FOLH1
gene geneOn this page
Also known as PSMPSMANAALAD1NAALAdaseGCP2GCPII
Summary
FOLH1 (folate hydrolase 1, HGNC:3788) is a protein-coding gene on chromosome 11p11.12, encoding Glutamate carboxypeptidase 2 (Q04609). Has both folate hydrolase and N-acetylated-alpha-linked-acidic dipeptidase (NAALADase) activity.
This gene encodes a type II transmembrane glycoprotein belonging to the M28 peptidase family. The protein acts as a glutamate carboxypeptidase on different alternative substrates, including the nutrient folate and the neuropeptide N-acetyl-l-aspartyl-l-glutamate and is expressed in a number of tissues such as prostate, central and peripheral nervous system and kidney. A mutation in this gene may be associated with impaired intestinal absorption of dietary folates, resulting in low blood folate levels and consequent hyperhomocysteinemia. Expression of this protein in the brain may be involved in a number of pathological conditions associated with glutamate excitotoxicity. In the prostate the protein is up-regulated in cancerous cells and is used as an effective diagnostic and prognostic indicator of prostate cancer. This gene likely arose from a duplication event of a nearby chromosomal region. Alternative splicing gives rise to multiple transcript variants encoding several different isoforms.
Source: NCBI Gene 2346 — RefSeq curated summary.
At a glance
- GWAS associations: 22
- Clinical variants (ClinVar): 93 total
- Druggable target: yes — 7 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_004476
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3788 |
| Approved symbol | FOLH1 |
| Name | folate hydrolase 1 |
| Location | 11p11.12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PSM, PSMA, NAALAD1, NAALAdase, GCP2, GCPII |
| Ensembl gene | ENSG00000086205 |
| Ensembl biotype | protein_coding |
| OMIM | 600934 |
| Entrez | 2346 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 10 protein_coding, 4 retained_intron, 3 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000256999, ENST00000340334, ENST00000356696, ENST00000458311, ENST00000525629, ENST00000525826, ENST00000526226, ENST00000529117, ENST00000529646, ENST00000529648, ENST00000532018, ENST00000533034, ENST00000533510, ENST00000897368, ENST00000897369, ENST00000897370, ENST00000953048, ENST00000953049
RefSeq mRNA: 6 — MANE Select: NM_004476
NM_001014986, NM_001193471, NM_001193472, NM_001193473, NM_001351236, NM_004476
CCDS: CCDS31493, CCDS53627, CCDS53628, CCDS7946
Canonical transcript exons
ENST00000256999 — 19 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001627795 | 49185669 | 49185855 |
| ENSE00003459309 | 49156717 | 49156807 |
| ENSE00003471104 | 49173357 | 49173476 |
| ENSE00003471979 | 49171195 | 49171277 |
| ENSE00003489243 | 49175859 | 49175957 |
| ENSE00003510751 | 49169195 | 49169258 |
| ENSE00003521929 | 49153846 | 49153927 |
| ENSE00003539450 | 49200255 | 49200441 |
| ENSE00003554421 | 49148639 | 49148731 |
| ENSE00003555470 | 49164705 | 49164772 |
| ENSE00003558288 | 49174892 | 49174977 |
| ENSE00003590268 | 49206067 | 49206172 |
| ENSE00003596455 | 49192793 | 49192894 |
| ENSE00003639838 | 49186644 | 49186769 |
| ENSE00003641088 | 49154228 | 49154492 |
| ENSE00003656272 | 49208292 | 49208602 |
| ENSE00003660926 | 49183149 | 49183242 |
| ENSE00003678748 | 49157952 | 49158043 |
| ENSE00003693627 | 49145092 | 49146945 |
Expression profiles
Bgee: expression breadth ubiquitous, 138 present calls, max score 99.33.
FANTOM5 (CAGE): breadth broad, TPM avg 5.2900 / max 482.8214, expressed in 278 samples.
FANTOM5 promoters (9 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 119687 | 1.2420 | 200 |
| 119686 | 1.0220 | 124 |
| 119684 | 0.9753 | 116 |
| 119683 | 0.9321 | 92 |
| 119689 | 0.5186 | 104 |
| 119688 | 0.2303 | 109 |
| 206281 | 0.1544 | 57 |
| 119685 | 0.1269 | 69 |
| 119682 | 0.0885 | 53 |
Top tissues by expression
157 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| duodenum | UBERON:0002114 | 99.33 | gold quality |
| corpus callosum | UBERON:0002336 | 97.43 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 96.45 | gold quality |
| spinal cord | UBERON:0002240 | 95.92 | gold quality |
| substantia nigra | UBERON:0002038 | 93.27 | gold quality |
| Ammon’s horn | UBERON:0001954 | 91.31 | gold quality |
| putamen | UBERON:0001874 | 90.67 | gold quality |
| prostate gland | UBERON:0002367 | 89.90 | gold quality |
| amygdala | UBERON:0001876 | 88.72 | gold quality |
| temporal lobe | UBERON:0001871 | 88.27 | gold quality |
| liver | UBERON:0002107 | 88.08 | gold quality |
| gall bladder | UBERON:0002110 | 86.91 | gold quality |
| caudate nucleus | UBERON:0001873 | 86.58 | gold quality |
| ventricular zone | UBERON:0003053 | 85.96 | gold quality |
| right lobe of liver | UBERON:0001114 | 85.60 | gold quality |
| primary visual cortex | UBERON:0002436 | 85.21 | gold quality |
| hypothalamus | UBERON:0001898 | 85.17 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 84.93 | gold quality |
| ganglionic eminence | UBERON:0004023 | 82.80 | gold quality |
| prefrontal cortex | UBERON:0000451 | 82.56 | gold quality |
| nucleus accumbens | UBERON:0001882 | 82.24 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 81.88 | gold quality |
| cerebral cortex | UBERON:0000956 | 81.58 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 81.46 | gold quality |
| frontal cortex | UBERON:0001870 | 81.07 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 80.69 | gold quality |
| right frontal lobe | UBERON:0002810 | 80.18 | gold quality |
| minor salivary gland | UBERON:0001830 | 80.02 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 79.38 | gold quality |
| central nervous system | UBERON:0001017 | 79.21 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 15.82 |
| E-MTAB-6678 | yes | 12.80 |
| E-GEOD-84465 | yes | 9.75 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AR, ELF3, ELF5, ETS1, NFATC1, VDR
miRNA regulators (miRDB)
8 targeting FOLH1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-140-3P | 99.04 | 67.69 | 1324 |
| HSA-MIR-4272 | 98.76 | 68.74 | 1810 |
| HSA-MIR-660-5P | 98.16 | 68.27 | 680 |
| HSA-MIR-1236-5P | 96.62 | 66.38 | 856 |
| HSA-MIR-5591-3P | 96.23 | 67.03 | 489 |
Literature-anchored findings (GeneRIF, showing 40)
- expressed in prostate tissue, and especially in prostate cancer tissue (PMID:12474535)
- GCP2 polymorphism explained nearly 50% of the variance of red blood cell folate in ESRD (PMID:12707400)
- GCP2 1561C>T is associated with elevated folate levels but not homocysteine levels in kidney transplant patients (PMID:12753319)
- PSMA expression is regulated by NFATc1 with an AP-3 binding site (PMID:12850144)
- N-linked carbohydrate structures are important for the folate hydrolase function of the protein. Removal of sugars partially or completely causes PSMA to be enzymatically inactive, improperly folded, resulting in increased rate of degradation. (PMID:12949938)
- PSMA is internalized via a clathrin-dependent endocytic mechanism and that internalization of PSMA is mediated by the five N-terminal amino acids (PMID:14528023)
- proteins binding PSMA (PMID:15141017)
- Analysis of the predicted N-glycosylation sites also provides evidence that these sites are critical for GCPII carboxypeptidase activity (PMID:15152093)
- amino acid segments at the N- and C-termini of the ectodomain of GCPII are essential for its carboxypeptidase activity and/or proper folding (PMID:15206943)
- PSMA gene lacks specificity for detecting prostate epithelial cells (PMID:15389976)
