FLVCR1
geneOn this page
Also known as FLVCRMFSD7BPCASLC49A1
Summary
FLVCR1 (FLVCR choline and heme transporter 1, HGNC:24682) is a protein-coding gene on chromosome 1q32.3, encoding Choline/ethanolamine transporter FLVCR1 (Q9Y5Y0). Uniporter that mediates the transport of extracellular choline and ethanolamine into cells, thereby playing a key role in phospholipid biosynthesis.
This gene encodes a member of the major facilitator superfamily of transporter proteins. The encoded protein is a heme transporter that may play a critical role in erythropoiesis by protecting developing erythroid cells from heme toxicity. This gene may play a role in posterior column ataxia with retinitis pigmentosa and the hematological disorder Diamond-Blackfan syndrome.
Source: NCBI Gene 28982 — RefSeq curated summary.
At a glance
- Gene–disease (curated): FLVCR1-related retinopathy with or without ataxia (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 6
- Clinical variants (ClinVar): 609 total — 34 pathogenic, 17 likely-pathogenic
- Phenotypes (HPO): 113
- MANE Select transcript:
NM_014053
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24682 |
| Approved symbol | FLVCR1 |
| Name | FLVCR choline and heme transporter 1 |
| Location | 1q32.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLVCR, MFSD7B, PCA, SLC49A1 |
| Ensembl gene | ENSG00000162769 |
| Ensembl biotype | protein_coding |
| OMIM | 609144 |
| Entrez | 28982 |
Gene structure
Transcript identifiers
Ensembl transcripts: 9 — 6 protein_coding, 3 protein_coding_CDS_not_defined
ENST00000366971, ENST00000419102, ENST00000474693, ENST00000483790, ENST00000579295, ENST00000867613, ENST00000930967, ENST00000930968, ENST00000971333
RefSeq mRNA: 1 — MANE Select: NM_014053
NM_014053
CCDS: CCDS1510
Canonical transcript exons
ENST00000366971 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001068430 | 212887891 | 212888001 |
| ENSE00001068434 | 212863725 | 212863869 |
| ENSE00001443144 | 212858275 | 212859190 |
| ENSE00001629822 | 212895216 | 212899363 |
| ENSE00003529134 | 212872678 | 212872818 |
| ENSE00003543077 | 212888489 | 212888594 |
| ENSE00003559288 | 212885293 | 212885396 |
| ENSE00003583473 | 212889146 | 212889257 |
| ENSE00003596929 | 212894986 | 212895053 |
| ENSE00003605605 | 212883371 | 212883438 |
Expression profiles
Bgee: expression breadth ubiquitous, 240 present calls, max score 98.88.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 8.7436 / max 327.2458, expressed in 1621 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 8491 | 6.7673 | 1516 |
| 8492 | 0.9927 | 530 |
| 8490 | 0.9836 | 569 |
Top tissues by expression
252 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| jejunal mucosa | UBERON:0000399 | 98.88 | gold quality |
| ileal mucosa | UBERON:0000331 | 98.39 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 95.34 | gold quality |
| corpus epididymis | UBERON:0004359 | 93.28 | gold quality |
| adrenal tissue | UBERON:0018303 | 90.60 | gold quality |
| bronchial epithelial cell | CL:0002328 | 90.46 | gold quality |
| buccal mucosa cell | CL:0002336 | 89.88 | gold quality |
| duodenum | UBERON:0002114 | 89.80 | gold quality |
| bronchus | UBERON:0002185 | 89.52 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 88.24 | gold quality |
| oviduct epithelium | UBERON:0004804 | 87.84 | gold quality |
| pylorus | UBERON:0001166 | 87.21 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 86.90 | gold quality |
| tibia | UBERON:0000979 | 86.87 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 86.77 | gold quality |
| pancreatic ductal cell | CL:0002079 | 86.74 | gold quality |
| colonic mucosa | UBERON:0000317 | 86.53 | gold quality |
| caput epididymis | UBERON:0004358 | 86.21 | gold quality |
| seminal vesicle | UBERON:0000998 | 86.15 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 86.10 | gold quality |
| calcaneal tendon | UBERON:0003701 | 85.74 | gold quality |
| ventricular zone | UBERON:0003053 | 85.36 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 85.27 | gold quality |
| visceral pleura | UBERON:0002401 | 84.78 | gold quality |
| islet of Langerhans | UBERON:0000006 | 84.54 | gold quality |
| cerebellar vermis | UBERON:0004720 | 84.51 | gold quality |
| jejunum | UBERON:0002115 | 84.29 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 83.57 | gold quality |
| sural nerve | UBERON:0015488 | 83.27 | gold quality |
| bone marrow cell | CL:0002092 | 83.05 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.54 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): EPAS1, ETS1
miRNA regulators (miRDB)
123 targeting FLVCR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-6768-5P | 99.92 | 67.36 | 1942 |
| HSA-MIR-338-5P | 99.92 | 72.34 | 2951 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-10527-5P | 99.91 | 72.28 | 3754 |
Literature-anchored findings (GeneRIF, showing 29)
- the FLVCR gene on 1q31 is not involved in Diamond-Blackfan anemia in families studied (PMID:15996880)
- results suggest that multiple FLVCR1 regions are critical for mediating efficient feline leukemia virus subgroup C (FeLV-C) infection and that these regions are distinct from the FeLV-C envelope binding site (PMID:16439531)
- Alternative splicing of FLVCR1 transcripts and subsequent FLVCR1 insufficiency is an additional contributing factor to the erythropoietic defect observed in Diamond-Blackfan anemia. (PMID:18815190)
- hemopexin directly interacts with FLVCR (PMID:20610401)
- These results suggest that aberrant FLVCR1 causes a selective degeneration of a subpopulation of neurons in the retina and the posterior columns of the spinal cord via dysregulation of heme or iron homeostasis. (PMID:21070897)
- Posterior column ataxia with retinitis pigmentosa is caused by mutations in FLVCR1. (PMID:21267618)
- relative protein expression of 2 heme transporters, Feline Leukemia Virus, Subgroup C, Receptor 1 (FLVCR1) and Breast Cancer Resistance Protein, was assessed in placental tissue in relation to maternal/neonatal iron status and placental iron concentration (PMID:21593354)
- Study identified sequence variants in the known disease-causing genes SLC6A3 and FLVCR1, and present evidence to strongly support the pathogenicity of variants identified in TUBGCP6, BRAT1, SNIP1, CRADD, and HARS. (PMID:22279524)
