FNDC1-AS1

Summary

FNDC1-AS1 (FNDC1 antisense RNA 1, HGNC:55706) is a long non-coding RNA gene on chromosome 6q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55706
Approved symbol	FNDC1-AS1
Name	FNDC1 antisense RNA 1
Location	6q25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233682
Ensembl biotype	lncRNA
Entrez	101929122
RNAcentral	URS000075CD5F — lncRNA, 834 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000419064, ENST00000608986, ENST00000815694, ENST00000815695, ENST00000815696, ENST00000815697

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419064 — 4 exons

Exon	Start	End
ENSE00004217923	159167249	159167354
ENSE00004217925	159165240	159166188
ENSE00004217927	159169812	159170059
ENSE00004217928	159168533	159168761

Expression profiles

Bgee: expression breadth ubiquitous, 144 present calls, max score 92.55.

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.55	gold quality
tibial nerve	UBERON:0001323	84.75	gold quality
right lobe of thyroid gland	UBERON:0001119	82.17	gold quality
left lobe of thyroid gland	UBERON:0001120	82.15	gold quality
sural nerve	UBERON:0015488	81.46	gold quality
thyroid gland	UBERON:0002046	81.45	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.10	gold quality
tendon of biceps brachii	UBERON:0008188	79.16	silver quality
ventricular zone	UBERON:0003053	74.08	gold quality
tibia	UBERON:0000979	73.51	silver quality
tendon	UBERON:0000043	72.59	gold quality
calcaneal tendon	UBERON:0003701	70.99	gold quality
muscle layer of sigmoid colon	UBERON:0035805	66.93	gold quality
gall bladder	UBERON:0002110	64.91	gold quality
cartilage tissue	UBERON:0002418	64.81	gold quality
descending thoracic aorta	UBERON:0002345	64.11	gold quality
ascending aorta	UBERON:0001496	63.99	gold quality
Ammon’s horn	UBERON:0001954	63.89	gold quality
thoracic aorta	UBERON:0001515	63.70	gold quality
lower esophagus muscularis layer	UBERON:0035833	61.11	gold quality
lower esophagus	UBERON:0013473	61.09	gold quality
ectocervix	UBERON:0012249	60.86	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.83	gold quality
aorta	UBERON:0000947	60.36	gold quality
endocervix	UBERON:0000458	59.66	gold quality
pancreatic ductal cell	CL:0002079	59.54	silver quality
uterine cervix	UBERON:0000002	58.86	gold quality
smooth muscle tissue	UBERON:0001135	58.84	gold quality
buccal mucosa cell	CL:0002336	58.31	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	58.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.