- Knockdown of PSMA expression increased invasiveness of LNCaP cells by 5-fold. (PMID:15705868)
- Transcriptional activity of the PSMA promoter/enhancer is prostate specific. (PMID:15713827)
- Structure and relevance to the development of chemotherapeutics and cancer-imaging agents. (PMID:15837926)
- PSMA may function as a receptor internalizing a putative ligand, an enzyme playing a role in nutrient uptake, and a peptidase involved in signal transduction in prostate epithelial cells. [review] (PMID:15840561)
- acquisition of folding determinants in the Golgi is an essential prerequisite for protein trafficking and sorting of PSMA (PMID:16221666)
- The folate hydrolase activity of PSMA may provide a growth advantage to prostate cancer cells in low folate and physiological folate environments. (PMID:16496414)
- PSMA binds to caveolin-1 and undergoes internalization via a caveolae-dependent mechanism in microvascular endothelial cells (PMID:16713605)
- In suicide gene therapy, anti-PSMA-liposome complex exerted a significant inhibitory effect on the growth of LNCaP xenograft, in contrast to normal IgG-liposome complex. (PMID:17032155)
- Using pure recombinant GCPII and homologous GCPIII, we conclude that GCPII is responsible for the majority of overall NAAG-hydrolyzing activity in the human brain. (PMID:17150306)
- Polymorphism is associated with higher plasma folate and lower homocysteine concentrations in women who abstain from alcohol. (PMID:17684227)
- Pattern differences in GCP II gene promoter expression in SVG and LNCaP cells suggest that sequences beyond 240 bp may be important for tissue-specific GCP II expression. (PMID:17689503)
- the residues forming the S1 pocket might be more important for the ‘fine-tuning’ of GCPII substrate specificity (PMID:17714508)
- the intracellular transport of PSMA occurs through populations of DRMs distinct for each biosynthetic form and cellular compartment (PMID:17935484)
- Tissues such as prostate and testes exhibit different GCPII expression levels among the species studied (human, rats, swine). (PMID:18076021)
- Crystal structures of human GCPII in complex with phosphapeptide analogs show the S1 pocket of GCPII and the data indicate the importance of Asn519, Arg463, Arg534, and Arg536 for recognition of the penultimate (i.e., P1) substrate residues. (PMID:18234225)
- prostate-specific membrane antigen is expressed in tumor-associated neovasculature of the majority of renal cortical tumors (PMID:18344976)
- PSMA is underexpressed in advanced stage endometrial adenocarcinoma (EAC); loss of PSMA expression can be considered as a prognostic marker in patients with EAC; loss of PSMA expression in a subset of EAC cases could be due to epigenetic silencing (PMID:18349274)
- Given our finding of frequent expression of PSMA in Schwannomas, they should be clinically considered in the differential diagnosis of a lesion that is positive on PSMA radioimmunoscintigraphy study performed during a metastatic work-up of PCa patient. (PMID:18534872)
- the efficacy of 5-FU-based chemotherapy in prostate cancers can be significantly improved by targeted expression of the suicide gene UPRT under the control of prostate-specific membrane antigen promoter/enhancer (PMID:18626508)
- The present study describes an efficient RNAi system for gene silencing that is specific to prostate cancer cells using the PSMA promoter/enhancer (PMID:18639471)
- Neonatal methylmalonic acid was predicted by maternal methylmalonic acid and GCPII (PMID:18823966)
- prostate-specific membrane antigen is expressed in neovasculature from physiologic regenerative and reparative conditions (PMID:18839017)
- PSMA was the most useful marker to identify residual prostatic carcinoma after hormone therapy. (PMID:18844933)
- Ectopic PSMA expression on PC-3 cells increased the invasive capacity of cells in in vitro invasion assays, which could be competed out by folic acid. These results suggest PSMA facilitates the development of prostate cancer (PMID:18974153)
- analysis of interactions between human glutamate carboxypeptidase II and urea-based inhibitors (PMID:19053759)
- PSM’ protein is likely not generated by alternative splicing of the PSMA gene but by different mechanism, probably via an endoproteolytic cleavage of the full-length PSMA. (PMID:19107881)
- although the RFC1 80G > A and FOLH1 1561C > T polymorphisms may influence folate status, they are not likely to have a major independent role in the development of colorectal cancer (PMID:19172696)
- PSMA-fostered RAS-RAC1-MAPK pathway activation produced a strong induction of NF-kappaB activation associated with an increased expression of IL-6 and CCL5 genes. (PMID:19242540)
- Reaction mechanisms of GCPII revealed by mutagenesis, X-ray crystallography, and computational methods. (PMID:19301871)
- PSMA and prostate stem cell antigen are both highly expressed in lymph node and bone metastases of prostate cancer. (PMID:19343734)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | naalad2 | ENSDARG00000021383 |
| mus_musculus | Folh1 | ENSMUSG00000001773 |
| rattus_norvegicus | Folh1 | ENSRNOG00000013770 |
| caenorhabditis_elegans | WBGENE00007954 | |
| caenorhabditis_elegans | WBGENE00020082 |
Paralogs (5): TFRC (ENSG00000072274), NAALAD2 (ENSG00000077616), TFR2 (ENSG00000106327), NAALADL1 (ENSG00000168060), NAALADL2 (ENSG00000177694)
Protein
Protein identifiers
Glutamate carboxypeptidase 2 — Q04609 (reviewed: Q04609)
Alternative names: Cell growth-inhibiting gene 27 protein, Folate hydrolase 1, Folylpoly-gamma-glutamate carboxypeptidase, Glutamate carboxypeptidase II, Membrane glutamate carboxypeptidase, N-acetylated-alpha-linked acidic dipeptidase I, Prostate-specific membrane antigen, Pteroylpoly-gamma-glutamate carboxypeptidase
All UniProt accessions (5): Q04609, E9PI29, E9PKM3, E9PLV0, E9PMK6
UniProt curated annotations — full annotation on UniProt →
Function. Has both folate hydrolase and N-acetylated-alpha-linked-acidic dipeptidase (NAALADase) activity. Has a preference for tri-alpha-glutamate peptides. In the intestine, required for the uptake of folate. In the brain, modulates excitatory neurotransmission through the hydrolysis of the neuropeptide, N-aceylaspartylglutamate (NAAG), thereby releasing glutamate. Involved in prostate tumor progression. Also exhibits a dipeptidyl-peptidase IV type activity. In vitro, cleaves Gly-Pro-AMC.
Subunit / interactions. Homodimer.
Subcellular location. Cell membrane Cytoplasm.
Tissue specificity. Highly expressed in prostate epithelium. Detected in urinary bladder, kidney, testis, ovary, fallopian tube, breast, adrenal gland, liver, esophagus, stomach, small intestine, colon and brain (at protein level). Detected in the small intestine, brain, kidney, liver, spleen, colon, trachea, spinal cord and the capillary endothelium of a variety of tumors. Expressed specifically in jejunum brush border membranes. In the brain, highly expressed in the ventral striatum and brain stem. Also expressed in fetal liver and kidney. Isoform PSMA’ is the most abundant form in normal prostate. Isoform PSMA-1 is the most abundant form in primary prostate tumors. Isoform PSMA-9 is specifically expressed in prostate cancer.
Post-translational modifications. The first two amino acids at the N-terminus of isoform PSMA’ appear to be cleaved by limited proteolysis. The N-terminus is blocked.
Activity regulation. The NAALADase activity is inhibited by beta-NAAG, quisqualic acid, 2-(phosphonomethyl) pentanedioic acid (PMPA) and EDTA. Activated by cobalt.