- FLVCR1 mutants failed to fold properly in the ER, were rapidly degraded in the lysosomes, and therefore, could not export heme out of cells. Thus, accumulation of heme in FLVCR1-mutant cells could cause cellular toxicity. (PMID:22483575)
- FLVCR1b regulates erythropoiesis by controlling mitochondrial heme efflux, whereas FLVCR1a expression is required to prevent hemorrhages and edema. (PMID:23187127)
- both HIF2alpha and ETS1 are involved in the transcriptional regulation of Flvcr1a and that HIF2alpha is absolutely required for Flvcr1a induction upon hypoxia (PMID:24576667)
- Flvcr1 regulates differentiation of erythroid progenitors by controlling intracellular heme accumulation. (PMID:25795718)
- RPS19-downregulated erythroleukemia cells show reduced FLVCR1a and FLVCR1b mRNA levels associated with heme overload. (PMID:26058344)
- Data shows that FLVCR1a participates in the control of intestinal mucosa homeostasis by exporting the excess of de novo synthesized heme from intestinal cells. (PMID:26067085)
- Using fibroblasts and lymphoblastoid cell lines from patients with sensory neurodegeneration, we here show that the FLVCR1-mutations reduce heme export activity, enhance oxidative stress and increase sensitivity to programmed cell death. Our data link heme metabolism to sensory neuron maintenance and suggest that intracellular heme overload causes early-onset degeneration of pain-sensing neurons in humans (PMID:27923065)
- Altogether, these findings showed a direct association between FLVCR1 mRNA levels and hyperglycemia, suggesting that increased adipose tissue heme exportation might disrupt, or is the consequence of, impaired systemic glucose metabolism during the progression to type 2 diabetes. (PMID:28706239)
- Mutation in FLVCR1 gene is associated with Posterior column ataxia with retinitis pigmentosa coexisting with sensory-autonomic neuropathy and leukemia. (PMID:28766925)
- Here, we describe a patient with non-syndromic retinitis pigmentosa homozygous for a splice-site variant in FLVCR1 (c.1092 + 5G>A) without evidence of posterior column ataxia or cerebellar degeneration. (PMID:29192808)
- findings suggested that FLVCR1-AS1/miR-573/E2F3 axis was an important signaling pathway in mediating tumorigenesis and progression of NSCLC (PMID:30309647)
- We describe clinical and retinal imaging features in the one of the largest cohorts of affected patients in the literature. Given the availability of genetic testing for this phenotype, testing for FLVCR1 mutations should be considered in pediatric and adult patients with sensory ataxia and retinitis pigmentosa. (PMID:30444160)
- Mutations in FLVCR1 can present with the clinical picture of a non-syndromic autosomal recessive RP (in this case RP without PCA), RP with mild cerebellar signs, but also PCARP. (PMID:30656474)
- FLVCR1 p.Tyr341Cys mutation was observed homozygously in seven Retinitis Pigmentosa affected Irish patients across four pedigrees. (PMID:31884612)
- Isolated juvenile macular dystrophy without posterior column ataxia associated with FLVCR1 mutation. (PMID:34433355)
- Extending the phenotype of posterior column ataxia with retinitis pigmentosa caused by variants in FLVCR1. (PMID:34931442)
- Mfsd7b facilitates choline transport and missense mutations affect choline transport function. (PMID:38055060)
- Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. (PMID:38693265)
- Molecular mechanism of choline and ethanolamine transport in humans. (PMID:38778100)
- Dysregulation of FLVCR1a-dependent mitochondrial calcium handling in neural progenitors causes congenital hydrocephalus. (PMID:39019006)
- Apoptotic metabolites ameliorate bone aging phenotypes via TCOF1/FLVCR1-mediated mitochondrial homeostasis. (PMID:39237990)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | flvcr1 | ENSDARG00000031587 |
| mus_musculus | Flvcr1 | ENSMUSG00000066595 |
| rattus_norvegicus | Flvcr1 | ENSRNOG00000049633 |
| drosophila_melanogaster | HisT | FBGN0033196 |
| caenorhabditis_elegans | C09D4.1 | WBGENE00015632 |
Paralogs (4): FLVCR2 (ENSG00000119686), SLC49A4 (ENSG00000138463), SLC49A3 (ENSG00000169026), CFAP276 (ENSG00000179902)
Protein
Protein identifiers
Choline/ethanolamine transporter FLVCR1 — Q9Y5Y0 (reviewed: Q9Y5Y0)
Alternative names: Feline leukemia virus subgroup C receptor-related protein 1, Heme transporter FLVCR1
All UniProt accessions (2): Q9Y5Y0, H7C3Z2
UniProt curated annotations — full annotation on UniProt →
Function. Uniporter that mediates the transport of extracellular choline and ethanolamine into cells, thereby playing a key role in phospholipid biosynthesis. Choline and ethanolamine are the precursors of phosphatidylcholine and phosphatidylethanolamine, respectively, the two most abundant phospholipids. Transport is not coupled with proton transport and is exclusively driven by the choline (or ethanolamine) gradient across the plasma membrane. Also acts as a heme b transporter that mediates heme efflux from the cytoplasm to the extracellular compartment. Uniporter that mediates the transport of extracellular choline and ethanolamine into cells. Choline and ethanolamine are the precursors of phosphatidylcholine and phosphatidylethanolamine, respectively, the two most abundant phospholipids. Transport is not coupled with proton transport and is exclusively driven by the choline (or ethanolamine) gradient across the plasma membrane. Also acts as a heme b transporter that mediates heme efflux from the cytoplasm to the extracellular compartment. Heme export depends on the presence of HPX and is required to maintain intracellular free heme balance, protecting cells from heme toxicity. Heme export provides protection from heme or ferrous iron toxicities in liver, brain, sensory neurons and during erythropoiesis, a process in which heme synthesis intensifies. Possibly export coproporphyrin and protoporphyrin IX, which are both intermediate products in the heme biosynthetic pathway. Does not export bilirubin. The molecular mechanism of heme transport, whether electrogenic, electroneutral or coupled to other ions, remains to be elucidated. Heme b transporter that promotes heme efflux from the mitochondrion to the cytoplasm. Essential for erythroid differentiation. (Microbial infection) Confers susceptibility to feline leukemia virus subgroup C (FeLV-C) infection in vitro.
