161315
HSA-MIR-670-3P99.0368.882404
HSA-MIR-4711-5P98.8968.00965
HSA-MIR-6501-3P98.7167.451480
HSA-MIR-147A98.3366.40795
HSA-MIR-4772-3P98.0465.601203
HSA-MIR-446898.0166.851187
HSA-MIR-430398.0168.132304
HSA-MIR-7112-3P97.6768.77948

Literature-anchored findings (GeneRIF, showing 23)

  • localization of binding site to the NH2-terminal domain of the cardiac Ca2+ release channel (PMID:12446682)
  • Data show that VTSIP- and ARVD2-associated point mutations influence positively and negatively, respectively, the binding of RyR2 to its gating protein FKBP12.6. (PMID:12459180)
  • data demonstrate that defective regulation of ryanodine receptor 2 causes altered cellular phenotype via profound perturbations in intracellular calcium signaling and highlight a key modulatory role of FK506 binding protein 12.6 (PMID:12754204)
  • FKBP1B gene is involved in the genetic susceptibility to the AITDs development in the studied family. (PMID:15497458)
  • novel interaction site for FKBP12.6 may be present at the RyR2 C terminus, proximal to the channel pore, a sterically appropriate location that would enable this protein to play a central role in the modulation of this critical ion channel (PMID:15591045)
  • FKBP12.6 plays a critical role in Ca channel gating, the R2401H mutation can be expected to alter Ca-induced Ca release and E-C coupling resulting in CPVT. (PMID:15749201)
  • Enhancing calstabin binding to ryanodine receptors improves cardiac and skeletal muscle function in heart failure. (PMID:15972811)
  • the redox state of the RyR is intimately connected with FKBP binding affinity. (PMID:17200109)
  • Data show that K201 abolished spontaneous calcium release in cardiac myocytes, and that treating ventricular myocytes with FK506 to dissociate FKBP12.6 from ryanodine receptor RyR2 did not affect the suppression of spontaneous Ca2+ release by K201. (PMID:17313373)
  • Results describe abrupt changes in the expression of FKBP12.6, SERCA2a, PKA, and ECE on reperfusion against ischemia, which are responsible for the rapid occurrence of ventricular fibrillation, and their prevention by CPU86017. (PMID:17506935)
  • the loss of FKBP12.6 has no significant effect on the conduction and activation of RyR2 or the propensity for spontaneous Ca(2+) release and stress-induced ventricular arrhythmias (PMID:17921453)
  • The findings suggest that FKBP12.6 regulation of RyR2 is unlikely to be the primary defect in inherited arrhythmogenic cardiac disease. (PMID:19226252)
  • analysis of the ryanodine receptor FK506-binding protein subunit (PMID:20404344)
  • Characterize the kinetics of FKBP12/12.6 binding to RyR2 in ventricular myocytes and effects on calcium signaling. (PMID:20431056)
  • FKBP12.6-deficient mice with cardiac hypertrophy do not display exercise-induced arrhythmia and/or sudden cardiac death. (PMID:22087651)
  • These data corroborate other studies suggesting that mutations in FKBP12 and FKBP12.6 genes are not commonly related to cardiac diseases. (PMID:22236651)
  • Sirolimus-FKBP12.6 impairs endothelial barrier function by activation of protein kinase C-alpha and downstream disruption of the p120-VE cadherin interaction in vascular endothelium. (PMID:23887639)
  • RyRs have been identified as important targets of FKBP12 and FKBP12.6, members of the immunophilin family (PMID:26009182)
  • How phosphorylation of RyR affects channel activity and whether proteins such as the FK-506 binding proteins (FKBP12 and FKBP12.6) are involved in heart failure (PMID:26009186)
  • results suggest that both FKBP12.6 and FKBP12 play critical roles in regulating RyR2 function by facilitating the termination of SOICR. (PMID:27154203)
  • Total chemical synthesis, refolding, and crystallographic structure of fully active immunophilin calstabin 2 (PMID:27670942)
  • Our FRET-based HTS detects RyR binding of accessory proteins calmodulin (CaM) or FKBP12.6…One compound increased FRET and inhibited RyR1, which was only significant at nM [Ca(2+)], and accentuated without CaM present. (PMID:27760856)
  • Rieske iron-sulfur protein induces FKBP12.6/RyR2 complex remodeling and subsequent pulmonary hypertension through NF-kappaB/cyclin D1 pathway. (PMID:32669538)