Cofactor. Binds 2 Zn(2+) ions per subunit. Required for NAALADase activity.
Domain organisation. The NAALADase activity is found in the central region, the dipeptidyl peptidase IV type activity in the C-terminal.
Induction. In the prostate, up-regulated in response to androgen deprivation.
Polymorphism. Genetic variation in FOLH1 may be associated with low folate levels and consequent hyperhomocysteinemia. This condition can result in increased risk of cardiovascular disease, neural tube defects, and cognitive deficits.
Miscellaneous. PSMA is used as a diagnostic and prognostic indicator of prostate cancer, and as a possible marker for various neurological disorders such as schizophrenia, Alzheimer disease and Huntington disease.
Similarity. Belongs to the peptidase M28 family. M28B subfamily.
Isoforms (8)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q04609-1 | PSMA-1 | yes |
| Q04609-3 | PSMA-3 | |
| Q04609-4 | PSMA-4 | |
| Q04609-6 | PSMA’ | |
| Q04609-7 | PSMA-7 | |
| Q04609-8 | PSMA-8 | |
| Q04609-9 | PSMA-9, PSM-E | |
| Q04609-10 | 10 |
RefSeq proteins (6): NP_001014986, NP_001180400, NP_001180401, NP_001180402, NP_001338165, NP_004467* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003137 | PA_domain | Domain |
| IPR007365 | TFR-like_dimer_dom | Domain |
| IPR007484 | Peptidase_M28 | Domain |
| IPR036757 | TFR-like_dimer_dom_sf | Homologous_superfamily |
| IPR039373 | Peptidase_M28B | Family |
| IPR046450 | PA_dom_sf | Homologous_superfamily |
Pfam: PF02225, PF04253, PF04389
Enzyme classification (BRENDA):
- EC 3.4.17.21 — glutamate carboxypeptidase II (BRENDA: 10 organisms, 60 substrates, 336 inhibitors, 15 Km, 14 kcat entries)
Substrate kinetics (BRENDA)
5 substrates with measured Km, best-characterized 5. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| N-ACETYL-L-ASP-L-GLU | 0.0001–540 | 6 |
| N-ACETYL-ALPHA-L-ASPARTYL-L-GLUTAMATE | 0.0001–0.0003 | 4 |
| N-ACETYL-L-ASPARTYL-L-GLUTAMATE | 0.0006–0.0019 | 2 |
| PTEROYL-DI-L-GLUTAMATE | — | 2 |
| N-ACETYL-ASP-GLU | 130 | 1 |
UniProt features (140 total): strand 30, helix 28, mutagenesis site 23, binding site 19, glycosylation site 10, splice variant 7, turn 6, sequence variant 4, active site 4, sequence conflict 3, topological domain 2, chain 1, transmembrane region 1, modified residue 1, region of interest 1
Structure
Experimental structures (PDB)
88 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5O5T | X-RAY DIFFRACTION | 1.43 |
| 5OF0 | X-RAY DIFFRACTION | 1.48 |
| 3BI1 | X-RAY DIFFRACTION | 1.5 |
| 6FE5 | X-RAY DIFFRACTION | 1.52 |
| 5O5U | X-RAY DIFFRACTION | 1.53 |
| 3D7F | X-RAY DIFFRACTION | 1.54 |
| 3D7H | X-RAY DIFFRACTION | 1.55 |
| 8BO8 | X-RAY DIFFRACTION | 1.55 |
| 8BOL | X-RAY DIFFRACTION | 1.55 |
| 6SGP | X-RAY DIFFRACTION | 1.58 |
| 6SKH | X-RAY DIFFRACTION | 1.58 |
| 8BOW | X-RAY DIFFRACTION | 1.58 |
| 2XEF | X-RAY DIFFRACTION | 1.59 |
| 2XEG | X-RAY DIFFRACTION | 1.59 |
| 3BHX | X-RAY DIFFRACTION | 1.6 |
| 3RBU | X-RAY DIFFRACTION | 1.6 |
| 6EZ9 | X-RAY DIFFRACTION | 1.61 |
| 2OR4 | X-RAY DIFFRACTION | 1.62 |
| 4NGP | X-RAY DIFFRACTION | 1.63 |
| 6F5L | X-RAY DIFFRACTION | 1.63 |
| 2OOT | X-RAY DIFFRACTION | 1.64 |
| 4NGN | X-RAY DIFFRACTION | 1.64 |
| 4W9Y | X-RAY DIFFRACTION | 1.64 |
| 3SJF | X-RAY DIFFRACTION | 1.65 |
| 3SJG | X-RAY DIFFRACTION | 1.65 |
| 4MCP | X-RAY DIFFRACTION | 1.65 |
| 4MCR | X-RAY DIFFRACTION | 1.65 |
| 4OC2 | X-RAY DIFFRACTION | 1.65 |
| 4P4D | X-RAY DIFFRACTION | 1.65 |
| 5O5R | X-RAY DIFFRACTION | 1.65 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q04609-F1 | 93.89 | 0.89 |
Antibody-complex structures (SAbDab): 3 — 9HLW, 9HVI, 9HVK
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (4): 424 (nucleophile; for naaladase activity); 628 (charge relay system); 666 (charge relay system); 689 (charge relay system)
Ligand- & substrate-binding residues (19): 257; 269; 272; 377; 387; 387; 424; 425; 433; 436; 453; 517–518 …
Post-translational modifications (1): 10
Glycosylation sites (10): 51, 76, 121, 140, 153, 195, 336, 459, 476, 638
Mutagenesis-validated functional residues (23):
| Position | Phenotype |
|---|---|
| 51 | loss of glycosylation. reduces enzyme activity. |
| 76 | loss of glycosylation. reduces enzyme activity. |
| 121 | loss of glycosylation. severely reduced enzyme activity. |
| 140 | loss of glycosylation. severely reduced enzyme activity. |
| 153 | loss of glycosylation. severely reduced enzyme activity. |
| 195 | loss of glycosylation. severely reduced enzyme activity. |
| 336 | loss of glycosylation. reduces enzyme activity. |
| 377 | complete loss of activity. |
| 379 | complete loss of activity. |
| 387 | complete loss of activity. |
| 387 | no effect on enzyme activity. |
| 388 | no effect on enzyme activity. |
| 424 | complete loss of activity. |
| 424 | reduces enzyme activity. |
| 425 | complete loss of activity. |
| 453 | complete loss of activity. |
| 453 | reduces enzyme activity. |
| 454 | reduces enzyme activity. |
| 459 | loss of glycosylation. reduces enzyme activity. |
| 476 | loss of glycosylation. reduces enzyme activity. |
| 638 | loss of glycosylation. abolishes enzyme activity. |
| 640 | abolishes enzyme activity. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-8963693 | Aspartate and asparagine metabolism |
MSigDB gene sets: 96 (showing top):
GSE18804_BRAIN_VS_COLON_TUMORAL_MACROPHAGE_DN, MODULE_172, GOBP_DIGESTION, GOBP_GLUTAMINE_FAMILY_AMINO_ACID_BIOSYNTHETIC_PROCESS, GOMF_METALLOPEPTIDASE_ACTIVITY, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, GOBP_GLUTAMATE_METABOLIC_PROCESS, ASTON_MAJOR_DEPRESSIVE_DISORDER_DN, ROVERSI_GLIOMA_COPY_NUMBER_UP, GOCC_CELL_SURFACE, GOBP_AMINO_ACID_BIOSYNTHETIC_PROCESS, GOBP_GLUTAMINE_FAMILY_AMINO_ACID_METABOLIC_PROCESS, GOBP_ORGANIC_ACID_BIOSYNTHETIC_PROCESS, RODWELL_AGING_KIDNEY_NO_BLOOD_DN, GOBP_DICARBOXYLIC_ACID_METABOLIC_PROCESS
GO Biological Process (5): proteolysis (GO:0006508), obsolete glutamate biosynthetic process (GO:0006537), folic acid-containing compound metabolic process (GO:0006760), intestinal folate absorption (GO:0098829), positive regulation of glutamate receptor signaling pathway (GO:1900451)
GO Molecular Function (11): carboxypeptidase activity (GO:0004180), metallocarboxypeptidase activity (GO:0004181), peptidase activity (GO:0008233), dipeptidase activity (GO:0016805), metal ion binding (GO:0046872), Ac-Asp-Glu binding (GO:1904492), tetrahydrofolyl-poly(glutamate) polymer binding (GO:1904493), catalytic activity (GO:0003824), protein binding (GO:0005515), metallopeptidase activity (GO:0008237), hydrolase activity (GO:0016787)