Subcellular location. Cell membrane Mitochondrion membrane.
Tissue specificity. Found all hematopoietic tissues including peripheral blood lymphocytes. Some expression is found in pancreas and kidney.
Post-translational modifications. N-Glycosylated.
Disease relevance. Retinopathy-sensory neuropathy syndrome (RETSNS) [MIM:609033] An autosomal recessive neurodegenerative syndrome beginning in infancy with areflexia and retinitis pigmentosa. Nyctalopia (night blindness) and peripheral visual field loss are usually evident during late childhood or teenage years, with subsequent progressive constriction of the visual fields and loss of central retinal function over time. A sensory ataxia caused by degeneration of the posterior columns of the spinal cord results in a loss of proprioceptive sensation that is clinically evident in the second decade of life and gradually progresses. Scoliosis, camptodactyly, achalasia, gastrointestinal dysmotility, and a sensory peripheral neuropathy are variable features of the disease. Affected individuals have no clinical or radiological evidence of cerebral or cerebellar involvement. Some patients have pain insensitivity and commonly manifest self-injury, ulcers and amputations. The disease is caused by variants affecting the gene represented in this entry. Defective neuronal heme transmembrane export due to FLVCR1 mutations may abrogate the neuroprotective effects of neuroglobin and initiate an apoptotic cascade that results in the selective degeneration of photoreceptors in the neurosensory retina and sensory neurons in the posterior spinal cord. Neurodevelopmental disorder with microcephaly, absent speech, and hypotonia (NEDMISH) [MIM:621060] A severe, autosomal recessive disorder characterized by profound global developmental delay, impaired intellectual development, absent speech, microcephaly, brain malformations, epilepsy, spasticity, and premature death. Brain malformations range from mild brain volume reduction to hydranencephaly. Additional features may include cortical visual impairment, sensory neuropathy, limb and digital malformations, and macrocytic anemia. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. Has a probable mitochondrial transit peptide at positions 1-38.
Similarity. Belongs to the major facilitator superfamily. Feline leukemia virus subgroup C receptor (TC 2.A.1.28.1) family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9Y5Y0-1 | 1, FLVCR1a | yes |
| Q9Y5Y0-2 | 2, FLVCR1b, mitochondrial |
RefSeq proteins (1): NP_054772* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR011701 | MFS | Family |
| IPR020846 | MFS_dom | Domain |
| IPR036259 | MFS_trans_sf | Homologous_superfamily |
| IPR049680 | FLVCR1-2_SLC49-like | Family |
Pfam: PF07690
Catalyzed reactions (Rhea), 3 shown:
- ethanolamine(in) = ethanolamine(out) (RHEA:32747)
- choline(out) = choline(in) (RHEA:32751)
- heme b(in) = heme b(out) (RHEA:75443)
UniProt features (86 total): sequence variant 22, helix 18, topological domain 13, transmembrane region 12, mutagenesis site 8, binding site 3, region of interest 2, modified residue 2, turn 2, chain 1, glycosylation site 1, splice variant 1, strand 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8UC0 | ELECTRON MICROSCOPY | 2.42 |
| 8UBX | ELECTRON MICROSCOPY | 2.5 |
| 8UBW | ELECTRON MICROSCOPY | 2.59 |
| 8QCT | ELECTRON MICROSCOPY | 2.6 |
| 8UBY | ELECTRON MICROSCOPY | 2.67 |
| 8QCS | ELECTRON MICROSCOPY | 2.9 |
| 8R8T | ELECTRON MICROSCOPY | 2.9 |
| 8UBZ | ELECTRON MICROSCOPY | 3.02 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9Y5Y0-F1 | 78.49 | 0.54 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (3): 214; 471; 471
Post-translational modifications (2): 56, 536
Glycosylation sites (1): 265
Mutagenesis-validated functional residues (8):
| Position | Phenotype |
|---|---|
| 125 | reduced transport of choline and ethanolamine. |
| 151 | no effect on choline transmembrane transporter activity. no effect on ethanolamine transmembrane transporter activity. |
| 153 | reduced transport of choline and ethanolamine. |
| 214 | reduced transport of choline and nearly abolished transport of ethanolamine. |
| 245 | slightly reduced transport of choline and ethanolamine. |
| 349 | reduced transport of choline and ethanolamine. |
| 443 | decreased choline and ethanolamine transmembrane transporter activity. |
| 471 | slightly reduced transport of choline and ethanolamine. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-189451 | Heme biosynthesis |
| R-HSA-917937 | Iron uptake and transport |
MSigDB gene sets: 307 (showing top):
GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_EMBRYO_DEVELOPMENT_ENDING_IN_BIRTH_OR_EGG_HATCHING, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_BODY_MORPHOGENESIS, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_SKELETAL_SYSTEM_DEVELOPMENT, GOBP_MYELOID_CELL_DEVELOPMENT, GOBP_IRON_COORDINATION_ENTITY_TRANSPORT, GOBP_EMBRYONIC_DIGIT_MORPHOGENESIS, GOBP_REGULATION_OF_DEVELOPMENTAL_GROWTH, GOBP_TRANSITION_METAL_ION_TRANSPORT, GOBP_EMBRYONIC_SKELETAL_SYSTEM_DEVELOPMENT, REACTOME_METABOLISM_OF_PORPHYRINS, GOBP_EMBRYONIC_SKELETAL_SYSTEM_MORPHOGENESIS, GOBP_ERYTHROCYTE_HOMEOSTASIS
GO Biological Process (20): blood vessel development (GO:0001568), in utero embryonic development (GO:0001701), heme biosynthetic process (GO:0006783), mitochondrial transport (GO:0006839), intracellular iron ion homeostasis (GO:0006879), phospholipid biosynthetic process (GO:0008654), choline transport (GO:0015871), heme transport (GO:0015886), erythrocyte differentiation (GO:0030218), multicellular organism growth (GO:0035264), embryonic digit morphogenesis (GO:0042733), erythrocyte maturation (GO:0043249), regulation of organ growth (GO:0046620), spleen development (GO:0048536), embryonic skeletal system morphogenesis (GO:0048704), head morphogenesis (GO:0060323), heme export (GO:0097037), ethanolamine transport (GO:0034229), limb morphogenesis (GO:0035108), transmembrane transport (GO:0055085)
GO Molecular Function (6): choline transmembrane transporter activity (GO:0015220), heme transmembrane transporter activity (GO:0015232), heme binding (GO:0020037), ethanolamine transmembrane transporter activity (GO:0034228), protein binding (GO:0005515), transmembrane transporter activity (GO:0022857)
GO Cellular Component (5): mitochondrion (GO:0005739), mitochondrial inner membrane (GO:0005743), plasma membrane (GO:0005886), membrane (GO:0016020), mitochondrial membrane (GO:0031966)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Metabolism of porphyrins | 1 |
| Transport of small molecules | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| nitrogen compound transport | 2 |
| heme transport | 2 |
| transmembrane transporter activity | 2 |
| vasculature development | 1 |
| anatomical structure development | 1 |
| chordate embryonic development | 1 |
| porphyrin-containing compound biosynthetic process | 1 |
| heme metabolic process | 1 |
| pigment biosynthetic process | 1 |
| intracellular transport | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| inorganic ion homeostasis | 1 |
| phospholipid metabolic process | 1 |
| lipid biosynthetic process | 1 |
| organophosphate biosynthetic process | 1 |
| iron coordination entity transport | 1 |
| myeloid cell differentiation | 1 |
| erythrocyte homeostasis | 1 |
| multicellular organismal process | 1 |
| developmental growth | 1 |
| embryonic limb morphogenesis | 1 |
| embryonic morphogenesis | 1 |
| cell maturation | 1 |
| erythrocyte development | 1 |
| organ growth | 1 |
| regulation of developmental growth | 1 |
| regulation of multicellular organismal process | 1 |
| hematopoietic or lymphoid organ development | 1 |
| embryonic organ morphogenesis | 1 |
| skeletal system morphogenesis | 1 |
| embryonic skeletal system development | 1 |
| anatomical structure morphogenesis | 1 |
| body morphogenesis | 1 |
| head development | 1 |
| amine transport | 1 |
| organic hydroxy compound transport | 1 |
| appendage morphogenesis | 1 |
| limb development | 1 |
| transport | 1 |
| cellular process | 1 |
Protein interactions and networks
STRING
958 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FLVCR1 | HPX | P02790 | 827 |
| FLVCR1 | SLC48A1 | Q6P1K1 | 724 |
| FLVCR1 | SLC46A1 | Q96NT5 | 717 |
| FLVCR1 | ABCB10 | Q9NRK6 | 649 |
| FLVCR1 | STEAP3 | Q658P3 | 617 |
| FLVCR1 | FECH | P22830 | 615 |
| FLVCR1 | ABCB6 | Q9NP58 | 609 |
| FLVCR1 | ALAS1 | P13196 | 600 |
| FLVCR1 | CPOX | P36551 | 578 |
| FLVCR1 | SLC25A37 | Q9NYZ2 | 578 |
| FLVCR1 | SLC40A1 | Q9NP59 | 571 |
| FLVCR1 | PPOX | P50336 | 543 |
| FLVCR1 | SLC11A2 | P49281 | 541 |
| FLVCR1 | ABCB7 | O75027 | 529 |
| FLVCR1 | CYBRD1 | Q53TN4 | 527 |
IntAct
200 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| IL2RG | REEP6 | psi-mi:“MI:0914”(association) | 0.710 |
| TMEM9B | DNAJC13 | psi-mi:“MI:0914”(association) | 0.640 |
| SLC20A1 | LIN7A | psi-mi:“MI:0914”(association) | 0.640 |
| CD27 | TCAF2 | psi-mi:“MI:0914”(association) | 0.640 |
| FAM234B | ABCD4 | psi-mi:“MI:0914”(association) | 0.620 |
| SLC7A1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.530 |
| XKRX | FAM234B | psi-mi:“MI:0914”(association) | 0.530 |
| ADGRG5 | KLRG2 | psi-mi:“MI:0914”(association) | 0.530 |
| GYPB | TCAF2 | psi-mi:“MI:0914”(association) | 0.530 |
| TEX29 | TOR1A | psi-mi:“MI:0914”(association) | 0.530 |
| NT5E | SCAMP1 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC15A4 | PGRMC1 | psi-mi:“MI:0914”(association) | 0.530 |
| TMEM9 | ESYT2 | psi-mi:“MI:0914”(association) | 0.530 |