Cross-species orthologs

6 orthologs

OrganismSymbolGene ID
danio_reriofkbp1bENSDARG00000052625
mus_musculusFkbp1bENSMUSG00000020635
rattus_norvegicusFkbp1bENSRNOG00000047143
drosophila_melanogasterFkbp12FBGN0013954
caenorhabditis_elegansWBGENE00001429
caenorhabditis_elegansfkb-5WBGENE00001430

Paralogs (18): FKBP4 (ENSG00000004478), FKBP6 (ENSG00000077800), FKBP7 (ENSG00000079150), FKBP1A (ENSG00000088832), FKBP5 (ENSG00000096060), FKBP3 (ENSG00000100442), FKBP8 (ENSG00000105701), FKBP14 (ENSG00000106080), FKBP15 (ENSG00000119321), FKBP9 (ENSG00000122642), TTC9 (ENSG00000133985), FKBP11 (ENSG00000134285), FKBP10 (ENSG00000141756), TTC9C (ENSG00000162222), FKBP2 (ENSG00000173486), TTC9B (ENSG00000174521), FKBP1C (ENSG00000198225), FKBPL (ENSG00000204315)

Protein

Protein identifiers

Peptidyl-prolyl cis-trans isomerase FKBP1BP68106 (reviewed: P68106)

Alternative names: 12.6 kDa FK506-binding protein, FK506-binding protein 1B, Immunophilin FKBP12.6, Rotamase, h-FKBP-12

All UniProt accessions (4): P68106, F8W6G9, G5E9U6, H7C0Y3

UniProt curated annotations — full annotation on UniProt →

Function. Has the potential to contribute to the immunosuppressive and toxic effects of FK506 and rapamycin. PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Subunit / interactions. Identified in a complex composed of RYR2, FKBP1B, PKA catalytic subunit, PRKAR2A, AKAP6, and the protein phosphatases PP2A and PP1. Interacts directly with RYR2.

Subcellular location. Cytoplasm. Sarcoplasmic reticulum.

Tissue specificity. Detected in heart muscle (at protein level). Isoform 1 and isoform 2 are ubiquitous with highest levels in brain and thymus.

Activity regulation. Inhibited by both FK506 and rapamycin.

Similarity. Belongs to the FKBP-type PPIase family. FKBP1 subfamily.

Isoforms (2)

UniProt IDNamesCanonical?
P68106-11yes
P68106-22

RefSeq proteins (4): NP_001309892, NP_001309893, NP_004107, NP_473374 (=MANE)

Domains & families (InterPro)

IDNameType
IPR001179PPIase_FKBP_domDomain
IPR046357PPIase_dom_sfHomologous_superfamily
IPR050689FKBP-type_PPIaseFamily

Pfam: PF00254

Catalyzed reactions (Rhea), 1 shown:

  • [protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0) (RHEA:16237)

UniProt features (15 total): strand 6, turn 4, helix 2, chain 1, domain 1, splice variant 1

Structure

Experimental structures (PDB)

118 structures, top 30 by resolution.

PDBMethodResolution (Å)
5HKGX-RAY DIFFRACTION1.5
4IQ2X-RAY DIFFRACTION1.7
4IQCX-RAY DIFFRACTION1.9
1C9HX-RAY DIFFRACTION2
4C02X-RAY DIFFRACTION2.17
7U9XELECTRON MICROSCOPY2.58
7U9TELECTRON MICROSCOPY2.68
7UA5ELECTRON MICROSCOPY2.83
8UXCELECTRON MICROSCOPY2.86
9C1EELECTRON MICROSCOPY2.89
7UA4ELECTRON MICROSCOPY2.93
7UA3ELECTRON MICROSCOPY2.97
8UQ2ELECTRON MICROSCOPY2.98
7UA1ELECTRON MICROSCOPY2.99
8UXGELECTRON MICROSCOPY3.08
7U9QELECTRON MICROSCOPY3.11
9OL6ELECTRON MICROSCOPY3.11
8UXLELECTRON MICROSCOPY3.12
8UXFELECTRON MICROSCOPY3.13
8UQ3ELECTRON MICROSCOPY3.18
9C1FELECTRON MICROSCOPY3.22
9CGQELECTRON MICROSCOPY3.23
6WOUELECTRON MICROSCOPY3.27
7U9ZELECTRON MICROSCOPY3.29
8UXIELECTRON MICROSCOPY3.29
7VMLELECTRON MICROSCOPY3.3
7VMRELECTRON MICROSCOPY3.3
9KDFELECTRON MICROSCOPY3.3
9KDGELECTRON MICROSCOPY3.33
9CGPELECTRON MICROSCOPY3.34