GO Cellular Component (5): cytoplasm (GO:0005737), plasma membrane (GO:0005886), cell surface (GO:0009986), membrane (GO:0016020), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Metabolism of amino acids and derivatives | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| exopeptidase activity | 2 |
| protein metabolic process | 1 |
| modified amino acid metabolic process | 1 |
| pteridine-containing compound metabolic process | 1 |
| intestinal absorption | 1 |
| glutamate receptor signaling pathway | 1 |
| positive regulation of signal transduction | 1 |
| regulation of glutamate receptor signaling pathway | 1 |
| carboxypeptidase activity | 1 |
| metalloexopeptidase activity | 1 |
| hydrolase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| cation binding | 1 |
| anion binding | 1 |
| oligopeptide binding | 1 |
| small molecule binding | 1 |
| molecular_function | 1 |
| binding | 1 |
| peptidase activity | 1 |
| catalytic activity | 1 |
| intracellular anatomical structure | 1 |
| membrane | 1 |
| cell periphery | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
1786 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FOLH1 | KLK3 | P07288 | 939 |
| FOLH1 | PSCA | O43653 | 910 |
| FOLH1 | ERBB2 | P04626 | 824 |
| FOLH1 | GRPR | P30550 | 819 |
| FOLH1 | FOLR1 | P15328 | 817 |
| FOLH1 | FOLR3 | P41439 | 798 |
| FOLH1 | ALB | P02768 | 797 |
| FOLH1 | IZUMO1R | A6ND01 | 790 |
| FOLH1 | FOLR2 | P14207 | 783 |
| FOLH1 | EGFR | P00533 | 780 |
| FOLH1 | GRP | P07491 | 777 |
| FOLH1 | MUC1 | P13931 | 758 |
| FOLH1 | DPP4 | P27487 | 758 |
| FOLH1 | MSLN | Q13421 | 755 |
| FOLH1 | TNFRSF9 | Q07011 | 754 |
IntAct
9 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FOLH1 | Dlg4 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| FOLH1 | MTAP | psi-mi:“MI:0915”(physical association) | 0.370 |
| RPS3 | FOLH1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MME | psi-mi:“MI:0914”(association) | 0.350 | |
| TEX101 | GGT3P | psi-mi:“MI:0914”(association) | 0.350 |
| SLC2A8 | FOLH1 | psi-mi:“MI:0914”(association) | 0.350 |
| FOLH1 | GLG1 | psi-mi:“MI:0914”(association) | 0.350 |
| LCOR | FOLH1 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (18): CTH (Co-fractionation), FOLH1 (Affinity Capture-RNA), FOLH1 (Affinity Capture-Western), HDAC1 (Affinity Capture-Western), FOLH1 (Affinity Capture-Western), C3orf52 (Two-hybrid), DDX21 (Proximity Label-MS), FOLH1 (Affinity Capture-MS), FOLH1 (Affinity Capture-MS), GLG1 (Affinity Capture-MS), NAALAD2 (Affinity Capture-MS), FOLH1 (Affinity Capture-MS), FOLH1 (Two-hybrid), FOLH1 (Affinity Capture-MS), ITGB4 (Affinity Capture-Western)
ESM2 similar proteins: A3KG59, A4IFH5, B9N1F9, D3ZVR9, O04059, O35331, O35621, O46560, P11172, P24298, P37111, Q03154, Q04609, Q15124, Q17QK3, Q2R483, Q501L1, Q5E9T8, Q5I0K3, Q5NAY4, Q5R514, Q5R5C9, Q5RDE7, Q5RDN7, Q5RFB0, Q5RFI8, Q6AY30, Q6AYS7, Q6K2E8, Q6PTT0, Q6Q0N1, Q6ZV70, Q7TSV4, Q7X7L3, Q8BZF8, Q8CG45, Q8CG76, Q8IYS1, Q8K183, Q8N0X4
Diamond homologs: A0A1D6L709, B2GUY2, D4B1R0, O35409, O43023, O54697, O77564, P70627, P91406, Q04609, Q5RDH6, Q5WN23, Q7M758, Q7Y228, Q852M4, Q9CZR2, Q9HBA9, Q9JKX3, Q9M1S8, Q9UP52, Q9UQQ1, Q9Y3Q0, A4R017, A6REE0, B2W3C7, B2W572, B6K327, C4JHZ6, C5FP82, C9SPU8, D4AM42, D4D8N9, E3RJ99, E3S5D4, E4URG0, E5A6Z0, E5R501, Q01693, Q0UNS4, Q2U1F3
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
93 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 64 |
| Likely benign | 10 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
3311 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:49153844:A:AC | donor_gain | 1.0000 |
| 11:49153845:C:CC | donor_gain | 1.0000 |
| 11:49153845:CTTG:C | donor_gain | 1.0000 |
| 11:49156714:TA:T | donor_loss | 1.0000 |
| 11:49156715:A:AC | donor_gain | 1.0000 |
| 11:49156715:A:T | donor_loss | 1.0000 |
| 11:49156715:AC:A | donor_gain | 1.0000 |
| 11:49156715:ACC:A | donor_gain | 1.0000 |
| 11:49156716:C:CT | donor_gain | 1.0000 |
| 11:49156716:CC:C | donor_gain | 1.0000 |
| 11:49156716:CCC:C | donor_gain | 1.0000 |
| 11:49156716:CCCA:C | donor_gain | 1.0000 |
| 11:49156716:CCCAA:C | donor_gain | 1.0000 |
| 11:49156803:TTATC:T | acceptor_gain | 1.0000 |
| 11:49156804:TATC:T | acceptor_gain | 1.0000 |
| 11:49156804:TATCC:T | acceptor_gain | 1.0000 |
| 11:49156805:ATCCT:A | acceptor_gain | 1.0000 |
| 11:49156806:TC:T | acceptor_gain | 1.0000 |
| 11:49156806:TCC:T | acceptor_loss | 1.0000 |
| 11:49156806:TCCTT:T | acceptor_gain | 1.0000 |
| 11:49156807:CCTT:C | acceptor_gain | 1.0000 |
| 11:49156808:C:CC | acceptor_gain | 1.0000 |
| 11:49156808:C:T | acceptor_gain | 1.0000 |
| 11:49156809:T:A | acceptor_loss | 1.0000 |
| 11:49156809:T:C | acceptor_gain | 1.0000 |
| 11:49156809:T:TC | acceptor_gain | 1.0000 |
| 11:49156810:T:TC | acceptor_gain | 1.0000 |
| 11:49156811:T:C | acceptor_gain | 1.0000 |
| 11:49156811:T:TC | acceptor_gain | 1.0000 |
| 11:49156817:A:AC | acceptor_gain | 1.0000 |
AlphaMissense
4942 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:49171242:A:G | W421R | 0.999 |
| 11:49171242:A:T | W421R | 0.999 |
| 11:49171243:G:C | S420R | 0.998 |
| 11:49171243:G:T | S420R | 0.998 |
| 11:49171245:T:G | S420R | 0.998 |
| 11:49171236:C:G | A423P | 0.997 |
| 11:49171240:C:A | W421C | 0.996 |
| 11:49171240:C:G | W421C | 0.996 |
| 11:49200368:A:G | W100R | 0.996 |
| 11:49200368:A:T | W100R | 0.996 |
| 11:49171261:T:A | R414S | 0.995 |
| 11:49171261:T:G | R414S | 0.995 |
| 11:49173441:A:G | W381R | 0.995 |
| 11:49173441:A:T | W381R | 0.995 |
| 11:49173447:C:G | D379H | 0.995 |
| 11:49173449:C:G | R378P | 0.995 |
| 11:49173467:A:T | V372D | 0.995 |
| 11:49186656:G:C | F209L | 0.995 |
| 11:49186656:G:T | F209L | 0.995 |
| 11:49186658:A:G | F209L | 0.995 |
| 11:49169214:A:C | N451K | 0.994 |
| 11:49169214:A:T | N451K | 0.994 |
| 11:49171215:C:G | G430R | 0.994 |
| 11:49173446:T:A | D379V | 0.993 |
| 11:49156781:T:A | D520V | 0.992 |
| 11:49156782:C:G | D520H | 0.992 |
| 11:49171211:G:A | S431F | 0.992 |
| 11:49171214:C:T | G430D | 0.992 |
| 11:49171262:C:G | R414T | 0.992 |
| 11:49173412:A:C | S390R | 0.992 |
dbSNP variants (sampled 300 via entrez): RS1000202032 (11:49170981 T>C), RS1000360408 (11:49177490 A>T), RS1000467076 (11:49183593 A>G), RS1000516092 (11:49191076 A>G), RS1000636387 (11:49146199 C>T), RS1000747212 (11:49197368 C>T), RS1000785326 (11:49153099 A>G), RS1000817978 (11:49184025 A>T), RS1000874288 (11:49204746 C>G), RS1000896133 (11:49160397 T>C), RS1000954461 (11:49166541 T>A), RS1001009793 (11:49166162 T>A,C), RS1001179831 (11:49196900 A>C), RS1001348529 (11:49160076 C>T), RS1001362467 (11:49179221 G>A)