| VAMP5 | NBAS | psi-mi:“MI:0914”(association) | 0.530 |
| SLC22A9 | GPR89A | psi-mi:“MI:0914”(association) | 0.530 |
| PTGIR | TMEM63A | psi-mi:“MI:0914”(association) | 0.530 |
| SLC22A16 | APBA3 | psi-mi:“MI:0914”(association) | 0.530 |
| OPALIN | BTAF1 | psi-mi:“MI:0914”(association) | 0.530 |
| ANKH | FAM234B | psi-mi:“MI:0914”(association) | 0.530 |
| FLVCR1 | TNFRSF10B | psi-mi:“MI:0914”(association) | 0.530 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
BioGRID (190): FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Proximity Label-MS), FLVCR1 (Proximity Label-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS), FLVCR1 (Affinity Capture-MS)
ESM2 similar proteins: A0A0R4ILB2, A0A8M9Q308, A1A4N1, A2CER7, A5D7V7, A8WGF7, B0S5Y3, B2RXV4, B5X4H8, O00400, O00476, O01735, O23596, P30638, P36836, P46029, P60815, Q11073, Q16348, Q28722, Q28FF3, Q503P5, Q5F4B8, Q5RBM3, Q5XGK0, Q63424, Q6AYY8, Q6DDL7, Q6DIT7, Q6GMG6, Q6PB15, Q7Z3Q1, Q84XI3, Q86WB7, Q91X85, Q944P0, Q99808, Q99J27, Q9BZD2, Q9C8X2
Diamond homologs: A0A0R4ILB2, A0A8M9Q308, B2RXV4, O01735, P60815, Q91X85, Q9ES43, Q9N1F2, Q9UPI3, Q9Y5Y0, Q28FF3, Q501I9, Q66H95, Q6GNV7, Q8BFQ6, Q96SL1, Q11073, Q503P5, Q6UXD7, Q8CE47
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 175 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Ras activation upon Ca2+ influx through NMDA receptor | 8 | 41.1× | 2e-09 |
| Unblocking of NMDA receptors, glutamate binding and activation | 5 | 24.5× | 9e-05 |
| Negative regulation of NMDA receptor-mediated neuronal transmission | 5 | 24.5× | 9e-05 |
| Assembly and cell surface presentation of NMDA receptors | 10 | 22.9× | 2e-09 |
| Dopamine Neurotransmitter Release Cycle | 5 | 22.4× | 1e-04 |
| Long-term potentiation | 5 | 21.4× | 1e-04 |
| Neurotransmitter release cycle | 5 | 19.8× | 2e-04 |
| Neurexins and neuroligins | 11 | 19.5× | 2e-09 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| establishment or maintenance of epithelial cell apical/basal polarity | 10 | 36.3× | 8e-11 |
| protein localization to synapse | 6 | 28.7× | 9e-06 |
| receptor clustering | 7 | 27.3× | 2e-06 |
| regulation of postsynaptic membrane neurotransmitter receptor levels | 7 | 21.7× | 9e-06 |
| cell-cell adhesion | 11 | 7.0× | 8e-05 |
| exocytosis | 7 | 6.6× | 6e-03 |
| protein-containing complex assembly | 9 | 6.4× | 1e-03 |
| protein transport | 16 | 4.4× | 1e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
609 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 34 |
| Likely pathogenic | 17 |
| Uncertain significance | 306 |
| Likely benign | 155 |
| Benign | 48 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1069108 | NM_014053.4(FLVCR1):c.1291dup (p.Thr431fs) | Pathogenic |
| 1069681 | NC_000001.10:g.(?213058615)(213058758_?)del | Pathogenic |
| 1071648 | NM_014053.4(FLVCR1):c.1488dup (p.Leu497fs) | Pathogenic |
| 1377362 | NM_014053.4(FLVCR1):c.28del (p.Ala10fs) | Pathogenic |
| 1415512 | NM_014053.4(FLVCR1):c.561_656del (p.Ala188_Gly219del) | Pathogenic |
| 1451205 | NM_014053.4(FLVCR1):c.835del (p.Tyr279fs) | Pathogenic |
| 1456300 | NM_014053.4(FLVCR1):c.126del (p.Ala44fs) | Pathogenic |
| 1456369 | NC_000001.10:g.(?213061213)(213062619_?)del | Pathogenic |
| 1457358 | NM_014053.4(FLVCR1):c.947del (p.Pro316fs) | Pathogenic |
| 18418 | NM_014053.4(FLVCR1):c.361A>G (p.Asn121Asp) | Pathogenic |
| 18419 | NM_014053.4(FLVCR1):c.721G>A (p.Ala241Thr) | Pathogenic |
| 1962180 | NM_014053.4(FLVCR1):c.154del (p.Ala52fs) | Pathogenic |
| 2007153 | NM_014053.4(FLVCR1):c.238del (p.Arg80fs) | Pathogenic |
| 2425886 | NC_000001.10:g.(?213046000)(213046180_?)del | Pathogenic |
| 2425887 | NC_000001.10:g.(?213031795)(213037231_?)del | Pathogenic |
| 2770146 | NM_014053.4(FLVCR1):c.1194C>A (p.Tyr398Ter) | Pathogenic |
| 3010005 | NM_014053.4(FLVCR1):c.1427del (p.Leu476fs) | Pathogenic |
| 30775 | NM_014053.4(FLVCR1):c.1477G>C (p.Gly493Arg) | Pathogenic |
| 3377003 | NM_014053.4(FLVCR1):c.441_445del (p.Trp148fs) | Pathogenic |
| 3383430 | NM_014053.4(FLVCR1):c.1193dup (p.Tyr398Ter) | Pathogenic |
| 3600271 | NM_014053.4(FLVCR1):c.610del (p.Met204fs) | Pathogenic |
| 3600274 | NM_014053.4(FLVCR1):c.1390G>A (p.Gly464Ser) | Pathogenic |
| 3600275 | NM_014053.4(FLVCR1):c.1328T>G (p.Leu443Arg) | Pathogenic |
| 3600279 | NM_014053.4(FLVCR1):c.382T>A (p.Tyr128Asn) | Pathogenic |
| 3721315 | NM_014053.4(FLVCR1):c.160dup (p.Arg54fs) | Pathogenic |
| 3725377 | NM_014053.4(FLVCR1):c.440_447del (p.Asp147fs) | Pathogenic |
| 379610 | NM_014053.4(FLVCR1):c.1093-1G>A | Pathogenic |
| 4074396 | NM_014053.4(FLVCR1):c.899dup (p.Arg301fs) | Pathogenic |
| 450232 | NM_014053.4(FLVCR1):c.1377dup (p.Gly460fs) | Pathogenic |
| 4730270 | NM_014053.4(FLVCR1):c.370C>T (p.Gln124Ter) | Pathogenic |
SpliceAI
