FXYD6-AS1

Summary

FXYD6-AS1 (FXYD6 antisense RNA 1, HGNC:56067) is a long non-coding RNA gene on chromosome 11q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56067
Approved symbol	FXYD6-AS1
Name	FXYD6 antisense RNA 1
Location	11q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254528
Ensembl biotype	lncRNA
Entrez	123706543
RNAcentral	URS00026A1E84 — lncRNA, 1730 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000525260, ENST00000534150, ENST00000581173

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525260 — 3 exons

Exon	Start	End
ENSE00002143130	117837168	117837655
ENSE00002175115	117833893	117834061
ENSE00004139056	117836269	117836502

Expression profiles

Bgee: expression breadth ubiquitous, 159 present calls, max score 87.19.

Top tissues by expression

246 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
metanephros cortex	UBERON:0010533	87.19	gold quality
islet of Langerhans	UBERON:0000006	87.16	gold quality
right ovary	UBERON:0002118	85.53	gold quality
right hemisphere of cerebellum	UBERON:0014890	85.09	gold quality
left ovary	UBERON:0002119	84.39	gold quality
cerebellar hemisphere	UBERON:0002245	83.74	gold quality
cerebellar cortex	UBERON:0002129	83.37	gold quality
adult mammalian kidney	UBERON:0000082	83.12	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.85	gold quality
body of uterus	UBERON:0009853	81.37	gold quality
cortical plate	UBERON:0005343	81.05	gold quality
cerebellum	UBERON:0002037	80.27	gold quality
muscle layer of sigmoid colon	UBERON:0035805	79.90	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.81	silver quality
pancreas	UBERON:0001264	78.74	gold quality
left uterine tube	UBERON:0001303	78.68	gold quality
right uterine tube	UBERON:0001302	78.21	gold quality
apex of heart	UBERON:0002098	77.62	gold quality
right frontal lobe	UBERON:0002810	76.73	gold quality
ovary	UBERON:0000992	76.72	gold quality
adenohypophysis	UBERON:0002196	76.38	gold quality
body of pancreas	UBERON:0001150	76.23	gold quality
ganglionic eminence	UBERON:0004023	75.58	gold quality
spleen	UBERON:0002106	75.42	gold quality
ventricular zone	UBERON:0003053	74.93	gold quality
pituitary gland	UBERON:0000007	74.63	gold quality
gall bladder	UBERON:0002110	73.97	gold quality
cortex of kidney	UBERON:0001225	73.93	gold quality
kidney	UBERON:0002113	73.44	gold quality
metanephros	UBERON:0000081	73.43	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.02

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.