FOXO6-AS1

Summary

FOXO6-AS1 (FOXO6 antisense RNA 1, HGNC:41066) is a long non-coding RNA gene on chromosome 1p34.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41066
Approved symbol	FOXO6-AS1
Name	FOXO6 antisense RNA 1
Location	1p34.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229901
Ensembl biotype	lncRNA
Entrez	101929901
RNAcentral	URS0000202FF1 — lncRNA, 394 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000429109

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429109 — 2 exons

Exon	Start	End
ENSE00001606581	41375004	41375252
ENSE00001801673	41375525	41375669

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 88.85.

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	88.85	gold quality
skeletal muscle tissue	UBERON:0001134	83.57	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.17	gold quality
sural nerve	UBERON:0015488	80.99	gold quality
thyroid gland	UBERON:0002046	79.94	gold quality
right lobe of thyroid gland	UBERON:0001119	79.93	gold quality
left lobe of thyroid gland	UBERON:0001120	79.34	gold quality
prostate gland	UBERON:0002367	74.74	gold quality
body of uterus	UBERON:0009853	74.13	gold quality
fundus of stomach	UBERON:0001160	74.11	gold quality
cortical plate	UBERON:0005343	73.99	gold quality
left ovary	UBERON:0002119	73.40	gold quality
myometrium	UBERON:0001296	73.33	gold quality
muscle tissue	UBERON:0002385	72.94	gold quality
ovary	UBERON:0000992	72.56	gold quality
right coronary artery	UBERON:0001625	72.47	gold quality
left uterine tube	UBERON:0001303	71.95	gold quality
right ovary	UBERON:0002118	71.79	gold quality
lower esophagus muscularis layer	UBERON:0035833	71.02	gold quality
lower esophagus	UBERON:0013473	71.01	gold quality
ganglionic eminence	UBERON:0004023	70.99	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	70.89	gold quality
muscle layer of sigmoid colon	UBERON:0035805	69.61	gold quality
pituitary gland	UBERON:0000007	68.42	gold quality
adenohypophysis	UBERON:0002196	68.33	gold quality
ascending aorta	UBERON:0001496	68.19	gold quality
body of pancreas	UBERON:0001150	68.02	gold quality
fallopian tube	UBERON:0003889	67.96	gold quality
endocervix	UBERON:0000458	67.68	gold quality
thoracic aorta	UBERON:0001515	67.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.