2129 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:212872668:A:AG | acceptor_gain | 1.0000 |
| 1:212872669:T:G | acceptor_gain | 1.0000 |
| 1:212872670:A:AG | acceptor_gain | 1.0000 |
| 1:212872671:T:G | acceptor_gain | 1.0000 |
| 1:212872675:CA:C | acceptor_loss | 1.0000 |
| 1:212872676:A:AG | acceptor_gain | 1.0000 |
| 1:212872677:G:GT | acceptor_gain | 1.0000 |
| 1:212872677:GC:G | acceptor_gain | 1.0000 |
| 1:212872677:GCC:G | acceptor_gain | 1.0000 |
| 1:212872815:TATGG:T | donor_loss | 1.0000 |
| 1:212872816:ATGGT:A | donor_loss | 1.0000 |
| 1:212872817:TGGTA:T | donor_loss | 1.0000 |
| 1:212872819:G:GG | donor_gain | 1.0000 |
| 1:212872819:GT:G | donor_loss | 1.0000 |
| 1:212872820:T:G | donor_loss | 1.0000 |
| 1:212885397:G:GG | donor_gain | 1.0000 |
| 1:212887751:T:A | acceptor_gain | 1.0000 |
| 1:212895051:GCT:G | donor_gain | 1.0000 |
| 1:212895054:G:GG | donor_gain | 1.0000 |
| 1:212895350:GAGAT:G | donor_gain | 1.0000 |
| 1:212895352:GAT:G | donor_gain | 1.0000 |
| 1:212863723:A:AG | acceptor_gain | 0.9900 |
| 1:212863723:AGCTT:A | acceptor_gain | 0.9900 |
| 1:212863724:G:GG | acceptor_gain | 0.9900 |
| 1:212863724:GCTTG:G | acceptor_gain | 0.9900 |
| 1:212864516:G:GT | donor_gain | 0.9900 |
| 1:212864517:A:T | donor_gain | 0.9900 |
| 1:212870169:G:GG | donor_gain | 0.9900 |
| 1:212872663:C:CA | acceptor_gain | 0.9900 |
| 1:212872665:T:TA | acceptor_gain | 0.9900 |
AlphaMissense
3551 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:212859137:T:C | F229L | 0.999 |
| 1:212859139:T:A | F229L | 0.999 |
| 1:212859139:T:G | F229L | 0.999 |
| 1:212863735:C:A | A250E | 0.999 |
| 1:212858825:T:A | W125R | 0.998 |
| 1:212858825:T:C | W125R | 0.998 |
| 1:212859126:C:A | A225D | 0.998 |
| 1:212859134:T:A | W228R | 0.998 |
| 1:212859134:T:C | W228R | 0.998 |
| 1:212859168:C:A | A239D | 0.998 |
| 1:212863729:G:A | G248E | 0.998 |
| 1:212863740:G:C | G252R | 0.998 |
| 1:212863741:G:A | G252D | 0.998 |
| 1:212883383:G:A | G346D | 0.998 |
| 1:212885350:G:C | G384R | 0.998 |
| 1:212885351:G:A | G384D | 0.998 |
| 1:212889153:G:A | G474E | 0.998 |
| 1:212859162:C:A | A237D | 0.997 |
| 1:212863728:G:A | G248R | 0.997 |
| 1:212863728:G:C | G248R | 0.997 |
| 1:212863743:T:C | F253L | 0.997 |
| 1:212863745:T:A | F253L | 0.997 |
| 1:212863745:T:G | F253L | 0.997 |
| 1:212883371:G:A | G342D | 0.997 |
| 1:212883382:G:C | G346R | 0.997 |
| 1:212885341:G:A | G381R | 0.997 |
| 1:212885341:G:C | G381R | 0.997 |
| 1:212885375:T:C | L392P | 0.997 |
| 1:212888578:T:C | L466P | 0.997 |
| 1:212889152:G:A | G474R | 0.997 |
dbSNP variants (sampled 300 via entrez): RS1000082915 (1:212884406 A>G), RS1000330964 (1:212866110 A>G), RS1000485115 (1:212873036 A>G), RS1000543404 (1:212873200 C>T), RS1000663131 (1:212867572 G>A), RS1000726024 (1:212859490 G>A), RS1000814885 (1:212873326 GAAAGA>G), RS1000865057 (1:212884971 A>G), RS1000914773 (1:212873387 G>C), RS1000921427 (1:212878031 C>G), RS1000963358 (1:212860279 A>G), RS1001075184 (1:212859825 T>G), RS1001077425 (1:212897357 C>T), RS1001135817 (1:212870853 A>C,G), RS1001138006 (1:212896913 T>C)
Disease associations
OMIM: gene MIM:609144 | disease phenotypes: MIM:609033, MIM:268000, MIM:621060, MIM:208500, MIM:248200, MIM:162400
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| posterior column ataxia-retinitis pigmentosa syndrome | Definitive | Autosomal recessive |
| FLVCR1-related retinopathy with or without ataxia | Strong | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| FLVCR1-related retinopathy with or without ataxia | Definitive | AR |
Mondo (10): posterior column ataxia-retinitis pigmentosa syndrome (MONDO:0012177), retinitis pigmentosa (MONDO:0019200), neurodevelopmental disorder with microcephaly, absent speech, and hypotonia (MONDO:0976126), inherited retinal dystrophy (MONDO:0019118), sensory peripheral neuropathy (MONDO:0002321), Jeune syndrome (MONDO:0018770), short rib-polydactyly syndrome (MONDO:0015461), Stargardt disease (MONDO:0019353), hereditary sensory and autonomic neuropathy (MONDO:0015364), FLVCR1-related retinopathy with or without ataxia (MONDO:0100449)
Orphanet (7): Posterior column ataxia-retinitis pigmentosa syndrome (Orphanet:88628), Retinitis pigmentosa (Orphanet:791), OBSOLETE: Inherited retinal disorder (Orphanet:71862), Jeune syndrome (Orphanet:474), Short rib-polydactyly syndrome (Orphanet:1505), Stargardt disease (Orphanet:827), Hereditary sensory and autonomic neuropathy (Orphanet:140471)
HPO phenotypes
113 total (30 of 113 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000010 | Recurrent urinary tract infections |
| HP:0000011 | Neurogenic bladder |
| HP:0000020 | Urinary incontinence |
| HP:0000028 | Cryptorchidism |
| HP:0000104 | Renal agenesis |
| HP:0000105 | Enlarged kidney |
