FMO1-AS1

Summary

FMO1-AS1 (FMO1 antisense RNA 1, HGNC:40240) is a long non-coding RNA gene on chromosome 1q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40240
Approved symbol	FMO1-AS1
Name	FMO1 antisense RNA 1
Location	1q24.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231424
Ensembl biotype	lncRNA
Entrez	105371611
RNAcentral	URS0000EF2E5F — lncRNA, 4598 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000455124, ENST00000653116, ENST00000664920, ENST00000669750, ENST00000670085, ENST00000729762, ENST00000729763, ENST00000739824, ENST00000739825, ENST00000739826, ENST00000739827, ENST00000739828, ENST00000739829, ENST00000739830, ENST00000739831

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455124 — 2 exons

Exon	Start	End
ENSE00001594871	171251523	171251794
ENSE00001680097	171247580	171247723

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 76.71.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.71	gold quality
bone marrow cell	CL:0002092	74.97	gold quality
hindlimb stylopod muscle	UBERON:0004252	70.94	gold quality
sural nerve	UBERON:0015488	65.99	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.97	gold quality
bone marrow	UBERON:0002371	65.66	gold quality
ventricular zone	UBERON:0003053	65.49	gold quality
colonic epithelium	UBERON:0000397	62.61	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	62.50	gold quality
ganglionic eminence	UBERON:0004023	61.93	gold quality
esophagus mucosa	UBERON:0002469	61.58	gold quality
tonsil	UBERON:0002372	60.14	gold quality
skeletal muscle tissue	UBERON:0001134	59.68	silver quality
right atrium auricular region	UBERON:0006631	59.62	gold quality
duodenum	UBERON:0002114	59.48	gold quality
superior frontal gyrus	UBERON:0002661	58.82	gold quality
substantia nigra	UBERON:0002038	57.75	gold quality
lymph node	UBERON:0000029	56.21	gold quality
hypothalamus	UBERON:0001898	56.14	gold quality
monocyte	CL:0000576	55.41	gold quality
esophagus	UBERON:0001043	55.23	gold quality
leukocyte	CL:0000738	55.07	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	54.97	gold quality
small intestine	UBERON:0002108	54.89	gold quality
corpus callosum	UBERON:0002336	54.86	gold quality
thoracic mammary gland	UBERON:0005200	54.24	gold quality
amygdala	UBERON:0001876	54.19	gold quality
heart	UBERON:0000948	54.16	gold quality
prefrontal cortex	UBERON:0000451	54.04	gold quality
muscle tissue	UBERON:0002385	53.99	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-HCAD-25	yes	26.11
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.