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P68106-F194.980.97

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-2672351Stimuli-sensing channels
R-HSA-5578775Ion homeostasis

MSigDB gene sets: 434 (showing top): GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_UP, GOBP_NEGATIVE_REGULATION_OF_TRANSMEMBRANE_TRANSPORT, GOBP_POSITIVE_REGULATION_OF_SEQUESTERING_OF_CALCIUM_ION, MULLIGHAN_NPM1_SIGNATURE_3_UP, FAELT_B_CLL_WITH_VH_REARRANGEMENTS_DN, GOBP_REGULATION_OF_CALCIUM_MEDIATED_SIGNALING, GOBP_CIRCULATORY_SYSTEM_PROCESS, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN, KAAB_FAILED_HEART_ATRIUM_DN, GOBP_INSULIN_SECRETION, GOBP_CELLULAR_RESPONSE_TO_CARBOHYDRATE_STIMULUS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_UP, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_NEGATIVE_REGULATION_OF_PEPTIDE_SECRETION

GO Biological Process (21): ‘de novo’ protein folding (GO:0006458), smooth muscle contraction (GO:0006939), positive regulation of cytosolic calcium ion concentration (GO:0007204), negative regulation of heart rate (GO:0010459), regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (GO:0010880), regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (GO:0010881), neuronal action potential propagation (GO:0019227), calcium-mediated signaling (GO:0019722), insulin secretion involved in cellular response to glucose stimulus (GO:0035773), protein refolding (GO:0042026), T cell proliferation (GO:0042098), negative regulation of calcium-mediated signaling (GO:0050849), release of sequestered calcium ion into cytosol (GO:0051209), negative regulation of release of sequestered calcium ion into cytosol (GO:0051280), obsolete positive regulation of sequestering of calcium ion (GO:0051284), protein maturation (GO:0051604), response to redox state (GO:0051775), negative regulation of insulin secretion involved in cellular response to glucose stimulus (GO:0061179), regulation of heart rate (GO:0002027), response to glucose (GO:0009749), insulin secretion (GO:0030073)

GO Molecular Function (8): peptidyl-prolyl cis-trans isomerase activity (GO:0003755), signaling receptor binding (GO:0005102), calcium channel regulator activity (GO:0005246), FK506 binding (GO:0005528), calcium channel inhibitor activity (GO:0019855), transmembrane transporter binding (GO:0044325), protein binding (GO:0005515), isomerase activity (GO:0016853)

GO Cellular Component (6): cytoplasm (GO:0005737), membrane (GO:0016020), Z disc (GO:0030018), sarcoplasmic reticulum membrane (GO:0033017), calcium channel complex (GO:0034704), sarcoplasmic reticulum (GO:0016529)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Ion channel transport1
Cardiac conduction1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
protein folding2
regulation of biological quality2
regulation of release of sequestered calcium ion into cytosol2
protein binding2
calcium channel activity2
muscle contraction1
regulation of heart rate1
negative regulation of heart contraction1
release of sequestered calcium ion into cytosol by sarcoplasmic reticulum1
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum1
regulation of cardiac muscle contraction by calcium ion signaling1
transmission of nerve impulse1
nervous system process1
action potential propagation1
intracellular signaling cassette1
insulin secretion1
establishment of localization in cell1
cellular response to glucose stimulus1
T cell activation1
lymphocyte proliferation1
calcium-mediated signaling1
regulation of calcium-mediated signaling1
negative regulation of intracellular signal transduction1
intercellular transport1
calcium ion transmembrane import into cytosol1
release of sequestered calcium ion into cytosol1
negative regulation of calcium ion transmembrane transport1
gene expression1
protein metabolic process1
response to stimulus1
insulin secretion involved in cellular response to glucose stimulus1
negative regulation of insulin secretion1
negative regulation of response to stimulus1
regulation of insulin secretion involved in cellular response to glucose stimulus1
regulation of heart contraction1
response to hexose1
cis-trans isomerase activity1
catalytic activity, acting on a protein1
ion channel regulator activity1

