FOXN3-AS4

Summary

FOXN3-AS4 (FOXN3 antisense RNA 4, HGNC:58288) is a long non-coding RNA gene on chromosome 14q31.3-q32.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58288
Approved symbol	FOXN3-AS4
Name	FOXN3 antisense RNA 4
Location	14q31.3-q32.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258380
Ensembl biotype	lncRNA
Entrez	139432806
RNAcentral	URS0000335E2A — lncRNA, 341 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000556383

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000556383 — 2 exons

Exon	Start	End
ENSE00002454866	89409277	89409469
ENSE00002482537	89399995	89400142

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 87.99.

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.99	silver quality
skeletal muscle tissue	UBERON:0001134	73.60	gold quality
bone marrow cell	CL:0002092	71.95	silver quality
sural nerve	UBERON:0015488	70.20	gold quality
adrenal tissue	UBERON:0018303	68.72	gold quality
bone marrow	UBERON:0002371	68.04	gold quality
urinary bladder	UBERON:0001255	66.50	silver quality
liver	UBERON:0002107	66.11	gold quality
tonsil	UBERON:0002372	66.03	gold quality
blood	UBERON:0000178	63.14	gold quality
monocyte	CL:0000576	62.08	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.43	gold quality
calcaneal tendon	UBERON:0003701	60.38	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.96	gold quality
corpus callosum	UBERON:0002336	58.89	gold quality
islet of Langerhans	UBERON:0000006	58.84	gold quality
vermiform appendix	UBERON:0001154	58.19	gold quality
muscle of leg	UBERON:0001383	57.14	gold quality
stomach	UBERON:0000945	56.98	gold quality
endometrium	UBERON:0001295	56.59	gold quality
cortex of kidney	UBERON:0001225	56.52	gold quality
uterine cervix	UBERON:0000002	55.72	gold quality
gastrocnemius	UBERON:0001388	54.63	gold quality
kidney	UBERON:0002113	54.17	gold quality
pancreas	UBERON:0001264	53.68	gold quality
heart left ventricle	UBERON:0002084	53.18	gold quality
adrenal gland	UBERON:0002369	53.13	gold quality
skin of abdomen	UBERON:0001416	52.58	gold quality
heart	UBERON:0000948	52.52	gold quality
right lobe of liver	UBERON:0001114	52.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.