| HP:0000175 | Cleft palate |
| HP:0000218 | High palate |
| HP:0000238 | Hydrocephalus |
| HP:0000252 | Microcephaly |
| HP:0000272 | Malar flattening |
| HP:0000347 | Micrognathia |
| HP:0000369 | Low-set ears |
| HP:0000431 | Wide nasal bridge |
| HP:0000470 | Short neck |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000518 | Cataract |
| HP:0000550 | Undetectable electroretinogram |
| HP:0000572 | Visual loss |
| HP:0000580 | Pigmentary retinopathy |
| HP:0000618 | Blindness |
| HP:0000648 | Optic atrophy |
| HP:0000662 | Nyctalopia |
| HP:0000729 | Autistic behavior |
| HP:0000742 | Self-mutilation |
| HP:0000763 | Sensory neuropathy |
| HP:0000821 | Hypothyroidism |
| HP:0000879 | Short sternum |
| HP:0001059 | Pterygium |
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007800_23 | Asthma (childhood onset) | 3.000000e-10 |
| GCST010083_4 | Hemoglobin levels | 1.000000e-12 |
| GCST90002383_347 | Hematocrit | 4.000000e-09 |
| GCST90002384_25 | Hemoglobin | 7.000000e-10 |
| GCST90002385_104 | High light scatter reticulocyte count | 1.000000e-10 |
| GCST90002386_390 | High light scatter reticulocyte percentage of red cells | 5.000000e-09 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004509 | hemoglobin measurement |
| EFO:0004348 | hematocrit |
| EFO:0007986 | reticulocyte count |
MeSH disease descriptors (7)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D009477 | Hereditary Sensory and Autonomic Neuropathies | C10.500.250; C10.574.500.493; C10.668.829.800.175; C16.131.666.310; C16.320.400.415 |
| D058499 | Retinal Dystrophies | C11.768.585.658 |
| D012174 | Retinitis Pigmentosa | C11.270.684; C11.768.585.658.500; C16.320.290.684 |
| D012779 | Short Rib-Polydactyly Syndrome | C05.116.099.708.857; C05.660.585.600.750; C16.131.077.850; C16.131.621.585.600.750 |
| D000080362 | Stargardt Disease | C11.270.872; C11.768.585.439.339; C16.320.290.724 |
| C537571 | Jeune syndrome (supp.) | |
| C536343 | Posterior column ataxia with retinitis pigmentosa (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — SLC49 family of FLVCR-related heme transporters
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression, increases expression | 3 |
| FR900359 | decreases phosphorylation | 1 |
| ethylbenzene | decreases expression, increases methylation, affects cotreatment | 1 |
| alpha phellandrene | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| sodium arsenite | decreases expression | 1 |
| ICG 001 | decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Air Pollutants | decreases expression, increases abundance | 1 |
| Air Pollutants, Occupational | decreases expression, increases methylation | 1 |
| Atrazine | increases expression | 1 |
| Caffeine | decreases phosphorylation | 1 |
| Doxorubicin | decreases expression | 1 |
| Lead | affects splicing | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Toluene | affects cotreatment, decreases expression, increases methylation | 1 |
| Valproic Acid | increases expression | 1 |
| Xylenes | decreases expression, increases methylation, affects cotreatment | 1 |
| Cyclosporine | decreases expression | 1 |
| Aflatoxin B1 | decreases expression, increases methylation | 1 |
| Aflatoxin M1 | decreases expression | 1 |
| Copper Sulfate | decreases expression | 1 |
| Lactic Acid | increases expression | 1 |
| Vitamin K 3 | affects expression | 1 |
| Particulate Matter | decreases expression, increases abundance | 1 |
Cellosaurus cell lines
4 cell lines: 4 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D4FZ | HCT116-FLVCR1-KO-c10 | Cancer cell line | Male |
| CVCL_D4G0 | HCT116-FLVCR1-KO-c2 | Cancer cell line | Male |
| CVCL_SN77 | HAP1 FLVCR1 (-) 1 | Cancer cell line | Male |
| CVCL_SN78 | HAP1 FLVCR1 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
235 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00717080 | PHASE4 | COMPLETED | The Role of Capsular Tension Ring (CTR) in Anterior Capsular Contraction |
| NCT00000114 | PHASE3 | COMPLETED | Randomized Trial of Vitamin A and Vitamin E Supplementation for Retinitis Pigmentosa |
| NCT00000116 | PHASE3 | COMPLETED | Randomized Trial of DHA for Retinitis Pigmentosa Patients Receiving Vitamin A |
| NCT00346333 | PHASE3 | COMPLETED | Clinical Trial of Lutein for Patients With Retinitis Pigmentosa Receiving Vitamin A |
| NCT01786395 | PHASE3 | TERMINATED | Phase III Efficacy and Safety Clinical Study of UF-021 for Treatment of Retinitis Pigmentosa |
| NCT04224207 | PHASE3 | COMPLETED | Management of Retinitis Pigmentosa by Mesenchymal Stem Cells by Wharton’s Jelly Derived Mesenchymal Stem Cells |
| NCT04636853 | PHASE3 | COMPLETED | CB-PRP in Retinitis Pigmentosa and Dry Age-related Macular Degeneration |
| NCT05537220 | PHASE3 | ACTIVE_NOT_RECRUITING | Oral N-acetylcysteine for Retinitis Pigmentosa |