Protein interactions and networks

STRING

2301 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
FKBP1BRYR2Q92736999
FKBP1BRYR1P21817981
FKBP1BTRDNQ13061963
FKBP1BCALML3P27482935
FKBP1BCALML5Q9NZT1935
FKBP1BCALML6Q8TD86930
FKBP1BCALML4Q96GE6930
FKBP1BAKAP6Q13023929
FKBP1BASPHQ12797907
FKBP1BCALM1P02593890
FKBP1BCASQ2O14958864
FKBP1BSH2D3AQ9BRG2857
FKBP1BPRKACAP17612846
FKBP1BPRKACBP22694846
FKBP1BPRKACGP22612846

IntAct

34 interactions, top by confidence:

ABTypeScore
FKBP1BRYR2psi-mi:“MI:2364”(proximity)0.720
RYR2FKBP1Bpsi-mi:“MI:0915”(physical association)0.720
FKBP1BRYR2psi-mi:“MI:0915”(physical association)0.720
RELFKBP1Bpsi-mi:“MI:0915”(physical association)0.560
CAMK2DFKBP1Bpsi-mi:“MI:0915”(physical association)0.560
FKBP1BKRT31psi-mi:“MI:0915”(physical association)0.560
FLJ13057FKBP1Bpsi-mi:“MI:0915”(physical association)0.560
KRT40FKBP1Bpsi-mi:“MI:0915”(physical association)0.560
FKBP1BADAMTSL4psi-mi:“MI:0915”(physical association)0.560
FKBP1BTRIM69psi-mi:“MI:0915”(physical association)0.560
FKBP1BRELpsi-mi:“MI:0915”(physical association)0.560
FKBP1BCAMK2Dpsi-mi:“MI:0915”(physical association)0.560
ADAMTSL4FKBP1Bpsi-mi:“MI:0915”(physical association)0.560
TRIM69FKBP1Bpsi-mi:“MI:0915”(physical association)0.560
FKBP1BFLJ13057psi-mi:“MI:0915”(physical association)0.560
FKBP1BRyR1psi-mi:“MI:0915”(physical association)0.400
RYR1FKBP1Bpsi-mi:“MI:0915”(physical association)0.400
FKBP1Bryr1psi-mi:“MI:0915”(physical association)0.400
FKBP1Bpsi-mi:“MI:0915”(physical association)0.400

BioGRID (38): FKBP1B (Two-hybrid), KRT31 (Two-hybrid), REL (Two-hybrid), ADAMTSL4 (Two-hybrid), GMCL1 (Two-hybrid), KRT40 (Two-hybrid), TRIM69 (Two-hybrid), DDAH2 (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation), FKBP1B (Co-fractionation)

ESM2 similar proteins: O04287, O42123, O42993, O94746, P0A0W2, P0A0W3, P0C1J3, P0CP94, P0CP95, P0CY37, P18203, P20080, P20081, P26883, P28725, P28870, P48375, P56989, P62942, P62943, P68106, P68107, P97534, Q13526, Q2U316, Q2UPT7, Q38931, Q43207, Q4HZB8, Q4R383, Q4W9R2, Q4WHX4, Q4WLV6, Q554J3, Q5ATN7, Q5BIN5, Q5VVH2, Q62658, Q6BX45, Q6CF41

Diamond homologs: A5IGB8, G0SC91, O04287, O08437, O42123, O42993, O46638, O94746, O95302, P0A0W2, P0A0W3, P0A9L3, P0A9L4, P0C1B0, P0C1J3, P0C1J5, P0C1J6, P0C1J7, P0CP94, P0CP95, P0CP96, P0CP97, P18203, P20081, P26623, P26884, P26885, P27124, P28870, P30416, P31106, P38911, P44760, P45523, P45878, P48375, P51752, P53605, P54397, P56989

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

123 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance98
Likely benign1
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

2737 predictions. Top by Δscore:

