FOXP1-DT

Summary

FOXP1-DT (FOXP1 divergent transcript, HGNC:56284) is a long non-coding RNA gene on chromosome 3p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56284
Approved symbol	FOXP1-DT
Name	FOXP1 divergent transcript
Location	3p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000270562
Ensembl biotype	lncRNA
Entrez	126568846
RNAcentral	URS00004F4958 — lncRNA, 2467 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000604491, ENST00000850463

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000604491 — 2 exons

Exon	Start	End
ENSE00004281925	71584674	71587409
ENSE00004281926	71584048	71584125

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 74.23.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	74.23	gold quality
bone marrow cell	CL:0002092	72.95	silver quality
skeletal muscle tissue	UBERON:0001134	69.84	silver quality
lower esophagus muscularis layer	UBERON:0035833	68.06	gold quality
lower esophagus	UBERON:0013473	68.03	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	67.88	gold quality
cortical plate	UBERON:0005343	66.64	gold quality
calcaneal tendon	UBERON:0003701	66.44	gold quality
granulocyte	CL:0000094	65.51	gold quality
quadriceps femoris	UBERON:0001377	65.49	gold quality
descending thoracic aorta	UBERON:0002345	64.66	gold quality
cerebellar vermis	UBERON:0004720	64.61	gold quality
right uterine tube	UBERON:0001302	64.45	gold quality
ascending aorta	UBERON:0001496	64.19	gold quality
thoracic aorta	UBERON:0001515	64.09	gold quality
prostate gland	UBERON:0002367	64.07	gold quality
blood	UBERON:0000178	63.82	gold quality
muscle layer of sigmoid colon	UBERON:0035805	61.88	gold quality
bone marrow	UBERON:0002371	61.84	gold quality
thyroid gland	UBERON:0002046	61.77	gold quality
esophagus	UBERON:0001043	61.75	gold quality
stromal cell of endometrium	CL:0002255	61.72	gold quality
right lobe of thyroid gland	UBERON:0001119	61.50	gold quality
endometrium	UBERON:0001295	61.47	gold quality
left lobe of thyroid gland	UBERON:0001120	61.44	gold quality
lower esophagus mucosa	UBERON:0035834	61.01	gold quality
tonsil	UBERON:0002372	60.33	gold quality
putamen	UBERON:0001874	59.86	gold quality
popliteal artery	UBERON:0002250	59.68	gold quality
caudate nucleus	UBERON:0001873	59.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.20

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.