Disease associations
OMIM: gene MIM:600934 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
22 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000288_7 | HDL cholesterol | 6.000000e-11 |
| GCST000817_142 | Height | 2.000000e-08 |
| GCST005580_61 | Intraocular pressure | 3.000000e-12 |
| GCST006585_880 | Blood protein levels | 3.000000e-26 |
| GCST006947_4 | Feeling fed-up | 4.000000e-08 |
| GCST007267_71 | Systolic blood pressure | 1.000000e-10 |
| GCST008075_185 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 4.000000e-09 |
| GCST008075_48 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 7.000000e-14 |
| GCST008084_113 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 1.000000e-49 |
| GCST008084_155 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 1.000000e-39 |
| GCST008085_160 | HDL cholesterol levels in current drinkers | 5.000000e-09 |
| GCST008085_185 | HDL cholesterol levels in current drinkers | 1.000000e-06 |
| GCST009733_165 | Urinary metabolite levels in chronic kidney disease | 3.000000e-96 |
| GCST010241_218 | Apolipoprotein A1 levels | 1.000000e-09 |
| GCST010242_352 | HDL cholesterol levels | 8.000000e-11 |
| GCST010250_1 | Systolic blood pressure x dichotomous lifestyle risk score interaction (2df test) | 7.000000e-07 |
| GCST010989_99 | Body size at age 10 | 3.000000e-08 |
| GCST012020_178 | Serum metabolite levels | 3.000000e-84 |
| GCST012020_179 | Serum metabolite levels | 4.000000e-58 |
| GCST012021_103 | Serum metabolite levels | 3.000000e-84 |
| GCST012021_104 | Serum metabolite levels | 4.000000e-58 |
| GCST012353_37 | Serum metabolite concentrations in chronic kidney disease | 5.000000e-14 |
EFO canonical traits (9, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004695 | intraocular pressure measurement |
| EFO:0009588 | feeling “fed-up” measurement |
| EFO:0006335 | systolic blood pressure |
| EFO:0004329 | alcohol drinking |
| EFO:0005116 | urinary metabolite measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0010724 | lifestyle measurement |
| EFO:0009819 | comparative body size at age 10, self-reported |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1892 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
7 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 316,334 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3578202 | GOZETOTIDE | 4 | 466 |
| CHEMBL4299851 | PIFLUFOLASTAT | 4 | 275 |
| CHEMBL53463 | DOXORUBICIN | 4 | 314,282 |
| CHEMBL3427435 | CTT-1057 | 3 | 32 |
| CHEMBL4594280 | VIPIVOTIDE TETRAXETAN | 2 | 971 |
| CHEMBL496748 | IOFOLASTAT | 2 | 58 |
| CHEMBL456029 | MIP-1095 | 1 | 250 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs61886492 | Toxicity | 3 | mercaptopurine;methotrexate | Acute lymphoblastic leukemia |
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs61886492 | FOLH1 | 3 | 1.25 | 1 | mercaptopurine;methotrexate |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — M28: Aminopeptidase Y
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| vipivotide tetraxetan | Inhibition | 9.43 | pKi |
| compound 8d [PMID: 15027864] | Inhibition | 8.52 | pKi |
Binding affinities (BindingDB)
167 measured of 186 human assays (187 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| pentanedioic acid analogue, (S)-1 | IC50 | 0.1 nM | |
| US20250213705, Compound 120 | KD | 0.141 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 113 | KD | 0.142 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 102 | KD | 0.157 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 119 | KD | 0.161 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 109 | KD | 0.164 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 103 | KD | 0.169 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 2 | KD | 0.208 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 101 | KD | 0.249 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 110 | KD | 0.252 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 106 | KD | 0.288 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 108 | KD | 0.294 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 114 | KD | 0.294 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| pentanedioic acid analogue, (RS)-1 | IC50 | 0.3 nM | |
| CHEMBL2079731 | KD | 0.3 nM | |
| US20250213705, Compound 104 | KD | 0.346 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 107 | KD | 0.379 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 112 | KD | 0.417 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 78 | KD | 0.43 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 68 | KD | 0.46 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 100 | KD | 0.477 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| CHEMBL2079727 | KD | 0.5 nM | |
| US20250213705, Compound 87 | KD | 0.5 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 111 | KD | 0.512 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 115 | KD | 0.536 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 105 | IC50 | 0.551 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 71 | KD | 0.56 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 12 | KD | 0.568 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 67 | KD | 0.6 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| (2S)-2-[[(1S)-1-carboxy-5-[6-[[1-(2-fluoroethyl)triazol-4-yl]methoxy]-2-oxo-3H-benzimidazol-1-yl]pentyl]carbamoylamino]pentanedioic acid | KI | 0.63 nM | US-10894807: PSMA imaging agents |
| US20250213705, Compound 8 | KD | 0.654 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| Boc-AdamGPI Trimer | KD | 0.7 nM | |
| US20250213705, Compound 99 | KD | 0.73 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| 5-[((S)-3-{3-[5-tert-Butoxycarbonylamino-3,7-bis-(2-{(S)-1-carboxy-3-[(2,4-dicarboxy-butyl)-hydroxy-phosphinoyl]-propylcarbamoyl}-ethyl)-adamantan-1-yl]-propionylamino}-3-carboxy-propyl)-hydroxy-phosphinoyl]-4-carboxy-pentanoic acid | KD | 0.8 nM | |