VariantEffectΔscore
2:24049883:GACG:Gdonor_gain1.0000
7:32974600:A:AGacceptor_gain1.0000
7:32974601:C:Gacceptor_gain1.0000
7:32974606:T:TAacceptor_gain1.0000
7:32974607:G:Aacceptor_gain1.0000
7:32974756:GGA:Gdonor_gain1.0000
7:32974757:GAG:Gdonor_gain1.0000
7:32974759:GTTT:Gdonor_gain1.0000
7:32974763:G:GGdonor_gain1.0000
7:32975177:TCTA:Tacceptor_loss1.0000
7:32975178:CTAG:Cacceptor_loss1.0000
7:32975179:TAG:Tacceptor_loss1.0000
7:32975180:A:AGacceptor_gain1.0000
7:32975180:AGC:Aacceptor_loss1.0000
7:32975180:AGCT:Aacceptor_gain1.0000
7:32975181:G:GGacceptor_gain1.0000
7:32975181:GCT:Gacceptor_gain1.0000
7:32975181:GCTG:Gacceptor_gain1.0000
7:32975227:T:TAacceptor_gain1.0000
7:32975369:GAG:Gdonor_gain1.0000
7:32975370:AG:Adonor_gain1.0000
7:32975371:GG:Gdonor_gain1.0000
7:32975372:G:GGdonor_gain1.0000
7:32975372:GTA:Gdonor_loss1.0000
7:32976342:A:AGacceptor_gain1.0000
7:32976345:A:AGacceptor_gain1.0000
7:32976346:C:Gacceptor_gain1.0000
7:32976348:TTTCA:Tacceptor_loss1.0000
7:32976349:TTCAG:Tacceptor_loss1.0000
7:32976350:TCAG:Tacceptor_loss1.0000

AlphaMissense

706 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
2:24060837:T:CF37L0.996
2:24060839:T:AF37L0.996
2:24060839:T:GF37L0.996
2:24060843:T:CS39P0.995
2:24060847:C:TS40F0.995
2:24063158:T:AL98H0.995
2:24063163:T:CF100L0.995
2:24063165:T:AF100L0.995
2:24063165:T:GF100L0.995
2:24060873:T:CF49L0.994
2:24060875:C:AF49L0.994
2:24060875:C:GF49L0.994
2:24063110:C:AA82E0.994
2:24063151:G:CA96P0.994
2:24063077:A:CQ71P0.993
2:24063094:T:CC77R0.993
2:24063164:T:CF100S0.993
2:24063082:G:CA73P0.992
2:24063125:G:AG87D0.991
2:24060814:G:AG29E0.990
2:24053943:T:CY27H0.989
2:24060838:T:CF37S0.989
2:24063158:T:CL98P0.989
2:24060907:T:CF60S0.988
2:24053914:C:AP17H0.987
2:24060841:A:TD38V0.987
2:24060847:C:AS40Y0.987
2:24060874:T:CF49S0.987
2:24060903:G:CG59R0.987
2:24060904:G:AG59D0.987

dbSNP variants (sampled 300 via entrez): RS1000029386 (2:24036180 T>C), RS1000083777 (2:24043561 T>C), RS1000175357 (2:24055174 A>G), RS1000280823 (2:24061258 A>C), RS1000485936 (2:24035968 C>T), RS1000567815 (2:24062474 C>T), RS1000632747 (2:24061520 G>A,T), RS1000674771 (2:24061779 T>A), RS1000837482 (2:24055797 A>C), RS1000974829 (2:24049931 G>A), RS1001100524 (2:24042754 C>G,T), RS1001177664 (2:24053482 A>G), RS1001182352 (2:24049215 G>T), RS1001250807 (2:24042205 C>G), RS1001289505 (2:24056038 G>A)

Disease associations

OMIM: gene MIM:600620 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

11 associations (top):

StudyTraitp-value
GCST000337_33Quantitative traits6.000000e-06
GCST003837_10Chronotype2.000000e-08
GCST005580_274Intraocular pressure6.000000e-10
GCST007576_425Chronotype2.000000e-12
GCST008163_57Height5.000000e-06
GCST009391_1574Metabolite levels9.000000e-06
GCST012489_159Heel bone mineral density x serum urate levels interaction4.000000e-08
GCST90002385_184High light scatter reticulocyte count3.000000e-12
GCST90002386_446High light scatter reticulocyte percentage of red cells1.000000e-14
GCST90002405_225Reticulocyte count1.000000e-20
GCST90002406_245Reticulocyte fraction of red cells4.000000e-18

EFO canonical traits (7, from GWAS)

EFO IDTrait name
EFO:0004458C-reactive protein measurement
EFO:0004695intraocular pressure measurement
EFO:0008328chronotype measurement
EFO:0010516orotic acid measurement
EFO:0004531urate measurement
EFO:0009270heel bone mineral density
EFO:0007986reticulocyte count