| NCT05800301 | PHASE3 | COMPLETED | Management of Retinitis Pigmentosa Via Combination of Wharton’s Jelly-derived Mesenchymal Stem Cells and Magnovision |
| NCT05926583 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study of AAV5-hRKp.RPGR for the Treatment of Japanese Participants With X-linked Retinitis Pigmentosa |
| NCT06388200 | PHASE3 | ACTIVE_NOT_RECRUITING | A Phase 3 Study Of OCU400 Gene Therapy for the Treatment Of Retinitis Pigmentosa |
| NCT07082855 | PHASE3 | NOT_YET_RECRUITING | A Multicenter, Randomized, Double-Blind, Controlled Clinical Study of Minocycline for the Treatment of Retinitis Pigmentosa |
| NCT07290530 | PHASE3 | NOT_YET_RECRUITING | 24-Month Trial of NPI-001 for the Preservation of Photoreceptors in Retinitis Pigmentosa Associated With Usher Syndrome |
| NCT00100230 | PHASE2 | COMPLETED | DHA and X-Linked Retinitis Pigmentosa |
| NCT00447980 | PHASE2 | COMPLETED | A Study of Encapsulated Cell Technology (ECT) Implant for Participants With Early Stage Retinitis Pigmentosa |
| NCT00447993 | PHASE2 | COMPLETED | A Study of Encapsulated Cell Technology (ECT) Implant for Patients With Late Stage Retinitis Pigmentosa |
| NCT01233609 | PHASE2 | COMPLETED | Trial of Oral Valproic Acid for Retinitis Pigmentosa |
| NCT01399515 | PHASE2 | COMPLETED | Efficacy and Safety of Oral Valproic Acid for Retinitis Pigmentosa |
| NCT01530659 | PHASE2 | COMPLETED | Retinal Imaging in CNTF -Releasing Encapsulated Cell Implant Treated Patients for Early-stage Retinitis Pigmentosa |
| NCT01560715 | PHASE2 | COMPLETED | Autologous Bone Marrow-Derived Stem Cells Transplantation For Retinitis Pigmentosa |
| NCT02609165 | PHASE2 | COMPLETED | Nerve Growth Factor Eye Drops Treatment in Patients With Retinitis Pigmentosa and Cystoid Macular Edema |
| NCT02661711 | PHASE2 | COMPLETED | Aflibercept for Macular Oedema With Underlying Retinitis Pigmentosa (AMOUR) Study |
| NCT02804360 | PHASE2 | UNKNOWN | Intravitreal Dexamethasone Implant in Retinitis Pigmentosa-related Macular Edema- a Retrospective Study |
| NCT02837640 | PHASE2 | UNKNOWN | Studying a Potential Protective Effect of L-Dopa on Retinitis Pigmentosa |
| NCT03073733 | PHASE2 | COMPLETED | Safety and Efficacy of Intravitreal Injection of Human Retinal Progenitor Cells in Adults With Retinitis Pigmentosa |
| NCT04068207 | PHASE2 | COMPLETED | Minocycline Treatment in Retinitis Pigmentosa |
| NCT04356716 | PHASE2 | COMPLETED | Sildenafil for Treatment of Choroidal Ischemia |
| NCT04604899 | PHASE2 | COMPLETED | Safety of Repeat Intravitreal Injection of Human Retinal Progenitor Cells (jCell) in Adult Subjects With Retinitis Pigmentosa |
| NCT04763369 | PHASE2 | UNKNOWN | Investigation of Therapeutic Efficacy and Safety of UMSCs for the Management of Retinitis Pigmentosa (RP) |
| NCT04864496 | PHASE2 | UNKNOWN | Effects of Treatment With N- Acetylcysteine on Visual Outcomes in Patients With Retinitis Pigmentosa |
| NCT04945772 | PHASE2 | COMPLETED | Efficacy and Safety of MCO-010 Optogenetic Therapy in Adults With Retinitis Pigmentosa [RESTORE] |
| NCT05085964 | PHASE2 | TERMINATED | An Open-Label Extension Study to Evaluate Safety & Tolerability of QR-421a in Subjects With Retinitis Pigmentosa |
| NCT05392179 | PHASE2 | COMPLETED | A Study in Subjects With Retinitis Pigmentosa |
| NCT06627179 | PHASE2 | RECRUITING | Study to Evaluate Ultevursen in Subjects With Retinitis Pigmentosa (RP) Due to Mutations in Exon 13 of the USH2A Gene |
| NCT06628947 | PHASE2 | RECRUITING | A Phase II Study of Intravitreal KIO-301 in Patients With Late-stage Retinitis Pigmentosa |
| NCT06912633 | PHASE2 | RECRUITING | Safety of a Single, Intravitreal Injection of 6.0M jCell (Famzeretcel) in Retinitis Pigmentosa (RP) |
| NCT00063765 | PHASE1 | COMPLETED | Evaluation of Safety of Ciliary Neurotrophic Factor Implants in the Eye |
| NCT00065455 | PHASE1 | COMPLETED | Investigating the Effect of Vitamin A Supplementation on Retinitis Pigmentosa |
| NCT00458575 | PHASE1 | TERMINATED | A Study to Evaluate the Safety of CNTO 2476 in Patients With Advanced Retinitis Pigmentosa |
| NCT01068561 | PHASE1 | COMPLETED | Autologous Bone Marrow-Derived Stem Cells Transplantation For Retinitis Pigmentosa |
Related Atlas pages
- Associated diseases: posterior column ataxia-retinitis pigmentosa syndrome, FLVCR1-related retinopathy with or without ataxia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): FLVCR1-related retinopathy with or without ataxia, hereditary sensory and autonomic neuropathy, Jeune syndrome, neurodevelopmental disorder with microcephaly, absent speech, and hypotonia, posterior column ataxia-retinitis pigmentosa syndrome, sensory peripheral neuropathy, short rib-polydactyly syndrome, Stargardt disease