| US20250213705, Compound 34 | KD | 0.85 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 64 | KD | 0.92 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 74 | KD | 0.92 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 59 | KD | 0.98 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 69 | KD | 0.98 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 36 | KD | 0.996 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 92 | KD | 1.01 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 84 | KD | 1.05 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 37 | KD | 1.07 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 39 | KD | 1.08 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 61 | KD | 1.1 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 62 | KD | 1.11 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 52 | KD | 1.12 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 55 | KD | 1.15 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 56 | KD | 1.15 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
| US20250213705, Compound 86 | KD | 1.17 nM | US-20250213705: PSMA TARGETING LIGANDS AND METHODS OF USE |
ChEMBL bioactivities
671 potent at pChembl≥5 of 693 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | Ki | 0.01 | nM | CHEMBL510924 |
| 11.00 | Ki | 0.01 | nM | CHEMBL6007312 |
| 10.77 | Ki | 0.017 | nM | CHEMBL5866602 |
| 10.74 | Ki | 0.018 | nM | GOZETOTIDE |
| 10.70 | Ki | 0.02 | nM | CHEMBL5786057 |
| 10.68 | IC50 | 0.021 | nM | CHEMBL510924 |
| 10.52 | Ki | 0.03 | nM | CHEMBL5994140 |
| 10.46 | Ki | 0.035 | nM | CHEMBL5848906 |
| 10.44 | Ki | 0.036 | nM | CHEMBL6010838 |
| 10.35 | Ki | 0.0449 | nM | CHEMBL3309678 |
| 10.35 | Ki | 0.045 | nM | CHEMBL3309678 |
| 10.31 | Ki | 0.049 | nM | CHEMBL3578199 |
| 10.30 | Ki | 0.05 | nM | CHEMBL510924 |
| 10.15 | Ki | 0.071 | nM | CHEMBL3578197 |
| 10.15 | Ki | 0.07 | nM | CHEMBL5786590 |
| 10.12 | IC50 | 0.075 | nM | CHEMBL4284995 |
| 10.04 | IC50 | 0.091 | nM | TUBULYSIN B |
| 10.00 | Ki | 0.1 | nM | CHEMBL189217 |
| 10.00 | Ki | 0.1 | nM | CHEMBL5753520 |
| 9.96 | Ki | 0.11 | nM | CHEMBL3578200 |
| 9.92 | Ki | 0.12 | nM | CHEMBL5743096 |
| 9.89 | IC50 | 0.13 | nM | CHEMBL4280968 |
| 9.85 | Ki | 0.14 | nM | CHEMBL4211875 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL4286872 |
| 9.80 | Ki | 0.16 | nM | CHEMBL5873627 |
| 9.77 | Ki | 0.17 | nM | CHEMBL3311268 |
| 9.76 | Ki | 0.174 | nM | CHEMBL3311268 |
| 9.71 | Ki | 0.194 | nM | CHEMBL454897 |
| 9.70 | Ki | 0.2 | nM | CHEMBL47009 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL4288368 |
| 9.70 | Kd | 0.2 | nM | CHEMBL2079731 |
| 9.70 | Kd | 0.2 | nM | CHEMBL508430 |
| 9.70 | Ki | 0.2 | nM | CHEMBL6015887 |
| 9.70 | Ki | 0.2 | nM | CHEMBL5795495 |
| 9.70 | Ki | 0.2 | nM | CHEMBL5798260 |
| 9.70 | Ki | 0.2 | nM | CHEMBL6050284 |
| 9.66 | Ki | 0.221 | nM | CHEMBL3309680 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL510924 |
| 9.59 | Ki | 0.256 | nM | CHEMBL454897 |
| 9.59 | Ki | 0.26 | nM | CHEMBL5872050 |
| 9.58 | Ki | 0.265 | nM | CHEMBL5876702 |
| 9.58 | Ki | 0.265 | nM | CHEMBL5932456 |
| 9.57 | Ki | 0.268 | nM | CHEMBL3309676 |
| 9.55 | Ki | 0.28 | nM | CHEMBL47009 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL4277729 |
| 9.52 | IC50 | 0.3 | nM | CHEMBL47009 |
| 9.52 | Ki | 0.3 | nM | CHEMBL47009 |
| 9.52 | Kd | 0.3 | nM | CHEMBL2079731 |
| 9.52 | Kd | 0.3 | nM | CHEMBL508430 |
| 9.52 | Ki | 0.3 | nM | CHEMBL189217 |
PubChem BioAssay actives
513 with measured affinity, of 821 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S)-2-[[(1S)-5-[[6-[4-[4-(4-acetylpiperazin-1-yl)phenyl]piperazin-1-yl]pyridine-3-carbonyl]-[(4-bromophenyl)methyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | <0.0001 | uM |
| (2S)-2-[[(1S)-5-[(4-bromophenyl)methyl-[6-[4-[4-[4-[4-carboxy-3-(3-hydroxy-6-oxoxanthen-9-yl)benzoyl]piperazin-1-yl]phenyl]piperazin-1-yl]pyridine-3-carbonyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | <0.0001 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(4-iodobenzoyl)amino]pentyl]carbamoylamino]pentanedioic acid | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | <0.0001 | uM |
| Gozetotide | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | <0.0001 | uM |
| (2S)-2-[[(1S)-5-[acetyl-[(4-bromophenyl)methyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | <0.0001 | uM |
| (2S)-2-(phosphonomethyl)pentanedioic acid | 1797656: Microplate GCPII Radioactivity-Based Assay from Article 10.1021/jm049258g: “Enantiospecificity of glutamate carboxypeptidase II inhibition.” | ic50 | 0.0001 | uM |
| (2S)-2-[[(1S)-5-[[6-[4-[4-(4-acetylpiperazin-1-yl)phenyl]piperazin-1-yl]pyridine-3-carbonyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | 0.0001 | uM |
| (2S)-2-[[(1S)-5-[[6-[4-[4-[4-[3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoyl]piperazin-1-yl]phenyl]piperazin-1-yl]pyridine-3-carbonyl]-[(4-bromophenyl)methyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1226540: Inhibition of antiTEV-tagged GCP2 extracellular portion (aa 44-750) (unknown origin) using folyl-di-L-glutamate as substrate by HPLC-based enzymatic assay | ki | 0.0001 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(6-fluoro-3-pyridinyl)-methylamino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0001 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[N-[2-[(6-fluoropyridine-3-carbonyl)amino]ethyl]anilino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0001 | uM |
| 3-[6-[[4-[[(2S)-1,5-bis[[(5S)-5-carboxy-5-[[(1S)-1,3-dicarboxypropyl]carbamoylamino]pentyl]amino]-1,5-dioxopentan-2-yl]amino]-4-oxobutyl]amino]-6-oxohexyl]-2-[(1E,3E,5E)-5-(3-ethyl-1,1-dimethyl-6,8-disulfobenzo[e]indol-2-ylidene)penta-1,3-dienyl]-1,1-dimethyl-8-sulfobenzo[e]indol-3-ium-6-sulfonate | 1374082: Inhibition of PSMA in human LNCaP cell lysates incubated for 2 hrs in presence of N-acetylaspartylglutamate by Amplex red glutamic acid/glutamate oxidase assay | ki | 0.0001 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[N-[2-[(4-fluorobenzoyl)amino]ethyl]anilino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0001 | uM |
| 2-(phosphonomethyl)pentanedioic acid | 74532: In vitro inhibitory activity against glutamate carboxypeptidase II (GCP II) using N-acetyl-L-aspartyl-[3H]L-glutamate as a substrate | ki | 0.0002 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-(4-fluoro-N-methylanilino)-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0002 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(4-fluorobenzoyl)amino]pentyl]carbamoylamino]pentanedioic acid | 409346: Inhibition of PSMA in human LNCaP cell extract using [3H]NAAG by fluorescence-based assay | ki | 0.0002 | uM |
| 2-[[[(3S)-3-[3-[3,5-bis[3-[[(1S)-1-carboxy-3-[2,4-dicarboxybutyl(hydroxy)phosphoryl]propyl]amino]-3-oxopropyl]-7-[(2-methylpropan-2-yl)oxycarbonylamino]-1-adamantyl]propanoylamino]-3-carboxypropyl]-hydroxyphosphoryl]methyl]pentanedioic acid | 411794: Binding affinity to PSMA in human PC3 cells assessed as cell surface binding in Tris-buffered saline buffer | kd | 0.0002 | uM |