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (2): CHEMBL2430 (SINGLE PROTEIN), CHEMBL4296662 (PROTEIN COMPLEX)

Molecules with ChEMBL bioactivity

3 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 436,213 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL160CYCLOSPORINE4168,247
CHEMBL269732TACROLIMUS ANHYDROUS495,168
CHEMBL413SIROLIMUS4172,798

PharmGKB: 1 entry (VIP=true, CPIC=false)

ChEMBL bioactivities

49 potent at pChembl≥5 of 49 total, top 48 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.70Kd0.2nMSIROLIMUS
9.42Kd0.38nMCHEMBL5634031
9.40Kd0.4nMTACROLIMUS ANHYDROUS
9.22Kd0.6nMSIROLIMUS
8.91Ki1.23nMCHEMBL4090599
8.83Kd1.49nMTACROLIMUS ANHYDROUS
8.52Ki3nMCHEMBL216520
8.22Ki6nMCHEMBL2370706
8.22Ki6nMCYCLOSPORINE
8.22Ki6nMCHEMBL2370707
8.10IC508nMCHEMBL4079746
8.05Kd9nMCHEMBL4871144
7.72Kd19nMCHEMBL4878667
7.70Kd20nMCHEMBL4858532
7.50Kd32nMCHEMBL4863989
7.48Ki33nMCHEMBL2370711
7.42Kd38nMCHEMBL4878890
7.41Kd38.9nMCHEMBL3623630
7.37Kd43nMCHEMBL4876415
7.28Kd53nMCHEMBL4866742
7.21Kd62nMCHEMBL4872580
7.10IC5080nMCHEMBL3623630
7.09Kd82nMCHEMBL4859741
7.07Kd85nMCHEMBL4856956
7.03Kd94nMCHEMBL4879078
7.00Kd100nMCHEMBL4870008
6.98Kd105nMCHEMBL4862808
6.94Kd116nMCHEMBL4850434
6.94Kd115nMCHEMBL4862282
6.69Kd203nMCHEMBL4876664
6.67Kd216nMCHEMBL4868302
6.64Kd227nMCHEMBL4856457
6.64Kd227nMCHEMBL4850750
6.56Kd277nMCHEMBL4853042
6.52Kd301nMCHEMBL4856203
6.47Kd335nMCHEMBL4855135
6.46Kd344nMCHEMBL4860544
6.45Kd352nMCHEMBL4877731
6.42Kd383nMCHEMBL4863807
6.37Kd429nMCHEMBL4874574
6.35Kd446nMCHEMBL4848201
6.30Kd495nMCHEMBL4863883
6.22Kd606nMCHEMBL4875870
6.18Kd658nMCHEMBL4872122
6.15Kd715nMCHEMBL4866065
6.15Kd709nMCHEMBL4864747
6.07Kd849nMCHEMBL4863758
5.97Kd1075nMCHEMBL4867024

