FOXN3-AS1

Summary

FOXN3-AS1 (FOXN3 antisense RNA 1, HGNC:44290) is a long non-coding RNA gene on chromosome 14q32.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44290
Approved symbol	FOXN3-AS1
Name	FOXN3 antisense RNA 1
Location	14q32.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258920
Ensembl biotype	lncRNA
Entrez	400236
RNAcentral	URS000075E2C1 — lncRNA, 1086 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000555562

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000555562 — 2 exons

Exon	Start	End
ENSE00002482842	89417354	89417796
ENSE00002523154	89419160	89419793

Expression profiles

Bgee: expression breadth ubiquitous, 172 present calls, max score 81.40.

Top tissues by expression

246 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tibialis anterior	UBERON:0001385	81.40	silver quality
cardiac muscle of right atrium	UBERON:0003379	79.14	gold quality
left ventricle myocardium	UBERON:0006566	79.13	gold quality
ileal mucosa	UBERON:0000331	77.91	gold quality
pancreatic ductal cell	CL:0002079	77.53	silver quality
epithelial cell of pancreas	CL:0000083	75.71	gold quality
right adrenal gland	UBERON:0001233	75.07	gold quality
left adrenal gland	UBERON:0001234	74.64	gold quality
left adrenal gland cortex	UBERON:0035825	74.43	gold quality
right adrenal gland cortex	UBERON:0035827	74.18	gold quality
apex of heart	UBERON:0002098	73.80	gold quality
left coronary artery	UBERON:0001626	73.37	gold quality
monocyte	CL:0000576	73.36	gold quality
lower esophagus mucosa	UBERON:0035834	73.33	gold quality
adrenal cortex	UBERON:0001235	73.26	gold quality
adrenal gland	UBERON:0002369	73.16	gold quality
leukocyte	CL:0000738	73.12	gold quality
right coronary artery	UBERON:0001625	72.76	gold quality
coronary artery	UBERON:0001621	72.55	gold quality
ascending aorta	UBERON:0001496	72.29	gold quality
thoracic aorta	UBERON:0001515	72.29	gold quality
esophagus mucosa	UBERON:0002469	72.15	gold quality
omental fat pad	UBERON:0010414	72.10	gold quality
peritoneum	UBERON:0002358	72.06	gold quality
myocardium	UBERON:0002349	71.75	gold quality
adipose tissue of abdominal region	UBERON:0007808	71.66	gold quality
esophagus	UBERON:0001043	71.59	gold quality
descending thoracic aorta	UBERON:0002345	71.55	gold quality
lower esophagus	UBERON:0013473	71.44	gold quality
lower esophagus muscularis layer	UBERON:0035833	71.42	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.41

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.