| sodium 4-[[[(3S)-3-[3-[3,5-bis[3-[[(1S)-1-carboxy-3-[2,4-dicarboxybutyl(hydroxy)phosphoryl]propyl]amino]-3-oxopropyl]-7-[6-[2-[(E)-2-[(3E)-3-[(2E)-2-(3,3-dimethyl-1H-indol-2-ylidene)ethylidene]-2-(4-sulfonatophenoxy)cyclohexen-1-yl]ethenyl]-3,3-dimethylindol-1-ium-1-yl]hexanoylamino]-1-adamantyl]propanoylamino]-3-carboxypropyl]-hydroxyphosphoryl]methyl]-5-hydroxy-5-oxopentanoate | 411795: Binding affinity to PSMA in human LNCaP cells assessed as cell surface binding in Tris-buffered saline buffer | kd | 0.0002 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)-4-bromophenyl]carbamoylamino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0002 | uM |
| (2S)-2-[[(1S)-5-acetamido-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0002 | uM |
| (2S)-2-[[(1S)-5-[acetyl(benzyl)amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0003 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-(4-fluoroanilino)-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0003 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-(3-fluoroanilino)-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0003 | uM |
| (2S)-2-[[[(2S)-2-carboxy-2-[[(4S)-4-carboxy-4-[6-[[3-carboxy-4-(3-hydroxy-6-oxoxanthen-9-yl)benzoyl]amino]hexanoylamino]butanoyl]amino]ethoxy]-hydroxyphosphoryl]amino]pentanedioic acid | 631983: Inhibition of PSMA using N-[4-(phenylazo)-benzoyl]-glutamyl-gamma-glutamic acid as substrate after 15 mins by HPLC analysis | ic50 | 0.0003 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)-4-bromobenzoyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0003 | uM |
| 3-[6-[3-[bis[2-[4-[[(5S)-5-carboxy-5-[[(1S)-1,3-dicarboxypropyl]carbamoylamino]pentyl]carbamoyl]anilino]-2-oxoethyl]amino]propylamino]-6-oxohexyl]-2-[(1E,3E,5E)-5-(3-ethyl-1,1-dimethyl-6,8-disulfobenzo[e]indol-2-ylidene)penta-1,3-dienyl]-1,1-dimethyl-8-sulfobenzo[e]indol-3-ium-6-sulfonate | 1374082: Inhibition of PSMA in human LNCaP cell lysates incubated for 2 hrs in presence of N-acetylaspartylglutamate by Amplex red glutamic acid/glutamate oxidase assay | ki | 0.0004 | uM |
| (2S)-6-[[3-[[(5S)-5-carboxy-5-[[(1S)-1-carboxy-2-[(2-hydroxy-3,4-dioxocyclobuten-1-yl)amino]ethyl]carbamoylamino]pentyl]carbamoyl]-5-fluorobenzoyl]amino]-2-[[(1S)-1-carboxy-2-[(2-hydroxy-3,4-dioxocyclobuten-1-yl)amino]ethyl]carbamoylamino]hexanoic acid | 1989251: Binding affinity to human recombinant PSMA (unknown origin) assessed as inhibition constant incubated for 60 mins in presence of NAAG | ki | 0.0004 | uM |
| (2S)-6-[[3-[[(5S)-5-carboxy-5-[[(1S)-1-carboxy-2-[(2-hydroxy-3,4-dioxocyclobuten-1-yl)amino]ethyl]carbamoylamino]pentyl]carbamoyl]-5-iodobenzoyl]amino]-2-[[(1S)-1-carboxy-2-[(2-hydroxy-3,4-dioxocyclobuten-1-yl)amino]ethyl]carbamoylamino]hexanoic acid | 1989251: Binding affinity to human recombinant PSMA (unknown origin) assessed as inhibition constant incubated for 60 mins in presence of NAAG | ki | 0.0004 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(5-iodopyridine-3-carbonyl)amino]pentyl]carbamoylamino]pentanedioic acid | 409345: Inhibition of PSMA in human LNCaP cell extract using [3H]NAAG by radiometric assay | ki | 0.0004 | uM |
| 2-[[[(3S)-3-[3-[3,5-bis[3-[[(1S)-1-carboxy-3-[2,4-dicarboxybutyl(hydroxy)phosphoryl]propyl]amino]-3-oxopropyl]-7-[6-[(2-methylpropan-2-yl)oxycarbonylamino]hexanoylamino]-1-adamantyl]propanoylamino]-3-carboxypropyl]-hydroxyphosphoryl]methyl]pentanedioic acid | 411795: Binding affinity to PSMA in human LNCaP cells assessed as cell surface binding in Tris-buffered saline buffer | kd | 0.0004 | uM |
| potassium 5-[[(1S)-1-carboxy-4-[[(1S)-1-carboxy-2-[[[(1S)-1,3-dicarboxypropyl]amino]-hydroxyphosphoryl]oxyethyl]amino]-4-oxobutyl]carbamoyl]-2-(3-hydroxy-6-oxoxanthen-9-yl)benzoate | 631983: Inhibition of PSMA using N-[4-(phenylazo)-benzoyl]-glutamyl-gamma-glutamic acid as substrate after 15 mins by HPLC analysis | ic50 | 0.0004 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)phenyl]carbamoylamino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0004 | uM |
| (2S)-2-[[(1S)-1-carboxy-3-methylbutyl]carbamoylamino]pentanedioic acid | 1515290: Inhibition of N-terminally tagged human recombinant GCP2 (44 to 750 residues) extracellular domain expressed in Drosophila melanogaster S2 cells preincubated for 20 mins followed by [3H]-NAAG addition and measured after 20 mins by liquid scintillation counting assay | ic50 | 0.0005 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(3-fluorophenyl)methyl-methylamino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0005 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[[4-[[[4-[[[4-[[[2-[4,7,10-tris(carboxymethyl)-1,4,7,10-tetrazacyclododec-1-yl]acetyl]amino]methyl]benzoyl]amino]methyl]benzoyl]amino]methyl]benzoyl]amino]pentyl]carbamoylamino]pentanedioic acid | 1949343: Binding affinity to PSMA in human LNCaP cells after 45 mins in presence of 68Ga-labeled PSMA-10 by gamma counting assay | ki | 0.0005 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[[(2S)-3-(4-phenylphenyl)-2-[[2-[4,7,10-tris(carboxymethyl)-1,4,7,10-tetrazacyclododec-1-yl]acetyl]amino]propanoyl]amino]pentyl]carbamoylamino]pentanedioic acid | 1949343: Binding affinity to PSMA in human LNCaP cells after 45 mins in presence of 68Ga-labeled PSMA-10 by gamma counting assay | ki | 0.0005 | uM |
| tetrasodium;4-[[[(3S)-3-[3-[3,5-bis[3-[[(1S)-1-carboxy-3-[2,4-dicarboxybutyl(hydroxy)phosphoryl]propyl]amino]-3-oxopropyl]-7-[6-[6-[2-[(E)-2-[(3E)-3-[(2E)-2-[3,3-dimethyl-5-sulfonato-1-(4-sulfonatobutyl)indol-2-ylidene]ethylidene]-2-(4-sulfonatophenoxy)cyclohexen-1-yl]ethenyl]-3,3-dimethyl-5-sulfonatoindol-1-ium-1-yl]hexanoylamino]hexanoylamino]-1-adamantyl]propanoylamino]-3-carboxypropyl]-hydroxyphosphoryl]methyl]-5-hydroxy-5-oxopentanoate | 411795: Binding affinity to PSMA in human LNCaP cells assessed as cell surface binding in Tris-buffered saline buffer | kd | 0.0005 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)benzoyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0006 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)-4-iodobenzoyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0006 | uM |
| (2S)-2-[[(1S)-1-carboxy-3-methylbutyl]carbamoyloxy]pentanedioic acid | 1515290: Inhibition of N-terminally tagged human recombinant GCP2 (44 to 750 residues) extracellular domain expressed in Drosophila melanogaster S2 cells preincubated for 20 mins followed by [3H]-NAAG addition and measured after 20 mins by liquid scintillation counting assay | ic50 | 0.0006 | uM |