PubChem BioAssay actives

47 with measured affinity, of 59 total; 44 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
Sirolimus1179559: Binding affinity to FKBP12 (unknown origin) by NMR analysiskd0.0002uM
(1R,9S,12S,15S,16E,20E,23R,24S,27R)-1-hydroxy-15,23,27-trimethyl-12-[(2R)-1-[(1S,2S,3S,4R)-2,3,4-trihydroxycyclohexyl]propan-2-yl]-11,28-dioxa-4-azatricyclo[22.3.1.04,9]octacosa-16,20-diene-2,3,10,22-tetrone2139768: Binding affinity to human FKBP12.6 expressed in Escherichia coli BL21 DE3 Gold assessed as dissociation constant incubated for 30 mins by competitive fluorescence polarization assaykd0.0004uM
Tacrolimus1179559: Binding affinity to FKBP12 (unknown origin) by NMR analysiskd0.0004uM
(1S,5S,6R)-10-(3,5-dichlorophenyl)sulfonyl-5-(methoxymethyl)-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one1479800: Displacement of 5-(3-(4-(((5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-5-vinyl-3,10-diazabicyclo[4.3.1]decan-3-yl)methyl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3,10-dihydroanthracen-9-yl)benzoate from human FKBP12.6 after 30 mins by fluorescence polarization assayki0.0012uM
(3R,6S,8S,9R,14S,15S,17S,20R,27R,29S,30S,32S,33S)-21-ethyl-8,14,17,20,29,32-hexahydroxy-24-[(E)-1-hydroxy-2-methylhex-4-enyl]-1,3,6,10,16,19,25,28,31-nonamethyl-9,15,30,33-tetrakis(2-methylpropyl)-12,27-di(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecazacyclotritriacontane-2,5,11,23,26-pentone157232: The compound was tested for inhibition of Peptidyl-propyl isomerase (PPIase).ki0.0030uM
cyclosporine157232: The compound was tested for inhibition of Peptidyl-propyl isomerase (PPIase).ki0.0060uM
(3R,6S,9R,12S,15R,18R,21S,24S,30S,33S)-15-benzyl-30-ethyl-12-(hydroxymethyl)-33-[(E,1R)-1-hydroxy-2-methylhex-4-enyl]-1,4,7,10,19,25,28-heptamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-di(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone157232: The compound was tested for inhibition of Peptidyl-propyl isomerase (PPIase).ki0.0060uM
(3R,6S,9R,12R,15R,18R,21S,24S,27R,30S,33S)-15-benzyl-30-ethyl-33-[(E)-1-hydroxy-2-methylhex-4-enyl]-1,4,7,10,12,19,25,27,28-nonamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-di(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone157232: The compound was tested for inhibition of Peptidyl-propyl isomerase (PPIase).ki0.0060uM
2-[4-[9-(6-amino-3-pyridinyl)-2-oxopyrazino[2,3-c]quinolin-1-yl]piperidin-1-yl]acetonitrile1468099: Inhibition of full length recombinant human mTOR/FKBP12ic500.0080uM
(2S,9S,12R,20R,21R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-20,21-dihydroxy-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(28),13(29),14,16,24,26-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0090uM
(2S,9S,12R,20S,21S)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-20,21-dihydroxy-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(28),13(29),14,16,24,26-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0190uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,27-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.3.1.113,17.04,9]triaconta-1(29),13(30),14,16,25,27-hexaene-3,10,21-trione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0200uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(28),13(29),14,16,24,26-hexaene-3,10,20-trione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0320uM
(3R,6S,9R,12R,15R,18R,21S,24S,30S,33S)-15-benzyl-30-ethyl-33-[(E,1R)-1-hydroxy-2-methylhex-4-enyl]-1,4,7,10,12,19,25,28-octamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-di(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone157232: The compound was tested for inhibition of Peptidyl-propyl isomerase (PPIase).ki0.0330uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,28-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.2.2.113,17.04,9]nonacosa-1(26),13(29),14,16,24,27-hexaene-3,10,20-trione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0380uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,27-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.3.1.113,17.04,9]triaconta-1(29),13(30),14,16,25,27-hexaene-3,10,20-trione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0430uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,29-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.3.1.113,17.04,9]dotriaconta-1(31),13(32),14,16,27,29-hexaene-3,10,21-trione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0530uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(28),13(29),14,16,24,26-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0620uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-23,24-dimethoxy-11,18,21-trioxa-4-azatetracyclo[20.3.1.113,17.04,9]heptacosa-1(26),13(27),14,16,22,24-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0820uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-20,21-dihydroxy-25,28-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.2.2.113,17.04,9]nonacosa-1(26),13(29),14,16,24,27-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0850uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-24,25-dimethoxy-11,18,22-trioxa-4-azatetracyclo[21.3.1.113,17.04,9]octacosa-1(27),13(28),14,16,23,25-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.0940uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,27-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.3.1.113,17.04,9]triaconta-1(29),13(30),14,16,25,27-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.1000uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,29-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.3.1.113,17.04,9]dotriaconta-1(31),13(32),14,16,20,27,29-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.1050uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,29-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.3.1.113,17.04,9]dotriaconta-1(31),13(32),14,16,27,29-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.1150uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,27-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.3.1.113,17.04,9]triaconta-1(29),13(30),14,16,20,25,27-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.1160uM
[(1R)-3-(3,4-dimethoxyphenyl)-1-(3-methoxyphenyl)propyl] (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)acetyl]piperidine-2-carboxylate1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.2030uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(28),13(29),14,16,20,24,26-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.2160uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-23,26-dimethoxy-11,18,21-trioxa-4-azatetracyclo[20.2.2.113,17.04,9]heptacosa-1(24),13(27),14,16,22,25-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.2270uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-29,30-dimethoxy-11,18,23,27-tetraoxa-4-azatetracyclo[26.3.1.113,17.04,9]tritriaconta-1(32),13(33),14,16,28,30-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.2270uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-29,32-dimethoxy-11,18,23,27-tetraoxa-4-azatetracyclo[26.2.2.113,17.04,9]tritriaconta-1(30),13(33),14,16,28,31-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.2770uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,29-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.3.1.113,17.04,9]dotriaconta-1(31),13(32),14,16,20,27,29-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.3010uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-29,32-dimethoxy-11,18,23,27-tetraoxa-4-azatetracyclo[26.2.2.113,17.04,9]tritriaconta-1(30),13(33),14,16,20,28,31-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.3350uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,31-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.2.2.113,17.04,9]dotriaconta-1(29),13(32),14,16,20,27,30-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.3440uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-29,30-dimethoxy-11,18,23,27-tetraoxa-4-azatetracyclo[26.3.1.113,17.04,9]tritriaconta-1(32),13(33),14,16,20,28,30-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.3520uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,28-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.2.2.113,17.04,9]nonacosa-1(26),13(29),14,16,24,27-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.3830uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,31-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.2.2.113,17.04,9]dotriaconta-1(29),13(32),14,16,27,30-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.4290uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-24,27-dimethoxy-11,18,22-trioxa-4-azatetracyclo[21.2.2.113,17.04,9]octacosa-1(25),13(28),14,16,23,26-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.4460uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,29-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.2.2.113,17.04,9]triaconta-1(27),13(30),14,16,20,25,28-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.4950uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,28-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.2.2.113,17.04,9]nonacosa-1(26),13(29),14,16,20,24,27-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.6060uM
(2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,28-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.2.2.113,17.04,9]nonacosa-1(26),13(29),14,16,20,24,27-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.6580uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,27-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.3.1.113,17.04,9]triaconta-1(29),13(30),14,16,20,25,27-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.7090uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,31-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.2.2.113,17.04,9]dotriaconta-1(29),13(32),14,16,20,27,30-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.7150uM
(2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,29-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.2.2.113,17.04,9]triaconta-1(27),13(30),14,16,25,28-hexaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd0.8490uM
(2S,9S,12R,20E)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-26,29-dimethoxy-11,18,24-trioxa-4-azatetracyclo[23.2.2.113,17.04,9]triaconta-1(27),13(30),14,16,20,25,28-heptaene-3,10-dione1775635: Displacement of fluorescent tracer 5-(3-(4-((1S,5S,6S)-10-(3,5-dichlorophenylsulfonyl)-2-oxo-3-(pyridin-3-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-5-yl)-1H-1,2,3-triazol-1-yl)propylcarbamoyl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzoate from recombinant full length C-terminal FLAG-tagged FKBP12.6 (unknown origin) expressed in Escherichia coli BL21 (DE3) cells incubated for 30 mins by fluorescence polarisation competition assaykd1.0750uM