| 3-[6-[[4-[[(5S)-5-carboxy-5-[[(1S)-1,3-dicarboxypropyl]carbamoylamino]pentyl]amino]-4-oxobutyl]amino]-6-oxohexyl]-2-[(1E,3E,5E)-5-(3-ethyl-1,1-dimethyl-6,8-disulfobenzo[e]indol-2-ylidene)penta-1,3-dienyl]-1,1-dimethyl-8-sulfobenzo[e]indol-3-ium-6-sulfonate | 1374082: Inhibition of PSMA in human LNCaP cell lysates incubated for 2 hrs in presence of N-acetylaspartylglutamate by Amplex red glutamic acid/glutamate oxidase assay | ki | 0.0006 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(4-fluorophenyl)methyl-methylamino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0006 | uM |
| potassium [(2S)-2-[[(4S)-4-amino-4-carboxybutanoyl]amino]-2-carboxyethyl] [(1S)-1,3-dicarboxypropyl] phosphate | 538387: Inhibition of PSMA in human LNCaP cells | ic50 | 0.0006 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)-4-chlorobenzoyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0007 | uM |
| (4E)-4-[[1-[6-[[(5S)-5-carboxy-5-[[(1S)-1,3-dicarboxypropyl]carbamoylamino]pentyl]amino]-6-oxohexyl]-3,3-dimethylindol-1-ium-2-yl]methylidene]-2-[(Z)-[1-[6-[[(5S)-5-carboxy-5-[[(1S)-1,3-dicarboxypropyl]carbamoylamino]pentyl]amino]-6-oxohexyl]-3,3-dimethylindol-2-ylidene]methyl]-3-oxocyclobuten-1-olate | 1989250: Binding affinity to PSMA (unknown origin) assessed as inhibition constant | ki | 0.0007 | uM |
| tetralithium;(2S)-2-(phosphonatoamino)pentanedioate | 309919: Inhibition of PSMA | ic50 | 0.0009 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[2-[(4-fluorobenzoyl)amino]ethylamino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0009 | uM |
| (2S)-2-[[(1S)-1-carboxy-2-[(2-hydroxy-3,4-dioxocyclobuten-1-yl)amino]ethyl]carbamoylamino]-6-[(4-fluorobenzoyl)amino]hexanoic acid | 1989251: Binding affinity to human recombinant PSMA (unknown origin) assessed as inhibition constant incubated for 60 mins in presence of NAAG | ki | 0.0009 | uM |
| (2S)-2-[[(1S)-1-carboxy-4-[(4-fluorobenzoyl)amino]butyl]carbamoylamino]pentanedioic acid | 1989251: Binding affinity to human recombinant PSMA (unknown origin) assessed as inhibition constant incubated for 60 mins in presence of NAAG | ki | 0.0009 | uM |
| (2S)-2-[[(1S)-5-[[2-(2-acetamidoethoxy)-4-fluorobenzoyl]amino]-1-carboxypentyl]carbamoylamino]pentanedioic acid | 1180461: Inhibition of human recombinant N-terminal Avi-tagged glutamate carboxypeptidase 2 extracellular domain (44 to 750 amino acids) using pteroyl-di-L-glutamate substrate by HPLC method | ki | 0.0010 | uM |
| (2S)-2-[[(1S)-1-carboxy-5-[(6-fluoro-3-pyridinyl)amino]-5-oxopentyl]carbamoylamino]pentanedioic acid | 1423726: Inhibition of recombinant human PSMA using [3H]NAAG as substrate preincubated for 15 mins followed by substrate addition measured after 20 mins by liquid scintillation method | ic50 | 0.0010 | uM |
CTD chemical–gene interactions
37 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Metribolone | affects expression, decreases expression, decreases reaction, affects cotreatment | 5 |
| Cyclosporine | decreases expression, increases expression | 3 |
| Arsenic | affects response to substance, affects reaction, affects abundance, affects metabolic processing | 2 |
| tetramethrin | decreases expression | 1 |
| phentin acetate | increases expression | 1 |
| arsenite | increases methylation | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | affects cotreatment, affects expression | 1 |
| sodium arsenite | decreases expression | 1 |
| monomethylarsonic acid | affects abundance, affects metabolic processing, affects response to substance | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| isospaglumic acid | affects binding, decreases reaction | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| acyline | increases expression | 1 |
| difenoconazole | increases expression | 1 |
| bombesin (7-14) | affects binding, decreases reaction | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | increases expression | 1 |
| 1,2-dibromo-4-(1,2-dibromoethyl)cyclohexane | decreases reaction, increases expression, decreases expression | 1 |
| 2-(3-(1,3-dicarboxypropyl)ureido)pentanedioic acid | decreases reaction, affects binding | 1 |
| 1-(1,3-carboxypropyl)-4,7-carboxymethyl-1,4,7-triazacyclononane | decreases reaction, affects binding | 1 |
| Benzo(a)pyrene | decreases methylation, increases methylation | 1 |
| Calcitriol | affects reaction, decreases expression | 1 |
| Copper | affects binding, decreases reaction | 1 |
| Dichlorodiphenyl Dichloroethylene | decreases reaction, increases expression, decreases expression | 1 |
| DDT | decreases expression, decreases reaction, increases expression | 1 |
| Endosulfan | affects cotreatment, decreases expression | 1 |
| Nickel | decreases expression | 1 |
| Oxygen | increases expression | 1 |
| Pentobarbital | increases response to substance | 1 |
| Selenium | affects cotreatment, decreases expression | 1 |
| Silicon Dioxide | decreases expression | 1 |
ChEMBL screening assays
139 unique, capped per target: 131 binding, 7 admet, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1020694 | Binding | Binding affinity to PSMA in human PC3 cells assessed as cell surface binding in Tris-buffered saline buffer | Multivalent scaffolds for affinity maturation of small molecule cell surface binders and their application to prostate tumor targeting. — J Med Chem |
| CHEMBL4393043 | ADMET | Binding affinity to PSMA in human LNCAP cells assessed as doxorubicin release in cytoplasm measured after 48 hrs | Synthesis and biological evaluation of Doxorubicin-containing conjugate targeting PSMA. — Bioorg Med Chem Lett |
| CHEMBL765765 | Functional | Concentration required for inhibition of 50% of the cleavage of para-nitroanilide from MeO-Suc-Arg-Pro-Tyr-pNA.HCl by Prostate specific antigen PSA | Design and synthesis of novel monocyclic -lactam inhibitors of prostate specific antigen — Bioorg Med Chem Lett |
Cellosaurus cell lines
8 cell lines: 6 cancer cell line, 1 spontaneously immortalized cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B8G7 | Abcam HCT 116 FOLH1 KO | Cancer cell line | Male |
| CVCL_B9IG | Abcam A-549 FOLH1 KO | Cancer cell line | Male |
| CVCL_D3N6 | PC-3 9-7-11 | Cancer cell line | Male |
| CVCL_E6QG | Genomeditech CHO-K1 H_FOLH1(PSMA) | Spontaneously immortalized cell line | Female |
| CVCL_E9XK | PC3-PIP | Cancer cell line | Male |
| CVCL_E9XY | PC3-FOLH1 | Cancer cell line | Male |
| CVCL_SN83 | HAP1 FOLH1 (-) | Cancer cell line | Male |
| CVCL_UE40 | 293T human FOLH1 | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.