CTD chemical–gene interactions

42 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Air Pollutantsdecreases expression, increases abundance2
Phenylmercuric Acetateaffects cotreatment, decreases expression2
Valproic Acidincreases expression, affects expression2
Cyclosporinedecreases expression2
Particulate Matterdecreases expression, increases abundance2
bisphenol Faffects cotreatment, increases expression1
propionaldehydeincreases expression1
bisphenol Aincreases expression, affects cotreatment1
trichostatin Aaffects expression1
3,4-dichloroanilinedecreases expression1
sodium arseniteaffects cotreatment, decreases expression, increases abundance1
cobaltous chloridedecreases expression1
nickel sulfatedecreases expression1
seocalcitolincreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, decreases expression1
abrinedecreases expression1
dorsomorphinaffects cotreatment, decreases expression1
jinfukangdecreases expression, increases reaction1
Resveratrolaffects cotreatment, decreases expression1
Decitabineaffects expression1
Sunitinibdecreases expression1
Carvedilolaffects binding, increases reaction1
Arsenicaffects cotreatment, decreases expression, increases abundance1
Atenololaffects binding, increases reaction1
Benzo(a)pyreneincreases methylation1
Calcitriolincreases expression, affects cotreatment1
Cisplatindecreases expression, increases reaction1
Cyclophosphamideaffects response to substance1
Dexamethasoneaffects cotreatment, increases expression1
Diurondecreases expression1

ChEMBL screening assays

26 unique, capped per target: 26 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL3369573BindingBinding affinity to FKBP12 (unknown origin) by NMR analysisElements and modulation of functional dynamics. — J Med Chem

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.